mRNA_P-littoralis_Contig12.122.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig12.122.1
Unique NamemRNA_P-littoralis_Contig12.122.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig12.122.1 vs. uniprot
Match: A0A6H5JGB1_9PHAE (EF-hand domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JGB1_9PHAE)

HSP 1 Score: 935 bits (2416), Expect = 0.000e+0
Identity = 468/515 (90.87%), Postives = 483/515 (93.79%), Query Frame = 1
Query:    1 MGILGSPVLGVEHVSSARVKMDELLVCWASQKETAKLLRGYLEAVAADQPLEKPGS-LFQTLSSSPSSSSSLPLSPRSPSPLKSPVGHNTGPAGLSHRSPISKGHWSPHLSPRSERFERFLSPEKRSPSRSSGVSEESSRSRPPEASQKVAHEGRAKVSREDIPCFWVKGEGGRGRGRPIPLDSLEARRQEMERLFERHPEGLGVDDFVPVTKTLCGFPSFFNAVLYKRIFARSQQAQTLAAAQENKRSTPDGDNLEGPPSVQDVGADELPTDARIPMALFEEFWRDEIETYDHIDRFFRLVKKPENQFIEKDDLQPFIRELLLYHPGLEFLEAHPDFHPKYATTVTTRIFYIVNTSRCGRISQGELRRSNLVEVFNTVDEEEDINKVTEYFSYEHFYVVFCRFYELDADRDGRLRGEDLIKYGEHGLSRLIVDRIMSVGPRPFPQGRRNEDGSDPRATMTYEDYVYFMLSEEDRGNEHSLRYWFACVDLDGDGRIGHMEMRLFYDNQVHRMESL 1542
            MGILGSP LG+EHVSSARVKMDELLVCWASQKET KLLRGYLEAVAADQPLEKPGS LFQTLSSSPSSSSSLPLSPRSPSPLKSPVGH+ GP GLSHRSP SK HW+PHLSPRSERFER+LSPEKRSPSRSSGVSEESSRSRPPE S+KVAHEGRAKVSREDIP FWVKGEGGRGRGRPIP DSLE RRQEMERLFERHPEGLGVDDFVPVTKTLCGFPSFFNAVL+KRIFARSQQA+  AA Q+ K + P+GD+ EG  S QD GADELP DARIP+ALFEEFWRDEIETYDHIDRFFRLVKKPEN FIEKDDLQPFIRELLLYHPGLEFLEAHPDFHPKYATTVTTRIFYIVNTSRCGRISQGELRRSNLVEVFNTVDEEEDINKVTEYFSYEHFYVVFCRFYELDADRDGRL  EDLIKYGEHGLSRLIVDRIM+VGPRPFPQGRRNEDGSDPRATMTYEDYVYFMLSEEDRGNEHSLRYWF CVDLDGDGRIGHMEMRLFYDNQ    + +
Sbjct:  105 MGILGSPALGLEHVSSARVKMDELLVCWASQKETVKLLRGYLEAVAADQPLEKPGSSLFQTLSSSPSSSSSLPLSPRSPSPLKSPVGHSAGPTGLSHRSPTSKSHWTPHLSPRSERFERYLSPEKRSPSRSSGVSEESSRSRPPETSRKVAHEGRAKVSREDIPHFWVKGEGGRGRGRPIPRDSLEERRQEMERLFERHPEGLGVDDFVPVTKTLCGFPSFFNAVLFKRIFARSQQARASAARQQEK-TAPEGDDSEGVHSGQDNGADELPPDARIPLALFEEFWRDEIETYDHIDRFFRLVKKPENHFIEKDDLQPFIRELLLYHPGLEFLEAHPDFHPKYATTVTTRIFYIVNTSRCGRISQGELRRSNLVEVFNTVDEEEDINKVTEYFSYEHFYVVFCRFYELDADRDGRLSEEDLIKYGEHGLSRLIVDRIMAVGPRPFPQGRRNEDGSDPRATMTYEDYVYFMLSEEDRGNEHSLRYWFTCVDLDGDGRIGHMEMRLFYDNQARASDGV 618          
BLAST of mRNA_P-littoralis_Contig12.122.1 vs. uniprot
Match: A0A835YP70_9STRA (EF-hand domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YP70_9STRA)

HSP 1 Score: 674 bits (1739), Expect = 4.530e-235
Identity = 373/658 (56.69%), Postives = 444/658 (67.48%), Query Frame = 1
Query:   25 LGVEHVSSARVKMDELLVCWASQKETAKLLRGYLEAVAADQPLEKPGS--LFQTLSSSPSSSSSLPLSPRSPSPLKSPV-GHNT-GPAGLSHRSPISKGH----WSPHLSPRS------ERFERFLSPEKRSPSRSSGVSEESSRSRPPEASQKVAHEGRAKVSREDIPCFWVKGEGGRGRGRPIPLDSLEARRQEMERLFERHPEGLGVDDFVPVTKTLCGFPSFFNAVLYKRIFARSQQAQTLAAAQENKRSTPDGDNLEGPPSVQDVGADELPTDARIPMALFEEFWRDEIETYDHIDRFFRLVKKPENQFIEKDDLQPFIRELLLYHPGLEFLEAHPDFHPKYATTVTTRIFYIVNTSRCGRISQGELRRSNLVEVFNTVDEEEDINKVTEYFSYEHFYVVFCRFYELDADRDGRLRGEDLIKYGEHGLSRLIVDRIMSVGPRPF-PQGRRNEDGSDPRATMTYEDYVYFMLSEEDRGNEHSLRYWFACVDLDGDGRIGHMEMRLFYDNQVHRMESLGHEVVPFEDVVCQMWDMLKLGARTYVTLQDFLRPEALKVGGVFFDALFNLNKFIGFEQRDPFAERQRRNDPFETDWDRFAFHDYNRLAAEDERDVGDS--TDIDGSDDWIVTDDDEGDDDVLGRLGQDGISTAEAPF 1947
            LG+     AR+KMDEL V W  QK T K++R  LEA AA +P+E+P S  L   LSS PSSSSSL  SP     LKSP  GHN  G A    RSP S  H    WSP    R+         ER+LSPEKRS    S    + S S   + +Q  A    +   R  +P F+  GEGGRGRGR +   + + RR+++  +F RHP G+ VDDFVPVTKTLCGFPSFFNAVL++RI A                            S+   G D     ARI +A F  FWR+EIE YD ++RFFR+VK+P+  FI +DD  PFI ELL+YHPGLEFLE HPDFHPKY+ TVT RIFY VNT+  GRI+Q ELRRSNLV +FN VDEEEDINKVT++FSYEHFYV+FCRFYELD+DRD RL  E+L+KYG+H LS  IVDRI  VGPRPF P+     D  D    M+Y+DYVYFMLSEEDRGNE S+RYWF CVDLDGDGRIGH+EMR FYD Q+HRMESLGHEVV + D+VCQ+WDML++G R YVTL+DFLRP+ LKVGGVFFD LFNL+KFI FEQRDPF+ERQ+R DPF+ DWDRFAFHDYNRLAAEDER+  D+   D+D +D+W+              + +D   T EAPF
Sbjct:    7 LGLNAYDGARMKMDELFVLWLGQKGTGKMIRNLLEAAAAGKPIERPASTGLLAALSS-PSSSSSL--SPGGSGQLKSPAHGHNLHGYAQPPPRSPSSSKHAGAAWSPKSGGRAGAGGGGRSVERYLSPEKRSSRTPSDEEPQQSGSSGRQGAQAAA--APSPKQRALVPPFYFPGEGGRGRGRALESGAFDNRREDVLEVFNRHPRGISVDDFVPVTKTLCGFPSFFNAVLFRRIVAAFGDGXXXXXXXXXXEDM----------SLGSGGGD----GARITLAQFTAFWREEIEPYDLVERFFRIVKQPDKDFIGRDDFTPFIAELLMYHPGLEFLENHPDFHPKYSATVTARIFYAVNTAGNGRITQRELRRSNLVAMFNVVDEEEDINKVTQFFSYEHFYVLFCRFYELDSDRDNRLSRENLLKYGDHALSSAIVDRIFEVGPRPFEPEADAPPDWRD---WMSYQDYVYFMLSEEDRGNERSIRYWFTCVDLDGDGRIGHVEMRYFYDVQMHRMESLGHEVVAYADMVCQIWDMLQVGDRPYVTLEDFLRPDVLKVGGVFFDCLFNLSKFIAFEQRDPFSERQKRADPFDADWDRFAFHDYNRLAAEDEREGTDAEGVDLDAADEWV--------------MDEDRHITVEAPF 628          
