mRNA_P-littoralis_Contig83.32.2 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig83.32.2
Unique NamemRNA_P-littoralis_Contig83.32.2
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig83.32.2 vs. uniprot
Match: D8LK31_ECTSI (Geranylgeranyl transferase type-2 subunit alpha n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LK31_ECTSI)

HSP 1 Score: 498 bits (1282), Expect = 1.000e-167
Identity = 268/396 (67.68%), Postives = 295/396 (74.49%), Query Frame = 1
Query:    1 MHGRKKSDLPQTKEEKDAVKAKISNYEKARLNPVVGAIRHKRTNGQMDGEYKHLLGKLLRLHPDYYSMWNFRKEAVLAELGRIGDASIEKDEEKDAERKKEGQEESGLSSSSMEEKEVLLRSVYQEELALSVDCIKRNPKSYPAWHHHKWALEKGLHLLGERSALXXXXXXXXXXXXXXXXXXXXXXXXXXXAERMGLSAQEEFDFTTEKIKQNFSNYSAFHFRSKVLPRMVGEMGHDRWQLLSDELDLTHDAMFTEPADQSVWWYHHFLLTWAEEGAASC-DTERYQDFLRAEAATLRELIDVEGRCKWAELALLLVSRRLAKALEAAQPPPQPPHE--------------------EVFKVRESCRSMASRLSELDPMHGRFYEFVERGGSVFG 1125
            MHGRKKSDLPQTKEEKDAV+AKISNY+K     VVGAIRHKR  GQMD EYK LLGKLLRLHPDYYSMWNFRKEAVLAEL RI DA   +    D ++  E      L S S++E++   + +Y+EELALSVDCIKRNPKSYPAWHHHKWALE+GL LLG RSAL                           AERMGLSA+EEFDFTT+KIKQNFSNYSAFHFRSKVLPRMV E GHDRWQLLSDELDLTHDAMFTEPADQSVWWYHHFLLTWA++G  SC D+ERY++ LRAEAATL ELI+VE RCKWAE+ALLLVS+RLA ALE   P PQPP                      E  +VRESCR MA+RLSELDPMHGRFYEFVE+GG+V G
Sbjct:    1 MHGRKKSDLPQTKEEKDAVRAKISNYKK-----VVGAIRHKRATGQMDAEYKQLLGKLLRLHPDYYSMWNFRKEAVLAELSRIEDAHSRQGGSDDGDKAAEEISSGTLLSPSVQEQQK--KKIYEEELALSVDCIKRNPKSYPAWHHHKWALERGLDLLGGRSALAGDLALCATFLELDGRNFHCWAHRMWVAERMGLSAREEFDFTTDKIKQNFSNYSAFHFRSKVLPRMVEEAGHDRWQLLSDELDLTHDAMFTEPADQSVWWYHHFLLTWADDGTDSCSDSERYENILRAEAATLGELIEVEVRCKWAEVALLLVSQRLANALE---PRPQPPRAQDXXXXXXXXXVTAAGNGSTEAGEVRESCRGMAARLSELDPMHGRFYEFVEKGGTVMG 386          
BLAST of mRNA_P-littoralis_Contig83.32.2 vs. uniprot
Match: A0A835Z1Z5_9STRA (Geranylgeranyl transferase type-2 subunit alpha n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1Z5_9STRA)

HSP 1 Score: 221 bits (563), Expect = 5.090e-62
Identity = 136/373 (36.46%), Postives = 190/373 (50.94%), Query Frame = 1
Query:    1 MHGRKKSDLPQTKEEKDAVKAKISNYEKARLNPVVGAIRHKRT------NGQMDGEYKHLLGKLLRLHPDYYSMWNFRKEAVLAELGRIGDASIEKDEEKDAERKKEGQEESGLSSSSMEEKEVLLRSVYQEELALSVDCIKRNPKSYPAWHHHKWALEKGLHLLGERSALXXXXXXXXXXXXXXXXXXXXXXXXXXXAERMGLSAQEEFDFTTEKIKQNFSNYSAFHFRSKVLPRMVGEMGHDR-WQLLSDELDLTHDAMFTEPADQSVWWYHHFLLTWAEEGAASCDT-ERYQDFLRAEAATLRELIDVEGRCKWAELALLLVSRRLAKALEAAQPPPQPPHEEVFKVRESCRSMASRLSELDPMHGRFYE 1095
            MHGRKK D P+++EE  A++AK+ NY K     VV A    R       + Q       ++ K++R++PDYYSMWN+RKEA L  L                    EGQ + G+     +        V ++ELAL+    KRNPK Y AWHH +W LE+G   +G  +A                             E+ GLSA+E+F FTTEKI +NFSNYSAFH+RSK+LP +    G      L+  EL++ H A FTEP DQS WWYH FL+ WA E     +  ++Y + L+ E   +REL+ VE RCKWA + L  +   LA+  +           E  ++    RS+ + L ++DPMH  +Y+
Sbjct:    1 MHGRKKLDKPRSEEELAAIRAKVLNYSK-----VVAATNQLRRELLAHPSAQTQKTLLDVVDKVVRVNPDYYSMWNYRKEAALPILEAA-----------------EGQAKVGVQERRAQ--------VVEQELALAAAAFKRNPKCYSAWHHRRWVLERGADAIGGEAAYRRELELCRQFLLLDSRNFHCWAYRGWVVEQAGLSAEEDFAFTTEKILENFSNYSAFHYRSKLLPAVAEARGAGGVLTLVEQELEMVHQAFFTEPDDQSAWWYHRFLVGWAAEALHGTEHHDKYPELLQKEVDCIRELLFVEERCKWALVTLHHLLCALARTAQDT---------EGVELMAEARSLVTTLVDVDPMHKSYYD 334          
BLAST of mRNA_P-littoralis_Contig83.32.2 vs. uniprot
Match: A0A7R9U2X8_9STRA (Geranylgeranyl transferase type-2 subunit alpha n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U2X8_9STRA)

