mRNA_P-littoralis_Contig827.26.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig827.26.1 vs. uniprot
Match: A0A6H5JRZ6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRZ6_9PHAE) HSP 1 Score: 235 bits (599), Expect = 6.880e-73 Identity = 127/165 (76.97%), Postives = 138/165 (83.64%), Query Frame = 3
Query: 654 QHRQFDGKIGIYPFT----EQRAAVRNSRNRAAGTMVTYSVEVNRETYAEKLINNVFPDIAAKFPASPIVYAQQDNAPGHRVTADPAIVAAAQQGGTRIELINQPPNSPDTNILDLGFFNSIQSLQDQSTPSTIDQLVAEVERAFWAQSSDTLDRVWTTLQSVLQ 1136
++R FDGKIGIYPFT QRAA RNSRNRAAGT+VT SVEVNR TY EKLINNV PDI AKFPA V+AQQD+APGHRV DP IVAAA QG RIELINQP NSPD N+LDLGFFNSIQSLQD++TP+TIDQLVAEVERAFWAQS +DRVWTTLQSV +
Sbjct: 15 RNRHFDGKIGIYPFTVQRAAQRAAQRNSRNRAAGTIVTRSVEVNRVTYKEKLINNVLPDIRAKFPAVSTVFAQQDSAPGHRVM-DPEIVAAAAQG-RRIELINQPANSPDMNVLDLGFFNSIQSLQDRTTPTTIDQLVAEVERAFWAQSPGAVDRVWTTLQSVFR 177
BLAST of mRNA_P-littoralis_Contig827.26.1 vs. uniprot
Match: A0A6H5JGY9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGY9_9PHAE) HSP 1 Score: 223 bits (569), Expect = 2.090e-66 Identity = 115/197 (58.38%), Postives = 144/197 (73.10%), Query Frame = 3
Query: 666 FDGKIGIYPFTEQRAAVRNSRNRAAGTMVTYSVEVNRETYAEKLINNVFPDIAAKFPASP--IVYAQQDNAPGHRVTADPAIVAAAQQGGTRIELINQPPNSPDTNILDLGFFNSIQSLQDQSTPSTIDQLVAEVERAFWAQSSDTLDRVWTTLQSVLQEIMLARGDNTFKLPHLHKLTAARRNEAIPRELPCSQEA 1250
F GK+GI+ FT QRAA RNSRNRAAGTM T VEV +E + K+++ VFP I A++P +Y Q DN P HR+ ADP +VAA G I LINQP NSPDTNILDLGFFN++QSLQD++TP T+D+ + EV+RAF QS T D+VW +LQ++LQ I+LA+G+NTFKLPHL K AA +IP+ELP S EA
Sbjct: 88 FTGKLGIFQFTVQRAAQRNSRNRAAGTMETKCVEVTKEVFKRKVVDEVFPAIKARWPGGRGRTIYIQLDNKPSHRINADPDVVAAGIADGWDIRLINQPSNSPDTNILDLGFFNAVQSLQDRNTPRTVDEFITEVKRAFEEQSPSTHDKVWVSLQAILQ-IILAKGNNTFKLPHLKKDNAANSGRSIPKELPLSAEA 283
BLAST of mRNA_P-littoralis_Contig827.26.1 vs. uniprot
Match: A0A6H5KWV2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWV2_9PHAE) HSP 1 Score: 226 bits (575), Expect = 2.240e-64 Identity = 113/149 (75.84%), Postives = 128/149 (85.91%), Query Frame = 3
Query: 660 RQFDGKIGIYPFTEQRAAVRNSRNRAAGTMVTYSVEVNRETYAEKLINNVFPDIAAKFPASPIVYAQQDNAPGHRVTADPAIVAAAQQGGTRIELINQPPNSPDTNILDLGFFNSIQSLQDQSTPSTIDQLVAEVERAFWAQSSDTLDR 1106
RQFDGKIGIYPFT QRAA RN RN AAGTMVT+SVEVNR Y +KL NNVFPDI AKFP+SPI++AQQ+NAPGHR DP +VAAA QG RIEL+NQPPNSPD NILDLGFFNSIQSLQD++TP+T+++LVAEVERA WAQ +TL R
