prot_P-littoralis_Contig828.12.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig828.12.1
Unique Nameprot_P-littoralis_Contig828.12.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length82
Homology
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BLAST of mRNA_P-littoralis_Contig828.12.1 vs. uniprot
Match: A0A6H5JVH8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVH8_9PHAE)

HSP 1 Score: 50.1 bits (118), Expect = 3.720e-5
Identity = 35/82 (42.68%), Postives = 48/82 (58.54%), Query Frame = 0 
Query:    1 MRTLLHKCEAFLRDGMAQSAHEATRDISAAKMLAAAVAVENNWAELTRP-YLKSQANKGVGRKSAIRKLAKKRSQWENAATA 81
            +R    +   +L  G  Q A   +RD+  A  ++ AV   +   E+ RP +LK Q+N+GVGRK A+RKLAK RSQ E AA A
Sbjct:  158 LRQAAQQLNYYLERGQLQCAQMVSRDLPGA--MSYAVKEAHQQEEVYRPAFLKRQSNRGVGRKEALRKLAKHRSQLEKAAVA 237
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig828.12.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JVH8_9PHAE3.720e-542.68Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig828contigP-littoralis_Contig828:51481..51726 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig828.12.1mRNA_P-littoralis_Contig828.12.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig828 51481..51726 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig828.12.1 ID=prot_P-littoralis_Contig828.12.1|Name=mRNA_P-littoralis_Contig828.12.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=82bp
MRTLLHKCEAFLRDGMAQSAHEATRDISAAKMLAAAVAVENNWAELTRPY
LKSQANKGVGRKSAIRKLAKKRSQWENAATAA
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