mRNA_P-littoralis_Contig822.8.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig822.8.1
Unique NamemRNA_P-littoralis_Contig822.8.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig822.8.1 vs. uniprot
Match: D7FLF6_ECTSI (Putative far-red impaired response protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLF6_ECTSI)

HSP 1 Score: 610 bits (1572), Expect = 6.410e-210
Identity = 342/562 (60.85%), Postives = 397/562 (70.64%), Query Frame = 1
Query:  148 MYRCIAESIRPQKLGPRGARKVRNMSRR----LQMSCGQRPETPWNSWQSWNGGSRR*SGSWTRMTS*RPLCGPRPNKFFSRKRMAALSSRTTHA*QTGTTTSYVSTWA*IRKTRHRFSRKGSSATNQPKRSISLTNSFSRS-AGATLR*SLLIPT*P*KPPLRVCFPTRRT----CSAHGTPARTSRKKCMSILKKEICTSLLWRWTRALLATSTKAFDEVWKDVENLVKGTDCEEYILGFLYERRKHWARCFHPTVMTLDMTSSQRVEGTFSVLKKDRILRRNSTFRQLRAKCDRVAQDLLLASTMQATKHTSLGKGFVESDVKKSMEKVTTEYAKVGASKRTRPEIWAEMMASSAYDSSIVSEGQASMQSLQNLVTRSASELNDATN------GSGDVCCQVPEKVFQEDEAPDTTMFGTTSLHSFCRLVERVEIDCIVKVLYKHKADRKVGHLVVVGPGGFQLCTCLQLLRRGLQCRHVVAALVTQLKHADEFQGQSIHPRWRSSVAPWSIEKVPLGTFDGDADGSYDGGFTGEWEQPGDFEDLQGDNTQLRLVCLER 1788
            MYRCIAESI+PQKLGPRGARKVRNMSR+    L  S G   E           G+             R +    P +    +    +  +      T    + +  +  +              +N+   +    N F     G   +  +       K  +R  FP   T    CS H    +  +KKC+SILK E C  LL RWTRA LATS +AFD VW DVE+LVKGTDCEEYIL FLYERRKHWARCFHPTVMTLDMTSSQRVEGTFSVLKK R+LRRNSTFRQ+RAKC+++A +L LASTMQATK TSLGKG+VE+DVKKSMEKV T YA+VGASK  + EIWAEM+ASSAYD+SIV+EG+ SMQ LQNL TRS ++ ND+TN      G+GDVCCQVP++VF+EDEAPDTTMFGTTSLHSFCRLVE VEIDCIVKVLYKHK DRKVGHLV+VGPGGFQLCTCLQLLRRGLQCRHV+AALVT+LK +DEF+GQSIHPRWRSSV PWSI +V LGTFDGD DGSYDGGFTG+WE  GDFEDLQGDNT + ++ + R
Sbjct:    1 MYRCIAESIKPQKLGPRGARKVRNMSRKVTGELWASSGDALELV----AELERGNETVKWELDAENILRSIMWASPEQILLARTYGGVVIQDNTC-LTNRYNNKLCLFVGVDSENKTQVFAQGFFSNESTEAFDFANKFFLDICGGHPKVIITDSDAAMKESIRGVFPPPHTTHLLCSWHI--CKNIKKKCLSILKSEKCADLLRRWTRASLATSIEAFDGVWTDVEDLVKGTDCEEYILKFLYERRKHWARCFHPTVMTLDMTSSQRVEGTFSVLKKGRVLRRNSTFRQVRAKCEQIAGELRLASTMQATKQTSLGKGYVENDVKKSMEKVMTAYAEVGASKYAKEEIWAEMLASSAYDTSIVTEGRDSMQFLQNLATRSVNDSNDSTNVSGHDHGAGDVCCQVPKEVFEEDEAPDTTMFGTTSLHSFCRLVECVEIDCIVKVLYKHKPDRKVGHLVIVGPGGFQLCTCLQLLRRGLQCRHVLAALVTRLKRSDEFKGQSIHPRWRSSVEPWSIAEVKLGTFDGDGDGSYDGGFTGDWEPSGDFEDLQGDNTSVSVLSVLR 555          
BLAST of mRNA_P-littoralis_Contig822.8.1 vs. uniprot
Match: A0A6H5K454_9PHAE (SWIM-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K454_9PHAE)

HSP 1 Score: 354 bits (909), Expect = 4.960e-104
Identity = 253/669 (37.82%), Postives = 347/669 (51.87%), Query Frame = 1
Query:    1 IELQHVRECTMEACAAVEQQQNLISLDVLEKEWADSIREMTRGGIKPHLMYRCIAESIRPQKLGPRGARKVRNMSRRLQMSCGQRPETPWNSWQSWNGGSRR*SGSWTRMTS*RPLC-----GPRPNKFFS------RKRMAALSSRTTHA*QTGTTTSYVSTWA*IRKTRHRF-----------SRKGSSA----TNQPKRSISLTNSFSRSAGATLR*SLLIPT*P*KPPLRVCF---------------PTRRTCSAHGTPARTSRKKCMSILKKEICTSLLWRWTRALLATSTKAFDEVWKDVENLVKGTDCEEYILGFLYERRKHWARCFHPTVMTLDMTSSQRVEGTFSVLKKDRILRRNSTFRQLRAKCDRVAQDLLLASTMQ-------------------------------------------------------ATKHTSLGKGFVESDVKKSMEKVTTEYAKVGASKRTRPEIWAEMMASSAYDSSIVSEGQASMQSLQNLVTRSASELNDATNGSGDVCCQVPEKVFQEDEAPDTTMFGTTSLHSFCRLVERVEI---DCIVKVLYKHKADRKVGHLVVVGPGGFQLCTCLQLLRRGLQCRHVVAALVTQLKHADEFQGQSIHPRWR-SSVAPWSIEKVPLGTFDGDADGSYDGGF 1707