Sbjct: 113 RQFDGKIGIYPFTVQRAAQRNGRNMAAGTMVTHSVEVNRTLY-KKLNNNVFPDIRAKFPSSPIIFAQQENAPGHRAMEDPDVVAAAGQGAGRIELVNQPPNSPDCNILDLGFFNSIQSLQDRTTPTTVEELVAEVERALWAQKPETLGR 260
BLAST of mRNA_P-littoralis_Contig827.26.1 vs. uniprot
Match: A0A6H5LD91_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LD91_9PHAE) HSP 1 Score: 180 bits (457), Expect = 1.620e-51 Identity = 92/143 (64.34%), Postives = 112/143 (78.32%), Query Frame = 1
Query: 37 MIDDLLRGSKNGVLQRGDFKTVGALYQQHPETVSRHWRLYQQKKEAGEQNPDLSNKRKGNSGRTGINIPVLVEKLAEIPLKNRTTQRSIAAALGIPKTTLVRNLKQLGLRACSRFLKPLLTDIAKEKRLDWAVRWVREVPGGA 465
M+ +LL+GS NG L GD K V A+Y+Q P+TVS++W+LY QKKEAGE++PDL NKRKGNSG+ G++I L E L +I LKNRTT RSIAAALGIPK+TL NL LGLR+CSRFLKPLL+D K +RL WA+RWVR G A
Sbjct: 1 MVAELLKGSNNGALSHGDVKRVVAIYKQTPKTVSKYWKLYNQKKEAGEEDPDLHNKRKGNSGQKGLDIATLKEALQDIHLKNRTTIRSIAAALGIPKSTLFDNLNNLGLRSCSRFLKPLLSDDWKAQRLAWALRWVRSSAGDA 143
BLAST of mRNA_P-littoralis_Contig827.26.1 vs. uniprot
Match: UPI001C261F0C (uncharacterized protein LOC121776676 n=1 Tax=Salvia splendens TaxID=180675 RepID=UPI001C261F0C) HSP 1 Score: 167 bits (422), Expect = 1.420e-45 Identity = 98/206 (47.57%), Postives = 130/206 (63.11%), Query Frame = 3
Query: 639 LRYWPQHRQFDGKIGIYPFTEQRAAVRNSRNRAAGTMVTYSVE-VNRETYAEKLINNVFPDIAAKFP--ASPIVYAQQDNAPGHRVTADPAIVAAAQQGGTRIELINQPPNSPDTNILDLGFFNSIQSLQDQSTPSTIDQLVAEVERAFWAQSSDTLDRVWTTLQSVLQEIMLARGDNTFKLPHLHKLTAARRNEAIPRELPCSQE 1247
LR+ FDGKIGI+PFT+Q A R S+NR+A T+ T +E + + E LIN + P I K+P AS +Y QQDNA H + DP AAA Q G ++L+ QPPNSPDTN+ DLG+F +IQSLQ Q+ T+D LV VE++F S+ TLD V+ +LQ + EIM ARG N++KLPH+ K A RR +P L +E
Sbjct: 12 LRFENGEVLFDGKIGIFPFTKQVPAKRKSKNRSARTIETKPIESITKAVTKEILINKIIPAIIEKWPEGASKCIYIQQDNAKPHILDDDPDFRAAANQNGFTMKLVQQPPNSPDTNVNDLGWFRAIQSLQLQTACKTLDDLVKAVEKSFEDLSAVTLDNVFLSLQGCMVEIMKARGHNSYKLPHMGK-EALRRVAQLPHNLEVPKE 216
BLAST of mRNA_P-littoralis_Contig827.26.1 vs. uniprot
Match: A0A6H5K9R2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9R2_9PHAE) HSP 1 Score: 160 bits (404), Expect = 6.600e-44 Identity = 79/129 (61.24%), Postives = 96/129 (74.42%), Query Frame = 3
Query: 864 DNAPGHRVTADPAIVAAAQQGGTRIELINQPPNSPDTNILDLGFFNSIQSLQDQSTPSTIDQLVAEVERAFWAQSSDTLDRVWTTLQSVLQEIMLARGDNTFKLPHLHKLTAARRNEAIPRELPCSQEA 1250
DN P H + ADP +VAA G I LINQP N P TNILDLGFFN+IQSLQD++TP T+D+ + EV+RAF QS TLD+VW +LQ++LQEI+LA+GDNT KLPHL K AA +IP+ELP S EA
