mRNA_P-littoralis_Contig83.38.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig83.38.1 vs. uniprot
Match: D8LK29_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LK29_ECTSI) HSP 1 Score: 289 bits (739), Expect = 2.540e-85 Identity = 204/387 (52.71%), Postives = 225/387 (58.14%), Query Frame = 1
Query: 535 VVIPFFGRVDDDTQRSSWSHLNHRLEEYRQDLVKVVQSLDMIINKLERTAT-EAEDSADDKNMPGEGMRRLAAKLRRKLDKTPPRWQVNIDVLSWLLRPVPFVVGLPAPXXXXXXXXXXXXXXXXXXXXXXXNNAPAARDRK--TADGV-VVPSGGVSDDENHAPEVARAKTRQAGEEFSGSDALRESPSV-----------------LGSASVGERRAVPVXXXXXXXXXXXXXXXAE-KEGPRNRAGFHSYDETHQIFTHILRDWTSEGDSVRAAVYDPLLKALDEYFGGRGEATATNDSEGASDGSSGRRGDAQGDSFRCSDTREQGWWRDQPEPQKASNRRAFCTDRPRTAKVLVPGAGLGRLAAEIAARGYASVHANELSAT 1629
+ IPFF +DD S WSHLNH++EEY+QDLVK VQSLDMII LE A +A A D MPGEGMRRLAAKLRRKL+K PPRWQVN DVLSWLLRPVPFV GLP P + P +DR+ ++ G+ VV G VSD VAR K +QAG G DA E S + ERRA+PV XXXXX K G + R GFHSYDETHQIFTHILRDWTSEGDSVRAAVY PLLKALD+ FG R EA ++ G SDG S GD G S RC Q P A+ A C RTA VLVPGAGLGRLA EIAARGYASVHANELS T
Sbjct: 1 MAIPFFRSGNDDDALSRWSHLNHKVEEYKQDLVKAVQSLDMIITTLESAAAPKANVRAGD--MPGEGMRRLAAKLRRKLNKMPPRWQVNADVLSWLLRPVPFVAGLPVPDPPRPPIPPATSKYDSDQDTTIDTSRPVGKDREDDSSTGIDVVADGDVSDAGGGKEGVARTKQQQAGRVAPGGDATGEDFSAGSXXXXXXXXXXXXXXXXXXXAAEERRAIPVPIFQGVGNGDXXXXXXXXKAGSKTRTGFHSYDETHQIFTHILRDWTSEGDSVRAAVYSPLLKALDDRFG-RQEAASSTSGRGNSDGLSDTDGDRGGGS-RCGA---------QAGPPPATTPPA-CG---RTANVLVPGAGLGRLATEIAARGYASVHANELSTT 370
BLAST of mRNA_P-littoralis_Contig83.38.1 vs. uniprot
Match: A0A6H5JII3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JII3_9PHAE) HSP 1 Score: 278 bits (712), Expect = 3.370e-82 Identity = 180/329 (54.71%), Postives = 200/329 (60.79%), Query Frame = 1
Query: 1243 IFTHILRDWTSEGDSVRAAVYDPLLKALDEYF---------GGRGEATATNDSEGASDGSSGRRGDAQGDSFRCSDTREQGWWRDQPEPQKASNRRAFCTDRPRTAKVLVPGAGLGRLAAEIAARGYASVHANELSATMLSSCYWLMEALRGTDFTGTQTA----PGGSREEDVGVGPSLSPPPGANYML---ERDSDGIGRDGSSGQGCRDXXXXXXXXXXXXXXXXXXXXXXXXXEEAKGFFKFYPFLNDAAHNEMDGEARFRSVLFPDPGARTVLARASGKLSFQAGEFSATYGGVGGPYEGAFDAVVTSFFVDTAPDVVQYVATI 2181
IFTHILRDWTSEG +VRAAVY PLLKALD+ F GGRG++ + D +DG G G RC Q +P A+ A C RTA VLVPGAGLGRLA EIAARGYASVHANELS TMLSSCYWLMEALR DFTGT T P SRE+ S +P + +RD D +G G G + KGF +FYPFLNDA HNEMDGEARFRSVLFPDP R +LA+ASG+LSFQAGEFS TYGGVGGPYEGAFDAVVTSFFVDTAP+VVQ A +
