mRNA_P-littoralis_Contig83.35.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig83.35.1
Unique NamemRNA_P-littoralis_Contig83.35.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
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BLAST of mRNA_P-littoralis_Contig83.35.1 vs. uniprot
Match: A0A6H5JCU9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCU9_9PHAE)

HSP 1 Score: 407 bits (1045), Expect = 2.350e-135
Identity = 217/313 (69.33%), Postives = 242/313 (77.32%), Query Frame = 1 
Query:   64 CCWSCLSPSWMCLTVRKSGSASCSALLLAVVLALVVLCDVVRGFVAPAVPVFPSSSSRIMSS--ASNGGVSTEREAKKQYPALPTSVKGILFDMDGTLTDSDTLHFEAYRETFLKVTPSFNSGEPITRSYYDDWMSGNSNPAIVEKLFPDMSADDQTALWKSKEELYRLISTRMTPLPGLLDFLKNCESKGLAMIIVTNAPRLDAVHTLKILDLFDRFGETMVIGYECARSKPYPDPYLEGLSRLNLSAADCVAFEDSVNGVSSAVSAGLYTFGVGEGSQEKLKGVIGGGICVSDYLDRRLPEALGLRV-DTE 993
            C +S  S +WM     ++    C   L   V AL  LCD+   F +P V +  +           ++G VS E  A  Q+P+LP +VKGILFDMDGTLTDSDTLHFEAYRETFLKVTPSFN GE I+R YYDDWMSGNSNPAIVEKLFP+M A+DQTALWK+KEE+YR IST MTPLPGLL FL  C+S+GLAMI+VTNAPRLDAVHTL IL L DRF ETMVIGYECAR+KP+PDPYLEGLSRL L A  CVAFEDSVNGVSSAVSAGLYTFGVGEGSQE+LKGVIGGGICVSDYLD RL  ALG+   DTE
Sbjct:   14 CAFSATS-TWMHSAAGRAWLNPCRTALFVSVFALAALCDIASAFFSPPVRLLTTXXXXXXXXXXGNSGAVSAESGATNQFPSLPATVKGILFDMDGTLTDSDTLHFEAYRETFLKVTPSFNGGERISREYYDDWMSGNSNPAIVEKLFPEMLAEDQTALWKAKEEVYRKISTTMTPLPGLLKFLDCCQSEGLAMILVTNAPRLDAVHTLNILGLSDRFEETMVIGYECARAKPHPDPYLEGLSRLGLPADACVAFEDSVNGVSSAVSAGLYTFGVGEGSQERLKGVIGGGICVSDYLDSRLYAALGVAPRDTE 325
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BLAST of mRNA_P-littoralis_Contig83.35.1 vs. uniprot
Match: D8LK30_ECTSI (Haloacid dehalogenase-like hydrolase family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LK30_ECTSI)

HSP 1 Score: 363 bits (932), Expect = 6.280e-120
Identity = 182/220 (82.73%), Postives = 197/220 (89.55%), Query Frame = 1 
Query:  337 MDGTLTDSDTLHFEAYRETFLKVTPSFNSGEPITRSYYDDWMSGNSNPAIVEKLFPDMSADDQTALWKSKEELYRLISTRMTPLPGLLDFLKNCESKGLAMIIVTNAPRLDAVHTLKILDLFDRFGETMVIGYECARSKPYPDPYLEGLSRLNLSAADCVAFEDSVNGVSSAVSAGLYTFGVGEGSQEKLKGVIGGGICVSDYLDRRLPEALGLRV-DTE 993
            MDGTLTDSDTLHFEAYRETFLK+TPSFN GE I+R YYDDWMSGNSNPAIVEKLFP+M A+DQTALWK+KEE+YR IST MT LPGLL+FL  C+S+GLAMI+VTNAPRLDAVHTL IL L DRF ETMVIGYEC R+KP+PDPYLEGLSRL+L A  CVAFEDSVNGVSSAVSAGLYTFGVGEGSQE+LKGVIGGGICVSDYLD RL  ALG+   DTE
Sbjct:    1 MDGTLTDSDTLHFEAYRETFLKLTPSFNGGERISREYYDDWMSGNSNPAIVEKLFPEMLAEDQTALWKAKEEVYRKISTTMTLLPGLLEFLDGCQSEGLAMILVTNAPRLDAVHTLNILGLSDRFEETMVIGYECPRAKPHPDPYLEGLSRLDLPADACVAFEDSVNGVSSAVSAGLYTFGVGEGSQERLKGVIGGGICVSDYLDSRLHAALGVAPRDTE 220
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BLAST of mRNA_P-littoralis_Contig83.35.1 vs. uniprot
Match: A0A835ZE39_9STRA (HAD-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZE39_9STRA)

HSP 1 Score: 259 bits (662), Expect = 2.220e-78
Identity = 126/231 (54.55%), Postives = 161/231 (69.70%), Query Frame = 1 
Query:  307 PTSVKGILFDMDGTLTDSDTLHFEAYRETFLKVTPSFNSGEPITRSYYDDWMSGNSNPAIVEKLFPDMSADDQTALWKSKEELYRLISTRMTPLPGLLDFLKNCESKG-----LAMIIVTNAPRLDAVHTLKILDLFDRFGETMVIGYECARSKPYPDPYLEGLSRLNLSAADCVAFEDSVNGVSSAVSAGLYTFGVGEGSQEKLKGVIGGGICVSDYLDRRLPEALGLRV 984