HSP 1 Score: 136 bits (343), Expect = 2.030e-31
Identity = 118/341 (34.60%), Postives = 162/341 (47.51%), Query Frame = 1
Query:  124 RTNGQMDGEYKHLLGKLLRLHPDYYSMWNFRKEAVLAELGRIGDASIEKDEEKDAERKKEGQEESGLSSSSMEEKEVLLRSVYQEELALSVDCIKRNPKSYPAWHHHKWALEKGLHLLGERSALXXXXXXXXXXXXXXXXXXXXXXXXXXXAERMGLSAQEEFDFTTEKIKQNFSNYSAFHFRSKVLPRMVGEMGHDRWQLLSDELDLTHDAMFTEPADQSVWWYHHFLLTWAEEGAASCDTERYQDFLRAEAATLRELIDVEGRC-----------------KWAELALLLVSRRLAKALEAAQPPPQPPHEEVFKVRESCRSMASRLSELDPMHGRFYE 1095
            R  G      K L  +LLR++PD YS+WN+R++ + A  G     S +   +                             V QEEL +S + +KR PKSYPAW+H KW L++     G    L   XXXXXXXXXXXXXXXXXXXXX   A   G++ +E +++T +++  NFSNYSAFH RS++L  +  E G D+   L  ELD       T P DQS WWY+ FLL  A    A    E     LR E   L EL++VE  C                 KW   AL++++  L   +E  +        E     +  + +   L E+D  H R+Y+
Sbjct:   52 RDKGTFTSAAKDLTAQLLRVNPDNYSVWNYRRQILFAS-GETAPESWKAPPD-----------------------------VAQEELVMSAEALKRQPKSYPAWYHRKWILDRLES--GRERTLQSEXXXXXXXXXXXXXXXXXXXXXRYVAHLAGVTPEENYEYTEDRLNANFSNYSAFHERSRILASLA-EYGEDKISTLQQELDFVQQITVTAPDDQSAWWYYRFLLA-AVTDDADIPIEEKLRLLRQEVGRLNELVEVELECNEDDPSNVAAAGNGENVKW---ALVMLAHVLTLRIELGE-------SEAASSSQRVKEVYHSLIEIDADHQRYYQ 348          
BLAST of mRNA_P-littoralis_Contig83.32.2 vs. uniprot
Match: A0A7S1TWU3_9STRA (Geranylgeranyl transferase type-2 subunit alpha (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TWU3_9STRA)

HSP 1 Score: 134 bits (338), Expect = 7.280e-31
Identity = 128/330 (38.79%), Postives = 175/330 (53.03%), Query Frame = 1
Query:    1 MHGRKKSDLPQTKEEKDAVKAKISNYEKARLNPVVGAIRHKRTNGQMDGEYKHLLGKLLRLHPDYYSMWNFRKEAVLAELGRIGDASIEKDEEKDAERKKEGQEESGLSSSSMEEKEVLLRSVYQEELALSVDCIKRNPKSYPAWHHHKWALEKGLHLLGER-SALXXXXXXXXXXXXXXXXXXXXXXXXXXXAERMGLSAQEEFDFTTEKIKQNFSNYSAFHFRSKVLPRMVGEMGHDRWQLLSDELDLTHDAMFTEPADQSVWWYHHFLLTWAEEGAASCDTERYQDFLRAEAATLRELIDVEGRCKWAELALLLVSRRLAKALEAAQ 987
            MHG  ++      EE+ A +A  +   KA    +  A++  R  G        L  +LLR++PD YS WN R+E + A                       G+ E G +  + E    L   V   EL L+ + ++R PKSYPAWHH +W LE+   L G+R +A   XXXXXXXXXXXXXXXXXXXXXXXX A   G++ +E   +T +++  NFSNYSAFH RS+VLPR+      D   +L++EL L  +   TEP DQS WWY+ FLL    +  A    +     LR E   LR+L+++E  CKWA + L  +    A  LE A+
Sbjct:   46 MHGVSRAAWKSRTEEELAKRAAKAKQYKA----LEAALQDVRRRGDNSDAAVDLGAQLLRVNPDAYSAWNHRREMLFARTTAAA-----------------GETEGGGAGGAWE----LAADVAAGELRLTAEALRRQPKSYPAWHHRRWVLER---LAGDRETAFAEXXXXXXXXXXXXXXXXXXXXXXXXAAAVAGVTPEENLAYTQDRLDVNFSNYSAFHERSQVLPRLEAYR-EDPLAVLAEELMLVQNITVTEPEDQSAWWYYRFLLAALLQVEAEDGVKLTA--LRGEQQNLRDLLELETDCKWALVMLAHIHTHTA-GLENAE 343          
BLAST of mRNA_P-littoralis_Contig83.32.2 vs. uniprot
Match: UPI000C78249F (geranylgeranyl transferase type-2 subunit alpha-like n=1 Tax=Eurytemora affinis TaxID=88015 RepID=UPI000C78249F)

HSP 1 Score: 137 bits (345), Expect = 8.430e-31
Identity = 95/282 (33.69%), Postives = 145/282 (51.42%), Query Frame = 1
Query:    1 MHGRKK--SDLPQTKEEKDAVKAKISNYEKARLNPVVGAIRHKRTNGQMDGEYKHLLGKLLRLHPDYYSMWNFRKEAVLAELGRIGDASIEKDEEKDAERKKEGQEESGLSSSS---MEEKEVLLRSVYQEELALSVDCIKRNPKSYPAWHHHKWALEKGLHLLGERSALXXXXXXXXXXXXXXXXXXXXXXXXXXXAERMGLSAQEEFDFTTEKIKQNFSNYSAFHFRSKVLPRMVGEMGHDRWQLLSDELDLTHDAMFTEPADQSVWWYHHFLLTWAEEG 831
