mRNA_P-littoralis_Contig828.43.2 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_P-littoralis_Contig828.43.2
Unique Name	mRNA_P-littoralis_Contig828.43.2
Type	mRNA
Organism	Pylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))

Homology

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BLAST of mRNA_P-littoralis_Contig828.43.2 vs. uniprot
Match: D7FS85_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FS85_ECTSI)

HSP 1 Score: 112 bits (280), Expect = 2.500e-21
Identity = 153/393 (38.93%), Postives = 170/393 (43.26%), Query Frame = 1

Query:  835 ARLADLCKEDKAKVARLMQDLVKLRAGKDAQKARFERLRAQNESIVKEMAALKLRFGQSMQLLRKYQRIQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNA---------GRAAMTEELRRAREQAEELRRQLDDHPTEAKASSATAAEDAXXXXXXXATAAD--------ARQGPIGPTAV-----STGRTGSQSARFPNDPART--PAAATG------AAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAGDSTXXXXXXXXXXXX------------------------PPERQRSE---RGEARGGGVASVAELASVKAQVETLKQQLVMAGVQQLALTGVPTGAALLS 1842
            ARLA+LCKEDK KVARLMQDLVKLR  K+ QK RFERLRAQNESIVK+MA LK +FGQSMQLLRKYQ I                   XXXXXX     XXXXXXXXXXXXXX                   A         GR AM EELR+AR QA+ELRRQLD H       S  AA +            +        + Q P+ P        +T    + +A  P+    T  P   TG      A                                       GD T                                    PP  +R      GEA  G   SV EL  VK Q+E LKQQLVM GVQQLALTGV TGAALL+
Sbjct:  236 ARLAELCKEDKTKVARLMQDLVKLRQEKEGQKTRFERLRAQNESIVKQMAGLKDKFGQSMQLLRKYQSIVQEGGAADEGGGVGVRGKGXXXXXXKRLEKXXXXXXXXXXXXXXAEIQALRETLRLAEESTRKAEAEAAAQRSGRTAMAEELRQARGQADELRRQLDHHRRLQARDSPVAAREGPRRNDLGLLGGEGAHSSGPASHQQPVAPLLAPVHDHATKGVSNATAASPSAAVDTAEPLPGTGGKEGVAAVVRGADGRAVSISGEEKPSAPSGGVVLVSPGGGRTTGPGGDITGGNFGVVGRGGGVNPPPPIXXXXXXXXXXXXRGCPPPPSPKRVRPCLEGEAVPGAAFSV-ELDPVKEQMEILKQQLVMVGVQQLALTGVRTGAALLN 627

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BLAST of mRNA_P-littoralis_Contig828.43.2 vs. uniprot
Match: A0A6H5K9R0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9R0_9PHAE)

HSP 1 Score: 109 bits (272), Expect = 2.460e-20
Identity = 137/406 (33.74%), Postives = 154/406 (37.93%), Query Frame = 1

Query:  835 ARLADLCKEDKAKVARLMQDLVKLRAGKDAQKARFERLRAQNESIVKEMAALKLRFGQSMQLLRKYQRIQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNAG-----RAAMTEELRRAREQAEELRRQLDDHPTEAKASSATAAEDAXXXXXXXATAAD--------ARQGPIGPTAVS-----TGRTGSQSARFPNDPARTPAAATGAAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAGDSTXXXXXXXXXXXXPPERQRSERGEARGG--GVA--------------------------------------------------SVAELASVKAQVETLKQQLVMAGVQQLALTGVPTGAALLS 1842
            ARLA+LC+EDK KVARLMQDLVKLR  K+ QK RFERLRAQNESIVKEMA LK++FGQSMQLLRKYQ I          XX      XXXX                         X               A      R AM EELR+AR QA+ELRRQLD H       S  AA +            +        + Q P+ P         T    + +A  P+    T     G                                      A G  T                     G+  GG  GVA                                                  S AEL +VK Q+E LKQQLVM GVQQLALTGVPTGAALLS
Sbjct:  325 ARLAELCQEDKTKVARLMQDLVKLRQEKEGQKTRFERLRAQNESIVKEMAGLKVKFGQSMQLLRKYQSIVQEGGAPGGGXXVGVRGKXXXXGACKRLEKQEAAATAAAAEIQALREXPSAKRRESARKAEAEAAVQRSDRTAMAEELRQARGQADELRRQLDHHRRLQARDSPAAAREGPRRNDLGLLRGEGPHSVGPVSHQQPVAPLLARVHDHVTEGVSNATAAPPSAAVNTAEPLPGTGGKEGAAAVVRDADGRAVSISGEEKPPARSGGVVPVSAGGGRTTGPG-----------------GDITGGKLGVAGSGSXXQPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSAELDAVKEQMEVLKQQLVMVGVQQLALTGVPTGAALLS 713

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BLAST of mRNA_P-littoralis_Contig828.43.2 vs. uniprot
Match: A0A835Z7B7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7B7_9STRA)

