prot_P-littoralis_Contig828.43.2 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig828.43.2
Unique Nameprot_P-littoralis_Contig828.43.2
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length1078
Homology
BLAST of mRNA_P-littoralis_Contig828.43.2 vs. uniprot
Match: D7FS85_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FS85_ECTSI)

HSP 1 Score: 112 bits (280), Expect = 2.500e-21
Identity = 153/393 (38.93%), Postives = 170/393 (43.26%), Query Frame = 0
Query:  279 ARLADLCKEDKAKVARLMQDLVKLRAGKDAQKARFERLRAQNESIVKEMAALKLRFGQSMQLLRKYQRIQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNA---------GRAAMTEELRRAREQAEELRRQLDDHPTEAKASSATAAEDAXXXXXXXATAAD--------ARQGPIGPTAV-----STGRTGSQSARFPNDPART--PAAATG------AAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAGDSTXXXXXXXXXXXX------------------------PPERQRSE---RGEARGGGVASVAELASVKAQVETLKQQLVMAGVQQLALTGVPTGAALLS 614
            ARLA+LCKEDK KVARLMQDLVKLR  K+ QK RFERLRAQNESIVK+MA LK +FGQSMQLLRKYQ I                   XXXXXX     XXXXXXXXXXXXXX                   A         GR AM EELR+AR QA+ELRRQLD H       S  AA +            +        + Q P+ P        +T    + +A  P+    T  P   TG      A                                       GD T                                    PP  +R      GEA  G   SV EL  VK Q+E LKQQLVM GVQQLALTGV TGAALL+
Sbjct:  236 ARLAELCKEDKTKVARLMQDLVKLRQEKEGQKTRFERLRAQNESIVKQMAGLKDKFGQSMQLLRKYQSIVQEGGAADEGGGVGVRGKGXXXXXXKRLEKXXXXXXXXXXXXXXAEIQALRETLRLAEESTRKAEAEAAAQRSGRTAMAEELRQARGQADELRRQLDHHRRLQARDSPVAAREGPRRNDLGLLGGEGAHSSGPASHQQPVAPLLAPVHDHATKGVSNATAASPSAAVDTAEPLPGTGGKEGVAAVVRGADGRAVSISGEEKPSAPSGGVVLVSPGGGRTTGPGGDITGGNFGVVGRGGGVNPPPPIXXXXXXXXXXXXRGCPPPPSPKRVRPCLEGEAVPGAAFSV-ELDPVKEQMEILKQQLVMVGVQQLALTGVRTGAALLN 627          
BLAST of mRNA_P-littoralis_Contig828.43.2 vs. uniprot
Match: A0A6H5K9R0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9R0_9PHAE)

HSP 1 Score: 109 bits (272), Expect = 2.460e-20
Identity = 137/406 (33.74%), Postives = 154/406 (37.93%), Query Frame = 0
Query:  279 ARLADLCKEDKAKVARLMQDLVKLRAGKDAQKARFERLRAQNESIVKEMAALKLRFGQSMQLLRKYQRIQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNAG-----RAAMTEELRRAREQAEELRRQLDDHPTEAKASSATAAEDAXXXXXXXATAAD--------ARQGPIGPTAVS-----TGRTGSQSARFPNDPARTPAAATGAAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAGDSTXXXXXXXXXXXXPPERQRSERGEARGG--GVA--------------------------------------------------SVAELASVKAQVETLKQQLVMAGVQQLALTGVPTGAALLS 614
            ARLA+LC+EDK KVARLMQDLVKLR  K+ QK RFERLRAQNESIVKEMA LK++FGQSMQLLRKYQ I          XX      XXXX                         X               A      R AM EELR+AR QA+ELRRQLD H       S  AA +            +        + Q P+ P         T    + +A  P+    T     G                                      A G  T                     G+  GG  GVA                                                  S AEL +VK Q+E LKQQLVM GVQQLALTGVPTGAALLS
Sbjct:  325 ARLAELCQEDKTKVARLMQDLVKLRQEKEGQKTRFERLRAQNESIVKEMAGLKVKFGQSMQLLRKYQSIVQEGGAPGGGXXVGVRGKXXXXGACKRLEKQEAAATAAAAEIQALREXPSAKRRESARKAEAEAAVQRSDRTAMAEELRQARGQADELRRQLDHHRRLQARDSPAAAREGPRRNDLGLLRGEGPHSVGPVSHQQPVAPLLARVHDHVTEGVSNATAAPPSAAVNTAEPLPGTGGKEGAAAVVRDADGRAVSISGEEKPPARSGGVVPVSAGGGRTTGPG-----------------GDITGGKLGVAGSGSXXQPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSAELDAVKEQMEVLKQQLVMVGVQQLALTGVPTGAALLS 713          
BLAST of mRNA_P-littoralis_Contig828.43.2 vs. uniprot
Match: A0A835Z7B7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7B7_9STRA)