BLAST of mRNA_P-littoralis_Contig12.122.1 vs. uniprot
Match: A0A7S4T3E3_9STRA (Hypothetical protein n=3 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4T3E3_9STRA)

HSP 1 Score: 453 bits (1166), Expect = 7.450e-150
Identity = 234/478 (48.95%), Postives = 306/478 (64.02%), Query Frame = 1
Query:  604 LGVDDFVPVTKTLCGFPSFFNAVLYKRIFARSQQAQTLAAAQENKRSTPDGDNLEGPPSVQDVGADELPTDARIPMALFEEFWRDEIETYDHIDRFFRLVKKPENQFIEKDDLQPFIRELLLYHPGLEFLEAHPDFHPKYATTVTTRIFYIVNTSRCGRISQGELRRSNLVEVFNTVDEEEDINKVTEYFSYEHFYVVFCRFYELDADRDGRLRGEDLIKYGEHGLSRLIVDRIMSVGPRPFPQGRRNEDGSDP------------------------------RATMTYEDYVYFMLSEEDRGNEHSLRYWFACVDLDGDGRIGHMEMRLFYDNQVHRMESLGHEVVPFEDVVCQMWDMLKLGARTYVTLQDFLRPEALKVGGVFFDALFNLNKFIGFEQRDPFAERQRRNDPFETDWDRFAFHDYNRLAAEDERDVGDSTDIDGSDDWIVTDDDEGDDDVLGRLGQDGISTAEAPF 1947
            L  ++FV +TK +C FP+FFN  LY+RI        +L        STP        PS +   ++E      I   +F  +W+ E+E YD  +RFFRL+K+PE +F+ +DD  P+I+ELL  HPGLEFL  H +F  KYA TV TRIFY VN    GRI+  ++RRS+L+  F  VDEEEDINKVT YFSYEHFYV++CRF+ELD DRD R+  EDL+KYG+H LS +IVDRI    PRPF +G  + DG+                                R  ++YED+++FMLSEED+ NE S+RYWF C+D+DGDG++ +MEMR FY  Q+HRM+ +GHE+VPFED++CQM DM+K G   Y+ ++DFL+ E  +V G  FDALFNLNK++ FEQRDPF ERQ+R D FETDWDRFA  DYNRLA E+E    ++ +ID    W+  DD++ D D    LG  G S  EAPF
Sbjct:   80 LSPENFVRITKDVCNFPTFFNGPLYRRILLLWDTTHSL--------STPSSS-----PSRKGNSSEETAPGKVITYDMFRWYWKKEMEPYDMSERFFRLLKQPEAEFVGRDDFSPYIKELLNDHPGLEFLSNHAEFQEKYAITVITRIFYSVNKCHSGRITSRQIRRSDLLSAFQQVDEEEDINKVTRYFSYEHFYVLYCRFWELDHDRDYRITREDLLKYGDHSLSHMIVDRIFDAAPRPF-EGTSHIDGAGGKEEGEXXXXXXXXXXXXXXXXXXXXNGPINRDYLSYEDFIFFMLSEEDKANEISVRYWFTCIDVDGDGKLNNMEMRSFYAVQLHRMQCMGHEIVPFEDMLCQMIDMIKPGNNDYLVVEDFLQVECAQVSGALFDALFNLNKYLQFEQRDPFMERQKREDEFETDWDRFACIDYNRLAMEEEAREEEAMEID----WVTVDDEDDDGDDFNSLGLGGAS--EAPF 537          
BLAST of mRNA_P-littoralis_Contig12.122.1 vs. uniprot
Match: A0A067CZC1_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CZC1_SAPPC)

HSP 1 Score: 454 bits (1167), Expect = 3.850e-149
Identity = 242/492 (49.19%), Postives = 319/492 (64.84%), Query Frame = 1
Query:  484 IPCFWVKGEGGRGRGRPIPLDSLEARRQEMERLFERH---PEGLGVDDFVPVTKTLCGFPSFFNAVLYKRIFARSQQAQTLAAAQENKRSTPDGDNLEGPPSVQDVGADELPTDARIPMALFEEFWRDEIETYDHIDRFFRLVKKPENQFIEKDDLQPFIRELLLYHPGLEFLEAHPDFHPKYATTVTTRIFYIVNTSRCGRISQGELRRSNLVEVFNTVDEEEDINKVTEYFSYEHFYVVFCRFYELDADRDGRLRGEDLIKYGEHGLSRLIVDRIMSVGPRPFPQGRRNEDGSDPRATMTYEDYVYFMLSEEDRGNEHSLRYWFACVDLDGDGRIGHMEMRLFYDNQVHRMESLGHEVVPFEDVVCQMWDMLKLGARTYVTLQDFLRPEALKVGGVFFDALFNLNKFIGFEQRDPFAERQRRNDPFETDWDRFAFHDYNRLAAEDE-RDVGDSTDIDGSDDWIVTDDDEGDDDVLGRLGQDGISTAEAPF 1947
            IP F+   EGGRGRGR    D L+ + +++E  F +    P+G+ VD FV +TK LCGFPSFFN  L++RI       + L              NL+ P        D+L +   + + +F+ +W  EI+ +D+I+RFFRLVK+P+N +IE  D  PF+ ELL YHPGLEFL   P+F  KYA TV  RIFY+V+    GRI+  +LRRSNLVE FN VDEEEDINKV  YFSYEHFYV++C+F+ELD D D  L  +DL++YG H L+R+IVDRI   G RPF   R      D +  ++YED++YFMLSEED+GN  SLRYWF  +D+ GD  I   EMR++YD+Q+HRME LG EVVPFED++CQM D+L           DF RP+ +++ GVFF+ LFNL+KFI FEQRDPF  RQ+  +P  TDWDR+A  +Y RLA E+E R+   + +ID  D W  +DDD    DV+G    +  ++AEAPF
Sbjct:  142 IPRFYFPKEGGRGRGRAYSRDRLDRKERDIEERFRQAGAGPDGITVDSFVSITKDLCGFPSFFNLPLFQRI-------RKLML------------NLDAP-------EDDL-SGRLLTLEMFQTYWAKEIQPFDNIERFFRLVKQPQNDYIEHSDFAPFLHELLKYHPGLEFLSGTPEFQEKYAATVAVRIFYMVDKDSSGRITLRKLRRSNLVEAFNVVDEEEDINKVNAYFSYEHFYVLYCKFWELDTDHDFLLSRDDLMRYGGHALTRIIVDRIFEFGRRPF--ARMQTLSPDEKQKLSYEDFIYFMLSEEDKGNPVSLRYWFELIDIIGDNVIRADEMRVYYDHQIHRMECLGQEVVPFEDIMCQMSDLLHPAIEGDFRFTDFTRPDKIRLSGVFFNVLFNLSKFIEFEQRDPFLLRQQMAEPELTDWDRYARAEYARLAMEEEGRENDTAMEIDTMDGWYGSDDDV---DVMGST--EARASAEAPF 599          
BLAST of mRNA_P-littoralis_Contig12.122.1 vs. uniprot
Match: A0A484DYT6_BRELC (EF-hand domain-containing protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484DYT6_BRELC)

HSP 1 Score: 456 bits (1174), Expect = 1.120e-148
