mRNA_P-littoralis_Contig83.54.3 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig83.54.3
Unique NamemRNA_P-littoralis_Contig83.54.3
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig83.54.3 vs. uniprot
Match: A0A6H5K6L9_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6L9_9PHAE)

HSP 1 Score: 434 bits (1116), Expect = 9.250e-149
Identity = 233/348 (66.95%), Postives = 250/348 (71.84%), Query Frame = 1
Query:   10 FRAKFNNWYQRFRKRRGFTGSIRRRTSVGQKLPTGHEGMAWATVMKLRQALLKRA---------------------------ESVAEQVFEELGNMDQTPVQHEMPVETTLEKRGAKGARISTGGKEKERFTLCLAVMAGGGKVPLRIIFKGTPFIPPTKSGKGKSTQPRKG-----------------------------WCDARECTLWLTESWKLRPNNGSIIKQRPSILVLDDFKCHKDEGFIADLLKRANTIVILIPGGLTPLLQSVDRMLNKQMKRLLRGMYTAHTATAVADTRTGKLKPPGRGQVSTWCKQAWAQITPELVKTCFKICGLTLALDGSEDHA 885
            F+ KFN+WYQRFRKR GF  SIRRRTSVGQKLP G EGMAWATVMKLR+AL+KRA                            SV  +VFEELGNMDQTPVQHE+PVETTLEK GAK ARISTGGKEKERFTL LAVMA G KV  RIIFKGTPF PPT SGKGKST PRK                              W D REC  W++ SWKLRPNNGSI++QRP ILVLDDFKCHKDEGFIA L + ANTIVI IPG LTPLLQ +DRMLNKQMKRLLR  YTA++A+AVAD R+GKLKPP RG VSTWCK+AW   TPE VKTCF ICGLTLALDGSEDHA
Sbjct:   27 FKVKFNSWYQRFRKRNGF--SIRRRTSVGQKLPKGDEGMAWATVMKLREALVKRAGEIYARRHPPAPDESPIKGEDLTSEQLASVEAEVFEELGNMDQTPVQHEIPVETTLEKTGAKDARISTGGKEKERFTLVLAVMADGKKVSPRIIFKGTPFTPPTVSGKGKSTLPRKNSVAWEIHPANRAKHGHPANGMSFGVQEKSWSDQRECNGWISGSWKLRPNNGSIVQQRPCILVLDDFKCHKDEGFIAALKRDANTIVIFIPGRLTPLLQPLDRMLNKQMKRLLRRKYTAYSASAVADARSGKLKPPERGVVSTWCKEAWESSTPETVKTCFMICGLTLALDGSEDHA 372          
BLAST of mRNA_P-littoralis_Contig83.54.3 vs. uniprot
Match: A0A6H5JUK2_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUK2_9PHAE)

HSP 1 Score: 426 bits (1096), Expect = 2.000e-146
Identity = 234/377 (62.07%), Postives = 255/377 (67.64%), Query Frame = 1
Query:   10 FRAKFNNWYQRFRKRRGFTGSIRRRTSVGQKLPTGHEGMAWATVMKLRQALLKRA---------------------------ESVAEQVFEELGNMDQTPVQHEMPVETTLEKRGAKGARISTGGKEKERFTLCLAVMAGGGKVPLRIIFKGTPFIPPTKSGKGKSTQPRKG-----------------------------WCDARECTLWLTESWKLRPNNGSIIKQRPSILVLDDFKCHKDEGFIADLLKRANTIVILIPGGLTPLLQSVDRMLNKQMKRLLRGMYTAHTATAVADTRTGKLKPPGRGQVSTWCKQAWAQITPELV-----------------------------KTCFKICGLTLALDGSEDHA 885
            F+ K N+WYQRFRKR GF  SIRRRTSVGQKLP G+EGMAWATVMKLR+AL++RA                            SV  +VF+ELGNMDQTPVQHEMPVETTLEK GAK ARISTGGKEKERFTL LAVMA G KV  RIIFKGTPFIPP  SGKGKST PRK                              W D REC  W++ SWKLRPNNGSI++QRP ILVLDDFKCHKDEG+IA L + ANTIVI+IPGGLTPLLQ +DRMLNKQMKRLLRG YTA++A+AVAD R+GKLKPP RG VSTWCK+AW  ITPE V                             KTCFKICGLTLALDGSEDHA
