prot_P-littoralis_Contig829.18.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig829.18.1
Unique Nameprot_P-littoralis_Contig829.18.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length431
Homology
BLAST of mRNA_P-littoralis_Contig829.18.1 vs. uniprot
Match: D8LGR2_ECTSI (Ribosomal protein L25, Ctc-form n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LGR2_ECTSI)

HSP 1 Score: 306 bits (783), Expect = 9.460e-99
Identity = 177/275 (64.36%), Postives = 200/275 (72.73%), Query Frame = 0
Query:  125 MEEQDSGPVIREMRVKLRPPSEQGSRGARRIRRAGKVPGVVYSTND-----------AGAKQGEPLLVKVDKIVLDREIRRLGASFDNTVYELVVTGESQPEGAQDDQGIDITVQDPAVG-------QPQASAGGPAGGEXXXXXXXGVQPEKEHRELVIANQSTLHPVFRTLLSVNWIRYKAGRKYPVPIKFINHDLNDNFRKGAYIRRRGLKAKTKNGPRALLKTRQNILLPDDPDKVPKWLYLDLEFVRSGNKLRVSDIMMPEGIRLHRGAE 381
            MEE+DSGP+IREMRV++RP  E GSRGARRIRRAGKVPGVVYS +D            G    +P+LVKVDKIVLDRE+RRL ASFDNTVY+LV+ GE+       D GI++TV DP  G       +   SAG   GG   XXXXX   PE+  RELV+ANQS LHPVFRTLLSVNWIRYKAGRKYP+PIKFIN DLN+NFRKGAYIRR              LKT Q+ILLP+DP+ VPKWLYLDLEFVRSG+KLRVSD+MMPEGI LHR  E
Sbjct:    1 MEEEDSGPIIREMRVQVRPRGEYGSRGARRIRRAGKVPGVVYSNSDNRGHSSRPGGGVGRPADDPILVKVDKIVLDREVRRLNASFDNTVYDLVIEGETSSGDDAADDGIEVTVTDPGAGGDRGKEEEEGVSAG--EGGVEGXXXXXXXXPER--RELVLANQSRLHPVFRTLLSVNWIRYKAGRKYPIPIKFINSDLNENFRKGAYIRR--------------LKTHQHILLPEDPEMVPKWLYLDLEFVRSGSKLRVSDLMMPEGILLHRANE 257          
BLAST of mRNA_P-littoralis_Contig829.18.1 vs. uniprot
Match: A0A485LRJ8_9STRA (Aste57867_24188 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LRJ8_9STRA)

HSP 1 Score: 82.8 bits (203), Expect = 2.340e-14
Identity = 63/234 (26.92%), Postives = 102/234 (43.59%), Query Frame = 0
Query:  141 LRPPSEQGSRGARRIRRAGKVPGVVYSTNDAGAKQGEPLLVKVDKIVLDREIRRLGASFDNTVYELVVTGESQPEGAQDDQGIDITVQDPAVGQPQASAGGPAGGEXXXXXXXGVQPEKEHRELVIANQSTLHPVFRTLLSVNWIRYKAGRKYPVPIKFINHDLNDNFRKGAYIRRRGLKAKTKNGPRALLKTRQNILLPDDPDKVPKWLYLDLEFVRSGNKLRVSDIMMPEGI 374
            LRP  + GSR +RR+R  G +PG+VY     G      LLV ++++  +RE R+L  S  N VYE+ V GES P           T++                                    V+    TLHPV    L+VN++RYK GRK  +P+ ++N + +   ++G YI                   R +I      +++P  L++D+  +  G ++ + +I  PEG+
Sbjct:   31 LRPRLKDGSRESRRLRNQGLLPGIVYGEGITG--DATKLLVSMNQVDFEREYRKLRTSMGNQVYEVSV-GESSP-----------TIK------------------------------------VLLRDVTLHPVTDVPLTVNFLRYKPGRKVHIPLDYLNTEGSPGLKRGGYINN----------------VRHDIPCTIASEEIPAKLFVDVNGMHVGERIYLENITFPEGV 198          
BLAST of mRNA_P-littoralis_Contig829.18.1 vs. uniprot
Match: A0A397C844_9STRA (Ribosomal_TL5_C domain-containing protein n=4 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397C844_9STRA)