Sbjct: 2 IFTHILRDWTSEGAAVRAAVYSPLLKALDDRFSRQEGASSAGGRGDSYSNGDGLSDTDGDRGGGG-------RCGG---------QADPPPATTPPA-CG---RTANVLVPGAGLGRLATEIAARGYASVHANELSTTMLSSCYWLMEALRRADFTGTPTPTSPLPRASREQHDASLSSSTPXXXXXAVCCVSDRDDDVVG---DFGLGADEDEPATENDAEEGREGGG----------GKGFLEFYPFLNDATHNEMDGEARFRSVLFPDPEGRALLAQASGRLSFQAGEFSETYGGVGGPYEGAFDAVVTSFFVDTAPNVVQVRAAV 297
BLAST of mRNA_P-littoralis_Contig83.38.1 vs. uniprot
Match: A0A835ZIS5_9STRA (N2227-like protein-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZIS5_9STRA) HSP 1 Score: 152 bits (383), Expect = 5.070e-35 Identity = 208/635 (32.76%), Postives = 262/635 (41.26%), Query Frame = 1
Query: 604 RLEEYRQDLVKVVQSLDMIINKLERTATEAEDSADDKNMPGEGMRRLAAKLRRKLDKTPPRWQVNIDVLSWLLRPVPFVVGLPAPXXXXXXXXXXXXXXXXXXXXXXXNNAPAARDRKTADGVVVPSGGVSDDENHAPEVARAKTRQAGEEFSGSDALRESPSVLGSASVGERRAVPVXXXXXXXXXXXXXXXAEKEGPRNRAGFHSYDETHQIFTHILRDWTSEGDSVRAAVYDPLLKALDEYFGGRGEATATNDSEGASDGSSGRRGDAQGDSFRCSDTREQGWWRDQPEPQKASNRRAFCTDRPRTAK---------------------VLVPGAGLGRLAAEIAARGYASVHANELSATMLSSCYWLME-ALRGTDFTGTQTAPGGSREEDVGVGPSLSPPPGANYMLERDSDGIGRDGSSGQGCRDXXXXXXXXXXXXXXXXXXXXXXXXXEEAKGFFKFYPFLNDAAHNEMDGEARFRSVLFPDPGARTVLARASGKLSFQAGEFSATYG----GVGGPYE----GAFDAVVTSFFVDTAPDVVQYVATIRRALRPGGAWINCGPLHWHNPSALALSLDEILLLVAGSGFRLEAVEQLPPSAYRVEDGGGSLRVDEFRPVFWIAILEGG 2418
RLE++R+DLV V++L I+ +E + LAA R KL + PP WQVN+D L LLRPVPF L +P XXXXXXXXXXXXXXXXXXX P A A A E YD+ + + H++RDW+ +G + RAA P+L L EY P PQ A+ +LVPGAGLGRLA E+AARG+ V ANE SA M ++ + ++ ALR GG + D XXXXXXXXXXXXXXXXXXXXXXXXX G YP+L+DA H+ + EARFR+V FPD R RA +LS+ G+F YG G G GAFD VVT FF+DTAPDV++YVA + ALR GG W+N GPLH+H S + S DE+ ++ +GF + QLPP YR + S ++FRP+ W A L G
Sbjct: 33 RLEKFREDLVTAVETLQRQIDYVEGRSPA-----------------LAALWRAKLARIPPCWQVNLDALETLLRPVPF--SLRSPCRSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCPPFAFAAAAAALEP-------------------------------------------------------GYDDAYAVLCHVVRDWSDDGAAARAAALAPILACLREYL---------------------------------------------PLPQCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVPLILVPGAGLGRLAVELAARGW-RVRANERSACMCAAAHAIIGGALRDCR--------GGGADADXXXXXXXXXXXXXXXXXXXXXXXX------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGITVYPYLHDAPHDCVRSEARFRAVAFPDAAGRAAARRARRRLSWDCGDFLELYGPRRRGRSGSXXXXXXGAFDGVVTCFFLDTAPDVLEYVAALTHALRRGGVWVNLGPLHFHRESRVVASADELTAVLREAGFEVLRAAQLPPCEYRRGEPD-STATEQFRPLLWAARLTRG 526