Sbjct:   27 FKVKINSWYQRFRKRNGF--SIRRRTSVGQKLPKGYEGMAWATVMKLREALVRRAGEIYARRHPPAPDESPIKGEDLTFEQLASVEAEVFKELGNMDQTPVQHEMPVETTLEKTGAKDARISTGGKEKERFTLVLAVMADGKKVSPRIIFKGTPFIPPAVSGKGKSTLPRKNSVAWEIHPANRAKHDHPANGMSFGVQEKSWSDQRECNGWISGSWKLRPNNGSIVQQRPCILVLDDFKCHKDEGYIAALKRDANTIVIVIPGGLTPLLQPLDRMLNKQMKRLLRGKYTAYSASAVADARSGKLKPPERGVVSTWCKEAWESITPETVSSVRKERFALGDVRAWSGENPACSVXETVKTCFKICGLTLALDGSEDHA 401          
BLAST of mRNA_P-littoralis_Contig83.54.3 vs. uniprot
Match: A0A6H5KE45_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KE45_9PHAE)

HSP 1 Score: 428 bits (1100), Expect = 7.550e-145
Identity = 228/374 (60.96%), Postives = 254/374 (67.91%), Query Frame = 1
Query:   10 FRAKFNNWYQRFRKRRGFTGSIRRRTSVGQKLPTGHEGMAWATVMKLRQALLKRA---------------------------ESVAEQVFEELGNMDQTPVQHEMPVETTLEKRGAKGARISTG--------------------------GKEKERFTLCLAVMAGGGKVPLRIIFKGTPFIPPTKSGKGKSTQPRKG-----------------------------WCDARECTLWLTESWKLRPNNGSIIKQRPSILVLDDFKCHKDEGFIADLLKRANTIVILIPGGLTPLLQSVDRMLNKQMKRLLRGMYTAHTATAVADTRTGKLKPPGRGQVSTWCKQAWAQITPELVKTCFKICGLTLALDGSEDHA 885
            F++KF +WYQRFRKR  F  SIRRRTSVG +LP GHEGMAWAT+MKLR+ALL+RA                           E V +++F++LGNMDQTPVQ+EMPVETTLEK GAK ARI+TG                          GKEKERFTLCLAV A G KVPLRIIFKGTPF+PP   GKGK+TQPRK                              WCD RE  LW+ +SWKLRPNNGS+++QR  ILVLDDFKCHKD+GFIA L + ANTIVI IPGGLTPLLQ +DRMLNKQMKRLLRGMYTAHTA A  D +TGKL PPGRG V+TWCK AWA ITPE VKTCFKICGLTLALDGSEDHA
Sbjct:  114 FKSKFKSWYQRFRKRNKF--SIRRRTSVGIRLPKGHEGMAWATLMKLRKALLERAGEIYAQRYPPAPGESPIRGEDLSSSQLELVTDELFKDLGNMDQTPVQYEMPVETTLEKTGAKDARIATGAGVCCIRTILKPLPYPPTSCILPPPPGKEKERFTLCLAVSADGTKVPLRIIFKGTPFVPPATPGKGKATQPRKNSIAWEVLPANRSKHGLPVGGMSFGVQEKSWCDLREYKLWIKDSWKLRPNNGSVVRQRRCILVLDDFKCHKDDGFIAALKREANTIVIFIPGGLTPLLQPLDRMLNKQMKRLLRGMYTAHTAKAARDPKTGKLAPPGRGAVATWCKNAWASITPETVKTCFKICGLTLALDGSEDHA 485          
BLAST of mRNA_P-littoralis_Contig83.54.3 vs. uniprot
Match: A0A6H5JHT8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHT8_9PHAE)

HSP 1 Score: 426 bits (1094), Expect = 1.500e-142
Identity = 229/350 (65.43%), Postives = 251/350 (71.71%), Query Frame = 1
Query:    7 EFRAKFNNWYQRFRKRRGFTGSIRRRTSVGQKLPTGHEGMAWATVMKLRQALLKRA---------------------------ESVAEQVFEELGNMDQTPVQHEMPVETTLEKRGAKGARISTGG-KEKERFTLCLAVMAGGGKVPLRIIFKGTPFIPPTKSGKGKSTQPRKG-----------------------------WCDARECTLWLTESWKLRPNNGSIIKQRPSILVLDDFKCHKDEGFIADLLKRANTIVILIPGGLTPLLQSVDRMLNKQMKRLLRGMYTAHTATAVADTRTGKLKPPGRGQVSTWCKQAWAQITPELVKTCFKICGLTLALDGSEDHA 885