            MHGR K  +   Q KE+K    AK++ Y KA     +G +  +R  G++D +   + G++L+ +PD  ++WN RKE +L  +      ++   +EKD    ++GQEE          M +++ +L S    EL L+  C+  NPKSY AWHH  W LE  ++    R                              A++ G+  Q+E +FT EKI++NFSNYSA+H+RSK+LP +  +    +   +  ELDL  +A FT+PAD S W+YH +LL    EG
Sbjct:    1 MHGRVKVKTTEQQEKEKKIERDAKLAAYRKA-----MGVLLSRRAEGKLDDQQLVISGQVLQGNPDISTLWNIRKEILLHYI------NLGTQKEKDVGEGEKGQEEVDCGKEENVPMHDQDEMLSS----ELDLTQQCLIANPKSYGAWHHRTWCLEHMINPDWSRELALCRKFLKLDERNFHCWDYRKWV-----ADKAGVKPQQELEFTLEKIEENFSNYSAWHYRSKLLPLLNPDTSSIQEDQVHKELDLVQNAAFTDPADSSAWFYHTWLLGQESEG 262          
BLAST of mRNA_P-littoralis_Contig83.32.2 vs. uniprot
Match: A0A0P1AIP1_PLAHL (Geranylgeranyl transferase type-2 subunit alpha n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AIP1_PLAHL)

HSP 1 Score: 134 bits (336), Expect = 1.680e-30
Identity = 102/370 (27.57%), Postives = 165/370 (44.59%), Query Frame = 1
Query:    1 MHGRKKSDLPQTKEEKDAVKAKISNYEKARL-NPVVGAIRHKRTNGQMDGEYKHLLGKLLRLHPDYYSMWNFRKEAVLAELGRIGDASIEKDEEKDAERKKEGQEESGLSSSSMEEKEVLLRSVYQEELALSVDCIKRNPKSYPAWHHHKWALEKGLHLLGERSALXXXXXXXXXXXXXXXXXXXXXXXXXXXAERMGLSAQEEFDFTTEKIKQNFSNYSAFHFRSKVLPRMVGEMGHDRWQLLSDELDLTHDAMFTEPADQSVWWYHHFLLTWAEEGAASCDTERYQDFLRAEAATLRELIDVEGRCKWAELALLLVSRRLAKALEAAQPPPQPPHEEVFKVRESCRSMASRLSELDPMHGRFYEFVER 1107
            MHGR KS + + KE++   + +     K R+ + V G +   +     +     L   LL L+P+++ +WN+R++ + A   +  D + E  E                              + + EL L++D ++RNPKSY  W   KW ++   H LG+   L                            E   +  +++  FTT+KI+QNFSNYSA H RS  LP+ +        +++ DE++L   A+FTEP DQS W+Y+ +L+T   E   S   E   +FL+ +A  L EL+++E   KWA + L  +  RL   +            E  KV   C  +  R   LDP H  +Y+ ++R
Sbjct:    1 MHGRVKS-IEREKEQQKTDEQRQEELSKVRMYHEVAGKVLDLKRQQFFEPSVLPLTSHLLLLNPEFHMVWNYRRQTIDALATKSADPAAEWQE------------------------------LAKTELKLTLDALQRNPKSYSTWFQRKWIID---HRLGD---LQKEIGLCDKLLNLDERNFHCWNYRRHVCELANVPKEDQLAFTTQKIEQNFSNYSALHHRSINLPKPLTA------EVIFDEIELIQQAVFTEPDDQSAWFYYRWLVTSMVELVKS-SAENAVEFLKKQAQWLEELVEMEAEAKWAIVTLADICGRLGVIINVGG-------WEEAKVH--CLDLYDRAIALDPDHRSYYDDMKR 317          
BLAST of mRNA_P-littoralis_Contig83.32.2 vs. uniprot
Match: D0N0T5_PHYIT (Geranylgeranyl transferase type-2 subunit alpha n=15 Tax=Phytophthora TaxID=4783 RepID=D0N0T5_PHYIT)

HSP 1 Score: 132 bits (332), Expect = 3.380e-30
Identity = 101/370 (27.30%), Postives = 165/370 (44.59%), Query Frame = 1
Query:    1 MHGRKKSDLPQTKEEKDAVKAKISNYEKARL-NPVVGAIRHKRTNGQMDGEYKHLLGKLLRLHPDYYSMWNFRKEAVLAELGRIGDASIEKDEEKDAERKKEGQEESGLSSSSMEEKEVLLRSVYQEELALSVDCIKRNPKSYPAWHHHKWALEKGLHLLGERSALXXXXXXXXXXXXXXXXXXXXXXXXXXXAERMGLSAQEEFDFTTEKIKQNFSNYSAFHFRSKVLPRMVGEMGHDRWQLLSDELDLTHDAMFTEPADQSVWWYHHFLLTWAEEGAASCDTERYQDFLRAEAATLRELIDVEGRCKWAELALLLVSRRLAKALEAAQPPPQPPHEEVFKVRESCRSMASRLSELDPMHGRFYEFVER 1107
            MHGR KS + + KE+      +     K R+ + V G +   +     +     L   LL L+P+++ +W++R++A+        DA  +K E  +AE                      + ++ + EL L++D ++RNPKSY AW   +W +++GL        L                            +  G+S  E+  FTT+KI+QNFSNYSA H RS  LP  +         +L DE+ L   A+FTEP DQS W+Y+ +LLT   E   S   E    FL+++   L EL+++E   KW  + L  +  RL+   + +            + ++    +  R   LDP H  +YE +++
Sbjct:   12 MHGRVKS-VEREKEQHKTDAQRQEELSKVRMYHEVAGKVLDMKRQQLYEPSVLPLTSHLLLLNPEFHVVWSYRRQAI--------DALAQKAENPEAE----------------------MLTMAKTELKLTLDALQRNPKSYSAWFQRQWIIDRGL------GDLKMEIGLCDKLLNLDERNFHCWNYRRHVCKLAGVSKAEQLAFTTQKIEQNFSNYSALHHRSITLPEPLSA------DVLFDEIGLVQQAVFTEPDDQSAWFYYRWLLTSMVELVES-SAEDASGFLKSQVQWLNELLEMESEAKWVVVTLADLQFRLSVITDVSG---------WEEAKKRSVGLYDRAIALDPDHRHYYEDMKK 328          