            + L+H  +C M+  A   +  +++ L+ LEK WAD I+ MT GG++P  MYRCI E+I+P+KLG RG RKVRNMS ++                     SR   G W   T    L      GP   K+ S      R  M A   +   A   G      +T       R+ F           ++ G  A    +N+   S    N F        +   L+PT P   P +V                 P  +   +    ++  ++KC      E+   ++ R+T A  ATS KAF+ +W +++ +V+GT CEEYI G+L+++RKHWARC HPT MTL MT+SQRVEG+FSV+K    +R+NSTF  +R + + VA+DL LAS M                                                        +TK  SL    +E DVKK++E V  EY K GAS   R EI AEM+AS +YD++++ +G+ S + L++L  + ++      +G+GDVCCQVP  VF   + PDT+MFGTT L SF RLV  V+I   D +VKV+YK    RKVGHLVV+GP GFQLC CLQL+RRGLQCRHV+AALVT+L  A EF+G+ IHPRWR +SV  WS++KV LG+FD +   SY G F
Sbjct:  726 VNLEHHADCEMQHVAKKHKDDSVVPLEELEK-WADDIKSMTLGGVRPFTMYRCIGENIKPRKLGTRGVRKVRNMSDKV---------------------SR---GRWASKTDALELVADLERGPATVKWESDANHVLRSIMWASPEQIMLARTYGGIVIQDNTCL---INRYDFKLCLFVGVDSENKTGIFAQGLLSNEQISSFDFANRFLLEIRGGTQSHHLLPTPPTPHPPQVIITDADAAMTSSVAELMPHTKHLYSSWHISKNLKRKCGG----EVFADVIRRYTAASFATSMKAFERIWNNLKEVVEGTPCEEYINGYLFDQRKHWARCCHPTTMTLGMTASQRVEGSFSVIKNGGAVRKNSTFGAVRKRVETVAEDLALASRMWVSRGVKARVALYHIFILIHCIGMYGLLRGVSHTVEPASFTITSITAVRCLSPCRLSTKAGSLRFAHMEDDVKKAIEPVMKEYEKAGASTYARREIMAEMVASDSYDTTVLVKGRESKRFLEDLAAQPSNN-----DGNGDVCCQVPADVFDGKKHPDTSMFGTTCLQSFYRLVAHVDIYMGDAVVKVVYKR---RKVGHLVVIGPDGFQLCACLQLMRRGLQCRHVLAALVTELDRASEFKGEFIHPRWRPNSVDTWSLDKVELGSFDEEGRTSYKGRF 1354          
BLAST of mRNA_P-littoralis_Contig822.8.1 vs. uniprot
Match: A0A6H5JEJ0_9PHAE (SWIM-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEJ0_9PHAE)

HSP 1 Score: 269 bits (687), Expect = 6.570e-77
Identity = 159/357 (44.54%), Postives = 217/357 (60.78%), Query Frame = 1
Query:  682 RKKCMSILKKEICTSLLWRWTRAL-LATSTKAFDEVWKDVENLVKGTDCEEYILGFLYERRKHWARCFHPTVMTLDMTSSQRVEGTFSVLKKDRILRRNSTFRQLRAKCDRVAQDLLLASTMQATKHTSLGKGFVESDVKKSMEKVTTEYAKVGASKRTRPEIWAEMMASSAYDSSIVSEGQASMQSLQNLVTRSASELNDATNGSGDVCCQVPEKVFQEDEAPDTTMFGTTSLHSFCRLVERVEIDCIVKVLYKHKADR---KVGHLVVVGPGGFQLCTCLQLLRRGLQCRHVVAALVTQLKHADEFQGQSIHPRWRSSVAPWSIEKVPLGTFDGDADGSYDGGFTGEWEQPGDFE 1740
            RK C   L K+   S  +R   A   A + +A  + W ++   VKG+DCEEY+ G L    +HW+RCF PT MTL+MT++QRVEG FSVLKK RI+ R  +  +++A+ ++      LAS + +TK  SLG+  ++  V K+ E V  +   VGAS     E+ AEM AS+AYD++++++ QA   +  + +   A E    T G    C  VP + F+    PD TM+GTTSL SF  LV  V I+ +V+V YK+       KV H+VVVGP GFQLCTCL+L+R GL C HV AALVT+L  A +F G SIHPRWR SV  WS+  V LGTFDG    ++ GGFT ++   GDF+
Sbjct:  237 RKNCARALGKKA--SRFYRLLHAAAFAATEEACSDAWSEIFRHVKGSDCEEYVTGHLLRHHRHWSRCFFPTTMTLNMTATQRVEGMFSVLKKGRIVNRRCSLVRVKAELEKRIAGFTLASNLLSTKAPSLGRQHIDDHVLKTAEHVFRQLTDVGASTYAVNEMVAEMRASAAYDTAVLTDKQADDAACHDCLDGLA-ERGGRTEG---YCADVPAEAFEGSHDPDITMYGTTSLPSFAELVRNVGIEAVVQVQYKYPRTARRGKVSHIVVVGPKGFQLCTCLKLMRCGLPCSHVFAALVTRLDRASDFIGASIHPRWRKSVVEWSLRNVALGTFDGHE--TFTGGFTEDFGG-GDFD 584          
BLAST of mRNA_P-littoralis_Contig822.8.1 vs. uniprot
Match: A0A6H5JJS4_9PHAE (SWIM-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJS4_9PHAE)

HSP 1 Score: 178 bits (451), Expect = 3.110e-43
Identity = 108/234 (46.15%), Postives = 143/234 (61.11%), Query Frame = 1