HSP 1 Score: 61.6 bits (148), Expect = 5.760e-6
Identity = 37/67 (55.22%), Postives = 45/67 (67.16%), Query Frame = 1

Query:  835 ARLADLCKEDKAKVARLMQDLVKLRAGKDAQKARFERLRAQNESIVKEMAALKLRFGQSMQLLRKYQ 1035
            ARL DLC  DKAKVA+LMQ+L   +A   A+  R ERLRAQN  IV E A  + R  Q++ LL+KYQ
Sbjct:   44 ARLVDLCPSDKAKVAKLMQELSAAQAEAAARAHRLERLRAQNAEIVAETADTRSRLTQAVLLLKKYQ 110

The following BLAST results are available for this feature:

BLAST of mRNA_P-littoralis_Contig828.43.2 vs. uniprot

BLAST of mRNA_P-littoralis_Contig828.43.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 3


Match Name	E-value	Identity	Description
D7FS85_ECTSI	2.500e-21	38.93	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5K9R0_9PHAE	2.460e-20	33.74	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A835Z7B7_9STRA	5.760e-6	55.22	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-littoralis_Contig828	contig	P-littoralis_Contig828:110518..119335 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
Pylaiella littoralis U1_48 OGS1.0	2022-07-08

Properties


Property Name	Value
Stop	0
Start	0
Model size	3234
Hectar predicted targeting category	other localisation
Exons	4
Ec32 ortholog description	expressed unknown protein
Ec32 ortholog	Ec-05_004990.1
Cds size	3234

Relationships

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1680791685.067714-CDS-P-littoralis_Contig828:110517..111552	1680791685.067714-CDS-P-littoralis_Contig828:110517..111552	Pylaiella littoralis U1_48	CDS	P-littoralis_Contig828 110518..111552 +
1680791685.078471-CDS-P-littoralis_Contig828:113655..113904	1680791685.078471-CDS-P-littoralis_Contig828:113655..113904	Pylaiella littoralis U1_48	CDS	P-littoralis_Contig828 113656..113904 +
1680791685.0889075-CDS-P-littoralis_Contig828:116187..116658	1680791685.0889075-CDS-P-littoralis_Contig828:116187..116658	Pylaiella littoralis U1_48	CDS	P-littoralis_Contig828 116188..116658 +
1680791685.0996435-CDS-P-littoralis_Contig828:117856..119335	1680791685.0996435-CDS-P-littoralis_Contig828:117856..119335	Pylaiella littoralis U1_48	CDS	P-littoralis_Contig828 117857..119335 +

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_P-littoralis_Contig828.43.2	prot_P-littoralis_Contig828.43.2	Pylaiella littoralis U1_48	polypeptide	P-littoralis_Contig828 110518..119335 +

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at P-littoralis_Contig828:110518..119335+
coding sequence from alignment at P-littoralis_Contig828:110518..119335+

protein sequence of mRNA_P-littoralis_Contig828.43.2

>prot_P-littoralis_Contig828.43.2 ID=prot_P-littoralis_Contig828.43.2|Name=mRNA_P-littoralis_Contig828.43.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=1078bp
PQTKQRFSPVGPPGWNRDYHGGGDDGSSPPSTKGRAPPFSVGGGGTGGRS
CSGSGRGGNGGGGGFGKGEAEALLARLAGKAKQAAAAALSASAASSSSSS
SLLSSGAAAAATPHSTGTPPSTMTPLLPRTGTPPQLGNSNWTNAYNVAAP
PKSSGPVTVVPGVGSRLTTLDDSSTTAPTTATAAASSASSTSTVAAYTPH
GTGGYLGASTERGNQITGEDYSGDKKAAAPAAAAVATTAGMRGPGVAAAT
AATAAAAAAAAVVDRGAGDAAARGGGGGARLADLCKEDKAKVARLMQDLV
KLRAGKDAQKARFERLRAQNESIVKEMAALKLRFGQSMQLLRKYQRIQQQ
QQQQQQQQMQQGRGGAAGDGKGAGGDDSCGSSGGGKSPQQASRRTETREE
EAAAAAAAGNAGRAAMTEELRRAREQAEELRRQLDDHPTEAKASSATAAE
DASATASANATAADARQGPIGPTAVSTGRTGSQSARFPNDPARTPAAATG
AAPAAPAPTPAAAPGPAADPGPAPASATASATASATATAAGDSTTTAAAA
AAAAATPPERQRSERGEARGGGVASVAELASVKAQVETLKQQLVMAGVQQ
LALTGVPTGAALLSPHNETAPFRHPGPFPPPPPPPPPPVPWDAVGSSAAA
DGSNSGQRTFRGSSGSSGGSCSAVAERAMGSGSTGLSPPVGAAARRGGDG
SWKMHTHWERHQQQHQQQHQQVQRNTRVTRDVVDGALEEQPGGGGSGEPS
SMVGDNAMIKGARGARVGSDNTANCGRGVRAVGGDTGGAAAAAAGGGEEG
SGERGGGVWKEEVLGGGVTQGAPDEEEEGVGWWARSADKLLLLAPGEEGK
GTAGGEGEAREAAAFGSGRIGRASSTSSHSSSRGSSSRRSSSSSVTATTT
ANGTATKEAMQRIAAGAVAARDGRGGGDGDYGDGDGDGDDDGKHRSNPTP
HGRVVPLAEQHTFPPVAPPVRSMKRAAGMMAATGGRHAYRTQEAEMIHRR
YRYGSGAERIVGGSSAGSAVAAAAAAAAAAAAAMSGGGATLLRDSWSSVG
ARSSESDLTQEFATAAAAPVSGATSTRN