            +F+ KFN+WYQRFRKR GF  SIRRRTSVGQKLP G+EGMAWATVMKL +AL+KRA                            SV  +VFEE+GNMDQ PVQHEMPVETTL+K GAK ARISTGG  EKERFTL LAV A G KV  RIIF+GTPFIPPT SGKGKST+PRK                              W D REC  W++ SWKLRPNNGSI++QRP ILVLDDFKCH DEGFIA L + ANTIVI IPGGLTPLLQ +DRMLNKQMKRLLRG YTA++ +AVAD R+GKLKPP RG VSTWCK+AW  ITPE VKTC KICGLTLALDGSEDHA
Sbjct:  220 DFKFKFNSWYQRFRKRNGF--SIRRRTSVGQKLPKGYEGMAWATVMKLCEALVKRAGEIYARRHPPAPDESPIKGEDLNSEQLASVEAEVFEEVGNMDQMPVQHEMPVETTLDKTGAKDARISTGGGNEKERFTLVLAVTADGKKVSPRIIFEGTPFIPPTVSGKGKSTRPRKNPVAWEMHPANRAKHGHPANGMSFGVQEKSWSDQRECNGWISGSWKLRPNNGSIVQQRPRILVLDDFKCHNDEGFIAALKRDANTIVIFIPGGLTPLLQPLDRMLNKQMKRLLRGKYTAYSPSAVADARSGKLKPPERGVVSTWCKEAWESITPETVKTCSKICGLTLALDGSEDHA 567          
BLAST of mRNA_P-littoralis_Contig83.54.3 vs. uniprot
Match: A0A6H5JTG5_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTG5_9PHAE)

HSP 1 Score: 416 bits (1069), Expect = 1.210e-139
Identity = 228/356 (64.04%), Postives = 245/356 (68.82%), Query Frame = 1
Query:   10 FRAKFNNWYQRFRKRRGFTGSIRRRTSVGQKLPTGHEGMAWATVMKLRQALLKRA---------------------------ESVAEQVFEELGNMDQTPVQHEMPVETTLEKRGAKGARISTGGKEKERFTLCLAVMAGGGKVPLRIIFKGTPFIPPTKSGKGKSTQPRKG-----------------------------WCDARECTLWLTESWKL--------RPNNGSIIKQRPSILVLDDFKCHKDEGFIADLLKRANTIVILIPGGLTPLLQSVDRMLNKQMKRLLRGMYTAHTATAVADTRTGKLKPPGRGQVSTWCKQAWAQITPELVKTCFKICGLTLALDGSEDHA 885
            F+ KFN+WYQRFRKR GF  SIRRR SVGQKLP G+EGMAWATV KLR+AL+KRA                            SV  +VFEELGNMDQTPVQHEMPVETTLE  G K ARISTGGKEKERFTL LAVMA G  V   IIFKGTPFIPPT SGKGKST PRK                              W   +EC  W+  SWKL        RPNNGSI++QRP ILVLDDFKCHKDEGFIA L + ANTIVI IPGGLTPLLQ +DRMLNKQMKRLLRG YTA++A AVAD R+GKLKPP RG VSTWCK+AW  +T E V TCFKICGLTLALDGSEDHA
Sbjct:  181 FKVKFNSWYQRFRKRNGF--SIRRRASVGQKLPKGYEGMAWATVTKLREALVKRAGEIYARRHPPAPDESPIKGEDLTSEQPASVEAEVFEELGNMDQTPVQHEMPVETTLEDTGGKDARISTGGKEKERFTLVLAVMADGKMVSPCIIFKGTPFIPPTVSGKGKSTLPRKNSVAWEVHPANRAKHGHPANGMSFGVQEKSWSGQQECNGWIPGSWKLCPNNGSMXRPNNGSIVQQRPCILVLDDFKCHKDEGFIAALNRDANTIVIFIPGGLTPLLQPLDRMLNKQMKRLLRGKYTAYSAPAVADARSGKLKPPERGVVSTWCKEAWEFVTSETVNTCFKICGLTLALDGSEDHA 534          
BLAST of mRNA_P-littoralis_Contig83.54.3 vs. uniprot
Match: A0A6H5K8Y4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8Y4_9PHAE)

HSP 1 Score: 428 bits (1101), Expect = 1.380e-138
Identity = 222/338 (65.68%), Postives = 243/338 (71.89%), Query Frame = 1