Query: 1048 ATKHTSLGKGFVESDVKKSMEKVTTEYAKVGASKRTRPEIWAEMMASSAYDSSIVSEGQASMQSLQNLVTRSASELNDATNGSGDVCCQVPEKVFQEDEAPDTTMFGTTSLHSFCRLVERVEIDCIVKVLYKHKADR---KVGHLVVVGPGGFQLCTCLQLLRRGLQCRHVVAALVTQLKHADEFQGQSIHPRWRSSVAPWSIEKVPLGTFDGDADGSYDGGFTGEWEQPGDFE 1740
            +TK  SLG+  ++  V K+ E V  +   VGAS     E+ AEM AS+AYD++++++ QA   +  + +   A E    T G    C  VP + F+    PD TM+GTTSL SF  LV  V I+ +V+V YK+       KV H+VVVGP GFQLCTCL+L+R GL C HV AALVT+L  A +F G SIHPRWR SV  WS+  V LGTFDG    ++ GGFT ++   GDF+
Sbjct:  704 STKAPSLGRQHIDDHVLKTAEHVFRQLTDVGASTYAVNEMVAEMRASAAYDTAVLTDKQADDAACHDCLDGLA-ERGGRTEG---YCADVPAEAFEGSHDPDITMYGTTSLPSFAELVRNVGIEAVVQVQYKYPRTARRGKVSHIVVVGPKGFQLCTCLKLMRCGLPCSHVFAALVTRLDRASDFIGASIHPRWRKSVVEWSLRNVALGTFDGHE--TFTGGFTEDFGG-GDFD 930          
BLAST of mRNA_P-littoralis_Contig822.8.1 vs. uniprot
Match: A0A6H5K6K4_9PHAE (SWIM-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6K4_9PHAE)

HSP 1 Score: 143 bits (360), Expect = 4.160e-36
Identity = 80/168 (47.62%), Postives = 109/168 (64.88%), Query Frame = 1
Query: 1162 EIWAEMMASSAYDSSIVSEGQASMQSLQNLVTRSASELNDATNGSGDVCCQVPEKVFQEDEAPDTTMFGTTSLHSFCRLVERVEIDCIVKVLYKHKADRKVGHLVVVGPGGFQLCTCLQLLRRGLQCRHVVAALVTQLKHADEFQGQSIHPRWRS-SVAPWSIEKVPL 1662
            E  +EM+    Y   ++ EG+ SM+ L++L    ++      +G+GDVCC+VP + F   + P+T  FG   L SF RLV  V+ID  VKV YK+++   V HLVV+GP  FQ+CTCLQ++RRG QCRHV+AALV   + + EF G SIHPRWR  S  PWS+E+V L
Sbjct:    6 EFMSEMLTFLYYCPEVLVEGKGSMRFLEDLTAHPSNR-----DGNGDVCCEVPREAFDGKDNPETK-FGAICLQSFFRLVANVKIDAGVKVSYKYRSPT-VSHLVVLGPDRFQMCTCLQVMRRGWQCRHVLAALVRSNRDS-EFAGASIHPRWRPRSAEPWSLERVAL 165          
BLAST of mRNA_P-littoralis_Contig822.8.1 vs. uniprot
Match: A0A6H5KWM8_9PHAE (MULE domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWM8_9PHAE)

HSP 1 Score: 127 bits (320), Expect = 4.710e-27
Identity = 112/367 (30.52%), Postives = 171/367 (46.59%), Query Frame = 1
Query:  682 RKKCMSILK-KEICTSLLWRWTRALLATSTKAFDEVWKDVENLVKGTDCEEYILGFLYERRKHWARCFHPTVMTLDMTSSQRVEGTFSVLKKDRILRRNSTFRQLRAKCDRVAQDLLLASTMQATKHTSLGKGFVESDVKKSMEKVTTEYAKVGASKRTRPEIWAEMMASSAYDSSIVSEGQASMQS------------LQNLVTRSASELNDATNGSGDVCCQVPEKVFQEDEAPDTTMFGTTSLHSFCRLVERVEIDCIVKVLYKHKADRKVGHLVVVGPGGFQLCTCLQLLRRGLQCRH---VVAALVTQLKHADE------FQGQSIHPRWRSS----VAPWSIEKVPLGTFDGDA-DGSYDG 1701
            RK C S     +  T +L  + RA  A + +AF      ++ LV G  CE+Y+   +  + K WA C+ PTV+TL M ++QR EG F V K+  + ++ S    L  +   V++ + + +   AT   + G  F +  V++  + V  E    GAS+  +     ++  S +YD  +V+ G                  ++NL  +    LN       D    +      ++ A D TM+  TSL +F  LV    I+ +  V YK+ A+    HLV  GP  F L +CLQLLRRGL CRH   V+A L+ +   +DE      F G  +H RWR S    V PWS+  V   +  G+  DG + G
Sbjct:  313 RKNCSSSFPDNDAKTDMLRTFRRAAYAATPEAFATQAARLKTLVAGKKCEDYMTDLITNKTK-WAFCWRPTVVTLGMVATQRTEGLFGVAKRSGVEKKLSLC-ALWDRLQHVSKMIAIETARLATPLITPGVAFRDKHVEEFFQPVKQELLACGASQYCQ-----KVDGSESYDVELVTSGNVDEDGQPLPLHDDDFVQIRNLRLK----LNILQVAPPDT--DLERDSLADEPAEDNTMWACTSLLAFLELVAGFPIELVAAVRYKYSANNP-SHLVAFGPHNFHLRSCLQLLRRGLPCRHYFAVLANLIGRTGESDEWSFTHAFDGSCVHNRWRQSDDGKVLPWSVSFVLSSSGHGEGWDGHHQG 665          
BLAST of mRNA_P-littoralis_Contig822.8.1 vs. uniprot
Match: A0A6H5JY17_9PHAE (SWIM-type domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JY17_9PHAE)