BLAST of mRNA_P-littoralis_Contig83.32.2 vs. uniprot
Match: A0A225WMF4_9STRA (Geranylgeranyl transferase type-2 subunit alpha n=3 Tax=Phytophthora TaxID=4783 RepID=A0A225WMF4_9STRA)

HSP 1 Score: 132 bits (331), Expect = 3.620e-30
Identity = 102/366 (27.87%), Postives = 167/366 (45.63%), Query Frame = 1
Query:    1 MHGRKKSDLPQTKEEKDAVKAKISNYEKARL-NPVVGAIRHKRTNGQMDGEYKHLLGKLLRLHPDYYSMWNFRKEAVLAELGRIGDASIEKDEEKDAERKKEGQEESGLSSSSMEEKEVLLRSVYQEELALSVDCIKRNPKSYPAWHHHKWALEKGLHLLGERSALXXXXXXXXXXXXXXXXXXXXXXXXXXXAERMGLSAQEEFDFTTEKIKQNFSNYSAFHFRSKVLPRMVGEMGHDRWQLLSDELDLTHDAMFTEPADQSVWWYHHFLLTWAEEGAASCDTERYQDFLRAEAATLRELIDVEGRCKWAELALLLVSRRLAKALEAAQPPPQPPHEEVFKVRESCRSMASRLSELDPMHGRFYE 1095
            MHGR KS + + KE++   + +     K R+ + V G +   +     +     L   LL L+P+++ +WN+R++A+        DA  +K E  +AE                      ++ + + EL L++D ++RNPKSY AW   KW +++GL  L +   L                            +  G+S  ++  FTT+KI+QNFSNYSA H RS  LP  +         ++ +E+ L   A+FTEP DQS W+Y+ +L+T   E   S   E    FL+++   L EL ++E   KW  +AL  +  R+    E              + ++    +  R+ +LDP H R+YE
Sbjct:    1 MHGRVKS-VEREKEQQKTDEQRQEELSKVRMYHEVAGKVLDMKRQQVYEPSVLPLTSHLLLLNPEFHVVWNYRRQAI--------DALAQKAENPEAE----------------------MQEMAKTELKLTLDALQRNPKSYSAWFQRKWIIDRGLGDLKKEIGLCDKLLNLDERNFHCWNYRRHV------GKLAGMSEDDQLGFTTQKIEQNFSNYSALHHRSISLPDPLTA------DVVFEEIGLVQQAVFTEPDDQSAWFYYRWLVTSMLELVES-SAEDTAGFLKSQVQWLDELQEMETEAKWVIVALADLHYRIGTITEVGG---------WEQSKKQSVDLYHRVIDLDPDHRRYYE 313          
BLAST of mRNA_P-littoralis_Contig83.32.2 vs. uniprot
Match: W7TG25_9STRA (Geranylgeranyl transferase type-2 subunit alpha n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7TG25_9STRA)

HSP 1 Score: 133 bits (335), Expect = 5.700e-30
Identity = 119/427 (27.87%), Postives = 187/427 (43.79%), Query Frame = 1
Query:    1 MHGRKKSD-----LPQTKEEKDAVKAKISNYEKARLNPVVGA--IRHKR----TNGQMDGEYKHLLGKLLRLHPDYYSMWNFRKEAVLAELGRIGDASIEKDEEKDAERKKEGQEESGLSSSSMEEKEVLLRSVYQEELALSVDCIKRNPKSYPAWHHHKWALEKGLHLLGERSALXXXXXXXXXXXXXXXXXXXXXXXXXXXAERMGL---------------------SAQEEFDFTTEKIKQNFSNYSAFHFRSKVLPRMVGEM--GHDRWQLLSDELDLTHDAMFTEPADQSVWWYHHFLLTWAEEGAASCDTERYQDF-------------------LRAEAATLRELIDVEGRC-----KWAELALLLVSRRLAKALEAAQPPPQPPHEEVFKVRESCRSMASRLSELDPMH-GRFYEFVE 1104
            MHGR+K +     L +++ EK+A K K+  Y++     +     +RH +    T   +D +   L  +LLR++PD Y++WN RKE ++A      +A   + E+++ E ++EG            +  +   S  Q EL L +DCI++NPKSY AWHH +W L+    L    +                             A+ + L                     + ++EF+F+T +I +NFSNYSAFH R+      + E     D    L  ELD+   A+FTEP DQ+ WWYH  L++ A     + DTER ++                    L  E   LREL++ EG       +WA L L  +  +LA+  E           E   +R   + +  RL  LDP H GR+ + ++
Sbjct:    1 MHGRRKDEYQRTHLARSQAEKEAAKNKVFKYKQLMELALQQRQEMRHCKEALVTGEALDNDLV-LSSQLLRINPDVYTLWNHRKEMIVASGVLRQEAEGGETEKEECESEREGG-----------KAPLPPGSFLQTELDLVIDCIRKNPKSYGAWHHRRWLLDHAFSLSPSAAPPNPSSPVAPLPALSRQLKPVLDQELFLCAKLLDLDERNFHCWSYRRWVVSKHPARTPRDEFEFSTSRILKNFSNYSAFHHRASYFWDYLREAHPNLDPPSFLERELDMVQQAVFTEPDDQTAWWYHQHLISLA----LAWDTEREKELGERGDQELTPRGVSFAQRVLEKEVKVLRELVE-EGEAEGGGYRWAVLTLADLLGKLARRKEGKS--------EEASLRAESQKLLKRLPALDPDHAGRYQDMLD 402          
BLAST of mRNA_P-littoralis_Contig83.32.2 vs. uniprot
Match: F0W4K2_9STRA (Geranylgeranyl transferase type-2 subunit alpha n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0W4K2_9STRA)