Query:   16 AKFNNWYQRFRKRRGFTGSIRRRTSVGQKLPTGHEGMAWATVMKLRQALLKRA---------------------------ESVAEQVFEELGNMDQTPVQHEMPVETTLEKRGAKGARISTGGKEKERFTLCLAVMAGGGKVPLRIIFKGTPFIPPTKSGKGKSTQPRKG-----------------------------WCDARECTLWLTESWKLRPNNGSIIKQRPSILVLDDFKCHKDEGFIADLLKRANTIVILIPGGLTPLLQSVDRMLNKQMKRLLRGMYTAHTATAVADTRTGKLKPPGRGQVSTWCKQAWAQITPELVKTCFKICGLTLA 861
            +KF +WYQRF KR  F  SIRRRTSVGQKLP GHEGMAWAT+MKLR+ALL+RA                           E V +++FEELGNMDQTPVQHEMPVETTLE  GAK ARI+TGGKEKERFTLCLAV A G KVPLRIIFKGTPF+PP   GKGK+TQPRK                              WCD REC LW+ +SWKLRPNNGSI++QR  ILVLDDFKCHKD+GFIA L + ANTIVI IPGGL PL Q +DRMLNKQMKRLLRGMYTAHTA A  D +TGKL PPGRG V+TWCK AWA ITPE+VKTCFKICGLTLA
Sbjct:  183 SKFKSWYQRFCKRNKF--SIRRRTSVGQKLPKGHEGMAWATLMKLRKALLERAGEIYAQRYPPAPGESPIRGEDLSSSQLELVTDELFEELGNMDQTPVQHEMPVETTLENTGAKDARIATGGKEKERFTLCLAVSADGKKVPLRIIFKGTPFVPPATPGKGKATQPRKNSIAWEVLPANRSKHGLPVGGMSFGVQEKSWCDLRECKLWIKDSWKLRPNNGSIVRQRRCILVLDDFKCHKDDGFIAALKREANTIVIFIPGGLIPLFQPLDRMLNKQMKRLLRGMYTAHTAKAARDPKTGKLVPPGRGAVATWCKNAWASITPEIVKTCFKICGLTLA 518          
BLAST of mRNA_P-littoralis_Contig83.54.3 vs. uniprot
Match: A0A6H5KRZ8_9PHAE (DDE-1 domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRZ8_9PHAE)

HSP 1 Score: 412 bits (1060), Expect = 1.180e-137
Identity = 228/361 (63.16%), Postives = 246/361 (68.14%), Query Frame = 1
Query:   10 FRAKFNNWYQRFRKRRGFTGSIRRRTSVGQKLPTGHEGMAWATVMKLRQALLKRA---------------------------ESVAEQVFEELGNMDQTPVQHEMPVETTLEKRGAKGARISTGGKEKERFTLCLAVMAGGGKVPLRIIFKGTPFIPPTKSGKGKSTQPRKG------------------------------------------WCDARECTLWLTESWKLRPNNGSIIKQRPSILVLDDFKCHKDEGFIADLLKRANTIVILIPGGLTPLLQSVDRMLNKQMKRLLRGMYTAHTATAVADTRTGKLKPPGRGQVSTWCKQAWAQITPELVKTCFKICGLTLALDGSEDHA 885
            F+ KFN+WYQRFRKR GF  SIRRRTSVGQKLP G+EGMAWATVMKLR+AL+KRA                            SV  +VFEELGNMDQTPVQHEMPVETTLEK GAK ARISTGG+EKERFTL LAVMA G KV  RIIFKGTPFIPPT SGK KST PRK                                           W D REC  W+  SWKLRPNNGSI++QRP ILVLDDFKCHKDEGFIA L + A T VI IPGGLT LLQ +DRMLNKQMKRLLRG YTA +A+AVAD R+GKL PP  G VSTWCK+AW  IT + V+TCFKICGLTLALDGSE HA
Sbjct:  209 FKVKFNSWYQRFRKRNGF--SIRRRTSVGQKLPKGYEGMAWATVMKLREALVKRAGEIYARRHPPAPDESPIKGEDLTSEQLASVEAEVFEELGNMDQTPVQHEMPVETTLEKTGAKDARISTGGEEKERFTLVLAVMADGKKVSPRIIFKGTPFIPPTVSGKVKSTLPRKNSVAWEIHSANXARSGCHGGRQNDVSPRIIFKGTPFIPPTEKSWSDQRECNGWIPGSWKLRPNNGSIVQQRPCILVLDDFKCHKDEGFIAALKRGAKT-VIFIPGGLTSLLQPLDRMLNKQMKRLLRGKYTACSASAVADARSGKLNPPEHGVVSTWCKEAWESITSKTVETCFKICGLTLALDGSEHHA 566          
BLAST of mRNA_P-littoralis_Contig83.54.3 vs. uniprot
Match: A0A6H5JQM5_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQM5_9PHAE)