HSP 1 Score: 124 bits (311), Expect = 3.960e-26
Identity = 115/382 (30.10%), Postives = 171/382 (44.76%), Query Frame = 1
Query:  685 KKCMSILK-KEICTSLLWRWTRALLATSTKAFDEVWKDVENLVKGTDCEEYILGFLYERRKHWARCFHPTVMTLDMTSSQRVEGTFSVLKKDRILRRNSTFRQLRAKCDRVAQDLLLASTMQATKHTSLGKGFVESDVKKSMEKVTTEYAKVGASKRTRPEIWAEMMASSAYDSSIVSEGQASMQS----LQNLVTRSASE-------LNDATNGSGDV---CCQVPEKVFQEDEAPDTTMFGTTSLHSFCRLVERVEIDCIVKVLYKHKADRKVGHLVVVGPGGFQLCTCLQLLRRGLQCRHVVAALVT---------QLKHADEFQGQSIHPRWRSSV----APWSIEKVPLGTFDGDA-DGSYDGGFTGEWEQPGDFED 1743
            K C S    KE    +L  +  A  A + +AF     D+E +VKG  CEEY+   + ++ K WA    PT++T+ M ++QR EG F V K+  + ++ S    L  K   + Q + +  +  AT+       F    ++     +  E  +VGAS+  + E  AE+  S +YD  ++  G          L   V R   E       L +      D+   C + PE     +   D++++  TSL +   L+  + +     V YK    R  GH+VV GP GF LC+CL+LLR GL CRH  A LV           L H   F G S+H RWR S+     PW++ +V   T  GD  DG  +G     W    D +D
Sbjct:   78 KNCSSSFPDKEERAKMLRLFRSAAYAATPEAFARYRVDLEKIVKGKKCEEYMDALIQDKTK-WAFSCRPTLLTMGMVATQRTEGMFGVAKRSGVHKKLSLC-GLWEKLQLMYQKMDVEYSRVATRGVGAELPFQTKHLQGIFAPIQEELKRVGASQYCQVEARAEVGGSQSYDVEVICAGATDDDGRPDPLGEGVLRRKLEAVRFDLSLFEEAKPDTDLEKDCMRGPEA----ESTEDSSVWARTSLEALLDLIGELPVHVAAAVRYKLTPARP-GHVVVFGPNGFHLCSCLKLLRHGLVCRHYFAVLVRFLGCRFKGILLDH--RFDGNSLHARWRQSLDGNDEPWTVSRVLKETGHGDGWDGCEEGADDNFWGPTFDDDD 450          
BLAST of mRNA_P-littoralis_Contig822.8.1 vs. uniprot
Match: A0A6H5KBY4_9PHAE (SWIM-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBY4_9PHAE)

HSP 1 Score: 120 bits (302), Expect = 1.540e-24
Identity = 98/308 (31.82%), Postives = 146/308 (47.40%), Query Frame = 1
Query:  796 VENLVKGTDCEEYILGFLYERRKHWARCFHPTVMTLDMTSSQRVEGTFSVLKKDRILRRNSTFRQLRAKCDRVAQDLLLASTMQATKHTSLGKGFVESDVKKSMEKVTTEYAKVGASKRTRPEIWAEMMASSAYDSSIVSEGQAS-----MQSLQNLVTRSAS---ELNDATNGSGDVCCQVPEKVFQEDEAPDTTMFGTTSLHSFCRLVERVEIDCIVKVLYKHKADRKVGHLVVVGPGGFQLCTCLQLLRRGLQCRHVVAALVTQLKHADE---------FQGQSIHPRWR----SSVAPWSIEKV 1656
            +E LV G  CE YI   +  + K WA C  PTV+TL M ++QR EG F V K   + ++ S    L  +  R+++ + + +   AT     G  F +  V+     V  E    GAS+  +     ++  + +YD+ +VS G+       +   +N + +  S   +LN       D   +  +     + A D TM+  TSL +F  L+E + I+ +V V YK  A+R   HLVV GP  F LC+CLQLLRR L CRH  A LV  +    E         F G  +H RWR     + + W+I  V
Sbjct:  737 LEQLVAGKKCEGYIADLIKNKTK-WAFCCRPTVLTLGMVATQRTEGLFGVAKSSGVEKKLSLC-ALWDRLQRLSKMIAIETARLATPPLGAGVAFGDIHVENFFRPVKQELLACGASQYCQ-----QVDEAQSYDAELVSSGRVEENGDPLPFHENDLAKIRSLRLKLNVLQVAPPDTDLEGDQ--LAGEAAVDNTMWARTSLSAFLDLIEDIPIELVVAVRYKWTANRP-SHLVVFGPHNFHLCSCLQLLRRRLPCRHYFAVLVNLIGRTGESDEMAFTHTFNGACVHNRWRRREDGNDSSWTISSV 1034          
BLAST of mRNA_P-littoralis_Contig822.8.1 vs. uniprot
Match: A0A6H5JYU5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYU5_9PHAE)

HSP 1 Score: 116 bits (290), Expect = 5.950e-24
Identity = 112/353 (31.73%), Postives = 156/353 (44.19%), Query Frame = 1
Query:  727 LLWRWTRALLATSTKAFDEVWKDVENLVKGTDCEEYILGFLYERRKHWARCFHPTVMTLDMTSSQRVEGTFSVLKKDRILRRNSTFRQLRAKCDRVAQDLLLASTMQATKHTSLGKGFVESDVKKSMEKVTTEYAKVGASKRTRPEIWAEMMASSAYDSSIVSEGQASMQSLQNLVTRSASELNDATNGSGDVCCQVPEKVFQEDEAP-DTTMFGTTSLHSFCRLVERVEIDCIVKVLYKHKADRKVGHLVVVGPGGFQLCTCLQLLRRGLQCRHVVAALV---------TQLKHADEFQGQSIHPRWRSSV----APWSIEKVPLGTFDGDADGSYDGGFTGEWEQPGDFED 1743