mRNA from alignment at P-littoralis_Contig828:110518..119335+

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_P-littoralis_Contig828.43.2 ID=mRNA_P-littoralis_Contig828.43.2|Name=mRNA_P-littoralis_Contig828.43.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=8818bp|location=Sequence derived from alignment at P-littoralis_Contig828:110518..119335+ (Pylaiella littoralis U1_48)
CCGCAAACAAAGCAGCGATTCTCGCCGGTCGGTCCTCCGGGGTGGAATCG
AGACTACCACGGCGGCGGTGATGACGGCTCCTCGCCTCCTTCGACGAAAG
GACGTGCGCCGCCATTTAGTGTAGGCGGTGGTGGAACTGGCGGCCGCAGC
TGCAGCGGCAGCGGCAGGGGCGGCAATGGTGGCGGCGGTGGATTTGGCAA
GGGAGAGGCAGAGGCACTGCTCGCGCGGCTAGCCGGCAAGGCCAAGCAAG
CGGCGGCTGCGGCACTGTCGGCATCGGCGGCATCGTCATCATCATCATCA
TCATTATTATCATCAGGAGCAGCAGCAGCAGCAACGCCTCATTCTACCGG
TACCCCGCCTTCGACGATGACGCCCCTGCTACCGCGTACCGGGACTCCCC
CGCAGCTGGGCAATAGCAACTGGACGAACGCTTACAATGTCGCCGCGCCG
CCGAAATCATCGGGACCGGTAACCGTAGTGCCGGGAGTGGGAAGCCGCCT
GACAACCTTGGATGACAGTTCTACTACTGCTCCCACCACTGCTACTGCTG
CTGCCAGCTCTGCTAGCTCTACTAGCACCGTTGCAGCATACACTCCCCAT
GGGACTGGAGGTTACCTCGGCGCCTCCACAGAGCGCGGCAACCAAATCAC
AGGGGAGGATTATAGCGGCGATAAAAAGGCTGCAGCTCCTGCTGCTGCTG
CAGTGGCCACCACGGCGGGAATGAGGGGGCCGGGCGTGGCTGCGGCAACA
GCGGCGACGGCGGCAGCAGCAGCTGCGGCAGCTGTCGTCGATAGAGGAGC
AGGGGACGCGGCAGCCCGGGGCGGCGGCGGCGGCGCGAGGCTGGCGGACC
TGTGCAAGGAAGACAAGGCGAAAGTGGCCCGCCTGATGCAGGACCTCGTT
AAGCTGAGGGCTGGCAAGGACGCCCAGAAGGCCCGGTTCGAGCGGCTCCG
GGCGCAGAACGAGTCGATAGTGAAGGAGATGGCGGCGCTCAAGCTCAGGT
TCGGGCAGAGCATGCAGCTTCTCAGGAAGTACCAGGTAAATAAATAGTGG
GTGGGTTATCTTTTTCATCAGGACGTGTTTATCATGGTGTGCGCGTGTTT
TTGGGGGTGTATCGATCTCCTGTGTACACGCCCACGTTGTGGTGACCTCT
TTCAGCTGTGGGAATTTGATATTTACATACATACTTGTACGTCTAATAGC
CAAATCGATCTTCAAAATTTGATCGGTGAGGCGTGATTTTCATGCCGTGC
TGTACTACTACATCCACATAGATATATACGTCGAATAGCCAAATCGATCT
TCAAAACTTGGTCGGTGAGGCGTGATTTTCATGCCGTGCTGTTATTGTGC
GCGGGGACTTTCACATCGATCTCGCAACGCCGGCTGCTGGTTGCCATGTT
GGCTGAAGTGAAGATGGCGGGTGTCAGTTGGAACCCGATCATGTGAAGAA
CTGAAAGATGGCGAATGTCAGTCAAAACCCGATCGTAAGTTTGACAGCGT
GTTGGGTTGTGTATGCGCGGGTCGTGGTCCTCTGTGTTTGATCTCACACG
CCGCGGATTCAGTGCTCGTTGGAATGGTGATGGCGGCTGCCGAACCACGA
CTGGCTACTGTAGCGTGGTGTGTGGAATCATAGGTGTGTGGATCGTGCTC
CTGTGTGCTCTGGCTAAACGCCGGCTGATTCAATGTTGATCGGATCGAAG
ATGGTGGGTGTCCAAACCCCGATAGCACAGCACAAGGTACAGCGGTAGTT
TTGGTTTTGGTTCATGCATGACACCGTTATTAGGTCGCACAAGATACCAT
CCACGGGACCCCCTGGACGAATAATTCTGAAAGCTCGATCGTGATCATCC
TGTCGTACGGTCGTTCCACTCCACAGCACAAAAGAAACGTGTGTAACGTC