            P  +KG LFDMDGTL DSD LHFEAYR+  L++ P  N G+PI +++Y +WMSGNSN  I  +LFPDM    Q  +W  KE LYR IST M PLPGL   L+ C+ +      +A IIVTNAPRLDA HT+++L + +RFG T+VIG ECAR+KP+P+PYLEGL RL L+A DC+AFEDS+NG  SA +AGL+T GV  G  E      G G+C++D+ D RL   LG ++
Sbjct:   62 PAHIKGCLFDMDGTLVDSDELHFEAYRDIILEMRPDHNGGKPIDKAWYKEWMSGNSNAVITARLFPDMPLAQQEEMWDRKEALYRRISTAMAPLPGLARLLEWCDLEDDDKARIATIIVTNAPRLDARHTMEVLGIHERFGNTVVIGAECARAKPHPEPYLEGLRRLGLAARDCIAFEDSLNGCRSATAAGLFTVGVTTGLDEAALRGAGAGVCIADFTDERLWALLGAQM 292
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BLAST of mRNA_P-littoralis_Contig83.35.1 vs. uniprot
Match: A0A6U0VYW9_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A6U0VYW9_9STRA)

HSP 1 Score: 204 bits (518), Expect = 3.200e-56
Identity = 113/232 (48.71%), Postives = 148/232 (63.79%), Query Frame = 1 
Query:  283 AKKQYPALPTSVKGILFDMDGTLTDSDTLHFEAYRETFLKVTPSFNSGEPITRSYYDDWMSGNSNPAIVEKLFPDMSADDQTALWKSKEELYR-LISTRMTPLPGLLDFLKNCESKGLAMIIVTNAPRLDAVHTLKILDLFDRFGETMVIGYECARSKPYPDPYLEGLSRLNLSAADCVAFEDSVNGVSSAVSAGLYTFGV-GEGSQEKLKGVIGGGICVSDYLDRRLPEAL 972
            A+ + P     ++GILFDMDGTLTDSD++HFEAY+ T  ++ P       ITR +YD  MSG SN  IV K+ PD+S + Q  +W  KEE YR L S  M    GL  FL+ C+S  L  I+VTNAPR DA+HTL +L LF RF + +VIG EC  +KP P+PYLEGL +L LSA+ C+AFEDS +G  SA++A L T  V    S+E++    G  + V  + D RL E+L
Sbjct:  149 AELRVPRTDVPLRGILFDMDGTLTDSDSVHFEAYKATLARLAPELPE---ITREFYDKEMSGQSNEIIVPKVLPDLSPEQQRQVWVQKEEEYRRLTSDSMQRFEGLDAFLQWCDSNSLKTIVVTNAPREDAMHTLTMLGLFGRFAKHVVIGMECKEAKPSPEPYLEGLRKLGLSASQCIAFEDSPSGAKSAIAAQLRTVAVLSSRSEEEMVATHGCVMGVRRFDDARLLESL 377
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BLAST of mRNA_P-littoralis_Contig83.35.1 vs. uniprot
Match: W7TRE2_9STRA (Had family hydrolase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TRE2_9STRA)

HSP 1 Score: 198 bits (504), Expect = 3.140e-55
Identity = 96/195 (49.23%), Postives = 132/195 (67.69%), Query Frame = 1 
Query:  301 ALPTSVKGILFDMDGTLTDSDTLHFEAYRETFLKVTPSFNSGEPITRSYYDDWMSGNSNPAIVEKLFPDMSADDQTALWKSKEELYRLISTRMTPLPGLLDFLKNCESKGLAMIIVTNAPRLDAVHTLKILDLFDRFGET-MVIGYECARSKPYPDPYLEGLSRLNLSAADCVAFEDSVNGVSSAVSAGLYTFGV 882
            ++   +KGI FDMDGTLT+SD LHFE YR+T LK  P +N G P+ R++YD  +SG++N  IV  L P    D    LW +KE LYR  S  ++PLPG++  L  C    +  ++VTNAPR++ +HTL  L L DRF ++ ++IG E AR KP+PD Y EGL RL L+A +C+AFEDS +G++SAV+AG+ T  V
Sbjct:   67 SISPHIKGICFDMDGTLTNSDDLHFETYRDTLLKFAPEYNDGRPLERAFYDQKLSGSANEIIVPMLLPHWPQDRMEELWLAKEALYRERSANISPLPGVIRLLDWCTENKIGYVLVTNAPRVECLHTLHSLKLKDRFHDSKIIIGQEMARPKPFPDAYNEGLRRLGLAAKECIAFEDSFSGLASAVAAGIPTVAV 261
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BLAST of mRNA_P-littoralis_Contig83.35.1 vs. uniprot
Match: A0A1X6NWD3_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NWD3_PORUM)

HSP 1 Score: 176 bits (446), Expect = 5.250e-47
Identity = 96/238 (40.34%), Postives = 138/238 (57.98%), Query Frame = 1 