            +L  +  A  A + KAF     D+E  VKG  C+EY+   L E+ K WA    PT +TL M ++QR EG F V KK  I  +N +   L  +   V Q + +     A+    L   F      K +E+   E   +G S+    E+   + A+ A    +  EG    Q L+     +  + N       D   ++  K+  E E+  D T++   SL +   LV RV +     V YK    R   H+VV GPGGF LC+CL+LLR GL CR   + L            L H  EF G S+H RWR S     APW+  +V  G   GD     D G    +  P D +D
Sbjct:    1 MLRLFRNAEYAATPKAFATYRADLERTVKGKKCDEYMRDLLEEKTK-WAFSCRPTALTLGMVATQRTEGMFGVAKKSGI-HKNLSLCALWDRLQHVYQTMDIEHGRVASPAVKLELAFPT----KHLEEAKDE---LGGSQSCDVEVVC-VRAADAEGHPVPLEGGVLRQQLE----AAHFDFNVCEEAPPDTDLEIDCKLGPEAESTGDNTVWARASLEALLDLVSRVLVHLAAAVRYKLTPSRP-SHVVVFGPGGFYLCSCLKLLRHGLPCRLYFSVLARFIGGKYGGVLLNH--EFDGNSVHTRWRQSPDGSDAPWTASRVLEGAGHGDGWDGCDHGQDDNFWGPTDDDD 336          
BLAST of mRNA_P-littoralis_Contig822.8.1 vs. uniprot
Match: A0A6H5KQW8_9PHAE (SWIM-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQW8_9PHAE)

HSP 1 Score: 116 bits (291), Expect = 1.990e-23
Identity = 88/278 (31.65%), Postives = 133/278 (47.84%), Query Frame = 1
Query:  856 RRKHWARCFHPTVMTLDMTSSQRVEGTFSVLKKDRILRRNSTFRQLRAKCDRVAQDLLLASTMQAT-----KHTSLGKGFVESDVKKSMEKVTTEYAKVGASKRTRPEIWAEMMASSAYDSSIVSEGQASMQSLQNLVTRSASELNDATNGSGDVCCQVPEKVFQEDEAPDTTMFGTTSLHSFCRLVERVEIDCIVKVLYKHKADRKVGHLVVVGPGGFQLCTCLQLLRRGLQCRHVVAALVTQL-KHADEFQGQSIHPRWRSSVAPWSIEKVPLGTF 1671
            +R+ WA CF+P  +TL +TS+QRVE   +VLK   ++ R S+  +L A  + V   L L S          KH +   G V   + K  E +     ++GAS        +E +A+  Y +  +++G  ++ +L   ++R    +  AT         +P     +D   D TM+  TSL +FC L+   +I  + K+ ++        HLVV GPGGF LC+CL LL  G  CRH +A L     K   EF    +HPRWR    PWS+  +   T 
Sbjct:  204 KREKWAFCFNPGALTLGITSTQRVERMNAVLKH--LISRYSSLSRLDAALETVEAKLHLESERGNNDKVLMKHPTWSSG-VLGTMLKFFEPIGQALKQLGASNYALDVTKSEAVAAMTYATERLAQGSDAVTTLLPTLSRGEGGVRFATAPDSR---DLPN--IDDDGGDDATMYARTSLPAFCALLHGQDITEVYKISFRSGGADGRAHLVVTGPGGFYLCSCLHLLHTGRFCRHFLAVLADFFAKGGWEFDPACLHPRWREDERPWSMASIARKTI 473          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig822.8.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FLF6_ECTSI6.410e-21060.85Putative far-red impaired response protein n=1 Tax... [more]
A0A6H5K454_9PHAE4.960e-10437.82SWIM-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5JEJ0_9PHAE6.570e-7744.54SWIM-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5JJS4_9PHAE3.110e-4346.15SWIM-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5K6K4_9PHAE4.160e-3647.62SWIM-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5KWM8_9PHAE4.710e-2730.52MULE domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A6H5JY17_9PHAE3.960e-2630.10SWIM-type domain-containing protein n=3 Tax=Ectoca... [more]
A0A6H5KBY4_9PHAE1.540e-2431.82SWIM-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5JYU5_9PHAE5.950e-2431.73Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KQW8_9PHAE1.990e-2331.65SWIM-type domain-containing protein n=1 Tax=Ectoca... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig822contigP-littoralis_Contig822:40142..44307 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FLF6
PFAMsMULE
Model size1963