Identity = 250/516 (48.45%), Postives = 328/516 (63.57%), Query Frame = 1
Query:  424 PPEASQKVAHEGRAKVSRE-----DIPCFWVKGEGGRGRGRPIPLDSLEARRQEMERLFERHPEGLGVDDFVPVTKTLCGFPSFFNAVLYKRIFARSQQAQTLAAAQENKRSTPDGDNLEGPPSVQDVGADELPTDARIPMALFEEFWRDEIETYDHIDRFFRLVKKPENQFIEKDDLQPFIRELLLYHPGLEFLEAHPDFHPKYATTVTTRIFYIVNTSRCGRISQGELRRSNLVEVFNTVDEEEDINKVTEYFSYEHFYVVFCRFYELDADRDGRLRGEDLIKYGEHGLSRLIVDRIMSVGPRPFPQGRRNEDGSDPRATMTYEDYVYFMLSEEDRGNEHSLRYWFACVDLDGDGRIGHMEMRLFYDNQVHRMESLGHEVVPFEDVVCQMWDMLKLGARTYVTLQDFLRPEALKVGGVFFDALFNLNKFIGFEQRDPFAERQRRNDPFETDWDRFAFHDYNRLAAEDE-RDVGDSTDIDGSDDWIVTDD--DEGDDDVLGRLGQDGISTAEAPF 1947
            PP  SQK A E    ++RE      IP F+  GE  RGR R +  D++  +  ++E  F   PEG+ V+DFV +TK LCGFPSFFNA  ++RI A      T     E  R   D  +  G P+  D G        RI   +F+ +W  E+   D ++RFFR+VK+P++ FIE+DD  PF+ ELL YHPGLEFL   P+F  KYA TV  RIFY V+    GRI+  +LRRSNL+  FNTVDEEEDINKV  YFSYEHFYV++C+F+ELD D D  L  +DL++YG H L+R+IVDRI   G RPF   R     ++ +  M+YED++YFMLSEED+ N  S+RYWF  +D + DG +   EMR+FY +Q+HRME LGHEVVPFED++CQ+ D+L          +DF+RP+ ++V GVFF+ LFNL+KFI FEQRDPF  RQ+  +P  TDWDR+A  +Y RLA E+E RD   + DID  D W V+D+  +E  +      G +G  T EAPF
Sbjct:  213 PPLKSQK-AEETTDNLARETLKHAQIPQFYSPGENRRGRLRGLSTDAMMRKAVDIEARFREFPEGMKVEDFVAITKDLCGFPSFFNAPFFRRILA------TCRVVDETTRKCEDACSS-GSPTSADGGV----APQRILKDVFKNYWMREMAPCDSVERFFRVVKQPKSDFIERDDFAPFLHELLKYHPGLEFLGGTPEFQEKYALTVVVRIFYSVDRDSSGRITLRKLRRSNLISAFNTVDEEEDINKVNSYFSYEHFYVLYCKFWELDTDHDFLLSPDDLVRYGGHALTRIIVDRIFERGRRPF--ARFQTLTAEEKKKMSYEDFIYFMLSEEDKANAVSIRYWFELIDTNDDGVLRADEMRVFYRDQIHRMECLGHEVVPFEDILCQLSDLLHPEKEGEFYHKDFIRPDKIRVSGVFFNVLFNLSKFIEFEQRDPFLLRQQLAEPELTDWDRYARAEYARLAMEEESRDEDTAMDIDTMDGWYVSDEQEEEASEGTANAAGTEG-RTVEAPF 713          
BLAST of mRNA_P-littoralis_Contig12.122.1 vs. uniprot
Match: H3HBJ4_PHYRM (EF-hand domain-containing protein n=15 Tax=Phytophthora TaxID=4783 RepID=H3HBJ4_PHYRM)

HSP 1 Score: 455 bits (1171), Expect = 1.910e-148
Identity = 248/518 (47.88%), Postives = 328/518 (63.32%), Query Frame = 1
Query:  403 EESSRSRPPEASQKVAHEGRAKVSREDIPCFWVKGEGGRGRGRPIPLDSLEARRQEMERLFERHPEGLGVDDFVPVTKTLCGFPSFFNAVLYKRIFARSQQAQTLAAAQENKRSTPDGDNLEGPPSVQDVGADELPTDARIPMALFEEFWRDEIETYDHIDRFFRLVKKPENQFIEKDDLQPFIRELLLYHPGLEFLEAHPDFHPKYATTVTTRIFYIVNTSRCGRISQGELRRSNLVEVFNTVDEEEDINKVTEYFSYEHFYVVFCRFYELDADRDGRLRGEDLIKYGEHGLSRLIVDRIMSVGPRPFPQGRRNEDGSDPRATMTYEDYVYFMLSEEDRGNEHSLRYWFACVDLDGDGRIGHMEMRLFYDNQVHRMESLGHEVVPFEDVVCQMWDMLKLGARTYVTLQDFLRPEALKVGGVFFDALFNLNKFIGFEQRDPFAERQRRNDPFETDWDRFAFHDYNRLAAEDE-RDVGDSTDIDGSDDWIVTDDDEGD--DDVLGRLGQDGISTAEAPF 1947
            EE+ +   P A Q +A +   +V   +IP F+  GE  RGR R +  D++  +  +++  F   P+G+ V+DFV +TK LCGFPSFFNA  ++RI A     +T         S+P  D    P S    GA       RI   +F  +W  E+   D ++RFFR+VK+P+N FIE+DD  PF+ ELL YHPGLEFL   P+F  KYA TV  RIFY V+    GRI+  +LRRSNL+  FNTVDEEEDINKV  YFSYEHFYV++C+F+ELD D D  L  +DL++YG H L+R+IVDRI   G RPF   R     ++ +  M+YED++YFMLSEED+ N  S+RYWF  +D + DG +   EMR+FY +Q+HRME LGHEVVPFED++CQM D+L          +DF+RP+ ++V GVFF+ LFNL+KFI FEQRDPF  RQ+  +P  TDWDR+A  +Y RLA E+E RD   + DID  D W V+D+ E D  +        +G  T EAPF
Sbjct:  195 EETPKVEEPAADQLMAEDAPKQV---EIPKFYTPGETRRGRLRGLSTDAMGRKAVDIDARFREFPDGMKVEDFVAITKDLCGFPSFFNAPFFRRILATESTGETSP----KPPSSPAADESASPTSAD--GA----VPQRITKDMFLSYWMREMAPCDSVERFFRVVKQPKNDFIERDDFAPFLHELLKYHPGLEFLGGTPEFQEKYALTVVVRIFYSVDRDSSGRITLRKLRRSNLISAFNTVDEEEDINKVNSYFSYEHFYVLYCKFWELDTDHDFLLSPDDLVRYGGHALTRIIVDRIFERGRRPF--ARIQTLTAEEKKKMSYEDFIYFMLSEEDKANPVSIRYWFELIDTNEDGVLRADEMRVFYRHQIHRMECLGHEVVPFEDILCQMSDLLHPEKEGEFYHRDFIRPDKIRVSGVFFNVLFNLSKFIEFEQRDPFLLRQQLAEPELTDWDRYARAEYARLAMEEESRDEDTAMDIDTMDGWYVSDEQEEDAPEGSADNAAGEG-RTVEAPF 696          
BLAST of mRNA_P-littoralis_Contig12.122.1 vs. uniprot
Match: A0A7S3LF76_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3LF76_9STRA)

HSP 1 Score: 451 bits (1160), Expect = 3.360e-148
Identity = 232/454 (51.10%), Postives = 305/454 (67.18%), Query Frame = 1