Query:  277 REAKKQYPALPT---SVKGILFDMDGTLTDSDTLHFEAYRETFLKVTPSFNSGEPITRSYYDDWMSGNSNPAIVEKLFPDMSADDQTALWKSKEELY-RLISTRMTPLPGLLDFLKNCESKGLAMIIVTNAPRLDAVHTLKILDLFDRFGETMVIGYECARSKPYPDPYLEGLSRLNLSAADCVAFEDSVNGVSSAVSAGLYTFGVGEGSQEKLKGVIGGGICVSDYLDRRLPEALGL 978
            R+A    P + T   ++  +LFDMDGTL   D  HFEAY +T L++ P FN G+ ITR +Y+  MSG  NP +++++ PD+S +    +  +KE  Y R  +  +  L G    L    + G+ + +VTNAPR    HTL    L DRF   +++G ECAR+KP+PDPY++G   L++   + +AFEDS +G++SAV+AGL T GVG G         G    + DY D RL   LGL
Sbjct:   32 RDAMAGSPPISTQGGTLSAVLFDMDGTLVAGDDHHFEAYADTLLEMEPQFNGGKRITREFYNTRMSGRQNPVLLKEIMPDVSPERGVVIADTKERAYMRRTAGAIEALAGAAALLDVLAAAGVRLGVVTNAPREIMEHTLGEAALRDRF-PVVIVGDECARAKPFPDPYVDGCRALDVQPREAIAFEDSPSGITSAVAAGLLTIGVGTGHPPATLLAAGAAFVIHDYYDERLATVLGL 268
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BLAST of mRNA_P-littoralis_Contig83.35.1 vs. uniprot
Match: A0A0A7JIY9_9PSED (Haloacid dehalogenase n=2 Tax=Pseudomonas parafulva TaxID=157782 RepID=A0A0A7JIY9_9PSED)

HSP 1 Score: 170 bits (431), Expect = 1.190e-45
Identity = 93/212 (43.87%), Postives = 132/212 (62.26%), Query Frame = 1 
Query:  325 ILFDMDGTLTDSDTLHFEAYRETFLKVTPSFNSGEPITRSYYDDWMSGNSNPAIVEKLFPDMSADDQTALWKSKEELYRLISTRMTPLPGLLDFLKNCESKGLAMIIVTNAPRLDAVHTLKILDLFDRFGETMVIGYECARSKPYPDPYLEGLSRLNLSAADCVAFEDSVNGVSSAVSAGLYTFGVGEGSQEKLKGVIGGGICVSDYLDRRL 960
            +LFD+DGTLTD+DTLH +A+R+         + G  +T++ +++ +SG SN  + ++LFP   A    AL + KE L+R +S R+ PLPGLL  L + E +GL M +VTNAPRL+A H L+ L L +RF E +++  E AR KP P PYL GL RLN  A   +AFEDS+ GV +AV AG++T  +      +     G G+ + DY D RL
Sbjct:    5 LLFDLDGTLTDTDTLHLQAFRKLLHD-----HDGRELTQTQFNEQVSGRSNGLLFKELFPQADAAQCQALAERKEALFRELSPRLEPLPGLLRLLAHAEQQGLGMCVVTNAPRLNAEHMLQALGLIERF-EHVLVADELARPKPDPLPYLTGLQRLNAKAEQALAFEDSLPGVKAAVDAGIFTVALATTQPAERLLQAGAGLVIDDYQDPRL 210
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BLAST of mRNA_P-littoralis_Contig83.35.1 vs. uniprot
Match: R7QAB4_CHOCR (HAD-like hydrolase family protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QAB4_CHOCR)

HSP 1 Score: 165 bits (418), Expect = 1.190e-43
Identity = 87/220 (39.55%), Postives = 123/220 (55.91%), Query Frame = 1 
Query:  316 VKGILFDMDGTLTDSDTLHFEAYRETFLKVTPSFNSGEPITRSYYDDWMSGNSNPAIVEKLFPDMSADDQTALWKSKEELYRLISTR-MTPLPGLLDFLKNCESKGLAMIIVTNAPRLDAVHTLKILDLFDRFGETMVIGYECARSKPYPDPYLEGLSRLNLSAADCVAFEDSVNGVSSAVSAGLYTFGVGEGSQEKLKGVIGGGICVSDYLDRRLPEAL 972
            ++ + FD+DGT  +SD +HF  YR+  L++ P+FNSG PITR+YYD  MSG  NP +V  L P +    +T LW++KE  Y    TR + P+ GL D L    +K L   +VTNAPR     T+  + + + FG  +++  +CA  KP P PYL  L    +     V FEDS +G  SAV+AGL T GV     ++     G  + + DY D  L +AL
Sbjct:    8 LQALFFDLDGTCVNSDHIHFSTYRDILLELAPTFNSGLPITRTYYDTHMSGRQNPELVASLLPSVPLPIRTRLWQAKEARYEDHITRGVPPISGLPDLLSLARTKHLRTYVVTNAPRGSCHKTMAAIGIAEHFGSHVIVAEDCAAPKPDPAPYLTALKLAGVRPDQAVVFEDSPSGTCSAVAAGLLTIGVRSTQTDETLRAAGATLTIGDYRDAVLHKAL 227
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BLAST of mRNA_P-littoralis_Contig83.35.1 vs. uniprot
Match: UPI0019088818 (HAD-IA family hydrolase n=1 Tax=unclassified Pseudomonas TaxID=196821 RepID=UPI0019088818)

HSP 1 Score: 165 bits (417), Expect = 1.200e-43
