mRNA_P-littoralis_Contig824.13.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig824.13.1 vs. uniprot
Match: A0A6H5J952_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J952_9PHAE) HSP 1 Score: 104 bits (260), Expect = 3.520e-25 Identity = 48/81 (59.26%), Postives = 55/81 (67.90%), Query Frame = 2
Query: 68 LLAEIFPPEGGGNGEEDMRKYFASWSPYRIRKVHVEHIGKNEIYRPGSELDGIDGTRVMYRFAGANIPSHQAATTTDGLQD 310
L F + G GEE MRKYFA WSPYR+R+VHVE IGK E+YRP S L G +GTR MY FAGAN P +TTT+G D
Sbjct: 201 FLRSFFREKAGSEGEEGMRKYFAKWSPYRMRRVHVEFIGKKEMYRPNSVLAGTEGTRDMYHFAGANTPKWDGSTTTEGRVD 281
BLAST of mRNA_P-littoralis_Contig824.13.1 vs. uniprot
Match: A0A6H5JQG9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQG9_9PHAE) HSP 1 Score: 105 bits (262), Expect = 4.150e-25 Identity = 46/81 (56.79%), Postives = 57/81 (70.37%), Query Frame = 2
Query: 68 LLAEIFPPEGGGNGEEDMRKYFASWSPYRIRKVHVEHIGKNEIYRPGSELDGIDGTRVMYRFAGANIPSHQAATTTDGLQD 310
L F + G GEE MR+YFA WSPYR+R+VHVE IGK E+YRP S L+G++GTR MY FAGAN P +T+T G +D
Sbjct: 217 FLRSFFREKAGSEGEEGMRRYFAKWSPYRMRRVHVEIIGKKEVYRPNSILEGVEGTREMYHFAGANTPKWDGSTSTKGRED 297
BLAST of mRNA_P-littoralis_Contig824.13.1 vs. uniprot
Match: A0A6H5JFY7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFY7_9PHAE) HSP 1 Score: 103 bits (258), Expect = 4.260e-25 Identity = 46/81 (56.79%), Postives = 56/81 (69.14%), Query Frame = 2
Query: 68 LLAEIFPPEGGGNGEEDMRKYFASWSPYRIRKVHVEHIGKNEIYRPGSELDGIDGTRVMYRFAGANIPSHQAATTTDGLQD 310
L F + G GEE MR+YFA WSPY +R+VHVE IGK EIYRP S L+G++GTR MY FAGAN P +T+T G +D
Sbjct: 143 FLRSFFREKAGSEGEEGMRRYFAKWSPYPMRRVHVEFIGKKEIYRPNSILEGVEGTREMYHFAGANTPEWDGSTSTKGRED 223
BLAST of mRNA_P-littoralis_Contig824.13.1 vs. uniprot
Match: A0A6H5KI10_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KI10_9PHAE) HSP 1 Score: 107 bits (268), Expect = 5.160e-25 Identity = 47/80 (58.75%), Postives = 57/80 (71.25%), Query Frame = 2
Query: 68 LLAEIFPPEGGGNGEEDMRKYFASWSPYRIRKVHVEHIGKNEIYRPGSELDGIDGTRVMYRFAGANIPSHQAATTTDGLQ 307
L F + G GEE MR+YFA WSPYR+R+VH E IGK EIYRP S L+G++GTR MY FAGAN P +TTT+GL+
Sbjct: 695 FLRSFFEEKAGSEGEEGMRRYFAKWSPYRMRRVHFEFIGKKEIYRPNSILEGVEGTREMYHFAGANTPKWDGSTTTEGLE 774
BLAST of mRNA_P-littoralis_Contig824.13.1 vs. uniprot
Match: A0A6H5L2L6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2L6_9PHAE) HSP 1 Score: 107 bits (266), Expect = 9.400e-25 Identity = 52/86 (60.47%), Postives = 60/86 (69.77%), Query Frame = 2
Query: 68 LLAEIFPPEGGGNGEEDMRKYFASWSPYRIRKVHVEHIGKNEIYRPGSELDGIDGTRVMYRFAGANIPSHQAATTTDGLQ-DIELV 322
L F + G G E MRKYFA WSPYR+R+VHVE IGK EIYRP S L GI+GTR MY FAGAN P +TTT+GL+ D +LV
Sbjct: 489 FLRSFFREKAGSEGGEGMRKYFAKWSPYRMRRVHVECIGKKEIYRPNSVLAGIEGTRDMYHFAGANTPKWDGSTTTEGLENDCKLV 574
BLAST of mRNA_P-littoralis_Contig824.13.1 vs. uniprot
Match: A0A6H5L293_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L293_9PHAE) HSP 1 Score: 104 bits (259), Expect = 8.320e-24 Identity = 46/81 (56.79%), Postives = 56/81 (69.14%), Query Frame = 2
Query: 68 LLAEIFPPEGGGNGEEDMRKYFASWSPYRIRKVHVEHIGKNEIYRPGSELDGIDGTRVMYRFAGANIPSHQAATTTDGLQD 310
L F + G GEE MR+YFA WSPYR+R+VHVE I K EIYRP S L+G++GTR MY FAGAN P +T+T G +D
Sbjct: 523 FLRSFFREKAGSEGEEGMRRYFAKWSPYRMRRVHVEFISKKEIYRPNSILEGVEGTREMYHFAGANTPKWDGSTSTKGRED 603