Query:  592 HPEGLGVDDFVPVTKTLCGFPSFFNAVLYKRIFARSQQAQTLAAAQENKRSTPDGDNLEGPPSVQDVGADELPTDARIPMALFEEFWRDEIETYDHIDRFFRLVKKPENQFIEKDDLQPFIRELLLYHPGLEFLEAHPDFHPKYATTVTTRIFYIVNTSRCGRISQGELRRSNLVEVFNTVDEEEDINKVTEYFSYEHFYVVFCRFYELDADRDGRLRGEDLIKYGEHGLSRLIVDRIMSVGPRPFPQGRRNEDGSDPRATMTYEDYVYFMLSEEDRGNEHSLRYWFACVDLDGDGRIGHMEMRLFYDNQVHRMESLGHEVVPFEDVVCQMWDMLKLGARTYVTLQDFLRPEALKVGGVFFDALFNLNKFIGFEQRDPFAERQRRNDPFETDWDRFAFHDYNRLAAEDERDVGDSTDIDGSDDWIVTDDDEG--DDDVLGRLGQDGISTAEAPF 1947
            H + L V++FV +TK +C FPSFFN  LY+RI         L  +++ ++S         P  V             + + + E FW+ E+E  D  DRFFRLVK+P+N +I +DD  PFIR LL  HPGLEFL +H +F  KYA TV TRIFY VN    GRI+  ++RRS+L+E F  VDEEEDIN+VT YFSYEHFYV++CRF+ELD DRD R+  EDL+KYG+  LS +IVDRI    PRPF      ED +  R  ++YED++YFMLSEED+ NE ++RYWF+CVD+DGDG++ +MEMR FY  Q+HRM+ +GHE+VPFED++CQM DM+K     ++ ++DFL+PE   V G  FDALFNLNK++ FEQRDPF ERQ+R D FE DWDRFA  DYNRLA E+E    ++ +ID    W+  D+DE   +D +   +G  G S +EAPF
Sbjct:  177 HRKYLTVENFVRITKDICRFPSFFNVPLYQRIL-------DLWNSRDLEQS---------PMEV-------------VTLEMVEWFWKTEMEPNDPCDRFFRLVKQPKNDYIIRDDFLPFIRALLDDHPGLEFLSSHAEFQEKYAVTVITRIFYCVNKCHSGRITSRQVRRSDLLEAFQQVDEEEDINRVTRYFSYEHFYVLYCRFWELDHDRDYRITREDLLKYGDRSLSHMIVDRIFDAAPRPF------EDENPNREFLSYEDFIYFMLSEEDKYNEVAVRYWFSCVDVDGDGKLNNMEMRSFYAVQLHRMQCMGHEIVPFEDMLCQMMDMIKPANADFLVVEDFLQPECCNVSGALFDALFNLNKYLLFEQRDPFVERQKREDEFECDWDRFACVDYNRLAMEEEVREEEAMEID----WVTVDEDEQAHNDAMQDGMGSAGASASEAPF 591          
BLAST of mRNA_P-littoralis_Contig12.122.1 vs. uniprot
Match: A0A8K1CJX2_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CJX2_PYTOL)

HSP 1 Score: 453 bits (1165), Expect = 4.790e-148
Identity = 237/489 (48.47%), Postives = 314/489 (64.21%), Query Frame = 1
Query:  484 IPCFWVKGEGGRGRGRPIPLDSLEARRQEMERLFERHPEGLGVDDFVPVTKTLCGFPSFFNAVLYKRIFARSQQAQTLAAAQENKRSTPDGDNLEGPPSVQDVGADELPTDARIPMALFEEFWRDEIETYDHIDRFFRLVKKPENQFIEKDDLQPFIRELLLYHPGLEFLEAHPDFHPKYATTVTTRIFYIVNTSRCGRISQGELRRSNLVEVFNTVDEEEDINKVTEYFSYEHFYVVFCRFYELDADRDGRLRGEDLIKYGEHGLSRLIVDRIMSVGPRPFPQGRRNEDGSDPRATMTYEDYVYFMLSEEDRGNEHSLRYWFACVDLDGDGRIGHMEMRLFYDNQVHRMESLGHEVVPFEDVVCQMWDMLKLGARTYVTLQDFLRPEALKVGGVFFDALFNLNKFIGFEQRDPFAERQRRNDPFETDWDRFAFHDYNRLAAEDERDVGDST-DIDGSDDWIVTDDDEGDDDVLGRLGQDGISTAEAPF 1947
            IP F++ GE  RGR R    D++  +  +++  F+  P+G+ V+DFV +TK LCGFPSFFNA  ++RI         LAAA   +        L  P +  D          +I   +F  +W+ E+  +D ++RFFR+VK+P+N FIE+DD  PF+ ELL YHPGLEFL   P+F  KYA TV  RIFY V+    G+I+  +LRRSNL+E FNTVDEEEDINKV  YFSYEHFYV++C+F+ELD D D +L  +DL +YG H L+R+IVDRI   G RPF   R      + +  M+YED++YFMLSEED+ N  SL+YWF  VD + DG I   EMR+FY +Q+HRME LGHEVVPFED++CQM D+L          +DF++ + ++V GVFF+ LFNL+KFI FEQRDPF  RQ+  +P  TDWDR+A  +Y RLA E+E    DS  DID  D W V+D+ E D +++         T EAPF
Sbjct:  197 IPRFYIPGESRRGRLRTFSTDTIARKASDIDGRFQDFPDGMKVEDFVAITKDLCGFPSFFNAPFFRRI---------LAAANNGE--------LPSPTATDDS--------LKITKEMFLPYWQKELAPFDDVERFFRVVKQPQNSFIERDDFAPFLHELLKYHPGLEFLAGTPEFQEKYALTVVVRIFYSVDRDSSGKITLRKLRRSNLLESFNTVDEEEDINKVNAYFSYEHFYVLYCKFWELDTDHDFQLSPDDLARYGGHSLTRIIVDRIFEHGRRPF--ARVQNLTPEEKKKMSYEDFIYFMLSEEDKSNPISLQYWFELVDTNEDGVIRSDEMRVFYRHQMHRMECLGHEVVPFEDILCQMSDLLHPAVEGEFFHKDFIKEDKIRVSGVFFNVLFNLSKFIEFEQRDPFLLRQQLAEPELTDWDRYARAEYARLAMEEEGREDDSAMDIDTMDGWYVSDEQEDDAELMVSAASTANRTVEAPF 658          
BLAST of mRNA_P-littoralis_Contig12.122.1 vs. uniprot
Match: A0A6G0XAB2_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XAB2_9STRA)

HSP 1 Score: 451 bits (1159), Expect = 8.640e-148
Identity = 235/470 (50.00%), Postives = 309/470 (65.74%), Query Frame = 1
Query:  484 IPCFWVKGEGGRGRGRPIPLDSLEARRQEMERLFERH---PEGLGVDDFVPVTKTLCGFPSFFNAVLYKRIFARSQQAQTLAAAQENKRSTPDGDNLEGPPSVQDVGADELPTDARIPMALFEEFWRDEIETYDHIDRFFRLVKKPENQFIEKDDLQPFIRELLLYHPGLEFLEAHPDFHPKYATTVTTRIFYIVNTSRCGRISQGELRRSNLVEVFNTVDEEEDINKVTEYFSYEHFYVVFCRFYELDADRDGRLRGEDLIKYGEHGLSRLIVDRIMSVGPRPFPQGRRNEDGSDPRATMTYEDYVYFMLSEEDRGNEHSLRYWFACVDLDGDGRIGHMEMRLFYDNQVHRMESLGHEVVPFEDVVCQMWDMLKLGARTYVTLQDFLRPEALKVGGVFFDALFNLNKFIGFEQRDPFAERQRRNDPFETDWDRFAFHDYNRLAAEDE-RDVGDSTDIDGSDDWIVTDDD 1881
            IP F+   EGGRGRGR    D L  + ++++  F++    PEGL VD FV +TK LCGFPSFFN  L++RI       +T+    +   ++PD D                P    I  A+F+++W  EIE YD+I+RFFRLVK+P   +IE  D  PF+RELL YHPGLEFL   P+F  KYA TV  RIFY+V+    GRI+  +LRRSNLV+ FN VDEEEDINKV  YFSYEHFYV++C+F+ELD D D  L  +DL++YG H L+R+IVDRI   G RPF   R     ++ +  M+YED++YFMLSEED+GN  SLRYWF  +D+D D  I   EMR++Y++Q+HRME LG EVVPFED++CQM D+L          +DF+RPE +++ GVFF+ LFNL+KFI FE RDPF  RQ+  +P  TDWDR+A  +Y RLA E+E R+  ++ +ID  D W  + DD