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons9
Evalue7.36e-206
EggNOG OGs2CMGX@1|root,2QQB8@2759|Eukaryota
Cds size1200
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig822.8.1prot_P-littoralis_Contig822.8.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig822 42310..44237 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791680.1587124-UTR-P-littoralis_Contig822:40141..403511680791680.1587124-UTR-P-littoralis_Contig822:40141..40351Pylaiella littoralis U1_48UTRP-littoralis_Contig822 40142..40351 +
1680791680.1735036-UTR-P-littoralis_Contig822:40589..408091680791680.1735036-UTR-P-littoralis_Contig822:40589..40809Pylaiella littoralis U1_48UTRP-littoralis_Contig822 40590..40809 +
1680791680.183122-UTR-P-littoralis_Contig822:41707..418551680791680.183122-UTR-P-littoralis_Contig822:41707..41855Pylaiella littoralis U1_48UTRP-littoralis_Contig822 41708..41855 +
1680791680.1947563-UTR-P-littoralis_Contig822:42194..423091680791680.1947563-UTR-P-littoralis_Contig822:42194..42309Pylaiella littoralis U1_48UTRP-littoralis_Contig822 42195..42309 +
1680791680.2777073-UTR-P-littoralis_Contig822:44237..443071680791680.2777073-UTR-P-littoralis_Contig822:44237..44307Pylaiella littoralis U1_48UTRP-littoralis_Contig822 44238..44307 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791680.2073832-CDS-P-littoralis_Contig822:42309..423871680791680.2073832-CDS-P-littoralis_Contig822:42309..42387Pylaiella littoralis U1_48CDSP-littoralis_Contig822 42310..42387 +
1680791680.2189152-CDS-P-littoralis_Contig822:42551..426341680791680.2189152-CDS-P-littoralis_Contig822:42551..42634Pylaiella littoralis U1_48CDSP-littoralis_Contig822 42552..42634 +
1680791680.2288318-CDS-P-littoralis_Contig822:42808..429971680791680.2288318-CDS-P-littoralis_Contig822:42808..42997Pylaiella littoralis U1_48CDSP-littoralis_Contig822 42809..42997 +
1680791680.238673-CDS-P-littoralis_Contig822:43208..433131680791680.238673-CDS-P-littoralis_Contig822:43208..43313Pylaiella littoralis U1_48CDSP-littoralis_Contig822 43209..43313 +
1680791680.251989-CDS-P-littoralis_Contig822:43326..433391680791680.251989-CDS-P-littoralis_Contig822:43326..43339Pylaiella littoralis U1_48CDSP-littoralis_Contig822 43327..43339 +
1680791680.2675164-CDS-P-littoralis_Contig822:43505..442371680791680.2675164-CDS-P-littoralis_Contig822:43505..44237Pylaiella littoralis U1_48CDSP-littoralis_Contig822 43506..44237 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig822.8.1

>prot_P-littoralis_Contig822.8.1 ID=prot_P-littoralis_Contig822.8.1|Name=mRNA_P-littoralis_Contig822.8.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=400bp
MSILKKEICTSLLWRWTRALLATSTKAFDEVWKDVENLVKGTDCEEYILG
FLYERRKHWARCFHPTVMTLDMTSSQRVEGTFSVLKKDRILRRNSTFRQL
RAKCDRVAQDLLLASTMQATKHTSLGKGFVESDVKKSMEKVTTEYAKVGA
SKRTRPEIWAEMMASSAYDSSIVSEGQASMQSLQNLVTRSASELNDATNG
SGDVCCQVPEKVFQEDEAPDTTMFGTTSLHSFCRLVERVEIDCIVKVLYK
HKADRKVGHLVVVGPGGFQLCTCLQLLRRGLQCRHVVAALVTQLKHADEF
QGQSIHPRWRSSVAPWSIEKVPLGTFDGDADGSYDGGFTGEWEQPGDFED
LQGDNTQLRLVCLERESDCQPHRVVQSGYSHLHRQHDPRLHHCRSVHVR*