HSP 1 Score: 129 bits (323), Expect = 5.040e-29
Identity = 101/372 (27.15%), Postives = 178/372 (47.85%), Query Frame = 1
Query:    1 MHGRKKSDLPQTKEEKDAVKAKISNYEKARL-NPVVGAIRHKRTNGQMDGEYKHLLGK-LLRLHPDYYSMWNFRKEAVLAELGRIGDASIEKDEEKDAERKKEGQEESGLSSSSMEEKEVLLRSVYQEELALSVDCIKRNPKSYPAWHHHKWALEKGLHLLGERSALXXXXXXXXXXXXXXXXXXXXXXXXXXXAERMGLSAQEEFDFTTEKIKQNFSNYSAFHFRSKVLPRMVGEMGHDRWQLLSDELDLTHDAMFTEPADQSVWWYHHFLLTWA---EEGAASCDTERYQDFLRAEAATLRELIDVEGRCKWAELALLLVSRRLAKALEAAQPPPQPPHEEVFKVRESCRSMASRLSE-LDPMHGRFYEF 1098
            MHGR KS + +  +EK     ++ +  K R+   +V  +   +     D +    L + LL L+ +++ +W +R+E +++ +       +EK+E  D               S++E        + +EEL L+ + ++RNPKSY AW H +W L+K L    ++  L                           A+++G+ A+EE  F+T KI+QNFSNYSA H RS  LP  + +       ++ +E++L   A+FTEP DQSVW+Y+ +L+  A   E      ++ +   F+ ++   +REL  +E   KW  + L  +  RL               +++ + RE CR++  +LS+ +D  H  +YE+
Sbjct:    1 MHGRVKS-VERAIDEKKTEDDRVEDLNKVRMYKDIVSKVLRLKKESVYDAQVALPLTRHLLLLNQEFHIVWGYRRE-IISHI-------LEKEESTDT--------------SNLE--------LGKEELKLTFEALQRNPKSYAAWFHRQWVLDKNLVENVQKEILLCEKLLDLDERNFHCWNYRRYV-----AKKLGMGAEEELQFSTIKIEQNFSNYSALHHRSISLPVPLTK------DIILEEINLVQQAVFTEPDDQSVWFYYRWLIQNAVDLENNETVSESCQLHSFIHSQITWVRELYVMEASAKWVIVTLADLYGRLCIYTTNG--------DDIQETREKCRALYRKLSDHIDQDHKHYYEY 322          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig83.32.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LK31_ECTSI1.000e-16767.68Geranylgeranyl transferase type-2 subunit alpha n=... [more]
A0A835Z1Z5_9STRA5.090e-6236.46Geranylgeranyl transferase type-2 subunit alpha n=... [more]
A0A7R9U2X8_9STRA2.030e-3134.60Geranylgeranyl transferase type-2 subunit alpha n=... [more]
A0A7S1TWU3_9STRA7.280e-3138.79Geranylgeranyl transferase type-2 subunit alpha (F... [more]
UPI000C78249F8.430e-3133.69geranylgeranyl transferase type-2 subunit alpha-li... [more]
A0A0P1AIP1_PLAHL1.680e-3027.57Geranylgeranyl transferase type-2 subunit alpha n=... [more]
D0N0T5_PHYIT3.380e-3027.30Geranylgeranyl transferase type-2 subunit alpha n=... [more]
A0A225WMF4_9STRA3.620e-3027.87Geranylgeranyl transferase type-2 subunit alpha n=... [more]
W7TG25_9STRA5.700e-3027.87Geranylgeranyl transferase type-2 subunit alpha n=... [more]
F0W4K2_9STRA5.040e-2927.15Geranylgeranyl transferase type-2 subunit alpha n=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig83contigP-littoralis_Contig83:102402..107201 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LK31
Preferred nameRABGGTA
PFAMsLRR_9,PPTA,RabGGT_insert
Model size2307
Max annot lvl2759|Eukaryota
KEGG koko:K14050,ko:K20306
Hectar predicted targeting categoryother localisation
GOsGO:0003008,GO:0003674,GO:0003824,GO:0004659,GO:0004661,GO:0004663,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005777,GO:0005829,GO:0005886,GO:0005968,GO:0006464,GO:0006605,GO:0006612,GO:0006807,GO:0006810,GO:0006886,GO:0006888,GO:0007600,GO:0007601,GO:0008104,GO:0008150,GO:0008152,GO:0008318,GO:0009987,GO:0010035,GO:0010038,GO:0010941,GO:0015031,GO:0015833,GO:0016020,GO:0016043,GO:0016192,GO:0016740,GO:0016765,GO:0017016,GO:0017137,GO:0018342,GO:0018344,GO:0019538,GO:0019899,GO:0022607,GO:0031267,GO:0031974,GO:0031981,GO:0032501,GO:0032991,GO:0033036,GO:0034613,GO:0036211,GO:0042221,GO:0042579,GO:0042886,GO:0042981,GO:0043067,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043412,GO:0043687,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0045184,GO:0046686,GO:0046907,GO:0046982,GO:0046983,GO:0048193,GO:0050789,GO:0050794,GO:0050877,GO:0050896,GO:0050953,GO:0051020,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0065003,GO:0065007,GO:0070013,GO:0070727,GO:0071702,GO:0071704,GO:0071705,GO:0071840,GO:0071944,GO:0072657,GO:0072659,GO:0090150,GO:0097354,GO:0140096,GO:1901564,GO:1902494,GO:1990234,GO:1990778