Sbjct:  137 IPKFYFPKEGGRGRGRAYSRDQLNRKERDIDERFQQAGAGPEGLNVDSFVSITKDLCGFPSFFNYPLFQRI-------RTVVLGPD---ASPDFD----------------PATTFITKAVFQKYWSVEIEPYDNIERFFRLVKQPNKDYIEHSDFAPFLRELLKYHPGLEFLSGTPEFQEKYAATVAVRIFYMVDKDSSGRITLRKLRRSNLVQAFNVVDEEEDINKVNAYFSYEHFYVLYCKFWELDTDHDFLLSRDDLMRYGGHALTRVIVDRIFEAGRRPF--ARIQTLSAEEKQKMSYEDFIYFMLSEEDKGNPVSLRYWFELIDVDDDHVIRADEMRMYYNHQIHRMECLGQEVVPFEDIMCQMTDLLHPDVEGDFKFKDFIRPEKIRLSGVFFNVLFNLSKFIEFEGRDPFLLRQQMAEPELTDWDRYARAEYARLAMEEEGRENENAMEIDTMDGWYDSQDD 578          
BLAST of mRNA_P-littoralis_Contig12.122.1 vs. uniprot
Match: A0A024TTY7_9STRA (Uncharacterized protein n=7 Tax=Aphanomyces TaxID=100860 RepID=A0A024TTY7_9STRA)

HSP 1 Score: 448 bits (1152), Expect = 9.400e-147
Identity = 242/497 (48.69%), Postives = 307/497 (61.77%), Query Frame = 1
Query:  484 IPCFWVKGEGGRGRGRPIPLDSLEARRQEMERLFE---RHPEGLGVDDFVPVTKTLCGFPSFFNAVLYKRIFARSQQAQTLAAAQENKRSTPDGDNLEGPPSVQDVGADELPTDARIPMALFEEFWRDEIETYDHIDRFFRLVKKPENQFIEKDDLQPFIRELLLYHPGLEFLEAHPDFHPKYATTVTTRIFYIVNTSRCGRISQGELRRSNLVEVFNTVDEEEDINKVTEYFSYEHFYVVFCRFYELDADRDGRLRGEDLIKYGEHGLSRLIVDRIMSVGPRPFPQGRRNEDGSDPRATMTYEDYVYFMLSEEDRGNEHSLRYWFACVDLDGDGRIGHMEMRLFYDNQVHRMESLGHEVVPFEDVVCQMWDMLKLGARTYVTLQDFLRPEALKVGGVFFDALFNLNKFIGFEQRDPFAERQRRNDPFETDWDRFAFHDYNRLAAEDE-RDVGDSTDIDGSDDWIVTDDDEGDDDVL-----GRLGQDGISTAEAPF 1947
            IP F+   EGGRGRGR    D L  + ++++  F+     PEGL VD FV +TK LCGFPSFFN  L+ RI A                       L   P   D      P    +   +F  FW  EIE YD+++RFFRLVK+P   +IE  D  PF+ ELL YHPGLEFL   P+F  KYA TV  RIFY+V+    GRI+  +LRRSNLV  FN VDEEEDINKV  YFSYEHFYV++C+F+ELD D D  L  +DL++YG H L+R+IVDRI   G RPF   R     ++ +  M+YED++YFMLSEED+GN  SLRYWF  +DLD D  I   EMR++Y++Q+HRME LG EVVPFED++CQM D+L           DF+RPE +++ GVFF+ LFNL+KFI FE RDPF  RQ+  +P  TDWDRFA  +Y RLA E+E R+  ++ +ID  D W  + DD    DV+      +      +TAEAPF
Sbjct:  145 IPKFYFPKEGGRGRGRAYSRDQLNRKERDIDERFQLAGAGPEGLNVDSFVSITKDLCGFPSFFNLPLFLRIRA-----------------------LNNAPITSDFD----PASTFVSKEMFHTFWTVEIEPYDNVERFFRLVKQPGKDYIEHSDFAPFLHELLKYHPGLEFLSGTPEFQEKYAATVAVRIFYMVDKDSSGRITLRKLRRSNLVHAFNVVDEEEDINKVNAYFSYEHFYVLYCKFWELDTDHDFLLSRDDLMRYGGHALTRVIVDRIFDAGRRPF--ARIQSLSTEDKTKMSYEDFIYFMLSEEDKGNPVSLRYWFELIDLDDDHVIRADEMRMYYNHQIHRMECLGQEVVPFEDIMCQMSDLLHPAVDGDFRFADFIRPEKIRLSGVFFNVLFNLSKFIEFEGRDPFLLRQQMAEPELTDWDRFARAEYARLAMEEEGRENENTMEIDTMDGWYDSQDDV---DVMEATDAAKTDATNRTTAEAPF 609          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig12.122.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JGB1_9PHAE0.000e+090.87EF-hand domain-containing protein n=2 Tax=Ectocarp... [more]
A0A835YP70_9STRA4.530e-23556.69EF-hand domain-containing protein n=1 Tax=Tribonem... [more]
A0A7S4T3E3_9STRA7.450e-15048.95Hypothetical protein n=3 Tax=Ditylum brightwellii ... [more]
A0A067CZC1_SAPPC3.850e-14949.19Uncharacterized protein n=2 Tax=Saprolegnia TaxID=... [more]
A0A484DYT6_BRELC1.120e-14848.45EF-hand domain-containing protein n=1 Tax=Bremia l... [more]
H3HBJ4_PHYRM1.910e-14847.88EF-hand domain-containing protein n=15 Tax=Phytoph... [more]
A0A7S3LF76_9STRA3.360e-14851.10Hypothetical protein n=1 Tax=Amphora coffeiformis ... [more]
A0A8K1CJX2_PYTOL4.790e-14848.47Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A6G0XAB2_9STRA8.640e-14850.00Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
A0A024TTY7_9STRA9.400e-14748.69Uncharacterized protein n=7 Tax=Aphanomyces TaxID=... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig12contigP-littoralis_Contig12:537385..543962 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog4792.ETI37890
PFAMsEF-hand_7
Model size1950
Max annot lvl4776|Peronosporales
KEGG koko:K11583
KEGG Pathwayko03015,ko04071,ko04151,ko04152,ko04261,ko04728,ko05165,map03015,map04071,map04151,map04152,map04261,map04728,map05165
Hectar predicted targeting categoryother localisation
Exons8
Evalue1.26e-152
EggNOG OGsKOG2562@1|root,KOG2562@2759|Eukaryota,3QCJD@4776|Peronosporales
Ec32 ortholog descriptionProtein phosphatase 2A regulatory subunit B-double-prime