HSP 1 Score: 75.1 bits (183), Expect = 1.050e-11
Identity = 62/234 (26.50%), Postives = 97/234 (41.45%), Query Frame = 0
Query:  141 LRPPSEQGSRGARRIRRAGKVPGVVYSTNDAGAKQGEPLLVKVDKIVLDREIRRLGASFDNTVYELVVTGESQPEGAQDDQGIDITVQDPAVGQPQASAGGPAGGEXXXXXXXGVQPEKEHRELVIANQSTLHPVFRTLLSVNWIRYKAGRKYPVPIKFINHDLNDNFRKGAYIRRRGLKAKTKNGPRALLKTRQNILLPDDPDKVPKWLYLDLEFVRSGNKLRVSDIMMPEGI 374
            L P  + GSR ARR+R+ G +PG++Y     G      +LV ++++  +RE R+L  S  N VYE V TG+                            GGPA                     V+   +TLHPV     SVN++RYK GRK  +P+ F+N + +   ++G YI                      I      + +P  LY+D+  +  G ++ + +I  PE +
Sbjct:   30 LTPRLKDGSREARRLRKQGLLPGILYGEGVNG--DASRVLVSMNQVDFEREYRKLRTSMGNQVYE-VTTGD----------------------------GGPA-------------------TKVLLRDATLHPVTDIPQSVNFLRYKPGRKVHIPLDFLNQEGSPGLKRGGYINN----------------VYHEIPCTIASEVIPAKLYVDVNGMHVGERIYLENITFPEHV 197          
BLAST of mRNA_P-littoralis_Contig829.18.1 vs. uniprot
Match: A0A3R6YZB1_9STRA (Ribosomal_TL5_C domain-containing protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A3R6YZB1_9STRA)

HSP 1 Score: 75.1 bits (183), Expect = 1.050e-11
Identity = 61/234 (26.07%), Postives = 96/234 (41.03%), Query Frame = 0
Query:  141 LRPPSEQGSRGARRIRRAGKVPGVVYSTNDAGAKQGEPLLVKVDKIVLDREIRRLGASFDNTVYELVVTGESQPEGAQDDQGIDITVQDPAVGQPQASAGGPAGGEXXXXXXXGVQPEKEHRELVIANQSTLHPVFRTLLSVNWIRYKAGRKYPVPIKFINHDLNDNFRKGAYIRRRGLKAKTKNGPRALLKTRQNILLPDDPDKVPKWLYLDLEFVRSGNKLRVSDIMMPEGI 374
            L P  + GSR +RR+R+ G +PG++Y     G      +LV ++++  +RE R+L  S  N VYE V TGE                            GGP                      V+   +TLHPV     SVN++RYK GRK  +P+ F+N + +   ++G YI                      I      + +P  L++D+  +  G ++ + DI  PE +
Sbjct:   29 LTPRLKDGSRESRRLRKQGLLPGILYGEGTNG--DSTRVLVSMNQVDFEREYRKLRTSMGNQVYE-VSTGE----------------------------GGPV-------------------TKVLLRDATLHPVTDVPQSVNFLRYKPGRKVHIPLDFLNQESSPGLKRGGYINN----------------VYHEIPCTIASEAIPTKLFVDVNGMHVGQRIYLEDITFPEHV 196          
BLAST of mRNA_P-littoralis_Contig829.18.1 vs. uniprot
Match: A0A6G0XNP1_9STRA (Ribosomal_TL5_C domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XNP1_9STRA)