Exons7
Evalue3.71e-174
EggNOG OGsCOG5536@1|root,KOG0529@2759|Eukaryota
Ec32 ortholog descriptionProtein prenyltransferase, alpha subunit
Ec32 orthologEc-06_007980.1
EC2.5.1.60
Descriptionprotein geranylgeranylation
Cds size1179
COG categoryO
BRITEko00000,ko01000,ko01006,ko04131
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig83.32.2prot_P-littoralis_Contig83.32.2Pylaiella littoralis U1_48polypeptideP-littoralis_Contig83 103530..107201 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791688.480683-UTR-P-littoralis_Contig83:102401..1035291680791688.480683-UTR-P-littoralis_Contig83:102401..103529Pylaiella littoralis U1_48UTRP-littoralis_Contig83 102402..103529 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791688.4931188-CDS-P-littoralis_Contig83:103529..1037841680791688.4931188-CDS-P-littoralis_Contig83:103529..103784Pylaiella littoralis U1_48CDSP-littoralis_Contig83 103530..103784 -
1680791688.5076108-CDS-P-littoralis_Contig83:104101..1042691680791688.5076108-CDS-P-littoralis_Contig83:104101..104269Pylaiella littoralis U1_48CDSP-littoralis_Contig83 104102..104269 -
1680791688.5200787-CDS-P-littoralis_Contig83:104508..1046251680791688.5200787-CDS-P-littoralis_Contig83:104508..104625Pylaiella littoralis U1_48CDSP-littoralis_Contig83 104509..104625 -
1680791688.5323493-CDS-P-littoralis_Contig83:104922..1050761680791688.5323493-CDS-P-littoralis_Contig83:104922..105076Pylaiella littoralis U1_48CDSP-littoralis_Contig83 104923..105076 -
1680791688.544005-CDS-P-littoralis_Contig83:105432..1056801680791688.544005-CDS-P-littoralis_Contig83:105432..105680Pylaiella littoralis U1_48CDSP-littoralis_Contig83 105433..105680 -
1680791688.553626-CDS-P-littoralis_Contig83:106005..1061431680791688.553626-CDS-P-littoralis_Contig83:106005..106143Pylaiella littoralis U1_48CDSP-littoralis_Contig83 106006..106143 -
1680791688.564801-CDS-P-littoralis_Contig83:107102..1072011680791688.564801-CDS-P-littoralis_Contig83:107102..107201Pylaiella littoralis U1_48CDSP-littoralis_Contig83 107103..107201 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig83.32.2

>prot_P-littoralis_Contig83.32.2 ID=prot_P-littoralis_Contig83.32.2|Name=mRNA_P-littoralis_Contig83.32.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=393bp
MHGRKKSDLPQTKEEKDAVKAKISNYEKARLNPVVGAIRHKRTNGQMDGE
YKHLLGKLLRLHPDYYSMWNFRKEAVLAELGRIGDASIEKDEEKDAERKK
EGQEESGLSSSSMEEKEVLLRSVYQEELALSVDCIKRNPKSYPAWHHHKW
ALEKGLHLLGERSALSEDLALCATFLDLDGRNFHCWAHRMWVAERMGLSA
QEEFDFTTEKIKQNFSNYSAFHFRSKVLPRMVGEMGHDRWQLLSDELDLT
HDAMFTEPADQSVWWYHHFLLTWAEEGAASCDTERYQDFLRAEAATLREL
IDVEGRCKWAELALLLVSRRLAKALEAAQPPPQPPHEEVFKVRESCRSMA
SRLSELDPMHGRFYEFVERGGSVFGMKTGMKTGRAALNETDA*
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mRNA from alignment at P-littoralis_Contig83:102402..107201-

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig83.32.2 ID=mRNA_P-littoralis_Contig83.32.2|Name=mRNA_P-littoralis_Contig83.32.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=4800bp|location=Sequence derived from alignment at P-littoralis_Contig83:102402..107201- (Pylaiella littoralis U1_48)