Ec32 orthologEc-21_001770.1
DescriptionEF-hand domain pair
Cds size1950
COG categoryA
BRITEko00000,ko00001,ko01009,ko03036
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig12.122.1prot_P-littoralis_Contig12.122.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig12 537385..543962 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789509.5039613-CDS-P-littoralis_Contig12:537384..5375591680789509.5039613-CDS-P-littoralis_Contig12:537384..537559Pylaiella littoralis U1_48CDSP-littoralis_Contig12 537385..537559 -
1680789509.5138538-CDS-P-littoralis_Contig12:538380..5385261680789509.5138538-CDS-P-littoralis_Contig12:538380..538526Pylaiella littoralis U1_48CDSP-littoralis_Contig12 538381..538526 -
1680789509.5237231-CDS-P-littoralis_Contig12:538732..5388401680789509.5237231-CDS-P-littoralis_Contig12:538732..538840Pylaiella littoralis U1_48CDSP-littoralis_Contig12 538733..538840 -
1680789509.5331228-CDS-P-littoralis_Contig12:539118..5393381680789509.5331228-CDS-P-littoralis_Contig12:539118..539338Pylaiella littoralis U1_48CDSP-littoralis_Contig12 539119..539338 -
1680789509.5448732-CDS-P-littoralis_Contig12:541453..5415961680789509.5448732-CDS-P-littoralis_Contig12:541453..541596Pylaiella littoralis U1_48CDSP-littoralis_Contig12 541454..541596 -
1680789509.5559824-CDS-P-littoralis_Contig12:542043..5421341680789509.5559824-CDS-P-littoralis_Contig12:542043..542134Pylaiella littoralis U1_48CDSP-littoralis_Contig12 542044..542134 -
1680789509.565706-CDS-P-littoralis_Contig12:542452..5425861680789509.565706-CDS-P-littoralis_Contig12:542452..542586Pylaiella littoralis U1_48CDSP-littoralis_Contig12 542453..542586 -
1680789509.575753-CDS-P-littoralis_Contig12:543029..5439621680789509.575753-CDS-P-littoralis_Contig12:543029..543962Pylaiella littoralis U1_48CDSP-littoralis_Contig12 543030..543962 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig12.122.1

>prot_P-littoralis_Contig12.122.1 ID=prot_P-littoralis_Contig12.122.1|Name=mRNA_P-littoralis_Contig12.122.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=650bp
MGILGSPVLGVEHVSSARVKMDELLVCWASQKETAKLLRGYLEAVAADQP
LEKPGSLFQTLSSSPSSSSSLPLSPRSPSPLKSPVGHNTGPAGLSHRSPI
SKGHWSPHLSPRSERFERFLSPEKRSPSRSSGVSEESSRSRPPEASQKVA
HEGRAKVSREDIPCFWVKGEGGRGRGRPIPLDSLEARRQEMERLFERHPE
GLGVDDFVPVTKTLCGFPSFFNAVLYKRIFARSQQAQTLAAAQENKRSTP
DGDNLEGPPSVQDVGADELPTDARIPMALFEEFWRDEIETYDHIDRFFRL
VKKPENQFIEKDDLQPFIRELLLYHPGLEFLEAHPDFHPKYATTVTTRIF
YIVNTSRCGRISQGELRRSNLVEVFNTVDEEEDINKVTEYFSYEHFYVVF
CRFYELDADRDGRLRGEDLIKYGEHGLSRLIVDRIMSVGPRPFPQGRRNE
DGSDPRATMTYEDYVYFMLSEEDRGNEHSLRYWFACVDLDGDGRIGHMEM
RLFYDNQVHRMESLGHEVVPFEDVVCQMWDMLKLGARTYVTLQDFLRPEA
LKVGGVFFDALFNLNKFIGFEQRDPFAERQRRNDPFETDWDRFAFHDYNR
LAAEDERDVGDSTDIDGSDDWIVTDDDEGDDDVLGRLGQDGISTAEAPF*
back to top

mRNA from alignment at P-littoralis_Contig12:537385..543962-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig12.122.1 ID=mRNA_P-littoralis_Contig12.122.1|Name=mRNA_P-littoralis_Contig12.122.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=6578bp|location=Sequence derived from alignment at P-littoralis_Contig12:537385..543962- (Pylaiella littoralis U1_48)
ATGGGGATCCTTGGATCTCCCGTACTGGGAGTGGAGCATGTTTCTAGCGC CAGAGTGAAGATGGACGAGCTCTTGGTTTGCTGGGCAAGCCAGAAAGAGA CGGCGAAACTACTTAGAGGTTATCTCGAAGCTGTGGCGGCTGACCAACCG CTTGAAAAGCCTGGGTCGCTCTTTCAGACCCTCTCATCCTCGCCGTCTTC ATCTTCGTCGCTGCCTCTGTCACCTCGCTCACCCTCGCCATTGAAGTCGC CAGTTGGGCACAATACGGGTCCTGCAGGATTGTCACATCGCTCGCCAATT TCAAAAGGCCACTGGTCTCCGCATCTGTCCCCTCGATCGGAGAGATTCGA ACGATTCCTTTCTCCGGAGAAAAGGTCGCCGTCTCGATCCTCTGGCGTCT CCGAGGAAAGCTCCCGCTCCCGCCCGCCAGAGGCTTCGCAAAAGGTTGCA CACGAGGGACGAGCGAAAGTGAGCAGAGAAGACATTCCCTGCTTTTGGGT AAAGGGAGAAGGTGGGCGCGGGAGGGGGCGCCCAATACCGCTGGACTCCC TCGAAGCCAGACGCCAGGAAATGGAACGCCTTTTCGAAAGGCACCCCGAG GGGCTTGGTGTGGATGACTTTGTTCCGGTTACGAAGACACTCTGTGGATT CCCGAGTTTTTTCAACGCGGTTCTTTACAAGCGAATATTTGCCCGCAGCC AGCAGGCGCAAACGTTGGCCGCGGCTCAAGAGAACAAGAGATCAACCCCG GACGGGGACAATTTGGAGGGTCCGCCCAGTGTGCAGGATGTTGGAGCGGA CGAACTCCCGACTGACGCACGAATACCCATGGCTCTGTTCGAAGAGTTTT GGAGGGATGAAATCGAGACGTACGACCACATCGACCGATTTTTCCGGCTC