BLAST of mRNA_P-littoralis_Contig83.38.1 vs. uniprot
Match: A0A1Z5JBY6_FISSO (Uncharacterized protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JBY6_FISSO) HSP 1 Score: 108 bits (270), Expect = 2.630e-21 Identity = 101/406 (24.88%), Postives = 151/406 (37.19%), Query Frame = 1
Query: 1204 NRAGFHSYDETHQIFTHILRDWTSEGDSVRAAVYDPLLKALDEYFGGRGEATATNDSEGASDGSSGRRGDAQGDSFRCSDTREQGWWRDQPEPQKASNRRAFCTDRPRTAKVLVPGAGLGRLAAEIAARGYASVHANELSATMLSSCYWLMEALRGTDFTGTQTAPGGSREEDVGVGPSLSPPPGANYMLERDSDGIGRDGSSGQGCRDXXXXXXXXXXXXXXXXXXXXXXXXXEEAKGFFKFYPFLNDAAHNEMDGEARFRSVLFPDPGARTVLARASGKLSFQAGEFSATYGGVGGPYEGAFDAVVTSFFVDTAPDVVQYVATIRRALRP-GGAWINCGPLHWHNPSALALSLDEILLLVAGSGFRL-EAVEQLPPSAYRVEDG-GGSLRVDEFRPVFWIAILE 2412
+RA HSYD+ HQ+ HI+RDWT+EG +R +YD L +D+ ++LVPGAG+GRLA E+A +A V A E S M ++ A +L+R G+ +PF +D NE++ R+ V +PD + G LS+ +F + V G + DAVVT FF+DTA +V++Y+A I + L+P GG W+N GPL WH S + LS DE+ L+ GF++ E + P YR D S D + P+ ++A+L+
Sbjct: 164 SRAVDHSYDDPHQVVAHIVRDWTAEGKQIRRQLYDWCLSKIDKPG----------------------------------------------------------------LRILVPGAGMGRLAWELARNKHAWVEALESSVGMAAA---------------------------------------AASILQRKQSGM---------------------------------------------IHPFSSDQFSNEVNSSHRYLRVQYPDVDDVEIF---EGHLSYTVADFL-SLNSVLGNNQSQLDAVVTCFFLDTATNVLEYIAMITKLLKPKGGMWVNVGPLQWHQKSLIRLSADELYSLIEEVGFKIMEWGVDVAPIEYRSSDKLVRSTHYDAYCPLRFVAVLD 417
BLAST of mRNA_P-littoralis_Contig83.38.1 vs. uniprot
Match: A0A7S1YZ25_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1YZ25_9STRA) HSP 1 Score: 107 bits (268), Expect = 1.510e-20 Identity = 65/173 (37.57%), Postives = 91/173 (52.60%), Query Frame = 1
Query: 1933 YPFLNDAAHNEMDGEARFRSVLFPDPGARTVLARASGKLSFQAGEFSATYGGVGGPYEGAFDAVVTSFFVDTAPDVVQYVATIRRALRP---GGAWINCGPLHWHNPSALALSLDEILLLVAGSGFRLEAVEQLPPSA-YRVEDGGGSL---------RVDEFRPVFWIAILE 2412
YPF+ D NE+D RF SV+FPD A R LS+ G+F ATY G FDA+ TSFFVDTA +V +YVA ++ LR G WIN GP+ WH + L ++DE ++ SGF L E + YR D G++ R + +RP+ ++A+ +
