mRNA_P-littoralis_Contig83.97.3 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig83.97.3 vs. uniprot
Match: D8LK17_ECTSI (Nucleotid_trans domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LK17_ECTSI) HSP 1 Score: 363 bits (932), Expect = 2.480e-122 Identity = 187/335 (55.82%), Postives = 222/335 (66.27%), Query Frame = 1
Query: 25 TLPAITKDATCEDWVAWIPPRSDPAVLMQVVSEAYIDIERNFIRLMERNSALTRHNLFLMCMDDESARFFESSMNIRCIPVSALKLPSHSAIWKLRIKVVSCLVEVGRVDVIMSDADALWLGDPIRELYGSFKAPXXXXXXXXXXXXRGGIHDSDVVASRGSYPKQLGDEWGSTICMGFILLRGGNVAAMKEFLDTMESFVLTTEDDQISINQAVHDLGIVWDKDSDMRYENSTDLGTGTVISLPADAE--------------------GR-------PFSVTLLPHSKYTRRCGTTPISTET-VVAHCFDPRKRADVKTNWIQEENLWFVHENP 945
TLPAITKDATC DW AWIPPRS PAV+MQVVSE YIDIERNFIRLMERNS TR N++LMCMDD S FF++ M IRC+P+SAL LP+H IW+LR++VVSCL+E+G VDVIMSDADALWL DP ++L+ RG D+VASRGS+P EWGST+CMGFIL R NVA MK FLD M V+ +DDQIS+N+A LGIVWDK+SDMRYE ST G G + L GR PF VTLLPHS YTR CG +S +T VVAHC+ P+K A VKT+W+++ NLW V ++P
Sbjct: 26 TLPAITKDATCVDWAAWIPPRSRPAVVMQVVSEGYIDIERNFIRLMERNSGFTRRNIYLMCMDDASKNFFDTKMGIRCVPMSALDLPTHEHIWQLRVRVVSCLLEIGNVDVIMSDADALWLADPAKDLFS-----------------RGDGGRGDIVASRGSWPNDQWKEWGSTLCMGFILFRARNVAGMKRFLDVMADLVVQNKDDQISVNRAAKQLGIVWDKNSDMRYEESTGYGRGIIAGLGTSNNSTSGGGGDLFIGQTGHGVVVGRGTREVEAPFRVTLLPHSAYTRLCGRRTLSNQTTVVAHCYFPQKEAGVKTSWMKKANLWSVQDDP 343
BLAST of mRNA_P-littoralis_Contig83.97.3 vs. uniprot
Match: A0A6H5LI82_9PHAE (Nucleotid_trans domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5LI82_9PHAE) HSP 1 Score: 343 bits (880), Expect = 8.810e-115 Identity = 176/309 (56.96%), Postives = 216/309 (69.90%), Query Frame = 1
Query: 4 HLSSLGPTLPAITKDATCEDWVAWIPPRSDPAVLMQVVSEAYIDIERNFIRLMERNSALTRHNLFLMCMDDESARFFESSMNIRCIPVSALKLPSHSAIWKLRIKVVSCLVEVGRVDVIMSDADALWLGDPIRELYGSFKAPXXXXXXXXXXXXRGGIHDSDVVASRGSYPKQLGDEWGSTICMGFILLRGGNVAAMKEFLDTMESFVLTTEDDQISINQAVHDLGIVWDKDSDMRYENSTDLGTGTVISLPADAEGRPFSVTLLPHSKYTRRCGTTPISTETVVAHCFDPRKRADVKTNWIQEENLWF 930
H ++ LPAIT ATC DW+ WIPPRSDPA++MQVVS Y+++ERNFIRLME NSALTR +L+LMCMD+ S FFESSMNIRCIP++A PSH+ IW LR +VVSCLVE G+ DVIMSDADALWL DP ++ F P + DS VVASRG +PK LG EWG+T+CMGF+L R + EFL+ M++ V +DDQIS+N A +LGIVWD++SDMRY S G GT+ +L D +PFSVTLLPH+ YTR C TPIS +TVVAHC+ P K AD KT W+ + LWF
Sbjct: 27 HGPAVSRRLPAITPKATCADWMKWIPPRSDPAIVMQVVSRHYLELERNFIRLMELNSALTRDHLYLMCMDNVSVHFFESSMNIRCIPLTAFDFPSHAEIWVLRARVVSCLVEAGQ-DVIMSDADALWLDDPFKD----FNLPR--------------VIDSSVVASRGKFPKPLGLEWGATMCMGFVLFRATGRRVVGEFLEVMDALVHKNKDDQISVNLAAENLGIVWDQESDMRYVESDSFGFGTIDTL-VDENNQPFSVTLLPHNAYTRVCDETPISNKTVVAHCWAP-KTADSKTGWMVQSKLWF 314