Identity = 94/212 (44.34%), Postives = 131/212 (61.79%), Query Frame = 1 
Query:  325 ILFDMDGTLTDSDTLHFEAYRETFLKVTPSFNSGEPITRSYYDDWMSGNSNPAIVEKLFPDMSADDQTALWKSKEELYRLISTRMTPLPGLLDFLKNCESKGLAMIIVTNAPRLDAVHTLKILDLFDRFGETMVIGYECARSKPYPDPYLEGLSRLNLSAADCVAFEDSVNGVSSAVSAGLYTFGVGEGSQEKLKGVIGGGICVSDYLDRRL 960
            +LFD+DGTLTD+DTLH +A+R T L      + G  +T++ +D+ +SG SN  + ++LFP  SAD   AL + KE L+R +S R+ P+PGLL  L   E + + M +VTNAPRL+A H LK L + +RF   +V   E AR KP P PYL GL RL+  A   +AFEDS+ GV +AV AG++T  +      +     G G+ + DY D RL
Sbjct:    5 LLFDLDGTLTDTDTLHLQAFR-TLLHD----HDGRELTQAQFDEQISGRSNGLLFKELFPQASADQCQALAERKEALFRELSPRLEPMPGLLRLLAYGEQQRIGMCVVTNAPRLNAEHMLKALGVSERFDHVLVAD-ELARPKPDPLPYLTGLQRLSAQAQRALAFEDSLPGVKAAVDAGIFTVALATTQPAQRLLQAGAGLVIDDYDDPRL 210
[Close]
BLAST of mRNA_P-littoralis_Contig83.35.1 vs. uniprot
Match: A0A830D080_9LAMI (Haloacid dehalogenase-like hydrolase domain-containing protein sgpp n=2 Tax=Phtheirospermum japonicum TaxID=374723 RepID=A0A830D080_9LAMI)

HSP 1 Score: 164 bits (415), Expect = 4.780e-43
Identity = 89/216 (41.20%), Postives = 126/216 (58.33%), Query Frame = 1 
Query:  316 VKGILFDMDGTLTDSDTLHFEAYRETFLKVTPSFNSGEPITRSYYDDWMSGNSNPAIVEKLFPDMSADDQTALWKSKEELYR-LISTRMTPLPGLLDFLKNCESKGLAMIIVTNAPRLDAVHTLKILDLFDRFGETMVIGYECARSKPYPDPYLEGLSRLNLSAADCVAFEDSVNGVSSAVSAGLYTFGVGEGSQEKLKGVIGGGICVSDYLDRRL 960
            ++ ILFD+DGTL +SD +H+ AYRE FL++   FN GEPIT  YY   +SG  N  +   LFPD   +        KE ++R L + ++ P+ GL    K  E  GL    VTNAPR +A   +K+  L   F E ++IG EC R+KP+PDPYL+ L +L +S+     FEDSV+G+ + V+AG+   G+  G+ EK+    G  I + DY D  L
Sbjct:   14 LEAILFDIDGTLVNSDPIHYNAYREMFLEI--GFNGGEPITEEYYSKNLSGMHNEELCHILFPDWELERARKFLDDKEAMFRRLAAEQLKPVAGLDKLSKWVEDNGLKRAAVTNAPRDNAEMMIKMSGL-GNFFELLIIGSECERAKPFPDPYLKALEQLGVSSEHAFVFEDSVSGIKAGVAAGMPVVGLATGNPEKVLSEAGAAIVIKDYTDSNL 226
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig83.35.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JCU9_9PHAE2.350e-13569.33Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LK30_ECTSI6.280e-12082.73Haloacid dehalogenase-like hydrolase family protei... [more]
A0A835ZE39_9STRA2.220e-7854.55HAD-like domain-containing protein n=1 Tax=Tribone... [more]
A0A6U0VYW9_9STRA3.200e-5648.71Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
W7TRE2_9STRA3.140e-5549.23Had family hydrolase n=2 Tax=Monodopsidaceae TaxID... [more]
A0A1X6NWD3_PORUM5.250e-4740.34Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
A0A0A7JIY9_9PSED1.190e-4543.87Haloacid dehalogenase n=2 Tax=Pseudomonas parafulv... [more]
R7QAB4_CHOCR1.190e-4339.55HAD-like hydrolase family protein n=1 Tax=Chondrus... [more]
UPI00190888181.200e-4344.34HAD-IA family hydrolase n=1 Tax=unclassified Pseud... [more]
A0A830D080_9LAMI4.780e-4341.20Haloacid dehalogenase-like hydrolase domain-contai... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig83contigP-littoralis_Contig83:107407..115085 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LK30
PFAMsHAD_2
Model size1818
Max annot lvl2759|Eukaryota