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mRNA from alignment at P-littoralis_Contig822:40142..44307+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig822.8.1 ID=mRNA_P-littoralis_Contig822.8.1|Name=mRNA_P-littoralis_Contig822.8.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=4166bp|location=Sequence derived from alignment at P-littoralis_Contig822:40142..44307+ (Pylaiella littoralis U1_48)
ATCGAGCTTCAGCACGTACGAGAGTGCACGATGGAAGCTTGCGCGGCGGT TGAGCAACAGCAAAATTTGATCTCGTTGGATGTGCTCGAAAAGGAGTGGG CTGATAGCATCCGCGAGATGACTCGGGGGGGCATCAAACCTCACCTGATG TACCGCTGCATTGCAGAGTCTATTAGGCCCCAAAAGCTCGGACCAAGGGG TGCACGCAAGGTAAAGATATGTCGGGGTCTGGCCTCATGCACTGGGGCGG ACCTTTGTACAAACACCATGCTGAATTTGGACCGTTTCAATCAAGAAACG CCGCCAAACGAACGAGCGTTTGATGGAGGCACACAACAGATGCTTTCCAC GTTTGGCCCTTGGTCCTCCTGTCAGACCGACACGGACAGCCCTCGGAGCA ACCCCATCCTCTTTGCTTTTGTGCGCGTGTGTCCCGCGTGTGCCCCAGGT GCGAAACATGTCGCGAAGGTTACAGATGAGCTGTGGGCAGCGTCCGGAGA CGCCATGGAACTCGTGGCAGAGTTGGAACGGGGGATCGAGACGGTAAAGT GGCAGCTGGACGCGGATGACATCTTGACGTCCATTATGTGGGCCTCGCCC GAACAAATTCTTCTCGCGAAAACGTATGGCGGCATTGTCATCCAGGACAA CACATGCCTGACAAACAGGTATTTCAATGCTTCCATAGTACGCCGTCGTT TAATGTTTGGGAAATAGTTTTGAGGGCAGTAAAGGCTCCAAGTACTAGGA AGGGGGTAATGAGCCGCGGACTCAACACCTTGCAGTGGTCGACCTGCGAT GGCGCGACGTATATAGCCTGATATAGCGCGACGTAATGTTTACAAGTATG TAACTTGCGTGCGTTATATCTGGTACAGCCTTGACATCTCTTTTCATAAT AATATTGTATACAAACCTATCAAACCAATGCTGCTAACGAAACAGCTTCT AAAGAAGAAAGAGCCTAGAGGGGTCAGCGATGTTGCAGAAGTTATAAACA CACAACACCAGCACCAACTGCAGCAGCAACAGCGGCGGCGGCAACCAGCC AGATAGCAGCAGCATCCCAGATAGACAACGTCGATGCTGGATGCTGTATT ATTATTCTGGTCATCTGAATATCTTATCAACTTTCATCCTTTGTAGACGC GATTTCGGAGACCCGACCCAGGGGCTGCATCGTTATGTATCTGTCCCCGT ACAAAATAACAAATGCCCGTGTAGCACGACCATCCCTTGTTGCAGCACAG CCAAGCCGGCATGAGGAATAGTGCCCTATTTTTCTTCCCTCTAAAAGGTG ATCAGCTAGTCAACCGATGCTCTGTTGATGTTTTTCTACTCGAAGGACAT TTTTGATGGTCGTAGTCAAGTTTCGAAGTTTCGAAGGCCACTTGCGACCC GATACCTAGATTTTGTTTCCTTTTCTCAGAAGATTCTTCGAAGGCAAGAA AAACAGCCTCGCCATAAGAGAGCTCGGCTTATTAATTTCATGACATGCCG TGGCGCGAGCAAGAGGGTTTAACCCTGCACACATTTACCTTTTATCCTGT GCTAATCGTTCCACAGGTACGACTACAAGTTATGTTTCTACGTGGGCGTG AATTCGGAAAACAAGACACAGGTTTTCGCGCAAAGGTTCTTCAGCAACGA ATCAACCGAAGCGTTCGATTTCGCTAACAAATTCTTTCTCGAGATCTGCG GGGGCCACCCTAAGGTGGGTGCTGCGTTCGTAGTTGAGGTGCTCGTCGCA GATCTTATATAGCACTCCAAACTCAACGGGAACTCTCCAAAAAACACCTG CGCCAACCAGCACACGGAAGGGTCCGAGGGTTCCAGGCGGTGGGGTGTGT TGATCGCGTCGCTTAATCAGGTTGTCCTTTGAAAGGTTCGTGTCCCCAAG TTTCCCCCGTTAGAGGCACCTAGTGCCAAGGGGGTTAGTATTGGGTGGTA GCTTCATGTGTACGGTGAACTGACTATTGGCTGTTGTTGTCATCTCTCTC TCTTTGACGATCTCCGTCCCCATCGCCTCTTCCCACAACCGCGCCCTCCA TAGGTAATCATTACTGATTCCGACATAGCCATGAAAGCCTCCATTGAGGG TGTGTTTCCCCACACGACGCACTTGCTCTGCTCATGGCACACCTGCAAGA ACATCAAGGAAGAAGTGTATGTCGATATTGAAAAAGGAAATATGTACGAG TTTGCTCTGGCGGTGGACGAGGGCATTGTTGGCGACATCAACTAAGGTGG GAATGCCCAAAGGCCTTCGAAATGCGTAGTTCCGACGTTCGCCACCTGCA TGTGTGCTTTTGTAGGTTGCTCCAGTGTACACGTGCTCGTTCGCCGTTGC TTGCACCACTTTAACCACCATCCTCGTCACACTCGTTTGTGGTATCGCCC ACGACCACAGGCGTTCGACGAGGTTTGGAAAGACGTCGAGAACCTCGTGA AGGGCACGGATTGTGAGGAGTACATTCTCGGCTTCCTGTACGAGTGAGTA CACGTTTGCGCCTGACTCCACTTTCTTCGTGGTCACTTCGTATGAAGCAT GCGGTTTTTTTGTCATGGCGTACGACATTACATGGTGTTAACCGAATTGT TTTGTGTAGGCGGTGATGGTGCTGGTTGTGCATGCTTACACACAACCACT CGCACCCTGTCTCGCAGGCGACGGAAGCACTGGGCGCGCTGCTTCCACCC CACCGTCATGACGTTGGATATGACATCCTCGCAGCGCGTCGAGGGCACTT