prot_P-littoralis_Contig824.2.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_P-littoralis_Contig824.2.1
Unique Name	prot_P-littoralis_Contig824.2.1
Type	polypeptide
Organism	Pylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length	249

Homology

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BLAST of mRNA_P-littoralis_Contig824.2.1 vs. uniprot
Match: D8LI55_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LI55_ECTSI)

HSP 1 Score: 145 bits (367), Expect = 1.730e-39
Identity = 110/257 (42.80%), Postives = 134/257 (52.14%), Query Frame = 0

Query:    1 MGDVIEPCADGGFDIPTTP----VAIPVSRLTSQSS---NDHFTHKPRRIRIQLEDDDDGDVGNXXXXXXXXXXXXXPGRVPVGASADQLLAGTK--IAQCTNNVARATDVEEAAGGSENIVSTPALNRPEYRIYKIETPNEDPMLEILVYLSSESKVAPVSTTSTAINATKTNGTPSSDKNCCRGSCPSVSVSSDGRSVVVDQNPPTEGSGGGSGGVGLREGRFSLKLPQRVVPGTAISFFWEGDLTVRATLADVE 248
            MGDVIE CADGGFDIP T      A P+ R+ +QSS   +D    KPRR+              XXX           GR P  AS ++ L   K  +   +N  A A+   E     E     PA +RPEYRIYKIE P EDP +EI+   S  +  AP+ST               + K    G CPSV +SSDGR  VV++NP  +   GG  GV   +GRF L+LPQRVVP TA+SFF +G LTVRATLA  E
Sbjct:    1 MGDVIEACADGGFDIPATTDTRDTAGPLPRVKTQSSAAMDDRVEPKPRRVXXXXXXXXXXXXXXXXXENGPGRNIL--GRTPPTASVEEGLTDEKAPLHNVSNAAANASRNHEQ--DDEKATDAPATSRPEYRIYKIEMPGEDPTVEIVCSFSDGNLAAPIST---------------ARKKRLSG-CPSVKISSDGRKFVVERNPAADAGDGGGDGV-AEKGRFRLQLPQRVVPTTAMSFFRKGQLTVRATLATSE 236

The following BLAST results are available for this feature:

BLAST of mRNA_P-littoralis_Contig824.2.1 vs. uniprot

BLAST of mRNA_P-littoralis_Contig824.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
D8LI55_ECTSI	1.730e-39	42.80	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 51..65
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 35..50
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 24..78
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 186..202
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 186..210

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-littoralis_Contig824	contig	P-littoralis_Contig824:18640..24013 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Pylaiella littoralis U1_48 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_P-littoralis_Contig824.2.1	mRNA_P-littoralis_Contig824.2.1	Pylaiella littoralis U1_48	mRNA	P-littoralis_Contig824 18640..24013 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_P-littoralis_Contig824.2.1 ID=prot_P-littoralis_Contig824.2.1|Name=mRNA_P-littoralis_Contig824.2.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=249bp
MGDVIEPCADGGFDIPTTPVAIPVSRLTSQSSNDHFTHKPRRIRIQLEDD
DDGDVGNDDDREEGNDGDRDPGRVPVGASADQLLAGTKIAQCTNNVARAT
DVEEAAGGSENIVSTPALNRPEYRIYKIETPNEDPMLEILVYLSSESKVA
PVSTTSTAINATKTNGTPSSDKNCCRGSCPSVSVSSDGRSVVVDQNPPTE
GSGGGSGGVGLREGRFSLKLPQRVVPGTAISFFWEGDLTVRATLADVE*