Hectar predicted targeting categorysignal peptide
GOsGO:0003674,GO:0003824,GO:0003850,GO:0004346,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016020,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0019203,GO:0042578,GO:0044237,GO:0044424,GO:0044444,GO:0044464,GO:0050308,GO:0050309,GO:0071944
Exons4
Evalue3.21e-125
EggNOG OGsCOG0637@1|root,KOG2914@2759|Eukaryota
Ec32 ortholog descriptionhaloacid dehalogenase-like hydrolase family protein
Ec32 orthologEc-06_007970.1
Descriptionpseudouridine 5'-phosphatase activity
Cds size903
COG categoryL
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig83.35.1prot_P-littoralis_Contig83.35.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig83 107500..114263 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791688.6015108-UTR-P-littoralis_Contig83:107406..1074991680791688.6015108-UTR-P-littoralis_Contig83:107406..107499Pylaiella littoralis U1_48UTRP-littoralis_Contig83 107407..107499 +
1680791688.6673253-UTR-P-littoralis_Contig83:114263..1150851680791688.6673253-UTR-P-littoralis_Contig83:114263..115085Pylaiella littoralis U1_48UTRP-littoralis_Contig83 114264..115085 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791688.6139846-CDS-P-littoralis_Contig83:107499..1078081680791688.6139846-CDS-P-littoralis_Contig83:107499..107808Pylaiella littoralis U1_48CDSP-littoralis_Contig83 107500..107808 +
1680791688.626225-CDS-P-littoralis_Contig83:113209..1132941680791688.626225-CDS-P-littoralis_Contig83:113209..113294Pylaiella littoralis U1_48CDSP-littoralis_Contig83 113210..113294 +
1680791688.6373184-CDS-P-littoralis_Contig83:113469..1136891680791688.6373184-CDS-P-littoralis_Contig83:113469..113689Pylaiella littoralis U1_48CDSP-littoralis_Contig83 113470..113689 +
1680791688.6494658-CDS-P-littoralis_Contig83:113974..1142631680791688.6494658-CDS-P-littoralis_Contig83:113974..114263Pylaiella littoralis U1_48CDSP-littoralis_Contig83 113975..114263 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig83.35.1

>prot_P-littoralis_Contig83.35.1 ID=prot_P-littoralis_Contig83.35.1|Name=mRNA_P-littoralis_Contig83.35.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=301bp
MCLTVRKSGSASCSALLLAVVLALVVLCDVVRGFVAPAVPVFPSSSSRIM
SSASNGGVSTEREAKKQYPALPTSVKGILFDMDGTLTDSDTLHFEAYRET
FLKVTPSFNSGEPITRSYYDDWMSGNSNPAIVEKLFPDMSADDQTALWKS
KEELYRLISTRMTPLPGLLDFLKNCESKGLAMIIVTNAPRLDAVHTLKIL
DLFDRFGETMVIGYECARSKPYPDPYLEGLSRLNLSAADCVAFEDSVNGV
SSAVSAGLYTFGVGEGSQEKLKGVIGGGICVSDYLDRRLPEALGLRVDTE
*
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mRNA from alignment at P-littoralis_Contig83:107407..115085+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig83.35.1 ID=mRNA_P-littoralis_Contig83.35.1|Name=mRNA_P-littoralis_Contig83.35.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=7679bp|location=Sequence derived from alignment at P-littoralis_Contig83:107407..115085+ (Pylaiella littoralis U1_48)
GACGAGAGCACCGCTTACGTGGGTTCTAAGCGGGTTCTGTACTGTACTGC
TGTTGTGCTGCTGTGCTGCTGGTCCTGCCTTTCTCCAAGTTGGATGTGCC
TTACTGTCAGAAAGTCAGGTAGCGCTTCATGCAGCGCATTGCTTCTTGCT