Sbjct: 340 YPFVLDPKTNEVDSRLRFDSVVFPDDLAIEAARRTLPNLSYTVGDFIATYSSPA--KRGKFDAIATSFFVDTAANVYEYVAIMKHLLRSSPEGSVWINVGPIQWHPCALLRPTVDEFRDILTASGFELLKWEVSTEAVGYRHPDDAGTMDPSSPPRKTRCESYRPLRFVAVKK 510
BLAST of mRNA_P-littoralis_Contig83.38.1 vs. uniprot
Match: A0A7S0WRG4_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Chlamydomonas leiostraca TaxID=1034604 RepID=A0A7S0WRG4_9CHLO) HSP 1 Score: 96.7 bits (239), Expect = 1.800e-18 Identity = 62/171 (36.26%), Postives = 90/171 (52.63%), Query Frame = 1
Query: 1924 FKFYPFLNDAAHNEMDGEARFRSVLFPDPGARTVLARASGKLSFQAGEFSATYGGVGGPYEGAFDAVVTSFFVDTAPDVVQYVATIRRALRPGGAWINCGPL--HWHNPS-----ALALSLDEILLLVAGSGFRLEAVEQLPPSAYRVEDGGGSLRVDEFRPVFWIAILEG 2415
+ +P++ A N++ E + R V PD +++ + G LS AG+F YG G +DAVVT FF+DTA +VVQY+ I AL+PGG W+N GPL HW S ++ LSL EI + GFRL+ EQ+ + Y S+ ++ FW + EG
Sbjct: 55 YTIHPWVT-ATCNQLSDEEQLRGVTIPDVHPASIVTQG-GLLSMAAGDFVEVYGSA--EQAGQWDAVVTCFFIDTAHNVVQYLEVIHNALKPGGVWVNLGPLLYHWAESSGVDELSVELSLGEIRRVAQAMGFRLDQ-EQVVDAGYIANSR--SMYKTVYQASFWTMVKEG 218
BLAST of mRNA_P-littoralis_Contig83.38.1 vs. uniprot
Match: A0A3M7E529_HORWE (Uncharacterized protein n=5 Tax=Hortaea werneckii TaxID=91943 RepID=A0A3M7E529_HORWE) HSP 1 Score: 99.0 bits (245), Expect = 4.030e-18 Identity = 68/203 (33.50%), Postives = 97/203 (47.78%), Query Frame = 1
Query: 1909 EAKGFFKFYPFLNDAAH--NEMDGEARFRSVLFPDPGARTVLARA----------SGKLSFQAGEFSATYGGVGGPYEGAFDAVVTSFFVDTAPDVVQYVATIRRALRPGGAWINCGPLHWH--------------------------NPSALALSLDEILLLVAGSGFRLEAVEQLPPSAYRVEDGGGSLRVDEFRPVFWIA 2403
EA G K YP+ A H N + A+ +SV PD L +A S ++S AG+F Y G Y+ F+AVVT FF+DTAP+V+ Y+ TI+ L+ GG WIN GPL WH +P + LS DE+L L+ SGF++ +++P A S+ + +RP FW+A
Sbjct: 218 EAAGQHKIYPW---ALHFSNHLKRSAQLQSVAIPDVHPGLELEKAMHEAQSEIHYSERMSMTAGDFCEIYRRKG--YKDCFNAVVTCFFIDTAPNVLTYIDTIKNCLQQGGIWINLGPLLWHFESAPTPAEKNRERGEQQKDLTSGIGDPGSFELSNDEVLALLQCSGFQICEQKEMPAGATGYIQDPQSMLQNVYRPSFWVA 415
BLAST of mRNA_P-littoralis_Contig83.38.1 vs. uniprot
Match: A0A317WUT5_9EURO (N2227-domain-containing protein n=1 Tax=Aspergillus heteromorphus CBS 117.55 TaxID=1448321 RepID=A0A317WUT5_9EURO) HSP 1 Score: 98.6 bits (244), Expect = 5.220e-18 Identity = 105/423 (24.82%), Postives = 149/423 (35.22%), Query Frame = 1