GTGTGATGTCGTGTGATGTCGGTGCTGTGTCGAAAGGGCCACAAACCGAC
CAACCGATCAGAACCATCTTTGAATATCTCGTCGAGCACCCCGACACTTT
CCTACGGTATGATATGGTATGGTATGGTATGGTATGGTATGGTATGGTAT
GGTATGGTATGGTATGGTATGGTATGGTATGGTATGGTATGGTATGGTAT
GGTATGGTATGGTATGGCATGGCATGGTATGATATGGTTTGGTATGGTAG
GCAGGTATGGTATGGTATGGTATAGCATGGTATGGTTTGGTACAGTATGC
TATGGTATGCTTTAGTACGGTATGGTAACGTGTATGGGGCCGTGGTAAGC
TATGGTATGATACGCATCGGTTGGATATTGTTTATTCCACATCATTAGAT
GTTGGTTACTCTATCTCGTACGGCAGAAAGAAGGAGCGGTGTGATGTGAT
GTGATGTTGTGTGATGCGATATGTGATTTGATGCGATGTCGGTGCTGTAT
CGGAAAGGGCAACCGACGGACTGACTGACTGACCTACCGACCGACCAACC
AGCATTAGGTGAAATCATTTATCTCGTCGAGAGCTGCAGTAGCTAGCTTT
CCGAAAATACAAAGCAGAAATCGTTTGATGTTGATCGGTGGTGCCCTCTT
CGCCTGTGCCGTCCGCGTGTTCGAGCTTTTAAAACATGGGAAAAGTGCAT
TATTATCTGATGAGTCATACATTGAAACACGGGTATCATACTGTAGAGTC
TTTTTCCCCTTGTTCTTTGTGTTCGTCTTAAATCTACTCCAGACCCTCGT
TTCGAGAGAGGTAAACTCGTTGATTTGTTTGTAAGAAAATTAAAAATAAT
TCGGAAAAGGGTGACCGACGGACAGCCGAACAGGATGACCGACCGACCGA
CCCACCGACCGACCGGCCGACATCGGAACTTTCTTTCTCGTCTAGAGCGA
CCATTTTGGGAAACAAAGAAAAATGTGGTTGATGTTGGCAGGCTATCTCT
TCGTTGGCGGAGAAAAAATCCAGCGGTTGAAAGTCGGTCCAGCGAGTCCC
GTTGTGGTGCCTTGTTAGTTGTGCGAGACGTGCGGTACCCCCCTCCCCCC
GGTACCGGTACCCCCCCGCGATGGAAAAACATGCTTGGCATGAAGCCGGC
CGCATGGATGCGTCCATTCATCCTGTCGCGCTCCCCCCCCTCAATCAACA
CGCGTTGTTTCTTGTCTGCCTGTCATCGACTATCGAAGCGCATTCAGCAG
CAGCAGCAGCAGCAGCAGCAGCAGCAGATGCAGCAGGGGAGGGGGGGAGC
GGCCGGCGACGGAAAGGGCGCGGGCGGCGATGATTCATGCGGTTCCAGTG
GTGGCGGGAAGTCCCCGCAACAAGCGTCTCGAAGAACGGAGACAAGGGAG
GAGGAGGCGGCGGCGGCGGCGGCGGCAGGAAACGCCGGCCGTGCGGCGAT
GACAGAGGAGCTGCGAAGGGCGAGAGAACAGGCAGAAGTGAGAAGAGGCC
CCGTTATTTTCTGTTTGTCCCAACATTTTACTTAGGTATACCCTATGATC
CCTCGCGTTTTTTGTTTTTGTTTGTTTTTGTTTTTGTTTTCCTGTCATTT
GTGCGCTGCTGTCGCCTGTGTATCTGGTGTGTGTTTGGCACACGTTGCTT
TCGTGCCGTTTTTTTTCGTCACTGCTCCCTTGACTGTCACCTTGTTGTTT
TATGTTTTGTCGATAGTCATCGTTGTGTTGGTCTATCTCTCGCCTATTTT
TTCTCTTTCGGCTTGCTTTTTCGAGAGTAGGGTGGGGATTCGACGCCATT
TGTAGGGGGGGAGTGGGGAGGCGCAGTCATTGAATTCGAGTCCTACAGCC
AGCCGTCGCCTACTCATTCTGGCCTCTCACTTCCAAATGGCCGACTACGC
TCGTCAAGGACGCCTACCACAATGAAATCCGCTTCTTCAAAGTGCACGTC
CGCGCGATTATTGTCGGTAGATGTTGTGCTGGTCTATATGTTTTGTCTTT
TTTGTCTCTTTGTCTTTCTTTCTGGGGGAGGGAGTTCGAAATCATTTGCA
TGGGGGGGAGACATGGAAAGTCGAATCCCACGGCCAGCCGTTGCCTGCTC
ATTCTGGCCTCCAACTTCCAAATGGCCGACCACGCTCGTCAAGGACGCCT
GCCACGATGAAAGCCGCTTGTGCGAGGTGAACGTCGGCAAGCTTACGCTT
GCGCGTGTATTGTTGGTCGATGTTGTGTTGGTCCTTCTGTTTCTTCTTCC
ATTCTTTTTGGCTTGCTTTCTGGGGGGGGGAGAGGGGGTTCGACATCATT