HSP 1 Score: 61.6 bits (148), Expect = 5.760e-6
Identity = 37/67 (55.22%), Postives = 45/67 (67.16%), Query Frame = 0
Query:  279 ARLADLCKEDKAKVARLMQDLVKLRAGKDAQKARFERLRAQNESIVKEMAALKLRFGQSMQLLRKYQ 345
            ARL DLC  DKAKVA+LMQ+L   +A   A+  R ERLRAQN  IV E A  + R  Q++ LL+KYQ
Sbjct:   44 ARLVDLCPSDKAKVAKLMQELSAAQAEAAARAHRLERLRAQNAEIVAETADTRSRLTQAVLLLKKYQ 110          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig828.43.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FS85_ECTSI2.500e-2138.93Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K9R0_9PHAE2.460e-2033.74Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835Z7B7_9STRA5.760e-655.22Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 306..333
NoneNo IPR availableCOILSCoilCoilcoord: 413..440
NoneNo IPR availableCOILSCoilCoilcoord: 337..357
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 844..954
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 790..830
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 89..148
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 473..489
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 870..907
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 926..948
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 351..575
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 507..521
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 700..714
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 446..462
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 612..765
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..148
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 648..671
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 417..439
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 527..545
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 622..642
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1046..1061
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1046..1078

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig828contigP-littoralis_Contig828:110518..119335 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig828.43.2mRNA_P-littoralis_Contig828.43.2Pylaiella littoralis U1_48mRNAP-littoralis_Contig828 110518..119335 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig828.43.2 ID=prot_P-littoralis_Contig828.43.2|Name=mRNA_P-littoralis_Contig828.43.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=1078bp
PQTKQRFSPVGPPGWNRDYHGGGDDGSSPPSTKGRAPPFSVGGGGTGGRS
CSGSGRGGNGGGGGFGKGEAEALLARLAGKAKQAAAAALSASAASSSSSS
SLLSSGAAAAATPHSTGTPPSTMTPLLPRTGTPPQLGNSNWTNAYNVAAP
PKSSGPVTVVPGVGSRLTTLDDSSTTAPTTATAAASSASSTSTVAAYTPH
GTGGYLGASTERGNQITGEDYSGDKKAAAPAAAAVATTAGMRGPGVAAAT
AATAAAAAAAAVVDRGAGDAAARGGGGGARLADLCKEDKAKVARLMQDLV
KLRAGKDAQKARFERLRAQNESIVKEMAALKLRFGQSMQLLRKYQRIQQQ
QQQQQQQQMQQGRGGAAGDGKGAGGDDSCGSSGGGKSPQQASRRTETREE
EAAAAAAAGNAGRAAMTEELRRAREQAEELRRQLDDHPTEAKASSATAAE
DASATASANATAADARQGPIGPTAVSTGRTGSQSARFPNDPARTPAAATG
AAPAAPAPTPAAAPGPAADPGPAPASATASATASATATAAGDSTTTAAAA
AAAAATPPERQRSERGEARGGGVASVAELASVKAQVETLKQQLVMAGVQQ
LALTGVPTGAALLSPHNETAPFRHPGPFPPPPPPPPPPVPWDAVGSSAAA
DGSNSGQRTFRGSSGSSGGSCSAVAERAMGSGSTGLSPPVGAAARRGGDG
SWKMHTHWERHQQQHQQQHQQVQRNTRVTRDVVDGALEEQPGGGGSGEPS
SMVGDNAMIKGARGARVGSDNTANCGRGVRAVGGDTGGAAAAAAGGGEEG
SGERGGGVWKEEVLGGGVTQGAPDEEEEGVGWWARSADKLLLLAPGEEGK
GTAGGEGEAREAAAFGSGRIGRASSTSSHSSSRGSSSRRSSSSSVTATTT
ANGTATKEAMQRIAAGAVAARDGRGGGDGDYGDGDGDGDDDGKHRSNPTP
HGRVVPLAEQHTFPPVAPPVRSMKRAAGMMAATGGRHAYRTQEAEMIHRR
YRYGSGAERIVGGSSAGSAVAAAAAAAAAAAAAMSGGGATLLRDSWSSVG
ARSSESDLTQEFATAAAAPVSGATSTRN
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