GTAAAGAAGCCGGAAAACCAGTTTATCGAGAAGGTGAGGACGGAAACGCT GCTCGTGTATTTCCTGTGGCAGTTGGCACAATTTTGTTTGGATGCGTGAC TGCAAAAGCGTGTCCGTGTGACCATACCATCGTTGGACCGCTCGGAAGCC TTTTTCCGGGTCAACTAAAGGCAACGCTATTTCAGCCGCGCTACATTGTC AGCGTTCATTAGAGGTGACCTAACTGATTTCAACATCGGGACATAAGTTA CGGGATGGGATGTGCGTTGTCACACCCGTATATGAGCCTCAACTGCTGTT GCGGCAGGACTAGCGGTTCGTATGTCAATATTCTTGGGCACTAGTCGTTG GCAGGCTGCATCCTCTCCTGAGCACATTATGAACTGCCAAGCATTCTGGG GTGTCCTGTATAGTGTTCAGATTGTGTGGGAGCCGCCGCATCCTTGCCGA AATATGTTTTGCTTATGTTGCTGCAGGACGACCTGCAACCTTTCATCAGG GAACTGCTTCTTTATCACCCAGGGCTGGAGTTTCTGGAGGCTCACCCCGA CTTCCACCCTAAGTACGCAACAACCGTCACCACGAGAATTTTTTACATCG TCAACACGAGGTAAATTTATCCATACTGTTCAAGTACAGAGGTGGCCAAA ATGTCACACTACGAAACCTACCGTAAAGCAGGAGTGCCATTTTGCCCATT TTTGTATCATACATGCGTGGTACACGTTGAATGCAAACAAGTTGGCCTTA TTGCCGTGAAAATTAAGTTTGTGCAGTGTTCGGAACGTTGTTTTGTTTTT GTCTTTCGATGCGCCTATTACTCCCGGCGAAGGGTCCGAGGTTATTAAGA CAGTGCGTGGCAGGTCGAAGTCTTCATTCATACCCGTGAGTGCTTGGCTG AACATTCAGCTGTGTTTGCTACTCGCAGTCGATGTGGACGTATTAGCCAA GGCGAACTACGGCGGAGCAACCTAGTGGAGGTATTCAACACGGTGGATGA GGAGGAGGACATCAACAAGGTGAGAAGAAAGCCCCACATTTCAAATCGAG CGCAATCGAAGTAAGTAGAAGGGTTTTTTTCGACGCTACATCGAAACTAC ACCACGAAGCCTACACCTGGTAAATAAATACTTCGTACACCCATATGTAT ATCGTTGAAACCAGCTGTATGGCACGGCTGAGAGATCAGAGATTGACCCG CTCGACAGGAGGGCCCGGGTGATTCGCCTGGTACGTGGTGTGGTGTCTGG TCATCTCCGACCCGTGACGAGGGATCATTGCGTTTCACTTTTTGTCATCG AAGAGCCGGGACAACGAATTACACAGGTGCTTAGGCCTTGGTATTTGTAC AGGGATACAGCAATGGAAAAAAGCCGTCGCCATGAGTATGGAATCGGCGT ATTGACTTTTGTATTAGCGTGGTATTTTCTTGACTCCTGCCGTATTTTTC TTTGCATCGAGAATAGGTCACGGAGTACTTTTCGTATGAGCACTTTTACG TCGTATTCTGCCGGTTCTACGAGCTAGACGCTGACCGAGACGGCCGGCTG CGCGGAGAGGATCTGATCAAGTACGGCGAACATGGCTTGAGCCGCCTCAT CGTGGATAGGTGAACATCCGTATTTTGCTGTGGATTCTATTTTCGACGAT TATCTTTTTCTTGTCCTGGTATGCAGCATACTGAAGCGTCAGTAACACCG ACAACCATACTTTACTTGGAATTTCCTCTCAAGGCTACTCAAGCTTATGT GACACGTATAGGTTCGATCAGGGTGTTTTTTCTGCATGACGGTGGTATCC CCGAATGGGACGTGCATGGGCACAACTCTCTGGTACTCTGTTTGGGACGT AATTCATCTAGAGTCGCACAATCTCGTTTTCAACGTTGTTCGGTAGGGTG TGAATCGAACTCGATTCACCCGATGATATCGCCATAGAGGTTTTCCAATC GGTATCGACGAATCGGGTCGATGTGTTGTCGATGTTTTGCCGATATTTGG GTAGAGGTGTTTGGAGCCTCTACGAAGGCGGTTACTGTATTCCAGACCTG CCGCAGGGCTCCCCGTAAGTGCATGAGACCATATGCGTGTTTGATAATGA GCCCTGGGGCGTTTACTCGTGTGGGTAGCGAGAACACATGACTGAATGCA CACAACCTGTGGTTAGCTTGGCGACCGACAACGACATTTTTGACGATAAA TTCGGCGAAGCCGAAAGCGGGTTCAGCAGGAGGGCGCACAGTGAGCGATC GACTAATGCGTGGCAGGTCGCTGTGGAAGTTCCTCAACCCCTCCCCCCCC GGCTGGCGAGGGGCGGTGTAGAAGAAAAGTACTTTCTGCTTTCCTTCTCA CTATCAATGGGCGTAAAATGGCGAAACGAAGAGGCCTCCTCACATGTTTA ATACTCAATGTGTAATGTTCACGAAATTACCCTGGCTTTTTACAAATAAC AAAAAAAACCCCGCAACTTCTAGTCTGACGAAGCCCCCCCCTCCCCCCTC TTGCACATATTGGAAGCCAATCCACCCTCATGGACAACGTGGTGTGTCAA AGTTTTCCATGATAGATGAAACGTCATTCTCATCCCCGTCAGCGGCAACT GACTCAGCCGCTTCGCGCATACTTTGAATGCACGAGTGGCCCCTCTTCTC CAACGCATCAATGACGTTCGATCGCCCCTCACTTGCAGCGGCCTGCATTA TACTATCTGTATACTGCCACCACGAATCCAGACAGGTTGTGGCCATATCC GCATTGCCCAGCGGCAGCAGCATCCCCGAGCACCCTGACCCAACCCCTGC ATCTCGCCATAAACCACGCCGGCCCTTGACCACAGCCTTTGCACTCGTAG AACATCAACTCGCTGCGCAGTTTCAACCAATCCAACATCTCCTCGTTCCC GTGTCTAGCTACGAAGAACAGGACTCGTTCCGGAACCCCATACAAGTAAT GCTCGAAAGACGTCCACCACAGACCCAAGCCCCACCTAACCACTGCAAAA TGGCCGTGTTCGGCAGCCTTCAGTATGGTAGGCAGAAGTAATTAATTCGA AGCAAATAAGAATTTTTATGTACCTGCTGACGAAGGCAACCTTTTCATGG CGCCACTATACTGTTTGTTAAAGGTGTGCTGGTACCCGTGAAGGTTTTCC CACTTCCGCAGCGTTGCGAGCTTCATTTTTATTTTTTGTTTGCGTGGTAA CCACTCTTTGTTGTTATTTTGAGTGCTTGTGTGGTGGCGTTAATCAATCC TAGGCTGAACGCGTCCGTTCAAAATCATTCGATTTCGCACGGATTGTGAT CGGAAATGAAGCCAAACGGCCCTAAATTTTTCGCATCCGGCGGGGCGCCT CCATCGGGGTCCCCTCGCCAGCCAGGGGGGGGCGGGGGGTCGCACAGCGA GCTCCCTCGCATTCGCTCGATACATCTGCAAATCGGCTGCGCCGATAATC GATGTTTAAAACAGTGACAAACCCAGTCGATTCACAACCCTATTGTTCGG TATGTCTGGAGACTTGTTTTTTCGCCGACGTCACGTTACATGGGCGCGAG TATCTGTTGCAGGTTGGTGCTTGCTTTCTCACAGCTGTCCAGAGCGTATC CAAAGAAAAATGTCGCGAGAGGTGTATCTCAGATGTATACAATGTATCTA GCCTTCAGTTTCCAGGTGTCAAATTTTTTTCACCCATGACTGGTATCATA ACATGTGCTTCGCTTTCTGTTCAGGATCATGTCGGTAGGTCCGCGGCCGT TTCCACAGGGGCGGCGAAATGAGGACGGATCGGATCCCAGGGCCACGATG ACATACGAAGACTATGTATACTTCATGCTCAGTGAAGAAGATCGAGGGAA TGAGCACAGTCTGCGATACTGGTTCGCATGCGTGGACCTTGATGGGGATG GGCGCATCGGCCACATGGAGATGCGCTTGTTTTATGACAATCAGGTGAGA CTGTGTTACGTGAAGGAGGCACCTGAACCCATGAATCGCTCGTATCGTAG