prot_P-littoralis_Contig82.78.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig82.78.1
Unique Nameprot_P-littoralis_Contig82.78.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length193
Homology
BLAST of mRNA_P-littoralis_Contig82.78.1 vs. uniprot
Match: A0A6H5JGY9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGY9_9PHAE)

HSP 1 Score: 280 bits (717), Expect = 4.600e-92
Identity = 143/186 (76.88%), Postives = 159/186 (85.48%), Query Frame = 0
Query:    8 IFPFTEQRVARRNSRNRAAGTLETKCVEVTKEVFKKKVVEAIIPAIKACWPGGRGRAIYIQQDNAPSHRINDDPDVVAACTADGRNIKLINQPSNSPDTNILDLGFFNSIQSLQDRTTPRTVDELIAEVKRAFHAQTPTILGKVWVSLQAILQEIILAGGDNTFKLPHVKKNGAATSGNPIPREMP 193
            IF FT QR A+RNSRNRAAGT+ETKCVEVTKEVFK+KVV+ + PAIKA WPGGRGR IYIQ DN PSHRIN DPDVVAA  ADG +I+LINQPSNSPDTNILDLGFFN++QSLQDR TPRTVDE I EVKRAF  Q+P+   KVWVSLQAILQ IILA G+NTFKLPH+KK+ AA SG  IP+E+P
Sbjct:   94 IFQFTVQRAAQRNSRNRAAGTMETKCVEVTKEVFKRKVVDEVFPAIKARWPGGRGRTIYIQLDNKPSHRINADPDVVAAGIADGWDIRLINQPSNSPDTNILDLGFFNAVQSLQDRNTPRTVDEFITEVKRAFEEQSPSTHDKVWVSLQAILQ-IILAKGNNTFKLPHLKKDNAANSGRSIPKELP 278          
BLAST of mRNA_P-littoralis_Contig82.78.1 vs. uniprot
Match: A0A6H5K9R2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9R2_9PHAE)

HSP 1 Score: 184 bits (467), Expect = 2.900e-56
Identity = 95/124 (76.61%), Postives = 104/124 (83.87%), Query Frame = 0
Query:   70 DNAPSHRINDDPDVVAACTADGRNIKLINQPSNSPDTNILDLGFFNSIQSLQDRTTPRTVDELIAEVKRAFHAQTPTILGKVWVSLQAILQEIILAGGDNTFKLPHVKKNGAATSGNPIPREMP 193
            DN PSH IN DPDVVAA TADG +I+LINQPSN P TNILDLGFFN+IQSLQDRTTPRTVDE I EVKRAF  Q+P+ L KVW SLQAILQEIILA GDNT KLPH+KK+ AA SG  IP+E+P
Sbjct:    4 DNKPSHCINADPDVVAAGTADGWDIRLINQPSNIPHTNILDLGFFNAIQSLQDRTTPRTVDEFIIEVKRAFEEQSPSTLDKVWESLQAILQEIILAKGDNTIKLPHLKKDKAANSGRSIPKELP 127          
BLAST of mRNA_P-littoralis_Contig82.78.1 vs. uniprot
Match: A0A6H5JRZ6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRZ6_9PHAE)

HSP 1 Score: 169 bits (428), Expect = 3.150e-50
Identity = 87/157 (55.41%), Postives = 120/157 (76.43%), Query Frame = 0
Query:    8 IFPFT----EQRVARRNSRNRAAGTLETKCVEVTKEVFKKKVVEAIIPAIKACWPGGRGRAIYIQQDNAPSHRINDDPDVVAACTADGRNIKLINQPSNSPDTNILDLGFFNSIQSLQDRTTPRTVDELIAEVKRAFHAQTPTILGKVWVSLQAILQ 160
            I+PFT     QR A+RNSRNRAAGT+ T+ VEV +  +K+K++  ++P I+A +P      ++ QQD+AP HR+ D P++VAA  A GR I+LINQP+NSPD N+LDLGFFNSIQSLQDRTTP T+D+L+AEV+RAF AQ+P  + +VW +LQ++ +
Sbjct:   25 IYPFTVQRAAQRAAQRNSRNRAAGTIVTRSVEVNRVTYKEKLINNVLPDIRAKFPAVS--TVFAQQDSAPGHRVMD-PEIVAAA-AQGRRIELINQPANSPDMNVLDLGFFNSIQSLQDRTTPTTIDQLVAEVERAFWAQSPGAVDRVWTTLQSVFR 177          
BLAST of mRNA_P-littoralis_Contig82.78.1 vs. uniprot
Match: UPI002009A106 (uncharacterized protein LOC125220207 n=1 Tax=Salvia hispanica TaxID=49212 RepID=UPI002009A106)