GTCGTGTTGGCGCTTGTGGTCCTCTGTGACGTTGTCAGGGGTTTCGTTGC
ACCTGCTGTACCGGTTTTTCCATCCAGTTCAAGCAGGATCATGAGCAGCG
CCAGTAACGGTGGAGTGTCCACCGAGCGCGAGGCCAAGAAACAGTACCCT
GCTCTGCCAACAAGCGTGAAAGGTATCCTGTTCGACATGGACGGTACCCT
CACTGATAGTGACACGCTCCACTTCGAGGCGTACCGAGAAACGTTCCTCA
AGGTATGTGCAGCAGTACTTGTATCCGGCATAGCACATACTTCGAAGTAT
TTACGAAATGATAGATAGCCTAAGGTGTGTGTCGTGTCAACAGCGAGGGC
AACAGCCGTACTTCCACCACTGCTGCGGTAGTCGTTACCGCTGCCACGCT
CGGCTGTGATAGATTTCGCATCTGGAAAAATGTAGCAGCCGTGCCATTGC
CATCGCATTTGAACCCACATCTTTTGACATGTACTCTCGAATCGATACGT
TATTAGTTGTGAGGGAGCTCAGCTCGTGGTTGTGTGGATTCAAGAGCAGC
TCAGCAAGACGGGCCGAGATTGAAAAGAATGCACGAAGTACTATCGTATT
TTTCTCCTTTTTGGGGGAGAGCACTTCGGAGTTGCGCAGCACATCACGCA
ATTACGAATCACACCCAACGAAAACGTTTAACGACCAAAGATTATCCGAG
AGAATGCGTAATCAGATTTTTCGTAATTCCGCCATCTACCAAATGCAATC
TCCGTAGATACCATACGTATCTCCAATATTTGATACATCCATCATACCAC
TGGACACTTACAGAAATCGATTTATAGGTAGGAGAAACATTTCCCACAAT
TGTCGCTACATCTACTTTCCGGCGATTTATGCCTCCGATATAAAACTCAC
GCTCCACGAAAAATACAAGTACGAATAATCGCATCTTTAGCACGGAGGTA
TTGAAAGACGCCCGCTCACCAACACAATAAAGGGTCTTCATGCATTGAAC
CTATTCATGTCCCTGCCCGATGCGTACTGAATCCAATGTAGTATGAATCA
TTCAATTAATGTATCGACACCCGATCGTATGATACATCGCTCGTAAAGTG
TATGTTTTGCTGTTTTGTGACCACGGCGGTATATGTTGTCATCCCATATT
CTCTGGCACACTAGTCTGCACCCTGCGGTTCAAACTACAGGCTAGGCCCA
TCGACGGGGTCACACAGGAGGAAGGTCAACACAGGAGGAGTTACCCCCAC
CTTCCTTCCGCGGTACATGCGTGAGATTTTTTTCTCGCGAGCAGGGATCC
GCGGTCCCTACCCTCGTCGGCGAAGCCGAATCTTCTTTTACTAACAGCAA
AGCCGCTTTCAAAGTAGCAAAGGAACACATTCGGTATGTGGTGATACGTC
ATGTGCCTGGTTTCTGAGAGTCAAGAACACCAGAACACTGCAGACTGGGA
CAAGAGACACGTTGATATCCCAGTACACACACGTCATAACATCATAGGGG
AGGGGAGGATAAGCACGAGCTCGCCTCGTAGCTGCGATGCAGCACAAGAA
AAAGAAAGGCGAACAAAGAACTCGCCGGTGCTCTCGTCATACATATGAGA
GCAGCGACAAGCAAGCGGCATGCACTTTCTGGGCCCGCCCCGTTGCTGCT
GCTGCTCCTGTCTGGTCGTCATGACGCATGTGCGCCCTTGACATCGGCAG
CAGCGACAGGATTGTCGTCGGCACCATCGGCGTCTTGCGAACCCTTCTCG
CTAGAGCTTGATGGTGCCTGCCTCGGGCGCGTGTGTCCGGGTGTATTGTA
TATTATGGTATATGGTGTGCGGTGTCTGATGTGTAGCCTGCGATGTCGTG
CTGGCACGAGCGCCCGTGGTGGGGAGAGAGAGAGAGAGAGAGAGAGAGAG
AGGGGAGTTTCTCCGAATAGACCGGACCACCAAAGTTGATGACAAGTTGT
TTGGGGCTCTGGAGTTCCAAACGTTTTTTTGTATTGTTGGTGGTCGTTGA
ACAAAATACATTGATTTTCTGGTTGACTACCCCTCCGATATACAACTCGA
TTTCTGTTTTTTTTTTGTCGTCAGGGCCGATTTATATATATCGCCGATGT
TATATGTGTCTACTGTATTCTACGAGTACATCCAACAACCCCCTTGCTCG
TTGGCATCGTCATGACACGGCAAGTCCATTTTATTTCCACCCTATCCACT
ACTGTACCTGGTACTATTTTGCCTCCCAAGATACAAGAAATAATCAAGGA
CTCGAAATATCAAAGTTTTCCCGACAAACAAAATGCTTCGTATATACTTG
TACTACGAAGTAAATCCATATACTTCCGACACCCCAAAGTGTCTCTTCTT
CGCTAACTCTTTATCTCCCAACCAGAAAAACAAAAAATTCTGTCTCTTGC
ATCTATATAGTAAAACACAATCAACCGCAGTCAAACAAACATATTTTACC
ACCACGTTCTCGCCACAAAATCACAGCGCAGCTCGGAAGACTTGCTGCTA
GTTGCCTTGGTAAAAAAATCCGCATGCTGATGTTCCGATGTTCAATGAGC
GATCGAAACCTCATTTGTGTCTACCAGCTCTCTGATAAAAGTGGTGCCTT
GCGTCTGTGTGCTTCGAGTTTAAATTGGTGATCGGATGTGCGCAATCTGG
ATCGCTTCCTGATTATTCTCGAGAACTGGAATGGACGGCATACCTGCTTC
TGGCAACATTCAACGCCAAACCTGCCTCAAAAAGAAACCCATCTTCAGGG
CATCTGCAATTGCCACATACTTTGCCTCCGTCGTCGAAAACGTTTTCTGC
ATCCTAGAAAAGTATGTCCCGCGACTACACACCACAAGACCTCCTATAAC
CGACCTCCTGTCTGTCACGTTCCTTGCGTAGTCGGCATCCACAAACGCTT
GCATATTCGAACCGCTCACAGTGCTGACATGTCCATGGAAACACCCATCC