TTAGCGTTCTCAAGAAAGACCGCATATTACGAAGAAACTCGACCTTTCGC CAATTGAGGGCCAAGTGCGATCGAGTTGCGCAAGACCTACTCCTTGCATC CACAATGTGAGTGGCTTGTGGTGGCTTCCTGCTTTAAAATTACGTCGATA TTTTGGGGCGCACCGTGCGAGAAGTGAAATGGGGGCCGGCGGGGCCGCCG CTCAGTTCTCTGTCATGGCGCCATGTTTTCGTAGGCATGTCGGACGCGTC GCCAATTTGTACAAAGATGACGGAACATACGCCACCATACGTCCGACCGC AAACATCCATACCGCAGGCAAGCCACGAAGCATACCTCCCTAGGGAAAGG CTTCGTGGAAAGCGACGTCAAGAAATCTATGGAGAAGGTCACGACGGAGT ACGCAAAGGTTGGAGCCAGCAAGTACGCTGATAAGGCGAACACGCCCAGT GACCTGCTTTGAGTGCCCGTGTCGCATTATCTGTATGAAGTGGTACGTGC ATGTAATGCCGTTACAGAGCGCAGTACTTCCGCAGATTCCCCGTAACACC GCCACTTGTTTCCTCTCGCCTTTCCCCGCATCCCCTGCGCCTGTACGCGC CTGTACTACAACAGGAGATTTGGGCCGAAATGATGGCGAGCTCGGCGTAC GATTCTTCCATCGTATCGGAAGGACAAGCCTCAATGCAGTCCCTTCAGAA CTTGGTCACGCGATCGGCCAGTGAGTTGAACGATGCGACGAACGGTAGTG GCGACGTGTGCTGCCAGGTGCCCGAAAAGGTCTTTCAGGAAGATGAAGCA CCCGATACTACCATGTTCGGCACCACATCGTTACATTCCTTCTGCCGTCT TGTAGAGCGCGTGGAAATTGATTGCATCGTCAAGGTCTTGTATAAACACA AGGCGGACCGTAAGGTGGGCCACCTTGTCGTAGTCGGTCCCGGTGGGTTT CAGCTTTGCACGTGCTTACAACTATTGAGACGGGGGTTGCAGTGTAGGCA CGTCGTCGCCGCGCTTGTTACACAATTGAAGCACGCTGACGAGTTCCAAG GGCAAAGCATTCACCCACGGTGGCGTTCGTCTGTTGCACCGTGGAGTATA GAAAAAGTGCCTCTGGGTACGTTTGACGGGGATGCCGATGGTTCGTACGA TGGCGGGTTCACCGGTGAATGGGAGCAGCCCGGTGATTTCGAAGACTTGC AGGGAGACAACACGCAGCTCCGTCTTGTCTGTCTTGAGAGGGAGAGCGAC TGCCAACCTCACCGAGTTGTGCAATCGGGCTATTCGCACCTTCACCGACA GCATGACCCGAGACTCCACCATTGCCGATCAGTCCATGTTCGGTGATTTG ACGCGCCATGTCAATGACTTTGTCCAGAAGCGAAAAAGTGGTGACACAGA GCAGTCTTCGTTCCGA
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Coding sequence (CDS) from alignment at P-littoralis_Contig822:40142..44307+

>mRNA_P-littoralis_Contig822.8.1 ID=mRNA_P-littoralis_Contig822.8.1|Name=mRNA_P-littoralis_Contig822.8.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1200bp|location=Sequence derived from alignment at P-littoralis_Contig822:40142..44307+ (Pylaiella littoralis U1_48)
ATGTCGATATTGAAAAAGGAAATATGTACGAGTTTGCTCTGGCGGTGGAC
GAGGGCATTGTTGGCGACATCAACTAAGGCGTTCGACGAGGTTTGGAAAG
ACGTCGAGAACCTCGTGAAGGGCACGGATTGTGAGGAGTACATTCTCGGC
TTCCTGTACGAGCGACGGAAGCACTGGGCGCGCTGCTTCCACCCCACCGT
CATGACGTTGGATATGACATCCTCGCAGCGCGTCGAGGGCACTTTTAGCG
TTCTCAAGAAAGACCGCATATTACGAAGAAACTCGACCTTTCGCCAATTG
AGGGCCAAGTGCGATCGAGTTGCGCAAGACCTACTCCTTGCATCCACAAT
GCAAGCCACGAAGCATACCTCCCTAGGGAAAGGCTTCGTGGAAAGCGACG
TCAAGAAATCTATGGAGAAGGTCACGACGGAGTACGCAAAGGTTGGAGCC
AGCAAGCGAACACGCCCAGAGATTTGGGCCGAAATGATGGCGAGCTCGGC
GTACGATTCTTCCATCGTATCGGAAGGACAAGCCTCAATGCAGTCCCTTC
AGAACTTGGTCACGCGATCGGCCAGTGAGTTGAACGATGCGACGAACGGT
AGTGGCGACGTGTGCTGCCAGGTGCCCGAAAAGGTCTTTCAGGAAGATGA
AGCACCCGATACTACCATGTTCGGCACCACATCGTTACATTCCTTCTGCC
GTCTTGTAGAGCGCGTGGAAATTGATTGCATCGTCAAGGTCTTGTATAAA
CACAAGGCGGACCGTAAGGTGGGCCACCTTGTCGTAGTCGGTCCCGGTGG
GTTTCAGCTTTGCACGTGCTTACAACTATTGAGACGGGGGTTGCAGTGTA
GGCACGTCGTCGCCGCGCTTGTTACACAATTGAAGCACGCTGACGAGTTC
CAAGGGCAAAGCATTCACCCACGGTGGCGTTCGTCTGTTGCACCGTGGAG
TATAGAAAAAGTGCCTCTGGGTACGTTTGACGGGGATGCCGATGGTTCGT
ACGATGGCGGGTTCACCGGTGAATGGGAGCAGCCCGGTGATTTCGAAGAC
TTGCAGGGAGACAACACGCAGCTCCGTCTTGTCTGTCTTGAGAGGGAGAG
CGACTGCCAACCTCACCGAGTTGTGCAATCGGGCTATTCGCACCTTCACC
GACAGCATGACCCGAGACTCCACCATTGCCGATCAGTCCATGTTCGGTGA
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