ATGCACGGCAGGAAGAAGAGCGACCTTCCGCAGACCAAGGAGGAGAAGGA TGCAGTAAAAGCAAAAATCTCCAACTATGAAAAGGCGAGGCTCAACCCTG TAAATTGAATCGAATTTTTCTAATTTCAAACCAGACTGCGGAGGATGAAA GAGGAGTTCTTCGCCCGGCTTGATGCGTGATCAAAGGGCTGACCATGGGT TTCCTCGAGGCCTACTCGTACTATTGACCCTGTAAATTGAATCGAATTTT TCTAATTTCAAACCAGACTGCGGAGGATGAAAGAGGAGTTCTTCGCCCGG CTTGATGCGTGATCAAAGGGCTGACCATGGGTTTCCTCGAGGCCTACTCG TACTATTGCTGCGCGACACATGATCCGTTGTTAGTTTGACCACGCATGCC CTTGGGCGTACCATATTGCGCAGCAGTTATGTACAGTTTTGATCGCCGAC TATGTGCAGCGGTCAAAGAACGCAGAGTCTTTCTCTCTCTCTCTCTCTCT CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCGATGGAAATATCGAGCG AACGAACATCAAACTAGACCCTCTCTGCTGGTCTGCTACTCACGAGAGCG CTGCGAAGTTTTGCTTGCTGACTTGGACAGCACGCCCAATGGTAGACTTG AAAATAATTCTGCCGGTCTGGACGACACAGCAGTCCCATCTCAGGGTGAG TGCTTTTCTCTTTGATGTGGAACGAATTAAAAAAAAAACGGTGAGAGGCA GATGGCTTTGTGTTGGCGAATTGTAATGTGTTTGTTTGTGTGTCCATCCA TTTTGTTCTGGGCGCCAGTCTACATACAGTACACGTTTCCGTATGAATGA AGTGGGTGCACCAGCCGGGGTCACAGAGAAGGAAGGTCACATAGAAAGGA TTTTTTTTTCCCTCCACCGACCTTCTGCGGTGCTCATCTTTTAGTACCAG CTGTAAAATACGGCGGCATTGAGATGATGGCTCGTGTTCACCAGTCATGA TGTCCGAGGGTGCGATGCGTGATCCCCTTGTCACCCATTCTGGTTTTGTT CGGTGCAGGTGGTTGGTGCCATCCGCCACAAGCGCACCAATGGGCAGATG GATGGCGAGTACAAGCATCTCTTAGGGAAACTCTTGCGCCTACACCCGGA CTACTACTCCATGTGGAACTTCCGTAAGGAGGCTGTGCTAGCGGAGGTGA GAGAGAGGGAGAGGAGGGGTCGACGTAGGGCGGGGTGGATAAGGGCAGGA ATAGAGAAGGACAGAGGTATAAGCAAAGAGAACCGACGGAAAGCCTACTA GCCTTGCCTCGCCGTCCCATATTAATACCCCCCCCTCCCCGCTCTCCCCT CTCTATGATTCTGGACACGATACGTAGCTGAATTGGTACCGACCGCAGCG TCTCGTTCTTTTTCTAACCCAATGACGACTGCTGTGTCTTTCTGTTTTGC TCTACCCATCATCGACAACGGACAACCTGTCTACCAAAATCACGATACGA CACGACACGACACGACTGAAGCTCGGTCGAATAGGAGACGCCAGTATCGA AAAAGACGAGGAGAAGGACGCGGAGAGGAAGAAGGAGGGACAGGAGGAGA GCGGCCTGTCGTCATCGTCCATGGAGGAGAAGGAAGTGCTGCTGCGGAGT GTATACCAAGAGGAGCTCGCGCTGAGCGTGGACTGCATCAAGCGCAACCC CAAGTCGTACCCAGCATGGCACCACCACAAATGGGCCTTGGAGAAGGGGC TGCACTTGCTGGGGGAGAGGTAGGGAGGACGAATTCTGGAAGCGGTACGA GCGAGCGACAGCGATGTTATCAAAGGGTTGTGGGTTGTAGGGTGTTGTAG GCTACGGTGTGTACCTCTCTGTCAACATGTTTTTTGGCCATCCCACTTGT CTCACACACACAGACACACGCACGCACACACACACGCACACACACACACA GGTCAATCGCGCTTCACATTTCCCACCCTCCCTTTCTCGTTCTTGTTTGT GTTGCTTTCCTTCTCTTCTCCTCGTTTTCTCTCCTTGCCTTCACGAATGA TGCAAAAATCAAGAGAAGACACTCCCACCTCCCTTCCCCGCCAACACCAA CCGCCATGTTTTGTTTTTTTTTCAGGTCGGCACTGTCAGAGGATCTGGCA CTATGCGCCACGTTTTTGGACCTGGACGGTCGAAATTTCCACTGCTGGGC GCATCGCATGTGGGTGGCAGAGAGGATGGGCCTCTCGGCCCAGGAAGAGT TCGACTTCACCACGGAAAAAATTAAGCAGGTATCATACACTCAGAGAAGT GTGCCGCCGTCGGCTCGCATCATATGATACGTGTGGAAACTACCCTTACA TTACATGCAGCGAGATTGTAGTGAATAATTCTGATGTGCTTGCCAGGTGT GTCACTTTCATTCAAATGATTTTAATAGCATACAGTACGAAGACTAATGT TCTCGGACGGCCTATCGAGCATTTTATTCGACTGACGTCCGAGTGTGAAA AATGTCTCGTTCCGACCAACCCACCCACCCACCCACCAACATCCCGCCGA ACCTCTCGTCGTACTCCTCTTACCAGAACTTCAGCAATTACAGTGCGTTC CACTTCAGGAGCAAGGTTCTGCCGAGGATGGTGGGGGAGATGGGCCACGA CCGGTGGCAGCTGCTTTCCGACGAGCTAGACCTCACCCACGATGTGAGTG TTGCCTGTTGCACCACCCCGGTGTGCTGTGCTTTGATATGATGTGCTGTG CGCTCAATGGATCTGTGAGGTGGACGTGTACTTGGTGCGGTGCGCGCGGC TGTGAGCAACGTCTCTGTAAATCACTGGAGACTCTTGTATGCGGTGTACG CCTGGCGAAATTTTGTGCGTGATTATCATGCTGGGGTTTTTCCAAATGGG GTCAGTCTATTTGTGTTCACTTAACTGCGCAGGCAATGTTCACCGAGCCC GCGGACCAGAGCGTCTGGTGGTACCACCACTTCCTCCTTACTTGGGCCGA GGAGGGTGCCGCCAGTTGCGATACAGAACGTTACCAGGACTTTCTCCGCG CCGAGGCAGCCACCTTGAGGGAGCTGATTGACGTGGAGGGCCGGTGCAAG GTGTGTGACTTCCGTCGACAGTTTTCTAACCATGGGCGGGCCTATGGGGA