BLAST of mRNA_P-littoralis_Contig83.97.3 vs. uniprot
Match: A0A6H5JTX9_9PHAE (Nucleotid_trans domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTX9_9PHAE) HSP 1 Score: 288 bits (738), Expect = 6.580e-93 Identity = 162/359 (45.13%), Postives = 198/359 (55.15%), Query Frame = 1
Query: 112 VVSEAYIDIERNFIRLMERNSALTRHNLFLMCMDDESARFFESSMNIRCIPVSALKLPSHSAIWKLRIKVVSCLVEVGRVDVIMSDADALWLGDPIRELYGSFKAPXXXXXXXXXXXXRGGIHDSDVVASRGSYPKQLGDEWGSTICMGFILLRGGNVAAMKEFLDTMESFVLTTEDDQ-----------------------------------------------------ISINQAVHDLGIVWDKDSDMRYENSTDLGTGTVISLPADAE--------------------GR-------PFSVTLLPHSKYTRRCGTTPISTET-VVAHCFDPRKRADVKTNWIQEENLWFVHENP 945
VVSE YIDIERNFIRLMERNS TR N++LMCMD S FF++ M IRC+P+SAL LP+H IW+LR+KVVSCL+EVG VDVIMSDADALWL DP ++L+ RGG D++ASRGS+P + EWGST+CMGFI+ R NVA MK FLD M V+ +DDQ IS+N+A LGIVWDK+SDMRYE ST G G + L + GR PF V LLPHS YTRRCG +S +T VVAHC+ P+K A VKT+W+++ NLW V ++P
Sbjct: 5 VVSEGYIDIERNFIRLMERNSGFTRSNIYLMCMDGASKNFFDAKMGIRCVPMSALDLPTHQDIWQLRVKVVSCLLEVGHVDVIMSDADALWLADPAKDLFS-----------------RGGGGRGDIIASRGSWPNEQSKEWGSTLCMGFIVFRARNVAGMKRFLDVMADLVVQNKDDQMLCECATGVENDFCGFPASSRPRSNPTLTESAFCVAAPSPNASLILSIVSVEKISVNRAAKQLGIVWDKNSDMRYEESTGYGRGVIAGLGSSNNSTSGGGGDLFIGQTGHGVVVGRGTREVEAPFRVILLPHSAYTRRCGRRTLSNQTTVVAHCYFPQKEAGVKTSWMKKANLWSVQDDP 346
BLAST of mRNA_P-littoralis_Contig83.97.3 vs. uniprot
Match: A0A6H5KMQ8_9PHAE (Nucleotid_trans domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMQ8_9PHAE) HSP 1 Score: 249 bits (635), Expect = 2.400e-77 Identity = 134/307 (43.65%), Postives = 185/307 (60.26%), Query Frame = 1
Query: 25 TLPAITKDATCEDWVAWIPPRSDPAVLMQVVSEAYIDIERNFIRLMERNSALTRHNLFLMCMDDESARFFESSMNIRCIPVSALKLP-SHSAIWKLRIKVVSCLVEVGRVDVIMSDADALWLGDPIRELYGSFKAPXXXXXXXXXXXXRGGIHDSDVVASRGSYPKQLGDEWGSTICMGFILLRGGNVAAMKEFLDTMESFVLTTEDDQISINQAVHDLGIVWDKDSDMRYENSTDLGTGTVISLPADAEGRPFSVTLLPHSKYTRRCGTTPISTETVVAHCFDPRKRADVKTNWIQEENLWFVHEN 942
TLP ITKD++C D +AW+PPRS PAV+ QVVSE Y +E NFI ME +S +R NL+L+C+D+ES F+ + IRC+ L P S +W LR++ CL+ G+ DV+MSDADA+WL DP + DS+VVASR P L +WG+T+CMGF R G +AM+ F+ + V DDQ ++N+A+ LG+VWD SDM + NST GTG + ++ A+ G P VTLLPH+KYTR C TPIS +T+VAHC K + T W++E +LW + ++
Sbjct: 60 TLPPITKDSSCSDMLAWLPPRSSPAVVFQVVSEPYASLEANFISNMELHSTFSRENLYLVCLDEESVAIFDG-LGIRCVRYGCLGCPMSRLDVWVLRVEATLCLLNAGQ-DVLMSDADAIWLRDPTNDFASDLNM------------------DSNVVASRAVMPFPLYHKWGATVCMGFAFFRAGG-SAMQAFMTVVGEIVNELGDDQKAVNEALDKLGVVWDPTSDMDFTNSTRPGTGVIENITAN--GDPLKVTLLPHNKYTRSCRRTPISNDTIVAHCVSSDKGEGMAT-WMKEAHLWNLPDD 342
BLAST of mRNA_P-littoralis_Contig83.97.3 vs. uniprot