TGTAGGGGGAGGAGATATGGAAAGTCGAGTACTACAGCCAGCCGTCGCCT
GCTGATTCTGGCCTCCAACTCTTAGTTGGCCGACCACGCTCATCAAGGAC
GCCTGCCACGATGAAATCCGCTTGTGCTTGGTGCACGCCAGCAAGCTTAC
GTTTGTGCGCGTATAATCGGTCGATGGTGTGCTGTTGTATTTTCTTTTTG
TTTTGCTTTCCAGGGGGGGCGGAAGGGCTCGACATCATTTGTAGCGGGGG
GGGGGGGCGACATGGAAAGTCGAGTCCCATCGTCAGCCGCCGCCTGCTCA
TTCTGGCGTCCAACTCCCAAATAGCCGACCACGCTCAGGGACGCCTGCTT
TAACGAAATGCGCTTGTGCGAGGTGCACGTCTGCGAGCTTGCGCTTGCGC
GTATACTGTCGGTCGATGTTGTGTTGGTCTATCTGTTTGTGTTGTTTTTC
TTTTCGGCATGCTTCATGGGCTCGACATCATTTGTCGATATGGAAAGTCG
AGTCCCATAGCCAGCCGTCGCCTGCTCATTCTGGCCTCCACCTTCCAAAT
GGCCGACCACGCTCAAGGAATCCTACCATAATGAAATGCGCTTGTGCGAA
GTGTACGTCTGCAAGCTTACGTTTGTGCGTTTTTGATCGGCCAATGGCGT
GCTGGTCTATTTTCTTTTGTTTTGCTTTCCGGGGGGGGGGGGGTAGGGTT
CGACATCATTTGTCGGGGGGGACGTGGAAATTCGAGTCCCATAGCCAGCC
GTCGCCGGTCATTCTGGCGTCCAACTTCCAAATGGCCGACCACGCTCAAG
AACACCTACTATGATGAGATGCGCTTGTGCGAGGTGCACGTCTGCGAGCT
TGCGCTTGCGCGTTTGTTGTCGGTCGATGTTGTGTTGGTCTATCTGTTTG
CCTTGTTTTCCTTTCTGGCTTGCTTTCTGGGGGGGGGAGGGGAAGGGTTC
GACATCATTTGCCGGCGGCGGGAGCCATGGAAAGTCGAGTCCCACAGCCA
GCCGTTGCGTGCTGATTCTGGCCTCCAACTTCCAAATGGACGACCACGCT
CGTCAAAGACGCCTACGACCATGAAACCCGCTTGTGCTTGGTGCACGTCT
GCAAGCTCACGCTCGCGTGTCTACCGTCGGTCGATGTTGTGCTGGTCTAT
CTGTTTGTCTTCTTTCTCGTTTCGGCTTGCTTTCCGGAGGTGAGGGTTCG
ACATCATTTGTATCATATGGGGGGGCAGACACGGAAAGTCGAGTCCCATA
GCCATCCATCGCCTGCTCTTTCTGGCTACCGAATTGGGCAACCACTCCCC
TGCAATATCGCCTTTTTCAATGAAATCCCGTTGTTTATATATGTATATAT
ATACTTCGTGTATTATAAAAACTGCTGTCGAAGCAAACGTTAGCTGCGTG
CTGCACGTTCACGTTCTTGTGCGTTGTATTTGTGTGTTGTGTATGTGCGC
TCGTGTTTTTCTTTTAAAAGGAGCTAAGGCGGCAGCTCGACGATCACCCC
ACGGAGGCGAAAGCAAGCTCCGCCACGGCTGCAGAAGACGCTTCTGCTAC
TGCTTCTGCTAATGCCACTGCTGCGGATGCTCGCCAGGGTCCCATAGGTC
CCACAGCCGTGTCCACCGGTCGGACAGGTAGTCAATCGGCACGGTTTCCA
AACGATCCGGCTAGGACACCTGCGGCGGCGACTGGTGCCGCCCCCGCCGC
TCCTGCTCCTACTCCTGCTGCTGCTCCTGGTCCTGCTGCTGATCCTGGTC
CTGCTCCCGCTTCTGCTACTGCTTCTGCCACTGCTTCTGCCACTGCTACA
GCTGCTGGTGATTCTACCACTACTGCTGCTGCTGCTGCTGCTGCTGCTGC
TACGCCGCCCGAGCGGCAACGATCGGAAAGGGGCGAGGCCCGGGGAGGAG
GCGTGGCGTCCGTAGCGGAGCTCGCTTCCGTCAAAGCGCAGGTATGGTAT
GGTATGATGTAATATTTACGTTGGTCGATGATTCGGTGTGGTTTCGGCAT
TTTAATGAATGACTGAAGACTGACTGTACTCTTGTATTGCTGTGGCGTAT
GGCAACTGTCGCAGGCTGCTCGCAATGCCGCATCATGGCTTCGGCAGGTT
AACGAATGAACGAAGACTGACTGTAACTTGTAAAGCTGTGACGTACGGAA
ACTGTCGAAGGCCGCTCGCCATGCTGCTTCATGGTTTGGCTACCACGTAT
GATATGTACCATGTATTTATGATCATTCCTGACATATCATATCATACATC
ACAAATGGTACATACAGTACTGGAAGGAGGTCCTCGGCGACCTTGTATTT