HSP 1 Score: 399 bits (1024), Expect = 4.620e-133
Identity = 217/348 (62.36%), Postives = 243/348 (69.83%), Query Frame = 1
Query:   10 FRAKFNNWYQRFRKRRGFTGSIRRRTSVGQKLPTGHEGMAWATVMKLRQALLKRA---------------------------ESVAEQVFEELGNMDQTPVQHEMPVETTLEKRGAKGARISTGGKEKERFTLCLAVMAGGGKVPLRIIFKGTPFIPPTKSGKGKSTQPRKG-----------------------------WCDARECTLWLTESWKLRPNNGSIIKQRPSILVLDDFKCHKDEGFIADLLKRANTIVILIPGGLTPLLQSVDRMLNKQMKRLLRGMYTAHTATAVADTRTGKLKPPGRGQVSTWCKQAWAQITPELVKTCFKICGLTLALDGSEDHA 885
            FR KF NWY RFR+R G   SIRRRTSVGQKLPTG+EG+A+AT+MKLR ALL+RA                           ESVA +VFEELGNMDQTPVQ EMPVETTLEK GAK ARISTGGKEKERFTLCLAVMA GGKVPLRIIFKG PFIPP+ + +GK+TQPRKG                             W DA ECTLWL+ESW  RPN+GS+IKQR SILVLDDF              R NT VILIPGGLTPLLQ +DRML+K+MKRL+R  YT + A+A+AD +TGKL+PPGRG VSTWCK++WA IT E VK CFK+CGLTLALDGSED A
Sbjct:  200 FRTKFKNWYHRFRERHGL--SIRRRTSVGQKLPTGYEGLAFATLMKLRTALLERAGEIYARRNPPASGESPIKGKDLSPAQLESVATEVFEELGNMDQTPVQQEMPVETTLEKGGAKDARISTGGKEKERFTLCLAVMADGGKVPLRIIFKGKPFIPPSTARRGKNTQPRKGSIAAEVLPANQTNFGYPVSGMSFGVQERSWYDACECTLWLSESWGFRPNHGSVIKQRHSILVLDDF--------------RTNTTVILIPGGLTPLLQPLDRMLDKEMKRLMRRRYTQYMASAIADPKTGKLQPPGRGLVSTWCKESWAAITAETVKMCFKVCGLTLALDGSEDDA 531          
BLAST of mRNA_P-littoralis_Contig83.54.3 vs. uniprot
Match: A0A6H5KRZ1_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRZ1_9PHAE)

HSP 1 Score: 388 bits (997), Expect = 3.390e-129
Identity = 206/328 (62.80%), Postives = 226/328 (68.90%), Query Frame = 1
Query:   70 SIRRRTSVGQKLPTGHEGMAWATVMKLRQALLKRA---------------------------ESVAEQVFEELGNMDQTPVQHEMPVETTLEKRGAKGARISTGGKEKERFTLCLAVMAGGGKVPLRIIFKGTPFIPPTKSGKGKSTQPRKG-----------------------------WCDARECTLWLTESWKLRPNNGSIIKQRPSILVLDDFKCHKDEGFIADLLKRANTIVILIPGGLTPLLQSVDRMLNKQMKRLLRGMYTAHTATAVADTRTGKLKPPGRGQVSTWCKQAWAQITPELVKTCFKICGLTLALDGSEDHA 885
            +IRR TSVGQKLP GHEGMAWAT+MKLR+ALL+RA                           E V +++FEELGNMDQTPVQHE PVE  L KR  +    S     +ERFTLCLAV A G KVPLRIIFKGTPF+PP   GKGK+TQPRK                              WCD REC LW+ +SWKLRPNNGSI++QR  ILVLDDFKCHKD+GFIA L + ANTIVI IPGGLTPLLQ +DRMLNKQMKRLLRGMYTAHTA A  D +TGKL PPGRG V+TWCK AWA ITPE  KTCFKICGLTLALDGSEDHA
Sbjct:  169 NIRRCTSVGQKLPKGHEGMAWATLMKLRKALLERAGKIYAQRYPPAPGENPIRGEDLSSSQLELVTDELFEELGNMDQTPVQHETPVER-LWKRPVRRMPASP---PEERFTLCLAVSADGKKVPLRIIFKGTPFVPPATPGKGKATQPRKNSIAWEVLPANRSKHGLPVGGMSFGVQEKSWCDLRECKLWIKDSWKLRPNNGSIVRQRRCILVLDDFKCHKDDGFIAALKREANTIVIFIPGGLTPLLQPLDRMLNKQMKRLLRGMYTAHTAKAARDPKTGKLAPPGRGAVATWCKNAWASITPETAKTCFKICGLTLALDGSEDHA 492          