Sbjct: 4 DNKPSHCINADPDVVAAGTADGWDIRLINQPSNIPHTNILDLGFFNAIQSLQDRTTPRTVDEFIIEVKRAFEEQSPSTLDKVWESLQAILQEIILAKGDNTIKLPHLKKDKAANSGRSIPKELPLSAEA 132
BLAST of mRNA_P-littoralis_Contig827.26.1 vs. uniprot
Match: A0A6A4YZW8_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A4YZW8_9STRA) HSP 1 Score: 167 bits (422), Expect = 9.840e-44 Identity = 95/197 (48.22%), Postives = 120/197 (60.91%), Query Frame = 3
Query: 666 FDGKIGIYPFTEQRAAVRNSRNRAAGTMVTYSVEVNRETYAEKLINNVFPDIAAKFPAS-PIVYAQQDNAPGHRVTADPAIVAAAQQGGTRIELINQPPNSPDTNILDLGFFNSIQSLQDQSTPSTIDQLVAEVERAFWAQSSDTLDRVWTTLQSVLQEIMLARGDNTFKLPHLHKLTAARRNEAIPRELPCSQEAW 1253
FDGK+GI+PF E AA R S R AGT+ T SV V + Y + L++ FP I KFP + + Q DNA H VT DPA+VAA+ G RI QP NSPD NILDLGFFNSIQ+LQ + T+D+L+ VE AF S +LD V+ TLQSV++ I+ G N +KL HL K RR E + L CS + +
Sbjct: 211 FDGKLGIWPFVEVVAAQRRSNRREAGTLETKSVTVTKAIYKKMLVDQTFPAIFEKFPRNVQRIVVQHDNATPHAVTTDPAVVAASASDGRRIVFGEQPANSPDLNILDLGFFNSIQALQQKMPAYTVDELIRNVENAFTNVPSVSLDNVFYTLQSVMECILETGGSNKYKLKHLGKEAKRRRGE-LEESLTCSADTY 406
BLAST of mRNA_P-littoralis_Contig827.26.1 vs. uniprot
Match: UPI002009A106 (uncharacterized protein LOC125220207 n=1 Tax=Salvia hispanica TaxID=49212 RepID=UPI002009A106) HSP 1 Score: 162 bits (409), Expect = 1.670e-43 Identity = 92/199 (46.23%), Postives = 124/199 (62.31%), Query Frame = 3
Query: 666 FDGKIGIYPFTEQRAAVRNSRNRAAGTMVTYSV-EVNRETYAEKLINNVFPDIAAKFPA--SPIVYAQQDNAPGHRVTADPAIVAAAQQGGTRIELINQPPNSPDTNILDLGFFNSIQSLQDQSTPSTIDQLVAEVERAFWAQSSDTLDRVWTTLQSVLQEIMLARGDNTFKLPHLHKLTAARRNEAIPRELPCSQEAW 1253
FDGKIGI+PFTEQ A RN++NR AGT+ T + + +E + +IN V P I K+P S + QQDNA H DP AAA Q G I+L+ QPPNSPDT++ DLG+F +IQSLQ Q+ +TID LV VE++F TLD V+ +LQS + EIM +G N +K+PH+ K + RR+ +P L E +
Sbjct: 21 FDGKIGIFPFTEQVPAKRNNKNRCAGTLETKPIASITKEVTKQCIINKVIPTIMEKWPEGKSKFITIQQDNAKPHIANHDPDFRAAATQNGFNIQLVQQPPNSPDTDVNDLGWFRAIQSLQLQTACNTIDDLVKAVEKSFHDLCPVTLDNVFLSLQSCMLEIMRLKGQNCYKIPHMGK-ASLRRSGQLPENLQVPLELF 218
BLAST of mRNA_P-littoralis_Contig827.26.1 vs. uniprot
Match: A0A485KM04_9STRA (Aste57867_9103 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KM04_9STRA) HSP 1 Score: 161 bits (407), Expect = 5.830e-43 Identity = 90/176 (51.14%), Postives = 115/176 (65.34%), Query Frame = 3
Query: 666 FDGKIGIYPFTEQRAAVRNSRNRAAGTMVTYSVEVNRETYAEKLINNVFPDIAAKFPAS-PIVYAQQDNAPGHRVTADPAIVAAAQQGGTRIELINQPPNSPDTNILDLGFFNSIQSLQDQSTPSTIDQLVAEVERAFWAQSSDTLDRVWTTLQSVLQEIMLARGDNTFKLPHLHK 1190