CCGGGCTGCTCACGTTTTTCTGTTTTTTCTTTTTGTGCATTGTACGGAAG
AGGCATGATTTAGTTCCCCGTCCGTTTCTGAGGCCCTCGCGTGACATGGA
TGGAGTGTGTGATATAAGAAATCAGGAGTGTTTTTTGCGGATTGTCTTCG
CCGTAGTCTACGCTACGTGGAGGCGATGATATGCATGTTCTGTTTGTCTA
TAGAGAAGTCTACCGTTGTGAATATTCTTGTGTGTGTGAGAGTCTACGTC
ACGTGGAGGTGATGGTATATGGCGTGTTCGGTTTGTATATACAGTAAGTA
TACCGTTATGAATATTCGTGTGTGTGTGAGTCTACGTCACGCGGAGGTGA
TGATATATGGCATGTTCGGTTTGTCTATACAGAAGTCTACCGTTGTGAAT
ATTCATGTGTGTGTGTGTATTTATTCGTTCTCTGGTCTACGCAAGAATCA
AGGCATTATATTACATGTTCGCGGAGCCCAGCCTTTTAGAACAAAAAAGC
TGTAGTTTGATTTTAGAGCCATTTCTTGCTTCGGTCAGGACTCTTTGGCG
GCGTGTTTCGCACCAAGAAAAAGTTGAATTGTGGTGCTTGAAAGCACCAC
TTTTGTGCACGCGTTGTTTTTGGTGAAATCGTACCACCTTCTGCAACCCC
CCCTCCCACCCACCCACCGTCCCCCGCCCTCGGCATGTATCTCAGGTGGA
AATGCTGATCCAACACAACGGAATGCTGCAACAACACACTTAGCCGTACC
ACTTGTACTTCTGTTGTTGTATTCAGACCCCTACGCTCTGCAACCCCCTC
CCTTCCCCCCCCACACACACGCCTGTGTGTGTATGCCAGGTGGAAACGCT
CAAACAACAGCTGGTGATGGCGGGAGTGCAGCAGTTGGCCCTCACGGGCG
TCCCCACCGGAGCAGCCCTGCTCAGCCCGCACAACGAGACCGCTCCCTTT
CGCCATCCAGGCCCTTTTCCTCCTCCCCCTCCTCCTCCTCCTCCCCCTGT
TCCTTGGGACGCGGTCGGCTCTTCCGCTGCTGCCGATGGCAGTAACTCGG
GGCAGCGAACATTCCGGGGCTCTAGCGGTAGTAGCGGCGGTAGCTGTAGC
GCGGTAGCAGAGAGAGCGATGGGTAGTGGTAGCACGGGGCTCTCACCACC
CGTAGGTGCTGCTGCGCGGAGGGGCGGCGATGGCTCCTGGAAGATGCACA
CGCATTGGGAGAGGCACCAGCAGCAGCACCAGCAGCAGCACCAGCAGGTG
CAAAGGAACACAAGGGTTACGAGGGACGTGGTCGACGGTGCACTGGAAGA
GCAACCGGGGGGTGGGGGCTCGGGAGAGCCGTCGTCGATGGTGGGTGACA
ACGCGATGATCAAGGGAGCGAGGGGTGCAAGGGTGGGGAGCGACAATACT
GCAAATTGTGGGAGGGGGGTACGGGCCGTGGGCGGTGACACTGGTGGCGC
TGCTGCTGCTGCTGCGGGGGGGGGAGAGGAGGGGAGCGGCGAGCGAGGCG
GGGGTGTGTGGAAGGAGGAGGTCCTCGGCGGAGGGGTCACGCAGGGTGCT
CCAGACGAGGAGGAAGAAGGGGTTGGCTGGTGGGCGCGGTCGGCCGACAA
GTTGCTGCTTCTTGCCCCGGGAGAGGAGGGCAAAGGCACGGCCGGAGGGG
AAGGTGAAGCGCGAGAAGCAGCCGCCTTCGGAAGCGGACGGATCGGGCGT
GCCAGTAGCACCAGTAGTCACTCGAGCAGCAGAGGCAGCAGCAGCAGAAG
AAGTAGTAGTAGTAGCGTTACTGCTACTACAACTGCAAACGGAACCGCCA
CGAAGGAAGCGATGCAGCGCATCGCAGCTGGAGCGGTTGCTGCTCGTGAC
GGTCGCGGCGGTGGTGACGGTGACTATGGTGATGGTGATGGTGATGGTGA
TGATGATGGGAAACATCGATCAAACCCAACCCCTCACGGCAGGGTTGTTC
CACTTGCCGAGCAACATACCTTTCCTCCTGTGGCTCCTCCTGTCAGAAGC
ATGAAACGTGCTGCTGGAATGATGGCTGCAACTGGGGGGCGGCATGCTTA
CCGGACCCAAGAGGCTGAAATGATACACCGCCGGTACCGGTACGGCAGCG
GCGCTGAGCGGATCGTTGGCGGCTCCAGCGCCGGTTCTGCCGTTGCCGCT
GCCGCTGCGGCTGCTGCTGCTGCTGCTGCTGCCATGAGCGGGGGGGGCGC
TACGCTTCTTCGAGATAGCTGGAGCTCCGTCGGCGCTCGGTCCTCGGAAA
GCGACCTAACGCAAGAGTTTGCTACCGCCGCAGCCGCACCGGTCTCGGGC
GCCACGTCTACGAGAAAT