AATTCGTCTCACGTACGTACGTTCCAGTGTATCGTCTTGGGAGAAACACA
TTTACCTTGCTACTGCTCTCACTGCGCTGGCGATGTCCGGCCGTGTTTGT
GCGGCCAACTACATCAGAGACCTTACCAACTCACGTGAAGGAAATCCTCA
CACACATCATCCTCATCAAAATTCGTGTGTTTAACACAGACGGGAATCTG
AACATTTTTGCCCCGCTTTACCCCATGCTATGCTGCGAACTCTTCGGCAT
ACGTCCGCTGAGAAATCTTGATCTTCAGCGACCCTCTCTCAGAATCTCCC
CCATCAAAATACGTCGAGCACCACCGTAACTCTCCAAGGTTCTTCTCCGG
GCCCATCCCATTTAGACCCCTCCCAAACTGGTTACGCATCCTCTTTATGC
ATCCTTCTGCAATTCTACCGTCGGCGTGTACCGCGATAATCATGACAACA
CATCCCTCCTTTATCAATCGAAAAACGAATGCATCCGCCAATCATTGCAT
CAAAAATAAAATCAGCAAATCGGCTCGTCAGGTGCGCATGCCACTGCCGT
GATGCTTGCGATAAACAACTTCACGATTATGCCAGACAACCTACCACACC
TTGCGGCAGACGCTGATAACATTTTCATCACGATCAGACTGCGCGAAAGC
CTGCTGAATGTCAAAATGGCACAAGTCAAGGTTTTGCTCACAGGCTAAAG
CCGCCAACAAATAGACATGAGAGGCAGAGGCGGTGGGTGCAAAAAAGATC
TCCAAATCAATGGAAGCCCTCTGCATGTCTCCTCGCGCTACAAGCTTTAA
CTCAGATTTAGTCGGCCAACCGTTCTCACCTGCCTTACAGTCAAAAACTC
ACTTTGCATCATGAAGTTCTCTGCTGTTTGCTGCACTGGCTCAAACGTTC
CTGCGTCCAACAAAACCACGAAAAGACTCTCCAGCTACAAAATCTTATTC
TTCCCTAAGCTCCGAGTGCTCGGACCTCGTTGCCTCCTTGATTGTCTTAC
GCACGCGGAGGTCGCTCGCGTAGCAGTGTGGCAGATCAGGGCTCTTATCG
GGTGGGCACTCGGCGCAAAGCGCAGCGTCCACGTTCTCACGAGTGGCGAA
TAACGTCGCAAGCCCATGTGGCTGCCAGTGGTGCCCCTCACCCCCCCCCG
GCCCCCGTCGCTCCCGCGGATTGTGGGTGGCGGCCGCAGGGCTTGAAGTC
GCGGCCTTGTTGTTGTCGGTAGCTCCCGTTGCTCCTGCCGTTCCTGAACC
GTCCGCCGCCGTTCCAGTCCCCTCTCTATTCATACACGTCCGTCGCCCCG
GCCCAAGCGTGCCTCGCGCCATTCTTCGGCTCCTCCTCCCGCGCGATCTC
CAACCCCCCGTAGGCGGGCTATACCGCTTCCTCCACTGCTTACATACTCA
AATCTAAAGAGGCGAGCGAGCAGGACACTTGTCAGAGCCCAAAGGCAGGG
GAGATCTTGTTAACCACGGGTTGGTTTGCATCCAAGTCTGAAAACATGAC
CGTGAGACGCAAGCTTGTTACGAAGCACAGACAATCTACAATATCTAGAC
TGGCGTCTTTGGTACCGGCATTCTTGTTAGAGTTTGTTTTTTCTGCTGCC
GCCTGTGGCTTGTAGTGCTGGCAGAAGATGTCCCGACCCTTACCGGGGCT
ACCCTCAGCCAGAACCTGTGTCAACACGGTCATGTAAACATGCAAACGAG
CATGTGCCACGCTCTTACCGCCCTCTCTACTGTATCTCACTCGTGTGCAC
CGTCCACAACTCGTCCATGTCAACTCCCTCTTTCTCAACTCTGATCTTTG
TGTGTCACGTAATGTGTCACTTAAAACGACTTCTCGAAGGCCTTGTCGAT
GCAAAACTCGCAAGCATGTTAGACTGCTGACACACCATAAGCGTTGTCTG
TGAATTCCCGCCGGATTTCACACTCCCCGTCCACGGCGCACCGCTGCTTG
ATTGTGTTACGCGGAGCGTATCTCACTGAGGCGTGCTGCCTACATGTTGC
TGAGGTGCGGTGCTGAGCCCCGTGAGGGCCCGCTCGATGGTGCGGGCGAT
GTGGTCGGCTGACGTGGTCGATGGCTAGTGCCTCGCGTATTGTGATGGCG
TGCCTCGTACTCTCCGTCCGTCTCCTTGCCTGATTCTTCCTTTCCCCACC
TCGCTGTTACCTCGCCGTTGGCGACGGTCTTATGCAACGGCAGTTGCGAT
CCTGGCCGCTAACCTCTTGTTTACCTCTTAGTCGATGTGCGCATCCTCCG
CGGTGCGGTCGTGCTCGCGACCTTGATCTCTGTTCACATCCATGCTGTTT
GATCCTCAAATCACTGCGAAGTGTTCTTCCTCCTGCTGATGTAGTCGCGA
TGGCGCCGTACCCCTGCCGTTCGAAGAAAACCATGACATACGAAGTACTA
GTGAGCGCACAGCATGACCCTCTCGAGGTCTCCCTATTGATTTCGTAGCA
AGCCGCTGTCTGTGCGAGGAGTACCAGCGGTGACACAGGTCATGGCCCCG
AATGCCATTGCCAGCTCAATTTTAGGCAATTTTGGGGGCTCCGAAGATAG
TATTGTACCGATGGTACCATGCACAGCGTTTCGTGGACGTGACAAACAGA
AGAAGTGAAAAAGTGACAAACTAGCACATGAGCAAGATGCACACGAAGAC
TACAGCGAGAATTATATGTACTTCAAGATTCAATCGCCGCTGCACCGTCG
CAGGTGACGCCGAGTTTCAACAGTGGGGAACCCATCACACGGAGCTATTA
CGACGACTGGATGAGTGGCAACAGCAATCCCGCCATAGGTGAACGTGCCG
ACCGCTGACAGTCAAGCCCATACTCGCAGTGGTGGGATGTGTAGGGTACG
TCGATCTACACCGCTGTGCTCTCTTCTCTTTACCATGTACAACCCTCACG
AAAGCGGCTACTAGTTTTCACGCACGGCCACCCGCCCACCCACGCCCCCA
