prot_P-littoralis_Contig825.2.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig825.2.1
Unique Nameprot_P-littoralis_Contig825.2.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length125
Homology
BLAST of mRNA_P-littoralis_Contig825.2.1 vs. uniprot
Match: A0A6H5JMP6_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMP6_9PHAE)

HSP 1 Score: 130 bits (328), Expect = 8.360e-33
Identity = 64/123 (52.03%), Postives = 83/123 (67.48%), Query Frame = 0
Query:    3 WEYKGRTQAGVEVDWISEDQILKAKSFTPLQLDGFIALWHLYHPNITPSEEANHDP----RAATALSRKAALQLYPIGTHVQKDFGSGLTLNGQVFDFKDRYWRVRYTDNNWEEVTRTELKRL 121
            WEY+G+  +G   DW+SED +L+  SFTPLQLDGF+ALWHLYHP     ++AN  P    +    LSR  AL+L+PI   ++K+   G+ L GQVFDF   YWRV Y+D NWEE+ R EL+RL
Sbjct:  758 WEYRGKLGSGAVSDWLSEDVMLR--SFTPLQLDGFVALWHLYHP-----QQANDLPPVSVKPRAPLSRAEALKLFPIDFTLRKELDGGVNLQGQVFDFLQPYWRVGYSDQNWEELARRELERL 873          
BLAST of mRNA_P-littoralis_Contig825.2.1 vs. uniprot
Match: A0A6H5KEH2_9PHAE (RNA-directed DNA polymerase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEH2_9PHAE)

HSP 1 Score: 130 bits (327), Expect = 1.190e-32
Identity = 62/121 (51.24%), Postives = 81/121 (66.94%), Query Frame = 0
Query:    3 WEYKGRTQAGVEVDWISEDQILKAKSFTPLQLDGFIALWHLYHPNITPSEEANHDPRAATALSRKAALQLYPIGTHVQKDFGSGLTLNGQVFDFKDRYWRVRYTDNNWEEVTRTELKRLLR 123
            WEYKG++  GV  DW+ E+ +   +SFTPLQLD F+ALWHLY P +  +  A    +  T LSR  AL ++PIG   QK+   G+ L GQV+D+   YWRVRYTD NWEE++R EL+RL R
Sbjct: 1764 WEYKGKSGNGVVSDWLPEETM--RRSFTPLQLDCFVALWHLYFPQLA-NASAPDSVKPRTPLSRAQALHVFPIGFTFQKELAGGILLQGQVYDYVSPYWRVRYTDGNWEELSRRELERLAR 1881          
BLAST of mRNA_P-littoralis_Contig825.2.1 vs. uniprot
Match: A0A6H5KNP4_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNP4_9PHAE)

HSP 1 Score: 95.5 bits (236), Expect = 2.200e-20
Identity = 55/127 (43.31%), Postives = 74/127 (58.27%), Query Frame = 0
Query:    2 SWEYKGRTQAGVEVDWISEDQILKAKSFTPLQLDGFIALWHLYHPNITPSEEANHDPRAAT-----ALSRKAALQLYPIGTHVQK---DFGSGLTLN-GQVFDFKDRYWRVRYTDNNWEEVTRTELK 119
            +WEY+G+ Q G    W++ED +    SF+PLQLD F ALW  YH     S+ A   P A T       +R+AALQ +P+ T V K   D    + L+ G+V DF D YWRV ++D +WEE TR EL+
Sbjct: 1565 AWEYRGKYQDGTTSSWLTEDTV--KDSFSPLQLDVFHALWEDYHG----SDVAPRPPGAPTRGEREVATREAALQEFPLNTEVAKELRDKDDNIILSRGKVCDFYDPYWRVEFSDGDWEEFTRRELR 1685          
BLAST of mRNA_P-littoralis_Contig825.2.1 vs. uniprot
Match: A0A6H5K3V4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3V4_9PHAE)