ACAACTGGGAATGCAGAGTAGAATTTAACATCTGCGTTCGAAGAGGCACA AGGCGTCATACGTTTCGTGATTGCCTGAAGGTATACCATTTGTACGATAT GGTGTGCTGGAATATGTACATGGGCGCTAGGACCCGAAGGTGCAGGTGCT TACTGAGGTGTGTGCTGTTGATGCATCAAATTGCATCTGACGTTGCTTCA CGAATCATACTTTCTACAACAGGTCCACCGGATGGAGTCATTGGGCCACG AGGTTGTGCCTTTTGAAGACGTCGTCTGCCAGATGTGGGACATGCTCAAG CTTGGAGCCCGCACCTACGTCACCCTACAGGTGGGCCCTGACGCTACTAG TGCCAGCGCCATTTTTAACTTCAAGGAGCATTGCTTACGTACGTCGTACT CCCAGTTCCGTGTACAATCGTCGGATAGCGGCGTCGTGATTCGCAACGTA TCGGTGGCTGGTTTCACCCTGCGAGTATGATATGTCAAATCTCTCCTTGA AACGCAAAATGCACCGATGCGTTCTGCGGTTCGCAGGACTTTCTGAGGCC GGAGGCATTGAAGGTCGGCGGAGTTTTCTTCGATGCCCTGTTCAACTTGA ACAAATTCATTGGCTTTGAGCAACGAGACCCATTTGCAGAACGCCAGAGG AGGAACGATCCGTTCGAGACAGATTGGGACAGGTGAGTGACATGGCTTGA TGTTGGTGACGCATCACAAAGTCGCTTTCGAGCACGTGTGCTTGAAACGC AGTTTCCGGACGCGTGTTTCCACGTACCGCATGATAACTAAAACATGAAA GGGGTGTGCGCAAAAAAAATACGTGGATGACACGTGTACCTGTCGTTTAC GTGTTTCCCTTGCGTTTGGTTGTGGGGATGAGGGAACCAGCGCCAAATTC GTCTGAGCTGCGTTCTGATCACACACTTTTATCTACCGAAAATCCTCGAA CGACGGAGCAGCGCACACGTTACCTCGCAATCAGGAGGACCGGGAGGATC AGACGCTTCCCTCCAACTCAGCCAAAGTCACACGTAACAAGGTCTCATCC TCGTGTCGGCTAGGCCAAGAGTGTTGGGGCCGGCCACAGTTGTAGTAAAA TCAGCAGTGTAGAGCCCTCAGCTCCTGCACTGATGCTCACCCTCACTGGT GGCCTATTTCATTCAAAAACAACACAGCCACCAATTTGGAAGGTTTACAC TCTCATAGTTTACACTGTCGCTCTTGGAGTGTTGAAAAGCAGTTGTGTCT CAAAAACGAACCGTTCCACGAGGTCACGCTCTGCTCTTCAGGCAGGTTTG CCAGGTGAATGTGGATTCAGATTTATCACTATTCCGCTTTGCCAAGACGA TGTCCTACAGCACATTCACGGGCATCCCGTTAAACCTCGGGGCCACTTTC CTGTGACGACGATTGAAAAACGCAAAAGGTATGCACCGTGCACGACTGTC AATTACCAAATTCGGACCTACATAACGCTACCCTACATTTCGTGCCGCCA TAGGTTTGCCTTCCACGACTACAATCGGTTGGCTGCAGAGGATGAGCGAG ACGTCGGAGACTCCACCGATATTGATGGTAGCGACGATTGGATTGTGACC GACGACGACGAGGGCGACGATGACGTGTTGGGGAGACTGGGGCAGGACGG CATTTCAACAGCCGAGGCTCCCTTTTAA
back to top

Coding sequence (CDS) from alignment at P-littoralis_Contig12:537385..543962-

>mRNA_P-littoralis_Contig12.122.1 ID=mRNA_P-littoralis_Contig12.122.1|Name=mRNA_P-littoralis_Contig12.122.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1950bp|location=Sequence derived from alignment at P-littoralis_Contig12:537385..543962- (Pylaiella littoralis U1_48)
ATGGGGATCCTTGGATCTCCCGTACTGGGAGTGGAGCATGTTTCTAGCGC
CAGAGTGAAGATGGACGAGCTCTTGGTTTGCTGGGCAAGCCAGAAAGAGA
CGGCGAAACTACTTAGAGGTTATCTCGAAGCTGTGGCGGCTGACCAACCG
CTTGAAAAGCCTGGGTCGCTCTTTCAGACCCTCTCATCCTCGCCGTCTTC
ATCTTCGTCGCTGCCTCTGTCACCTCGCTCACCCTCGCCATTGAAGTCGC
CAGTTGGGCACAATACGGGTCCTGCAGGATTGTCACATCGCTCGCCAATT
TCAAAAGGCCACTGGTCTCCGCATCTGTCCCCTCGATCGGAGAGATTCGA
ACGATTCCTTTCTCCGGAGAAAAGGTCGCCGTCTCGATCCTCTGGCGTCT
CCGAGGAAAGCTCCCGCTCCCGCCCGCCAGAGGCTTCGCAAAAGGTTGCA
CACGAGGGACGAGCGAAAGTGAGCAGAGAAGACATTCCCTGCTTTTGGGT
AAAGGGAGAAGGTGGGCGCGGGAGGGGGCGCCCAATACCGCTGGACTCCC
TCGAAGCCAGACGCCAGGAAATGGAACGCCTTTTCGAAAGGCACCCCGAG
GGGCTTGGTGTGGATGACTTTGTTCCGGTTACGAAGACACTCTGTGGATT
CCCGAGTTTTTTCAACGCGGTTCTTTACAAGCGAATATTTGCCCGCAGCC
AGCAGGCGCAAACGTTGGCCGCGGCTCAAGAGAACAAGAGATCAACCCCG
GACGGGGACAATTTGGAGGGTCCGCCCAGTGTGCAGGATGTTGGAGCGGA
CGAACTCCCGACTGACGCACGAATACCCATGGCTCTGTTCGAAGAGTTTT
GGAGGGATGAAATCGAGACGTACGACCACATCGACCGATTTTTCCGGCTC
GTAAAGAAGCCGGAAAACCAGTTTATCGAGAAGGACGACCTGCAACCTTT
CATCAGGGAACTGCTTCTTTATCACCCAGGGCTGGAGTTTCTGGAGGCTC
ACCCCGACTTCCACCCTAAGTACGCAACAACCGTCACCACGAGAATTTTT
TACATCGTCAACACGAGTCGATGTGGACGTATTAGCCAAGGCGAACTACG
GCGGAGCAACCTAGTGGAGGTATTCAACACGGTGGATGAGGAGGAGGACA
TCAACAAGGTCACGGAGTACTTTTCGTATGAGCACTTTTACGTCGTATTC
TGCCGGTTCTACGAGCTAGACGCTGACCGAGACGGCCGGCTGCGCGGAGA
GGATCTGATCAAGTACGGCGAACATGGCTTGAGCCGCCTCATCGTGGATA
GGATCATGTCGGTAGGTCCGCGGCCGTTTCCACAGGGGCGGCGAAATGAG
GACGGATCGGATCCCAGGGCCACGATGACATACGAAGACTATGTATACTT
CATGCTCAGTGAAGAAGATCGAGGGAATGAGCACAGTCTGCGATACTGGT
TCGCATGCGTGGACCTTGATGGGGATGGGCGCATCGGCCACATGGAGATG
CGCTTGTTTTATGACAATCAGGTCCACCGGATGGAGTCATTGGGCCACGA
GGTTGTGCCTTTTGAAGACGTCGTCTGCCAGATGTGGGACATGCTCAAGC
TTGGAGCCCGCACCTACGTCACCCTACAGGACTTTCTGAGGCCGGAGGCA
TTGAAGGTCGGCGGAGTTTTCTTCGATGCCCTGTTCAACTTGAACAAATT
CATTGGCTTTGAGCAACGAGACCCATTTGCAGAACGCCAGAGGAGGAACG
ATCCGTTCGAGACAGATTGGGACAGGTTTGCCTTCCACGACTACAATCGG
TTGGCTGCAGAGGATGAGCGAGACGTCGGAGACTCCACCGATATTGATGG
TAGCGACGATTGGATTGTGACCGACGACGACGAGGGCGACGATGACGTGT
TGGGGAGACTGGGGCAGGACGGCATTTCAACAGCCGAGGCTCCCTTTTAA
back to top