HSP 1 Score: 171 bits (432), Expect = 8.570e-50
Identity = 88/179 (49.16%), Postives = 121/179 (67.60%), Query Frame = 0
Query:    8 IFPFTEQRVARRNSRNRAAGTLETKCV-EVTKEVFKKKVVEAIIPAIKACWPGGRGRAIYIQQDNAPSHRINDDPDVVAACTADGRNIKLINQPSNSPDTNILDLGFFNSIQSLQDRTTPRTVDELIAEVKRAFHAQTPTILGKVWVSLQAILQEIILAGGDNTFKLPHVKKNGAATSG 185
            IFPFTEQ  A+RN++NR AGTLETK +  +TKEV K+ ++  +IP I   WP G+ + I IQQDNA  H  N DPD  AA T +G NI+L+ QP NSPDT++ DLG+F +IQSLQ +T   T+D+L+  V+++FH   P  L  V++SLQ+ + EI+   G N +K+PH+ K     SG
Sbjct:   27 IFPFTEQVPAKRNNKNRCAGTLETKPIASITKEVTKQCIINKVIPTIMEKWPEGKSKFITIQQDNAKPHIANHDPDFRAAATQNGFNIQLVQQPPNSPDTDVNDLGWFRAIQSLQLQTACNTIDDLVKAVEKSFHDLCPVTLDNVFLSLQSCMLEIMRLKGQNCYKIPHMGKASLRRSG 205          
BLAST of mRNA_P-littoralis_Contig82.78.1 vs. uniprot
Match: A0A6A5AA16_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A5AA16_9STRA)

HSP 1 Score: 174 bits (441), Expect = 5.490e-49
Identity = 86/172 (50.00%), Postives = 125/172 (72.67%), Query Frame = 0
Query:    8 IFPFTEQRVARRNSRNRAAGTLETKCVEVTKEVFKKKVVEAIIPAIKACWPGGRGRAIYIQQDNAPSHRINDDPDVVAACTADGRNIKLINQPSNSPDTNILDLGFFNSIQSLQDRTTPRTVDELIAEVKRAFHAQTPTILGKVWVSLQAILQEIILAGGDNTFKLPHVKKN 179
            ++PF E ++A+R S+NR  GT  T  + VTK V+++ +V+ +IPAI+A WPG RG  IY+QQDNA  H   DDP+V+AA   +G NI+L+ QP+ SPD N+LDLGFFN+IQSLQ +TT RT+D+LI  V+ AF      +L K +++LQ +++E + + GDN +KLPH+KK+
Sbjct:  233 LWPFVETQLAKRRSKNRDRGTPVTVPMTVTKPVYRRFLVDKVIPAIQAQWPGRRGATIYVQQDNAKPHVAVDDPEVLAAGRKEGWNIQLMAQPAQSPDFNVLDLGFFNAIQSLQHQTTARTIDDLIKCVEDAFENLAWRVLDKTFMTLQKVMEEAMRSSGDNVYKLPHLKKD 404          
BLAST of mRNA_P-littoralis_Contig82.78.1 vs. uniprot
Match: UPI001C27372B (uncharacterized protein LOC121774291 n=1 Tax=Salvia splendens TaxID=180675 RepID=UPI001C27372B)