Match: D7FGV6_ECTSI (Acetyltransferase (Isoleucine patch superfamily protein) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FGV6_ECTSI) HSP 1 Score: 246 bits (628), Expect = 2.360e-75 Identity = 135/307 (43.97%), Postives = 185/307 (60.26%), Query Frame = 1
Query: 25 TLPAITKDATCEDWVAWIPPRSDPAVLMQVVSEAYIDIERNFIRLMERNSALTRHNLFLMCMDDESARFFESSMNIRCIPVSALKLP-SHSAIWKLRIKVVSCLVEVGRVDVIMSDADALWLGDPIRELYGSFKAPXXXXXXXXXXXXRGGIHDSDVVASRGSYPKQLGDEWGSTICMGFILLRGGNVAAMKEFLDTMESFVLTTEDDQISINQAVHDLGIVWDKDSDMRYENSTDLGTGTVISLPADAEGRPFSVTLLPHSKYTRRCGTTPISTETVVAHCFDPRKRADVKTNWIQEENLWFVHEN 942
TLP ITKD++C D +AW+PPRS PAV+ QVVSE Y +E NFI ME +S +R NL+L+C+D+ES F+ + IRC+ L P S IW LRI V CL+ G+ DV+MSDADA+WL DP +L DS+VVASR P L +WG+TICMGF R G +AM+ F+ +E +DQI++N+A++ L +VWD SDM + ++T GTG + ++ D G VTLLPH+KYTR C TPIS +T+VAHC K + T W++E +LW + ++
Sbjct: 135 TLPPITKDSSCSDMLAWLPPRSSPAVVFQVVSEPYASLEENFISNMELHSTFSRENLYLVCLDEESVAIFDG-LGIRCVRYGCLGCPVSRGDIWVLRIDVTICLLNAGQ-DVLMSDADAIWLRDPTDDLASD------------------AFLDSNVVASRAVMPFPLYHKWGATICMGFAFFRAGG-SAMQAFMTVVEEIANELGNDQIAVNEALNKLDVVWDPMSDMNFTDNTRPGTGVIENITVD--GGSLKVTLLPHNKYTRSCRRTPISNDTIVAHCVSSDKGEGMAT-WMKEAHLWNLPDD 417
BLAST of mRNA_P-littoralis_Contig83.97.3 vs. uniprot
Match: D8LSV3_ECTSI (Nucleotid_trans domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LSV3_ECTSI) HSP 1 Score: 238 bits (608), Expect = 1.340e-72 Identity = 130/307 (42.35%), Postives = 189/307 (61.56%), Query Frame = 1
Query: 25 TLPAITKDATCEDWVAWIPPRSDPAVLMQVVSEAYIDIERNFIRLMERNSALTRHNLFLMCMDDESARFFESSMNIRCIPVSALKLP-SHSAIWKLRIKVVSCLVEVGRVDVIMSDADALWLGDPIRELYGSFKAPXXXXXXXXXXXXRGGIHDSDVVASRGSYPKQLGDEWGSTICMGFILLRGGNVAAMKEFLDTMESFVLTTEDDQISINQAVHDLGIVWDKDSDMRYENSTDLGTGTVISLPADAEGRPFSVTLLPHSKYTRRCGTTPISTETVVAHCFDPRKRADVKTNWIQEENLWFVHEN 942
TL AI++ A+C D VAW+PP+ PAV+ QVVS+AY+ +++NFI ME +S +R N++L+C+D+ES F ++ IRC+ + P S +W LRI+V CL++ G +DV+MSDADA+WL DP+ + DS +VASRG+ P L WG+TICMGF+L R G+ A+ +F++ + F E+DQ ++N A+ L +VWD SDM + +ST G G V S+ + G +V+LLPH+KYTR C TPIS ETVVAHC K + T W++E +LW V ++
Sbjct: 118 TLLAISRHASCADIVAWLPPQLQPAVVFQVVSKAYVSVQKNFISNMELHSTFSRENMYLICLDEESVESF-GALGIRCVRFGCMGCPVSRHHVWALRIEVSVCLLKAG-IDVLMSDADAVWLHDPMDDFDSD------------------DYRDSSIVASRGAMPVPLFRTWGATICMGFVLFRAGS-NAIYQFMEVVGEFTEELENDQQAVNLALQKLDVVWDPTSDMSFSDSTRSGVGVVNSIYS---GESLTVSLLPHNKYTRSCRRTPISVETVVAHCISTDKGEGMAT-WMKEAHLWNVPDD 399
BLAST of mRNA_P-littoralis_Contig83.97.3 vs. uniprot