TTTGATGGCGCAGTCGAAAAACTCTTCCCGGATATGTCGGCCGACGACCA
AACCGCCCTGTGGAAATCAAAGGAGGAATTGTACCGGCTGATCTCCACCA
GGATGACGCCTCTACCTGGGCTGCTGGACTTCCTTAAAAACTGCGAATCC
AAGGGACTTGCCATGATCATCGTTACTAATGCCCCGAGATTAGACGCCGT
ACACACGCTAAAGATTCTGGACCTCTTCGACAGGTATGACTGGGTATGTA
CAGTTGTGGTGTGCTGTTGCGCTGTTCATCAGCCTTACGAAAGTTTACGT
GGAAAATTTGCCCAGAAGTCAGCTTTCGAGCGCTTGATCTGGAGTTCAAG
GTTGCACCCATGAACGTCTTTCATCGACGCGCAGGGATTTAGAGGCCGCC
AACATCCTCAAAGCGTGTTCTTTTTGCAACAGCCTGATACTGTTAGCACT
CTTGCTCGTCGGCTTTGGTATATAGCTATCTGCTGATGGTTTCAAAACGT
GTGTTGTATCTATGTCAGGTTCGGCGAGACGATGGTCATCGGCTACGAGT
GCGCGCGGTCCAAGCCTTACCCGGACCCTTATCTGGAAGGGCTCTCGAGG
CTCAACCTGTCCGCCGCCGATTGCGTCGCCTTTGAAGACAGCGTTAACGG
CGTCTCCTCGGCGGTGTCTGCCGGGCTCTACACCTTCGGCGTAGGCGAAG
GTTCGCAGGAAAAGTTGAAGGGGGTTATCGGAGGCGGAATTTGCGTGTCA
GATTACTTGGATAGACGGCTTCCCGAAGCACTTGGGCTGCGCGTCGACAC
AGAATGACTGACCCAAAACAAACTTGGGCTTTTCATATTGTTCGGTGCGT
CGTCCAAGTACTTGCTGAAGGGGGTTCGTGTGCCTTCATTTAAAATGTTC
ATGTTATTTTGGTAAAGGTTACTCGGAGAGTCGACTTTCCGAGGCGTTCC
TGGATTAACGTTGGCAACGAGCTATTGGATGCAGACATGTAGGAGTGCGT
CCTTATTGTGTTTGGCGTGTCAAAGTGCACGCTGCCGGGATCCAACTATG
CCTGGATGACATTTTGAATCTGCGGGCATGAAAACAGTTTCTAATGTGCA
ACAGGCTGACGTTTTCGACTCTGTTCGGCGAGCAACCTTGGTGTGCTCCG
TCTTTTTTTACTCTATCTTCGAGCCGTGTTCAGGCATGATTTCGAAGACG
AGCTGATGTGAGAAATAATCACAAGAAGCAATAGAAAACCCGTTGCTTCT
TGTTCGTATGCTTTGCGGAAAGCTGTCCCCACAGTAGTTGTTTGGCGCGA
GTCTCCTTGATTTTTCCGTCGCGAGAGGCGGCAGCGAAGCAAAAGCGTAG
TACGTGGTGCACGCCTTGTTCAAATAGTTGCTCTTCTCTCTGCCGGTATA
TCACCTTCAGTGATGAGTGCCTGTTTTCGTTCCTCTTATGACTGTGTGTA
AATACGAGTATCCACACATCGACCCCCCCCGCTGTCCGTGCGTCCCGGGT
TTCCAAGTGCAAGAGCAAACCAGCTCGTGGCGGCATGAAATTGGCATACC
TCTTCGGGGAACTTAGGTACCTTGAGACTTGTTCCAAGAGCAGGGTTTTC
CAAAACTTTTACCATCGTGGAAAAATTGT
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Coding sequence (CDS) from alignment at P-littoralis_Contig83:107407..115085+

>mRNA_P-littoralis_Contig83.35.1 ID=mRNA_P-littoralis_Contig83.35.1|Name=mRNA_P-littoralis_Contig83.35.1|organism=Pylaiella littoralis U1_48|type=CDS|length=903bp|location=Sequence derived from alignment at P-littoralis_Contig83:107407..115085+ (Pylaiella littoralis U1_48)
ATGTGCCTTACTGTCAGAAAGTCAGGTAGCGCTTCATGCAGCGCATTGCT
TCTTGCTGTCGTGTTGGCGCTTGTGGTCCTCTGTGACGTTGTCAGGGGTT
TCGTTGCACCTGCTGTACCGGTTTTTCCATCCAGTTCAAGCAGGATCATG
AGCAGCGCCAGTAACGGTGGAGTGTCCACCGAGCGCGAGGCCAAGAAACA
GTACCCTGCTCTGCCAACAAGCGTGAAAGGTATCCTGTTCGACATGGACG
GTACCCTCACTGATAGTGACACGCTCCACTTCGAGGCGTACCGAGAAACG
TTCCTCAAGGTGACGCCGAGTTTCAACAGTGGGGAACCCATCACACGGAG
CTATTACGACGACTGGATGAGTGGCAACAGCAATCCCGCCATAGTCGAAA
AACTCTTCCCGGATATGTCGGCCGACGACCAAACCGCCCTGTGGAAATCA
AAGGAGGAATTGTACCGGCTGATCTCCACCAGGATGACGCCTCTACCTGG
GCTGCTGGACTTCCTTAAAAACTGCGAATCCAAGGGACTTGCCATGATCA
TCGTTACTAATGCCCCGAGATTAGACGCCGTACACACGCTAAAGATTCTG
GACCTCTTCGACAGGTTCGGCGAGACGATGGTCATCGGCTACGAGTGCGC
GCGGTCCAAGCCTTACCCGGACCCTTATCTGGAAGGGCTCTCGAGGCTCA
ACCTGTCCGCCGCCGATTGCGTCGCCTTTGAAGACAGCGTTAACGGCGTC
TCCTCGGCGGTGTCTGCCGGGCTCTACACCTTCGGCGTAGGCGAAGGTTC
GCAGGAAAAGTTGAAGGGGGTTATCGGAGGCGGAATTTGCGTGTCAGATT
ACTTGGATAGACGGCTTCCCGAAGCACTTGGGCTGCGCGTCGACACAGAA
TGA
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