Query: 1231 ETHQIFTHILRDWTSEGDSVRAAVYDPLLKALDEYFGGRGEATATNDSEGASDGSSGRRGDAQGDSFRCSDTREQGWWRDQPEPQKASNRRAFCTDRPRTAKVLVPGAGLGRLAAEIAARGYASVHANELSATMLSSCYWLMEALRGTDFTGTQTAPGGSREEDVGVGPSLSPPPGANYMLERDSDGIGRDGSSGQGCRDXXXXXXXXXXXXXXXXXXXXXXXXXEEAKGFFKFYPFLNDAAH--NEMDGEARFRSVLFPD--PGARTVLARAS----GKLSFQAGEFSATYGGVGGPYEGAFDAVVTSFFVDTAPDVVQYVATIRRALRPGGAWINCGPLHWH---------------------NPSALALSLDEILLLVAGSGFRLE---AVEQLPPSAYRVEDGGGSLRVDEFRPVFWIA 2403
+ H RDW++EG S R A Y P+L+ L FGGR T ++ KVLVPGAGLGRL E+ A G+A+ NE+S L + W++ G +R+ + +PF A H N + + + ++V PD PG V A+ S GK+S A +F+ Y E FDAV T FF+DTAP++++Y+ IR L+PGG WIN GPL WH P + L+ E+ LV GF +E A + P Y ++D S+ V +RP W+A
Sbjct: 129 KAHSTLRQFYRDWSAEGQSEREACYAPVLQDLRNEFGGRAGGTEEDE-----------------------------------------------------VKVLVPGAGLGRLVFEVCAAGFAA-EGNEISYHQLLASSWVLNHTTG------------ARQHTL---------------------------------------------------------------------HPF---ALHFSNLLSRDQQLQTVQIPDTHPGTTMVEAQGSATPFGKMSMSAADFTVLYSNPSN--EAVFDAVATVFFIDTAPNLIRYIEAIRHCLKPGGIWINVGPLLWHFEDGSNRSHGGSDETQDQGIGEPGNVELTETEVFCLVERMGFAIEKRQAGHERPWCGY-IQDPN-SMLVPLYRPSHWVA 409
BLAST of mRNA_P-littoralis_Contig83.38.1 vs. uniprot
Match: A0A0F4Z0Y9_TALEM (Uncharacterized protein n=1 Tax=Rasamsonia emersonii CBS 393.64 TaxID=1408163 RepID=A0A0F4Z0Y9_TALEM) HSP 1 Score: 98.6 bits (244), Expect = 6.300e-18 Identity = 107/438 (24.43%), Postives = 150/438 (34.25%), Query Frame = 1
Query: 1231 ETHQIFTHILRDWTSEGDSVRAAVYDPLLKALDEYFGGRGEATATNDSEGASDGSSGRRGDAQGDSFRCSDTREQGWWRDQPEPQKASNRRAFCTDRPRTAKVLVPGAGLGRLAAEIAARGYASVHANELSATMLSSCYWLMEALRGTDFTGTQTAPGGSREEDVGVGPSLSPPPGANYMLERDSDGIGRDGSSGQGCRDXXXXXXXXXXXXXXXXXXXXXXXXXEEAKGFFKFYPFLNDAAH--NEMDGEARFRSVLFPD--PGARTVLARAS-----GKLSFQAGEFSATYGGVGGPYEGAFDAVVTSFFVDTAPDVVQYVATIRRALRPGGAWINCGPLHWH-------------------------------NPSALALSLDEILLLVAGSGFRLE---AVEQLPPSAYRVEDGGGSLRVDEFRPVFWIAILEG 2415
+ H RDW++EG R YDP++K L E F +QP P+ +VLVPGAGLGRL +I GYA+ NE+S L + W++ RG + L YPF A H N + E + + V+ PD PG+ + A+A G +S A +F Y G + AFDAV T FF+DTAP+ ++YV IR L+PGG WIN GPL WH P ++ L+ +E+ LV GFR+E A + P Y ++D L+ + +RP W+A G