Match: D7G4E2_ECTSI (Nucleotid_trans domain-containing protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4E2_ECTSI) HSP 1 Score: 185 bits (470), Expect = 7.540e-54 Identity = 117/307 (38.11%), Postives = 151/307 (49.19%), Query Frame = 1
Query: 28 LPAITKDATCEDWVAWIPPRSDPAVLMQVVSEAYIDIERNFIRLMERNSALTRHNLFLMCMDDESARFFESSMNIRCIPVSALKLPSHSAIWKLRIKVVSCLVEVGRVDVIMSDADALWLGDPIRELYGSFKAPXXXXXXXXXXXXRGGIHDSDVVASRGSYPKQLGDEWGSTICMGFILLRG-GNVAAMKEFLDTMESFVLTTEDDQISINQAVHDLGIVWDK-DSDMRYENSTDLGTGTVISLPADAEGRPFSVTLLPHSKYTRRCGTTPISTETVVAHCFDPRKRADVKTNWIQEENLWFVHEN 942
LPAI+ +A C DW AW+PP S P V+MQV E G DV+MSDADALWL DP+++ F P G+ S +VASRGS+P ++G WG+TICMGFIL R + AM+EF+ M + VL +DDQI++N A DLGIVW++ DSDMRY ST G G + SL +D + +PF+VTLLPHS YTR C +TP+S TVVAHC K K +W+ +LW V E+
Sbjct: 36 LPAISPEAVCADWAAWVPPMSGPTVVMQV--------------------------------------------------------------------------EAGH-DVMMSDADALWLADPMKD----FSLP--------------GVVGSSIVASRGSFPGEVGHVWGATICMGFILFRTTASRVAMREFVTVMNALVLEEKDDQIAVNIAARDLGIVWNQEDSDMRYTESTGFGVGFIDSL-SDDDNQPFTVTLLPHSAYTRICASTPVSNTTVVAHCISS-KTPQSKADWMHRMDLWAVDED 247
BLAST of mRNA_P-littoralis_Contig83.97.3 vs. uniprot
Match: D7FQM0_ECTSI (Nucleotid_trans domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQM0_ECTSI) HSP 1 Score: 159 bits (402), Expect = 7.240e-45 Identity = 83/167 (49.70%), Postives = 109/167 (65.27%), Query Frame = 1
Query: 160 MERNSALTRHNLFLMCMDDESARFFESSMNIRCIPVSALKLPSHSAIWKLRIKVVSCLVEVGRVDVIMSDADALWLGDPIRELYGSFKAPXXXXXXXXXXXXRGGIHDSDVVASRGSYPKQLGDEWGSTICMGFILLRG-GNVAAMKEFLDTMESFVLTTEDDQISI 657
ME ++ TR++L+LMC+DD+S FFES M I CIP+S L + SH IW LR++VVSCL E G DVIMSDADALWL DP+++ F P G+ DS +VASRG PK++G WG+T+CMGFIL R N AM +F+ M + V +EDDQI++
Sbjct: 1 MELRTSFTRNHLYLMCLDDDSLHFFESFMGIHCIPLSGLNISSHEQIWVLRVRVVSCLAEAGH-DVIMSDADALWLADPMKD----FSLP--------------GVIDSSIVASRGKKPKEVGKVWGATMCMGFILFRATANRTAMGKFVTVMNALVFESEDDQIAV 148
BLAST of mRNA_P-littoralis_Contig83.97.3 vs. uniprot
Match: A0A8J6CCA2_DIALT (Nucleotid_trans domain-containing protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6CCA2_DIALT) HSP 1 Score: 108 bits (269), Expect = 1.900e-23 Identity = 90/310 (29.03%), Postives = 142/310 (45.81%), Query Frame = 1
Query: 28 LPAITKD--ATCEDWVAWIPPRSDPAVLMQVVSEAYIDIERNFIRLMERNSALTRHNLFLMCMDDESARFFESSMNIRCIPVSALKLPSHSA-IWKLRIKVVSCLVEVGRVDVIMSDADALWLGDPIRELYGSFKAPXXXXXXXXXXXXRGGIHDSDVVASRGSYPKQLGDEWGSTICMGFILLRGGNV---AAMKEFLDTMESFVLTTEDDQISINQAVHDLGIVWDKDSDMRYENSTDLGTGTVISLPADAEGRPFSVTLLPHSKYTRRCGTTPISTETVVAHCFDPRKRADVKTNWIQEENLWFVHE 939