BLAST of mRNA_P-littoralis_Contig83.54.3 vs. uniprot
Match: A0A6H5KEE8_9PHAE (DDE-1 domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEE8_9PHAE)

HSP 1 Score: 385 bits (990), Expect = 4.470e-128
Identity = 207/348 (59.48%), Postives = 227/348 (65.23%), Query Frame = 1
Query:   10 FRAKFNNWYQRFRKRRGFTGSIRRRTSVGQKLPTGHEGMAWATVMKLRQALLKRA---------------------------ESVAEQVFEELGNMDQTPVQHEMPVETTLEKRGAKGARISTGGKEKERFTLCLAVMAGGGKVPLRIIFKGTPFIPPTKSGKGKSTQPRKG-----------------------------WCDARECTLWLTESWKLRPNNGSIIKQRPSILVLDDFKCHKDEGFIADLLKRANTIVILIPGGLTPLLQSVDRMLNKQMKRLLRGMYTAHTATAVADTRTGKLKPPGRGQVSTWCKQAWAQITPELVKTCFKICGLTLALDGSEDHA 885
            F++KF +WYQRFRKR  F  +IRRRTSVGQKLP GHEGMAWAT+MKLR+ALL+RA                           E V +++FEELGNMDQTPVQHE                   GGKEKERFTLCLAV A G KVPLRIIFKGTPF+PP   GKGK+TQPRK                              WCD REC LW+  SWKLRPNNGSI++QR  ILVLDDFKCHKD+GFIA L + ANTIVI IPGGLTPLLQ +DRMLNKQMKRLL               +TGKL PPGRG V+TWCK AWA ITPE VKTCFKICGLTLALDGSEDHA
Sbjct:  168 FKSKFKSWYQRFRKRNKF--NIRRRTSVGQKLPKGHEGMAWATLMKLRKALLERAGEIYAQRYPPAPGESPIRGEDLSSSQLELVTDELFEELGNMDQTPVQHER----------------DAGGKEKERFTLCLAVSADGKKVPLRIIFKGTPFVPPATPGKGKATQPRKNSIAWEVLPANRSKHGLPVEGMSFGVQEKSWCDLRECKLWIKGSWKLRPNNGSIVRQRRCILVLDDFKCHKDDGFIAALKREANTIVIFIPGGLTPLLQLLDRMLNKQMKRLLXXXXXXXXXXXXXXPKTGKLAPPGRGAVATWCKNAWASITPETVKTCFKICGLTLALDGSEDHA 497          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig83.54.3 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K6L9_9PHAE9.250e-14966.95DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5JUK2_9PHAE2.000e-14662.07DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5KE45_9PHAE7.550e-14560.96DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5JHT8_9PHAE1.500e-14265.43Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JTG5_9PHAE1.210e-13964.04DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5K8Y4_9PHAE1.380e-13865.68Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KRZ8_9PHAE1.180e-13763.16DDE-1 domain-containing protein n=3 Tax=Ectocarpus... [more]
A0A6H5JQM5_9PHAE4.620e-13362.36DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5KRZ1_9PHAE3.390e-12962.80DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5KEE8_9PHAE4.470e-12859.48DDE-1 domain-containing protein n=2 Tax=Ectocarpus... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig83contigP-littoralis_Contig83:161793..163283 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D7FXD3
Preferred namePOGK
PFAMsBrkDBD,DDE_1,HTH_Tnp_Tc5,KRAB
Model size885