Coding sequence (CDS) from alignment at P-littoralis_Contig828:110518..119335+

>mRNA_P-littoralis_Contig828.43.2 ID=mRNA_P-littoralis_Contig828.43.2|Name=mRNA_P-littoralis_Contig828.43.2|organism=Pylaiella littoralis U1_48|type=CDS|length=3234bp|location=Sequence derived from alignment at P-littoralis_Contig828:110518..119335+ (Pylaiella littoralis U1_48)
CCGCAAACAAAGCAGCGATTCTCGCCGGTCGGTCCTCCGGGGTGGAATCG
AGACTACCACGGCGGCGGTGATGACGGCTCCTCGCCTCCTTCGACGAAAG
GACGTGCGCCGCCATTTAGTGTAGGCGGTGGTGGAACTGGCGGCCGCAGC
TGCAGCGGCAGCGGCAGGGGCGGCAATGGTGGCGGCGGTGGATTTGGCAA
GGGAGAGGCAGAGGCACTGCTCGCGCGGCTAGCCGGCAAGGCCAAGCAAG
CGGCGGCTGCGGCACTGTCGGCATCGGCGGCATCGTCATCATCATCATCA
TCATTATTATCATCAGGAGCAGCAGCAGCAGCAACGCCTCATTCTACCGG
TACCCCGCCTTCGACGATGACGCCCCTGCTACCGCGTACCGGGACTCCCC
CGCAGCTGGGCAATAGCAACTGGACGAACGCTTACAATGTCGCCGCGCCG
CCGAAATCATCGGGACCGGTAACCGTAGTGCCGGGAGTGGGAAGCCGCCT
GACAACCTTGGATGACAGTTCTACTACTGCTCCCACCACTGCTACTGCTG
CTGCCAGCTCTGCTAGCTCTACTAGCACCGTTGCAGCATACACTCCCCAT
GGGACTGGAGGTTACCTCGGCGCCTCCACAGAGCGCGGCAACCAAATCAC
AGGGGAGGATTATAGCGGCGATAAAAAGGCTGCAGCTCCTGCTGCTGCTG
CAGTGGCCACCACGGCGGGAATGAGGGGGCCGGGCGTGGCTGCGGCAACA
GCGGCGACGGCGGCAGCAGCAGCTGCGGCAGCTGTCGTCGATAGAGGAGC
AGGGGACGCGGCAGCCCGGGGCGGCGGCGGCGGCGCGAGGCTGGCGGACC
TGTGCAAGGAAGACAAGGCGAAAGTGGCCCGCCTGATGCAGGACCTCGTT
AAGCTGAGGGCTGGCAAGGACGCCCAGAAGGCCCGGTTCGAGCGGCTCCG
GGCGCAGAACGAGTCGATAGTGAAGGAGATGGCGGCGCTCAAGCTCAGGT
TCGGGCAGAGCATGCAGCTTCTCAGGAAGTACCAGCGCATTCAGCAGCAG
CAGCAGCAGCAGCAGCAGCAGCAGATGCAGCAGGGGAGGGGGGGAGCGGC
CGGCGACGGAAAGGGCGCGGGCGGCGATGATTCATGCGGTTCCAGTGGTG
GCGGGAAGTCCCCGCAACAAGCGTCTCGAAGAACGGAGACAAGGGAGGAG
GAGGCGGCGGCGGCGGCGGCGGCAGGAAACGCCGGCCGTGCGGCGATGAC
AGAGGAGCTGCGAAGGGCGAGAGAACAGGCAGAAGAGCTAAGGCGGCAGC
TCGACGATCACCCCACGGAGGCGAAAGCAAGCTCCGCCACGGCTGCAGAA
GACGCTTCTGCTACTGCTTCTGCTAATGCCACTGCTGCGGATGCTCGCCA
GGGTCCCATAGGTCCCACAGCCGTGTCCACCGGTCGGACAGGTAGTCAAT