LP KD A V +P P V+M V++ AY + NFIR + L ++C D +A + + RC +K +A ++ RI V+ LV +GR DV+++D DA+WLGDP+ ++ + + ++ SRG P +WG+++CMGFI RG + AAM + M +DQ N + +VWD+ +R+ +S D GT+ A+A V +LPH Y R C + ++AHC KRA +K + +NLW++ E
Sbjct: 25 LPVALKDTGAPVASLVPPVPGVPRPVVVM-VLNSAYTRVFENFIRAPGAHH-LAAWETHIICTDRATAVSL-AKLGWRC--QDTVKTGRSAAQVYTRRIPYVAHLVHLGR-DVLITDVDAIWLGDPLPDIMAT---------------------QAGIIGSRGRSPHL---DWGASLCMGFIFFRGSDPLVRAAMPVLTEPMR-------EDQTDFNHNMQRERLVWDEGR-VRFVDSIDTSFGTLRPKNANAGHAGLRVAMLPHKSYVRICEDKVDYSTVIIAHCHSRGKRAHLKVQSLGAKNLWYIPE 296
BLAST of mRNA_P-littoralis_Contig83.97.3 vs. uniprot
Match: K0TFP2_THAOC (Nucleotid_trans domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0TFP2_THAOC) HSP 1 Score: 70.1 bits (170), Expect = 1.340e-9 Identity = 73/240 (30.42%), Postives = 111/240 (46.25%), Query Frame = 1
Query: 298 IWKLRIKVVSCLVE-VGRVDVIMSDADALWLGDPIRELYGSFKAPXXXXXXXXXXXXRGGIHDSDVVASRGSYPKQL--------GDEWGSTICMGFILLRGGNVAAMKEFLDTMESFVLTTE-DDQISINQAVH----DLGIVWDKDSDMRYENSTDLGTGTVISLPADAEGRPFSVTLLPHSKYTRRCGTTPISTETV-VAHCFDPR-----------KRADVKTNWIQEENLWFVHE 939
+W LRI+++ ++ ++++I+SDADA+WL DP EL+ S SD++ASRG+YP + + ++C+G+ R N A++ L +E + T DDQ+SIN +H LG W DSD G+ T + + + VT+LP+SK R C +ST TV VAHC R K AD K + ++E L F E
Sbjct: 400 LWPLRIEIMRRVLSGFPQLNIILSDADAIWLQDP-SELWSS--------------------SGSDLIASRGTYPGRSRCAFAYEEDETTPLSVCLGWSYFR--NTEAVRLLLIDLELLLPTLHNDDQLSINCLLHRQYQKLG--WFLDSD---------GSNTQVYRRLGVDFKSIQVTVLPYSKIIRNCEEGFLSTTTVTVAHCHFRRRGIEKRMRISNKNADSKIHTLKE--LGFAKE 603 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig83.97.3 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 14
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig83.97.3 >prot_P-littoralis_Contig83.97.3 ID=prot_P-littoralis_Contig83.97.3|Name=mRNA_P-littoralis_Contig83.97.3|organism=Pylaiella littoralis U1_48|type=polypeptide|length=316bp MHLSSLGPTLPAITKDATCEDWVAWIPPRSDPAVLMQVVSEAYIDIERNFback to top mRNA from alignment at P-littoralis_Contig83:358758..361654+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig83.97.3 ID=mRNA_P-littoralis_Contig83.97.3|Name=mRNA_P-littoralis_Contig83.97.3|organism=Pylaiella littoralis U1_48|type=mRNA|length=2897bp|location=Sequence derived from alignment at P-littoralis_Contig83:358758..361654+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig83:358758..361654+ >mRNA_P-littoralis_Contig83.97.3 ID=mRNA_P-littoralis_Contig83.97.3|Name=mRNA_P-littoralis_Contig83.97.3|organism=Pylaiella littoralis U1_48|type=CDS|length=948bp|location=Sequence derived from alignment at P-littoralis_Contig83:358758..361654+ (Pylaiella littoralis U1_48)back to top |