HSP 1 Score: 173 bits (439), Expect = 7.220e-49
Identity = 91/172 (52.91%), Postives = 119/172 (69.19%), Query Frame = 0
Query:    8 IFPFTEQRVARRNSRNRAAGTLETKCV-EVTKEVFKKKVVEAIIPAIKACWPGGRGRAIYIQQDNAPSHRINDDPDVVAACTADGRNIKLINQPSNSPDTNILDLGFFNSIQSLQDRTTPRTVDELIAEVKRAFHAQTPTILGKVWVSLQAILQEIILAGGDNTFKLPHVKK 178
            IFPFTEQ  A+RNS+NR AGTLETK +  +TKEV K+ ++  IIPAI   WP GR + I IQQDNA  H  N DPD  AA T +G NI+++ QP NSPDTN+ DLG+F +IQSLQ +TT  T+D+L+  V  +FH   P  L  V++SLQ+ + EI+   G N +K+PH+ K
Sbjct:  226 IFPFTEQVPAKRNSKNRYAGTLETKPIASITKEVTKQCIINKIIPAIMEKWPEGRSKFITIQQDNAKPHIANHDPDFRAAATQNGFNIQIVQQPPNSPDTNVNDLGWFRAIQSLQLQTTCNTLDDLVKAVDMSFHDLCPVTLDNVFLSLQSCMLEIMKVKGQNCYKIPHMGK 397          
BLAST of mRNA_P-littoralis_Contig82.78.1 vs. uniprot
Match: UPI002008F034 (uncharacterized protein LOC125206616 n=4 Tax=Salvia TaxID=21880 RepID=UPI002008F034)

HSP 1 Score: 171 bits (432), Expect = 9.540e-48
Identity = 93/173 (53.76%), Postives = 117/173 (67.63%), Query Frame = 0
Query:    8 IFPFTEQRVARRNSRNRAAGTLETKCVE-VTKEVFKKKVVEAIIPAIKACWPGGRGRAIYIQQDNAPSHRINDDPDVVAACTADGRNIKLINQPSNSPDTNILDLGFFNSIQSLQDRTTPRTVDELIAEVKRAFHAQTPTILGKVWVSLQAILQEIILAGGDNTFKLPHVKKN 179
            IFPFTE   A+R S+NR  GT+ETK +  VTKEV +  ++  IIPAIKA WP    + IYIQQDNA  H    DPD  AA  +DG  I+LI QP+NSPDTNILDLGFF +IQSLQ     +TVDEL+  V  +F   +P  L +V++SLQA L EI+L  G N +K+PH+ K+
Sbjct:  232 IFPFTEVLPAQRKSKNRPRGTMETKAIHSVTKEVMRDCLINKIIPAIKAKWPVWASKDIYIQQDNATPHITAMDPDFQAAANSDGFKIQLICQPANSPDTNILDLGFFRAIQSLQYEKPCKTVDELVGNVCSSFAELSPQTLNRVFLSLQACLTEILLCRGGNGYKVPHINKD 404          
BLAST of mRNA_P-littoralis_Contig82.78.1 vs. uniprot
Match: UPI002009D9EB (uncharacterized protein LOC125194549 n=1 Tax=Salvia hispanica TaxID=49212 RepID=UPI002009D9EB)

HSP 1 Score: 170 bits (430), Expect = 1.880e-47
Identity = 88/178 (49.44%), Postives = 121/178 (67.98%), Query Frame = 0
Query:    8 IFPFTEQRVARRNSRNRAAGTLETKCVE-VTKEVFKKKVVEAIIPAIKACWPGGRGRAIYIQQDNAPSHRINDDPDVVAACTADGRNIKLINQPSNSPDTNILDLGFFNSIQSLQDRTTPRTVDELIAEVKRAFHAQTPTILGKVWVSLQAILQEIILAGGDNTFKLPHVKKNGAATS 184
            IFPF E+  A+RNS+NR AGT+ETK ++ +TK+V K  V+  IIPAI A WP G  + I IQQDNA  H  N+D D +AA   +G N+KL+ QP NSPDTN+ DLG+F +IQSLQ +T   T+D+L+  V+++FH  +P  L  V++SLQ  + EI+   G N +K+PH+ KN    S
Sbjct:  229 IFPFIERVPAKRNSKNRRAGTIETKPIDSITKQVTKDCVINKIIPAIMAKWPEGASKQINIQQDNAKPHIKNEDVDFIAAANQNGFNMKLVQQPPNSPDTNVNDLGWFRAIQSLQQQTACNTLDDLLNAVEKSFHELSPISLDNVFMSLQGCMIEIMKCKGQNRYKIPHMGKNALRRS 406          
BLAST of mRNA_P-littoralis_Contig82.78.1 vs. uniprot
Match: UPI001C264D25 (uncharacterized protein LOC121774216 n=2 Tax=Salvia splendens TaxID=180675 RepID=UPI001C264D25)