Max annot lvl2759|Eukaryota
KEGG koko:K09228
Hectar predicted targeting categoryother localisation
Exons4
Evalue2.39e-94
EggNOG OGsKOG3105@1|root,KOG3105@2759|Eukaryota
DescriptionDNA binding
Cds size885
COG categoryCH
BRITEko00000,ko03000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791689.1770685-CDS-P-littoralis_Contig83:161792..1622341680791689.1770685-CDS-P-littoralis_Contig83:161792..162234Pylaiella littoralis U1_48CDSP-littoralis_Contig83 161793..162234 -
1680791689.1889436-CDS-P-littoralis_Contig83:162321..1624631680791689.1889436-CDS-P-littoralis_Contig83:162321..162463Pylaiella littoralis U1_48CDSP-littoralis_Contig83 162322..162463 -
1680791689.2039244-CDS-P-littoralis_Contig83:162901..1630271680791689.2039244-CDS-P-littoralis_Contig83:162901..163027Pylaiella littoralis U1_48CDSP-littoralis_Contig83 162902..163027 -
1680791689.2219381-CDS-P-littoralis_Contig83:163108..1632831680791689.2219381-CDS-P-littoralis_Contig83:163108..163283Pylaiella littoralis U1_48CDSP-littoralis_Contig83 163109..163283 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig83.54.3prot_P-littoralis_Contig83.54.3Pylaiella littoralis U1_48polypeptideP-littoralis_Contig83 161793..163283 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig83.54.3

>prot_P-littoralis_Contig83.54.3 ID=prot_P-littoralis_Contig83.54.3|Name=mRNA_P-littoralis_Contig83.54.3|organism=Pylaiella littoralis U1_48|type=polypeptide|length=295bp
SEEFRAKFNNWYQRFRKRRGFTGSIRRRTSVGQKLPTGHEGMAWATVMKL
RQALLKRAESVAEQVFEELGNMDQTPVQHEMPVETTLEKRGAKGARISTG
GKEKERFTLCLAVMAGGGKVPLRIIFKGTPFIPPTKSGKGKSTQPRKGWC
DARECTLWLTESWKLRPNNGSIIKQRPSILVLDDFKCHKDEGFIADLLKR
ANTIVILIPGGLTPLLQSVDRMLNKQMKRLLRGMYTAHTATAVADTRTGK
LKPPGRGQVSTWCKQAWAQITPELVKTCFKICGLTLALDGSEDHA
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mRNA from alignment at P-littoralis_Contig83:161793..163283-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig83.54.3 ID=mRNA_P-littoralis_Contig83.54.3|Name=mRNA_P-littoralis_Contig83.54.3|organism=Pylaiella littoralis U1_48|type=mRNA|length=1491bp|location=Sequence derived from alignment at P-littoralis_Contig83:161793..163283- (Pylaiella littoralis U1_48)