GGGGCGAGAAGTCCTTTTTTTTTTTTCGTCATGTACATGTGCGCTCTACA TCGCAGATTGAGAGGAACGTGGATGCACTGCTTGCGTTGGCAACTATTGT TTGGTTGTCCCAGTCTCACCAGGTTTGGACCCATGATTATTGTTGTCCTC CCCCCCCCCCCACCCCGCTACCTTCACGTATCTCCATACCTATTTCCATT ATCTCCTTCCCATTATTCAATGCCTGCCTCTCACCGCGCGCGGTACCTTT CACGTGCGTGTCTGTAGTGGGCCGAGCTCGCGCTGCTCCTGGTGTCTCGA CGGCTCGCCAAGGCTCTGGAAGCTGCACAACCGCCACCACAACCGCCGCA TGAAGAAGTTTTCAAGGTCCGGGAGAGCTGCCGCAGCATGGCGTCTCGTC TATCGGAGCTCGACCCGATGCACGGGCGTTTTTACGAATTCGTTGAGCGT GGCGGGTCAGTGTTCGGCATGAAGACTGGCATGAAGACTGGACGCGCCGC TCTCAACGAGACAGATGCGTGAGGGAAAAAAGCGTTACTTTCCAGGGTAT GCGTTCGGGTGGTGGGTGCGCGCAGGCAGGGAAGACAAAAATGAAACCTT TCGCTGTCATCCAGGCATCCAGGAGAGGTGATAGGCACGCACGACATCAG AAGGCACGATCGGCGATGCACGGAGAGAATAGCGGACTGCGCCTCCGGAG AAATAAAGTACCCTCTCCTTGTATCTGGGTATTCTTGAGTCGGATGGCAT TGTGCTGTCACGTTGGAGCTTAAGGTCGGCTTGCCGTGGGGCATCTCTCC GTTGTAGTGACGCTGCACGTGCCGTGCTCACCCCGAAATGGAAGCACGCA CAGCCTGAGTTGCCGTCGGAGTTTGAAAGCACGGAGACAGGCGCTGCCGT TGGGGCGCGGGTGCTGCCAGATATAAAACCAAGTGGAGAGAAGATCAAGG AGTTTGCCTTCAAGGTTGGCAACCTCTTGTGCTCGCATTGTAAAGCTTTC GGCGTTTCTTGAGTGGGCGACGGTGGCTTATTGTCGTTGCCTTTCGTGCA GTACCCAAGCCTTTTTCTTGTTCTGCTTCTCACACATAATAAGCTTGAGA GCGCCACTTAGACGTACGTGTTGCTCTATGTCGGTTGGGAAGATTTTGTT AGAAGCGAGCCCACTCAAAACAATAAATGTCCGTTTGAGATAGAAACCAG CAAAATTATAGACCAGAGAAAAACAGAGAATGGTACTTGAGAAAATAAGG AGGATCTGGCAACCCAGAAGCATCAGCAATGTAAATGTAAGAAAAATGGT GGCTACTGCTGAGCCTCGACCCCAGTTCGACTTCATTTCTTAACTGCAGG GGCGCGAACTGCATGCAGCAGCACAGGCACCGGCGTTGAAGTTGGGATAG CTGATCGTGTCATTGCAACCTGATTGTGCAAGTGTACTTATGTGATGCTG CTGGGGTGTTGAAATAAGTCATGAAAATAAAAATGAAAGAGTGCTTACGG CAGAACAAATCTGACGACGAAAACCACGAGCCGCCTCACTAGCTCAGTCT ATTTGGTGTACTCGGGGAAAGGTGCACGCTGGGACTGAACCGATGCCCTC GTCCCATGTGGTCGCGCGACACTTGCCTGATCCCCGTACTTCTTCGCCCG
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Coding sequence (CDS) from alignment at P-littoralis_Contig83:102402..107201-

>mRNA_P-littoralis_Contig83.32.2 ID=mRNA_P-littoralis_Contig83.32.2|Name=mRNA_P-littoralis_Contig83.32.2|organism=Pylaiella littoralis U1_48|type=CDS|length=1179bp|location=Sequence derived from alignment at P-littoralis_Contig83:102402..107201- (Pylaiella littoralis U1_48)
ATGCACGGCAGGAAGAAGAGCGACCTTCCGCAGACCAAGGAGGAGAAGGA
TGCAGTAAAAGCAAAAATCTCCAACTATGAAAAGGCGAGGCTCAACCCTG
TGGTTGGTGCCATCCGCCACAAGCGCACCAATGGGCAGATGGATGGCGAG
TACAAGCATCTCTTAGGGAAACTCTTGCGCCTACACCCGGACTACTACTC
CATGTGGAACTTCCGTAAGGAGGCTGTGCTAGCGGAGCTCGGTCGAATAG
GAGACGCCAGTATCGAAAAAGACGAGGAGAAGGACGCGGAGAGGAAGAAG
GAGGGACAGGAGGAGAGCGGCCTGTCGTCATCGTCCATGGAGGAGAAGGA
AGTGCTGCTGCGGAGTGTATACCAAGAGGAGCTCGCGCTGAGCGTGGACT
GCATCAAGCGCAACCCCAAGTCGTACCCAGCATGGCACCACCACAAATGG
GCCTTGGAGAAGGGGCTGCACTTGCTGGGGGAGAGGTCGGCACTGTCAGA
GGATCTGGCACTATGCGCCACGTTTTTGGACCTGGACGGTCGAAATTTCC
ACTGCTGGGCGCATCGCATGTGGGTGGCAGAGAGGATGGGCCTCTCGGCC
CAGGAAGAGTTCGACTTCACCACGGAAAAAATTAAGCAGAACTTCAGCAA
TTACAGTGCGTTCCACTTCAGGAGCAAGGTTCTGCCGAGGATGGTGGGGG
AGATGGGCCACGACCGGTGGCAGCTGCTTTCCGACGAGCTAGACCTCACC
CACGATGCAATGTTCACCGAGCCCGCGGACCAGAGCGTCTGGTGGTACCA
CCACTTCCTCCTTACTTGGGCCGAGGAGGGTGCCGCCAGTTGCGATACAG
AACGTTACCAGGACTTTCTCCGCGCCGAGGCAGCCACCTTGAGGGAGCTG
ATTGACGTGGAGGGCCGGTGCAAGTGGGCCGAGCTCGCGCTGCTCCTGGT
GTCTCGACGGCTCGCCAAGGCTCTGGAAGCTGCACAACCGCCACCACAAC
CGCCGCATGAAGAAGTTTTCAAGGTCCGGGAGAGCTGCCGCAGCATGGCG
TCTCGTCTATCGGAGCTCGACCCGATGCACGGGCGTTTTTACGAATTCGT
TGAGCGTGGCGGGTCAGTGTTCGGCATGAAGACTGGCATGAAGACTGGAC
GCGCCGCTCTCAACGAGACAGATGCGTGA
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