Sbjct: 140 KAHSTIRQFYRDWSAEGKREREVCYDPVIKILHENFD------------------------------------------NQPRPKS-------------DVRVLVPGAGLGRLVFDICQAGYAA-EGNEISYHQLLASSWMLNHSRGAQ----------------------------QHAL-----------------------------------------------------YPF---ALHFSNLLSREQQLQKVMIPDVHPGSAMLAAQAQEGSSFGTMSMSAADFVVLYSGES--QQNAFDAVATVFFLDTAPNPIRYVEAIRNCLKPGGIWINVGPLLWHFENDDQRSSNNKNNNQLDAEHPTSRRDEAIGEPGSVELTEEEVFYLVERMGFRIERRQAPAERPYCGY-IQDPDNMLQ-NLYRPSLWVARKNG 433
BLAST of mRNA_P-littoralis_Contig83.38.1 vs. uniprot
Match: M2M7E5_BAUPA (Uncharacterized protein n=1 Tax=Baudoinia panamericana (strain UAMH 10762) TaxID=717646 RepID=M2M7E5_BAUPA) HSP 1 Score: 98.2 bits (243), Expect = 6.400e-18 Identity = 64/213 (30.05%), Postives = 88/213 (41.31%), Query Frame = 1
Query: 1909 EAKGFFKFYPFLNDAAHNEMDGEARFRSVLFPDPGARTVLARASGKL----------SFQAGEFSATYGGVGGPYEGAFDAVVTSFFVDTAPDVVQYVATIRRALRPGGAWINCGPLHWH--------------------------------------NPSALALSLDEILLLVAGSGFRLEAVEQLPPSAYRVEDGGGSLRVDEFRPVFWIA 2403
++ G K YPF N + + R+V PD T+L A G++ S AG+F A Y YE FDAV T FF+DTAP+++ Y+ ++ LRPG WIN GPL WH P + LS DE+ LV GF + ++P A S+ D +RP FW+A
Sbjct: 195 QSAGQHKLYPFALTFT-NHLKRSDQLRAVAVPDIHPATILQEAQGRMPPHMKHIARMSMSAGDFCALYRRP--EYESCFDAVTTCFFIDTAPNLINYIEAVKHCLRPGAVWINLGPLLWHFDAAPHPAHRRKSTASSHPQRDEMGDNETGEGYASGIGQPGSFELSNDEVHALVRHFGFDITDQAEMPAGAAGYNQDSASMLQDIYRPSFWVA 404 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig83.38.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig83.38.1 >prot_P-littoralis_Contig83.38.1 ID=prot_P-littoralis_Contig83.38.1|Name=mRNA_P-littoralis_Contig83.38.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=779bp MSSTVGGAIKERTLSPLNCACRSKIISGISLALLLSGTLLLAALLPAARIback to top mRNA from alignment at P-littoralis_Contig83:119406..124645+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig83.38.1 ID=mRNA_P-littoralis_Contig83.38.1|Name=mRNA_P-littoralis_Contig83.38.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=5240bp|location=Sequence derived from alignment at P-littoralis_Contig83:119406..124645+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig83:119406..124645+ >mRNA_P-littoralis_Contig83.38.1 ID=mRNA_P-littoralis_Contig83.38.1|Name=mRNA_P-littoralis_Contig83.38.1|organism=Pylaiella littoralis U1_48|type=CDS|length=2337bp|location=Sequence derived from alignment at P-littoralis_Contig83:119406..124645+ (Pylaiella littoralis U1_48)back to top |