F+GKIG++PF EQR AVR SRNR AGTMVT V VN TY + ++N V P I A FP S V QQDNA HR D ++ + G T + + QPPNSPD N+LDLGFF SIQ+LQ + T+D ++A AF + S+TL V+ TLQ+V++ ++ GDN FKLPHLHK
Sbjct: 84 FNGKIGMWPFVEQRPAVRISRNRPAGTMVTSLVNVNANTYRDYVLNKVVPAIKANFPTSNKRVILQQDNATPHRSIDDASLARVSTDGWTFV-VRRQPPNSPDLNVLDLGFFASIQTLQYKMVSRTVDDVIASTLAAFESLDSETLWNVFLTLQAVMRLVLEHSGDNHFKLPHLHK 258
BLAST of mRNA_P-littoralis_Contig827.26.1 vs. uniprot
Match: A0A6P6X993_COFAR (uncharacterized protein LOC113741020 n=2 Tax=Coffea TaxID=13442 RepID=A0A6P6X993_COFAR) HSP 1 Score: 162 bits (410), Expect = 7.170e-43 Identity = 89/202 (44.06%), Postives = 128/202 (63.37%), Query Frame = 3
Query: 654 QHRQFDGKIGIYPFTEQRAAVRNSRNRAAGTMVTYSV-EVNRETYAEKLINNVFPDIAAKFPASPIV---YAQQDNAPGHRVTADPAIVAAAQQGGTRIELINQPPNSPDTNILDLGFFNSIQSLQDQSTPSTIDQLVAEVERAFWAQSSDTLDRVWTTLQSVLQEIMLARGDNTFKLPHLHKLTAARRNEAIPRELPCSQE 1247
+++ FDGKIGI+PF + A RNS+NR AGT+ T + V +E Y LI+NV P I AK+P S ++ + QQDNA H D + AA + G I L QPPNSPD N+LDLG+F +IQSLQ Q P++ID+L++ VE++F SS++L+ V+ TLQ + E+M G N +K+PH+ K R +P ++ C +E
Sbjct: 115 RNKHFDGKIGIFPFAFKEPAKRNSKNRVAGTLETKPILSVTKEVYRRCLIDNVLPAIRAKWPQSDVISPIFIQQDNAKPHIDPMDVEFIEAATREGFDIRLSFQPPNSPDMNVLDLGYFRAIQSLQHQEAPNSIDELISAVEKSFDELSSESLNNVFLTLQLCMLEVMKNCGGNNYKVPHIGKQRLIRDGN-LPLQIGCDKE 315 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig827.26.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig827.26.1 >prot_P-littoralis_Contig827.26.1 ID=prot_P-littoralis_Contig827.26.1|Name=mRNA_P-littoralis_Contig827.26.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=239bp MIDDLLRGSKNGVLQRGDFKTVGALYQQHPETVSRHWRLYQQKKEAGEQNback to top mRNA from alignment at P-littoralis_Contig827:97127..98379+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig827.26.1 ID=mRNA_P-littoralis_Contig827.26.1|Name=mRNA_P-littoralis_Contig827.26.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=1253bp|location=Sequence derived from alignment at P-littoralis_Contig827:97127..98379+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig827:97127..98379+ >mRNA_P-littoralis_Contig827.26.1 ID=mRNA_P-littoralis_Contig827.26.1|Name=mRNA_P-littoralis_Contig827.26.1|organism=Pylaiella littoralis U1_48|type=CDS|length=717bp|location=Sequence derived from alignment at P-littoralis_Contig827:97127..98379+ (Pylaiella littoralis U1_48)back to top |