HSP 1 Score: 92.0 bits (227), Expect = 3.640e-19
Identity = 48/123 (39.02%), Postives = 73/123 (59.35%), Query Frame = 0
Query:    2 SWEYKGRTQAGVEVDWISEDQILKAKSFTPLQLDGFIALWHLYH-PNITPSEEANHDPRAATALSRKAALQLYPIGTHVQKDF----GSGLTLNGQVFDFKDRYWRVRYTDNNWEEVTRTELK 119
            +WEYKG+ Q G   DW++ED +    SF+PLQL  F AL   YH  ++ P              +R+AAL+ +P+ T V ++     G+ +   G+V DF D YWRV+++D++WEE+TR EL+
Sbjct: 2110 AWEYKGKYQEGTPSDWLTEDTV--KDSFSPLQLGIFHALCEDYHGTDVAPRPPGALSRGEHEVATREAALKEFPLDTEVARELLDSDGNVVVSRGKVCDFYDPYWRVKFSDDDWEELTRRELR 2230          
BLAST of mRNA_P-littoralis_Contig825.2.1 vs. uniprot
Match: A0A6H5JAJ3_9PHAE (RT_RNaseH_2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAJ3_9PHAE)

HSP 1 Score: 84.7 bits (208), Expect = 1.320e-16
Identity = 46/122 (37.70%), Postives = 67/122 (54.92%), Query Frame = 0
Query:    2 SWEYKGRTQAGVEVDWISEDQILKAKSFTPLQLDGFIALWHLYHPNITPSEEANHDPRAATAL-SRKAALQLYPIGTHVQKDF----GSGLTLNGQVFDFKDRYWRVRYTDNNWEEVTRTEL 118
            +WEY+   Q G    W +E+++    SF+PLQLD F AL+ L++        A    R    + SR+ ALQL+P+GT V ++F    G         FD  D YWRV Y D +WEE+T++E+
Sbjct: 1813 TWEYQDHYQDGALSPWPTEEEV--GDSFSPLQLDVFHALYELFYGENGAPRPAGPPTRGEREVASREQALQLFPVGTQVGREFADSDGHLKVFKATAFDCCDPYWRVEYPDGDWEELTKSEM 1932          
BLAST of mRNA_P-littoralis_Contig825.2.1 vs. uniprot
Match: A0A6H5KBF4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBF4_9PHAE)

HSP 1 Score: 71.6 bits (174), Expect = 4.930e-12
Identity = 33/59 (55.93%), Postives = 41/59 (69.49%), Query Frame = 0
Query:   64 LSRKAALQLYPIGTHVQKDFGSGLTLNGQVFDFKDRYWRVRYTDNNWEEVTRTELKRLL 122
            L R  ++Q+   G   QKDFG G  L GQVF  +DRYWRVRY++ NWEE+TR EL+R L
Sbjct: 1068 LQRGLSVQVKMQGFTSQKDFGGGQKLQGQVFGHRDRYWRVRYSNQNWEELTRQELERCL 1126          
BLAST of mRNA_P-littoralis_Contig825.2.1 vs. uniprot
Match: A0A836CCZ7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CCZ7_9STRA)

HSP 1 Score: 59.7 bits (143), Expect = 6.440e-8
Identity = 29/75 (38.67%), Postives = 45/75 (60.00%), Query Frame = 0
Query:   50 PSEEANHDPRAATALSRKAALQLYPIGTHVQKDF----GSGLT-LNGQVFDFKDRYWRVRYTDNNWEEVTRTELK 119
            P +     P+    + R++ALQLYPIGT + ++     G  +T + G V +F   YWR+RY D  WE++TRT++K
Sbjct:   59 PRQRDRPTPKEDAGMRRESALQLYPIGTALVREHRTVVGGPITYVWGAVKNFVSPYWRIRYEDGEWEQMTRTQVK 133          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig825.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
A0A6H5JMP6_9PHAE8.360e-3352.03Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5KEH2_9PHAE1.190e-3251.24RNA-directed DNA polymerase n=1 Tax=Ectocarpus sp.... [more]
A0A6H5KNP4_9PHAE2.200e-2043.31Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5K3V4_9PHAE3.640e-1939.02Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JAJ3_9PHAE1.320e-1637.70RT_RNaseH_2 domain-containing protein n=1 Tax=Ecto... [more]
A0A6H5KBF4_9PHAE4.930e-1255.93Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A836CCZ7_9STRA6.440e-838.67Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig825contigP-littoralis_Contig825:6241..6615 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig825.2.1mRNA_P-littoralis_Contig825.2.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig825 5995..6648 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig825.2.1 ID=prot_P-littoralis_Contig825.2.1|Name=mRNA_P-littoralis_Contig825.2.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=125bp
MSWEYKGRTQAGVEVDWISEDQILKAKSFTPLQLDGFIALWHLYHPNITP
SEEANHDPRAATALSRKAALQLYPIGTHVQKDFGSGLTLNGQVFDFKDRY
WRVRYTDNNWEEVTRTELKRLLRA*
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