HSP 1 Score: 71.2 bits (173), Expect = 2.320e-10
Identity = 57/237 (24.05%), Postives = 100/237 (42.19%), Query Frame = 0
Query:  139 VKLRPPSEQGSRGARRIRRAGKVPGVVYSTNDAGAKQGEPLLVKVDKIVLDREIRRLGASFDNTVYELVVTGESQPEGAQDDQGIDITVQDPAVGQPQASAGGPAGGEXXXXXXXGVQPEKEHRELVIANQSTLHPVFRTLLSVNWIRYKAGRKYPVPIKFINHDLNDNFRKGAYIRRRGLKAKTKNGPRALLKTRQNILLPDDPDKVPKWLYLDLEFVRSGNKLRVSDIMMPEGIR 375
            ++L P  + GSR +RR+R+ G +PG++Y     G      +LV + ++  +RE R+L  S  N VYE+ V G++ P          +T                                      V+    TL PV    L+VN++RYK GRK  +P+ ++N + +   ++G YI                   R  I      +++P  LY+D+  +  G ++ + +I  PE ++
Sbjct:   33 IQLVPRLKDGSRESRRLRKEGLLPGILYGEGSNG--DSSKVLVSMKQVDFEREYRKLRTSMGNQVYEVSV-GDNGP----------VTK-------------------------------------VLLRDVTLDPVTDVPLTVNFLRYKPGRKVYIPLDYLNMEGSPGLKRGGYINN----------------VRHEIPCTISSEEIPAKLYVDVNGMHVGERIYLENITFPEHVK 203          
BLAST of mRNA_P-littoralis_Contig829.18.1 vs. uniprot
Match: A0A024G2B8_9STRA (Cleavage and polyadenylation specificity factor subunit 2 n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024G2B8_9STRA)

HSP 1 Score: 67.0 bits (162), Expect = 3.900e-8
Identity = 56/230 (24.35%), Postives = 90/230 (39.13%), Query Frame = 0
Query:  145 SEQGSRGARRIRRAGKVPGVVYSTNDAGAKQGEPLLVKVDKIVLDREIRRLGASFDNTVYELVVTGESQPEGAQDDQGIDITVQDPAVGQPQASAGGPAGGEXXXXXXXGVQPEKEHRELVIANQSTLHPVFRTLLSVNWIRYKAGRKYPVPIKFINHDLNDNFRKGAYIRRRGLKAKTKNGPRALLKTRQNILLPDDPDKVPKWLYLDLEFVRSGNKLRVSDIMMPEGI 374
            ++ GSR +R++R+ G +PG++Y     G      +L+ + K + DR  R+L  S DN V++                                                 VQ E +   L I      HPV    L+VN+IRYK GRK  +PI +IN + +   ++G YI                      +    + D+VPK L +D+  +   +K  +  I  P+GI
Sbjct:  757 TQDGSRASRKLRQKGMLPGILYGEGMDG--DDNKVLISLKKTLFDRLHRKLWTSIDNQVFK-------------------------------------------------VQVEDQPPVLAIMRDVQFHPVTDLPLTVNFIRYKHGRKVSIPITYINEEGSPGLKRGGYINH----------------ICHEVECYVNTDQVPKTLEIDVNGLDVDSKFFLETISFPDGI 919          
BLAST of mRNA_P-littoralis_Contig829.18.1 vs. uniprot
Match: F0WKB2_9STRA (50S ribosomal protein L25 putative n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WKB2_9STRA)