BLAST of mRNA_P-littoralis_Contig824.13.1 vs. uniprot
Match: A0A6H5JLE6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLE6_9PHAE) HSP 1 Score: 100 bits (248), Expect = 1.800e-22 Identity = 46/77 (59.74%), Postives = 54/77 (70.13%), Query Frame = 2
Query: 80 IFPPEGGGNGEEDMRKYFASWSPYRIRKVHVEHIGKNEIYRPGSELDGIDGTRVMYRFAGANIPSHQAATTTDGLQD 310
F + G GEE MRKYFA WSPYR+R+VHVE IG EI RP S L G++GT MY FAGAN P +TTT+GL+D
Sbjct: 232 FFREKAGSEGEEGMRKYFAKWSPYRMRRVHVEFIGNKEISRPNSVLAGLEGTLDMYHFAGANNPKWDGSTTTEGLED 308
BLAST of mRNA_P-littoralis_Contig824.13.1 vs. uniprot
Match: A0A6H5L7F4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7F4_9PHAE) HSP 1 Score: 97.8 bits (242), Expect = 3.330e-22 Identity = 43/81 (53.09%), Postives = 54/81 (66.67%), Query Frame = 2
Query: 68 LLAEIFPPEGGGNGEEDMRKYFASWSPYRIRKVHVEHIGKNEIYRPGSELDGIDGTRVMYRFAGANIPSHQAATTTDGLQD 310
L F + G GEE MR++FA WSPYR+R+VHVE +GK EIYRP S L+G++GTR MY AG N P +T+T G D
Sbjct: 249 FLRSFFREKAGSEGEEGMRRFFARWSPYRMRRVHVEFMGKKEIYRPNSILEGVEGTREMYHLAGPNTPEWDGSTSTKGRGD 329
BLAST of mRNA_P-littoralis_Contig824.13.1 vs. uniprot
Match: A0A6H5JBS1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBS1_9PHAE) HSP 1 Score: 97.8 bits (242), Expect = 6.960e-22 Identity = 45/81 (55.56%), Postives = 53/81 (65.43%), Query Frame = 2
Query: 68 LLAEIFPPEGGGNGEEDMRKYFASWSPYRIRKVHVEHIGKNEIYRPGSELDGIDGTRVMYRFAGANIPSHQAATTTDGLQD 310
L F + G GEE MRKYFA W+PYR+R+VHVE G EIYR S L GI+GTR M FAGAN P +TTT+G +D
Sbjct: 165 FLRSFFREKAGSEGEEGMRKYFAKWAPYRMRRVHVEFFGMKEIYRTNSVLAGIEGTRDMCHFAGANTPKWDGSTTTEGRED 245
BLAST of mRNA_P-littoralis_Contig824.13.1 vs. uniprot
Match: A0A6H5KTJ4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTJ4_9PHAE) HSP 1 Score: 98.2 bits (243), Expect = 1.140e-21 Identity = 43/68 (63.24%), Postives = 51/68 (75.00%), Query Frame = 2
Query: 107 GEEDMRKYFASWSPYRIRKVHVEHIGKNEIYRPGSELDGIDGTRVMYRFAGANIPSHQAATTTDGLQD 310
GEE RKYFA WSPYR+R+VHVE IGK EIYRP S L+G++GTR MY AGAN P +T+T G +D
Sbjct: 310 GEESTRKYFAKWSPYRMRRVHVEFIGKKEIYRPNSILEGVEGTREMYHCAGANTPKRDGSTSTKGRED 377 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig824.13.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 24
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig824.13.1 >prot_P-littoralis_Contig824.13.1 ID=prot_P-littoralis_Contig824.13.1|Name=mRNA_P-littoralis_Contig824.13.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=72bp MKNHERFGKRIVGANKVVDFLRKFFPQKGGATVKRTCGSTSRHGLRTASAback to top mRNA from alignment at P-littoralis_Contig824:62954..63276+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig824.13.1 ID=mRNA_P-littoralis_Contig824.13.1|Name=mRNA_P-littoralis_Contig824.13.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=323bp|location=Sequence derived from alignment at P-littoralis_Contig824:62954..63276+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig824:62954..63276+ >mRNA_P-littoralis_Contig824.13.1 ID=mRNA_P-littoralis_Contig824.13.1|Name=mRNA_P-littoralis_Contig824.13.1|organism=Pylaiella littoralis U1_48|type=CDS|length=216bp|location=Sequence derived from alignment at P-littoralis_Contig824:62954..63276+ (Pylaiella littoralis U1_48)back to top |