TCAGAGGAGTTCAGGGCGAAGTTCAACAACTGGTACCAGCGTTTCCGCAA GCGCCGCGGGTTTACCGGTAGTATCCGCCGGCGTACCAGCGTGGGACAGA AGCTGCCCACAGGACACGAGGGCATGGCGTGGGCGACGGTGATGAAGCTT CGGCAGGCTCTCCTGAAGCGTGCTGGTGAGATCTACGAGAAGCGCAACCC ATCTCCGCCCGGCGAGAGCCCCATCAAAGGGGAGGACCTGACTTCCGAGC AGCTAGAGTCGGTGGCCGAGCAAGTTTTCGAAGAACTCGGCAACATGGAC CAGACGCCCGTCCAGCACGAGATGCCGGTCGAGACGACTCTGGAGAAGCG TGGTGCCAAGGGTGCTCGCATCAGCACCGGAGGTACGAGTCTTTTACTGC TGATGTTTTTTTTGTGTACTCGGTATCAGTTTATATTTAGGTCTGCTGCT GTTTATTTTTTGTGTAAAATATTCGGCATCATTTTGTATTTCGTCTACTG CTGTTTATTTTTTGTGTACTCGGAATCATTTTATATTTTTCTACTGCTGT TTATTTTTTGTGTACTCGGCATCAGTTTATATTTTGGTCTGCTGCTGTTT ATTTTTTGTGTAAAATATTCGGCATCATTTTGTTTTTCGTCTACTGCTGT TTATTTTTGTGTACTCGGCATCATTTTATATTTTGGTCTGCTGCTGTTTA ATTTTTTAATGCTGTTGTTTGTCGGTGTTTGGTCTCTCTCTCATCCACAT AAAAAAACACGAAGGTGAAAGATGAACTGAACGTTCCTCTATCCCCCGAT TTGTACTGATTCCTTCACAGGCAAGGAAAAGGAGCGCTTCACGCTCTGTC TTGCTGTCATGGCAGGCGGCGGCAAGGTTCCACTGCGCATCATCTTCAAG GGCACCCCGTTCATCCCGCCGACCAAGTCGGGGAAGGGCAAGAGCACTCA GCCGCGGAAGGGGTCCATCGCGGCAGAGATTGCCCCCGCGAATCGAACCC GCAACGGGCACCCCGCCGGCGGCATGTCGTTTGGAGTGCAGGATAAGAGC TGGTGCGACGCGCGGGAGTGCACCCTGTGGCTCACGGAGAGCTGGAAGCT GCGCCCCAACAACGGCAGCATCATCAAGCAGCGACCAAGCATCTTGGTCT TGGACGACTTCAAGTGCCACAAAGACGAGGGTTTCATCGCCGACCTCCTG AAGAGAGCCAACACCATCGTCATCCTGATCCCGGGCGGTCTAACTCCTCT GCTCCAGTCGGTGGACCGCATGCTCAACAAGCAGATGAAGCGGCTGCTGC GGGGGATGTACACCGCCCACACCGCCACAGCGGTCGCCGACACCAGGACG GGCAAGCTGAAGCCGCCGGGACGTGGGCAGGTGTCGACGTGGTGCAAGCA GGCGTGGGCACAGATCACTCCGGAGCTGGTCAAGACTTGCTTCAAGATCT GCGGGCTCACGCTTGCTCTCGATGGCAGCGAGGACCACGCC
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Coding sequence (CDS) from alignment at P-littoralis_Contig83:161793..163283-

>mRNA_P-littoralis_Contig83.54.3 ID=mRNA_P-littoralis_Contig83.54.3|Name=mRNA_P-littoralis_Contig83.54.3|organism=Pylaiella littoralis U1_48|type=CDS|length=885bp|location=Sequence derived from alignment at P-littoralis_Contig83:161793..163283- (Pylaiella littoralis U1_48)
TCAGAGGAGTTCAGGGCGAAGTTCAACAACTGGTACCAGCGTTTCCGCAA
GCGCCGCGGGTTTACCGGTAGTATCCGCCGGCGTACCAGCGTGGGACAGA
AGCTGCCCACAGGACACGAGGGCATGGCGTGGGCGACGGTGATGAAGCTT
CGGCAGGCTCTCCTGAAGCGTGCTGAGTCGGTGGCCGAGCAAGTTTTCGA
AGAACTCGGCAACATGGACCAGACGCCCGTCCAGCACGAGATGCCGGTCG
AGACGACTCTGGAGAAGCGTGGTGCCAAGGGTGCTCGCATCAGCACCGGA
GGCAAGGAAAAGGAGCGCTTCACGCTCTGTCTTGCTGTCATGGCAGGCGG
CGGCAAGGTTCCACTGCGCATCATCTTCAAGGGCACCCCGTTCATCCCGC
CGACCAAGTCGGGGAAGGGCAAGAGCACTCAGCCGCGGAAGGGCTGGTGC
GACGCGCGGGAGTGCACCCTGTGGCTCACGGAGAGCTGGAAGCTGCGCCC
CAACAACGGCAGCATCATCAAGCAGCGACCAAGCATCTTGGTCTTGGACG
ACTTCAAGTGCCACAAAGACGAGGGTTTCATCGCCGACCTCCTGAAGAGA
GCCAACACCATCGTCATCCTGATCCCGGGCGGTCTAACTCCTCTGCTCCA
GTCGGTGGACCGCATGCTCAACAAGCAGATGAAGCGGCTGCTGCGGGGGA
TGTACACCGCCCACACCGCCACAGCGGTCGCCGACACCAGGACGGGCAAG
CTGAAGCCGCCGGGACGTGGGCAGGTGTCGACGTGGTGCAAGCAGGCGTG
GGCACAGATCACTCCGGAGCTGGTCAAGACTTGCTTCAAGATCTGCGGGC
TCACGCTTGCTCTCGATGGCAGCGAGGACCACGCC
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