HSP 1 Score: 64.3 bits (155), Expect = 5.840e-8
Identity = 55/230 (23.91%), Postives = 91/230 (39.57%), Query Frame = 0
Query:  145 SEQGSRGARRIRRAGKVPGVVYSTNDAGAKQGEPLLVKVDKIVLDREIRRLGASFDNTVYELVVTGESQPEGAQDDQGIDITVQDPAVGQPQASAGGPAGGEXXXXXXXGVQPEKEHRELVIANQSTLHPVFRTLLSVNWIRYKAGRKYPVPIKFINHDLNDNFRKGAYIRRRGLKAKTKNGPRALLKTRQNILLPDDPDKVPKWLYLDLEFVRSGNKLRVSDIMMPEGI 374
            ++ GSR AR++R+ G +PG++Y     G      +LV ++K + DR  R+L  S DN V++                                                 VQ + +   L I      HPV    L+VN+IRYK GRK  +PI +IN + +   ++G YI                      +    + ++VPK L +D+  +   +K  +  I  P+G+
Sbjct:   45 TQDGSRAARKLRKKGYLPGLLYGEGMNG--DDTKVLVSLEKKLFDRLHRKLWTSIDNQVFK-------------------------------------------------VQVKDQPPILAIMRDVQFHPVTDIPLTVNFIRYKNGRKVSIPITYINEEGSPGIKRGGYINH----------------IYHEVECYINTEQVPKTLEIDVNGLDVDSKFFLETISFPDGV 207          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig829.18.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
D8LGR2_ECTSI9.460e-9964.36Ribosomal protein L25, Ctc-form n=2 Tax=Ectocarpus... [more]
A0A485LRJ8_9STRA2.340e-1426.92Aste57867_24188 protein n=1 Tax=Aphanomyces stella... [more]
A0A397C844_9STRA1.050e-1126.50Ribosomal_TL5_C domain-containing protein n=4 Tax=... [more]
A0A3R6YZB1_9STRA1.050e-1126.07Ribosomal_TL5_C domain-containing protein n=2 Tax=... [more]
A0A6G0XNP1_9STRA2.320e-1024.05Ribosomal_TL5_C domain-containing protein n=1 Tax=... [more]
A0A024G2B8_9STRA3.900e-824.35Cleavage and polyadenylation specificity factor su... [more]
F0WKB2_9STRA5.840e-823.9150S ribosomal protein L25 putative n=1 Tax=Albugo ... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR029751Ribosomal protein L25PFAMPF01386Ribosomal_L25pcoord: 140..210
e-value: 2.8E-7
score: 30.9
IPR020056Ribosomal protein L25/Gln-tRNA synthetase, N-terminalGENE3D2.40.240.10Ribosomal Protein L25; Chain Pcoord: 136..224
e-value: 2.3E-7
score: 32.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 211..261
NoneNo IPR availablePANTHERPTHR33284:SF1RIBOSOMAL PROTEIN L25/GLN-TRNA SYNTHETASE, ANTI-CODON-BINDING DOMAIN-CONTAINING PROTEINcoord: 135..378
NoneNo IPR availablePANTHERPTHR33284RIBOSOMAL PROTEIN L25/GLN-TRNA SYNTHETASE, ANTI-CODON-BINDING DOMAIN-CONTAINING PROTEINcoord: 135..378
IPR011035Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamilySUPERFAMILY50715Ribosomal protein L25-likecoord: 143..213
IPR011035Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamilySUPERFAMILY50715Ribosomal protein L25-likecoord: 260..378

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig829contigP-littoralis_Contig829:58471..70467 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig829.18.1mRNA_P-littoralis_Contig829.18.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig829 57785..70563 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig829.18.1 ID=prot_P-littoralis_Contig829.18.1|Name=mRNA_P-littoralis_Contig829.18.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=431bp
MLGRIAVATSRRSTALASNACSSGGPRQQAVRSVTSSLLVCGRHNSSDHG
SKTGAQAARIAASGAAGNADVVVPPSRTRRVSFSSSSAAAAVVAEEAASL
TTTASPKLVYGIPKENDDVVRTPPMEEQDSGPVIREMRVKLRPPSEQGSR
GARRIRRAGKVPGVVYSTNDAGAKQGEPLLVKVDKIVLDREIRRLGASFD
NTVYELVVTGESQPEGAQDDQGIDITVQDPAVGQPQASAGGPAGGESSEE
GGGGVQPEKEHRELVIANQSTLHPVFRTLLSVNWIRYKAGRKYPVPIKFI
NHDLNDNFRKGAYIRRRGLKAKTKNGPRALLKTRQNILLPDDPDKVPKWL
YLDLEFVRSGNKLRVSDIMMPEGIRLHRGAESSKRKYLSRLRNRFLGCDP
PVSSSISRAGTHTRPLPVQQSHVLAGCVDG*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR029751Ribosomal_L25
IPR020056Rbsml_L25/Gln-tRNA_synth_N
IPR011035Ribosomal_L25/Gln-tRNA_synth