CGGCACGGTTTCCAAACGATCCGGCTAGGACACCTGCGGCGGCGACTGGT
GCCGCCCCCGCCGCTCCTGCTCCTACTCCTGCTGCTGCTCCTGGTCCTGC
TGCTGATCCTGGTCCTGCTCCCGCTTCTGCTACTGCTTCTGCCACTGCTT
CTGCCACTGCTACAGCTGCTGGTGATTCTACCACTACTGCTGCTGCTGCT
GCTGCTGCTGCTGCTACGCCGCCCGAGCGGCAACGATCGGAAAGGGGCGA
GGCCCGGGGAGGAGGCGTGGCGTCCGTAGCGGAGCTCGCTTCCGTCAAAG
CGCAGGTGGAAACGCTCAAACAACAGCTGGTGATGGCGGGAGTGCAGCAG
TTGGCCCTCACGGGCGTCCCCACCGGAGCAGCCCTGCTCAGCCCGCACAA
CGAGACCGCTCCCTTTCGCCATCCAGGCCCTTTTCCTCCTCCCCCTCCTC
CTCCTCCTCCCCCTGTTCCTTGGGACGCGGTCGGCTCTTCCGCTGCTGCC
GATGGCAGTAACTCGGGGCAGCGAACATTCCGGGGCTCTAGCGGTAGTAG
CGGCGGTAGCTGTAGCGCGGTAGCAGAGAGAGCGATGGGTAGTGGTAGCA
CGGGGCTCTCACCACCCGTAGGTGCTGCTGCGCGGAGGGGCGGCGATGGC
TCCTGGAAGATGCACACGCATTGGGAGAGGCACCAGCAGCAGCACCAGCA
GCAGCACCAGCAGGTGCAAAGGAACACAAGGGTTACGAGGGACGTGGTCG
ACGGTGCACTGGAAGAGCAACCGGGGGGTGGGGGCTCGGGAGAGCCGTCG
TCGATGGTGGGTGACAACGCGATGATCAAGGGAGCGAGGGGTGCAAGGGT
GGGGAGCGACAATACTGCAAATTGTGGGAGGGGGGTACGGGCCGTGGGCG
GTGACACTGGTGGCGCTGCTGCTGCTGCTGCGGGGGGGGGAGAGGAGGGG
AGCGGCGAGCGAGGCGGGGGTGTGTGGAAGGAGGAGGTCCTCGGCGGAGG
GGTCACGCAGGGTGCTCCAGACGAGGAGGAAGAAGGGGTTGGCTGGTGGG
CGCGGTCGGCCGACAAGTTGCTGCTTCTTGCCCCGGGAGAGGAGGGCAAA
GGCACGGCCGGAGGGGAAGGTGAAGCGCGAGAAGCAGCCGCCTTCGGAAG
CGGACGGATCGGGCGTGCCAGTAGCACCAGTAGTCACTCGAGCAGCAGAG
GCAGCAGCAGCAGAAGAAGTAGTAGTAGTAGCGTTACTGCTACTACAACT
GCAAACGGAACCGCCACGAAGGAAGCGATGCAGCGCATCGCAGCTGGAGC
GGTTGCTGCTCGTGACGGTCGCGGCGGTGGTGACGGTGACTATGGTGATG
GTGATGGTGATGGTGATGATGATGGGAAACATCGATCAAACCCAACCCCT
CACGGCAGGGTTGTTCCACTTGCCGAGCAACATACCTTTCCTCCTGTGGC
TCCTCCTGTCAGAAGCATGAAACGTGCTGCTGGAATGATGGCTGCAACTG
GGGGGCGGCATGCTTACCGGACCCAAGAGGCTGAAATGATACACCGCCGG
TACCGGTACGGCAGCGGCGCTGAGCGGATCGTTGGCGGCTCCAGCGCCGG
TTCTGCCGTTGCCGCTGCCGCTGCGGCTGCTGCTGCTGCTGCTGCTGCCA
TGAGCGGGGGGGGCGCTACGCTTCTTCGAGATAGCTGGAGCTCCGTCGGC
GCTCGGTCCTCGGAAAGCGACCTAACGCAAGAGTTTGCTACCGCCGCAGC
CGCACCGGTCTCGGGCGCCACGTCTACGAGAAAT