HSP 1 Score: 169 bits (427), Expect = 2.440e-47
Identity = 92/173 (53.18%), Postives = 116/173 (67.05%), Query Frame = 0
Query:    8 IFPFTEQRVARRNSRNRAAGTLETKCVE-VTKEVFKKKVVEAIIPAIKACWPGGRGRAIYIQQDNAPSHRINDDPDVVAACTADGRNIKLINQPSNSPDTNILDLGFFNSIQSLQDRTTPRTVDELIAEVKRAFHAQTPTILGKVWVSLQAILQEIILAGGDNTFKLPHVKKN 179
            IFPFTE   A+R S+NRA GT+ETK +  VTK V +  ++  IIPAIKA WP G  + IYIQQDNA  H    DP+  A   +DG +I+LI QP NSPDTNILDLGFF +IQSLQ     +TVDEL+  V  +F   +P  L KV++SLQA L EI+   G N +K+PH+ K+
Sbjct:  195 IFPFTEVLPAQRKSKNRARGTMETKAINSVTKAVMRDCLIHKIIPAIKAKWPVGASKDIYIQQDNATPHITAMDPEFQAVAKSDGFDIQLICQPPNSPDTNILDLGFFRAIQSLQHEKPCKTVDELVGNVCSSFTELSPQTLNKVFLSLQACLTEILHCRGGNGYKVPHINKD 367          
BLAST of mRNA_P-littoralis_Contig82.78.1 vs. uniprot
Match: UPI001C25BC63 (uncharacterized protein LOC121745833 n=1 Tax=Salvia splendens TaxID=180675 RepID=UPI001C25BC63)

HSP 1 Score: 162 bits (410), Expect = 2.650e-47
Identity = 86/173 (49.71%), Postives = 117/173 (67.63%), Query Frame = 0
Query:    5 KNTIFPFTEQRVARRNSRNRAAGTLETKCV-EVTKEVFKKKVVEAIIPAIKACWPGGRGRAIYIQQDNAPSHRINDDPDVVAACTADGRNIKLINQPSNSPDTNILDLGFFNSIQSLQDRTTPRTVDELIAEVKRAFHAQTPTILGKVWVSLQAILQEIILAGGDNTFKLPHV 176
            K   F FTEQ  A+RNS+NR AGTLETK +  +TKEV K+ ++  IIPAI   WP GR + I IQQDNA  H  N + D  AA T +G NI+++ QP NSPDTN+ DLG+F +IQSLQ +TT  T+D+L+  V+++FH   P  L  V++SLQ+ + EI+   G N +K+ H+
Sbjct:    9 KYAFFLFTEQVPAKRNSKNRCAGTLETKPIASITKEVTKQCIINKIIPAIMEKWPEGRSKFITIQQDNAKPHIANHESDFRAAATQNGFNIQIVQQPPNSPDTNVNDLGWFRAIQSLQLQTTCDTLDDLVKAVEKSFHDLCPVTLDNVFLSLQSCMLEIMKVKGQNCYKILHI 181          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig82.78.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JGY9_9PHAE4.600e-9276.88Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K9R2_9PHAE2.900e-5676.61Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JRZ6_9PHAE3.150e-5055.41Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
UPI002009A1068.570e-5049.16uncharacterized protein LOC125220207 n=1 Tax=Salvi... [more]
A0A6A5AA16_9STRA5.490e-4950.00Uncharacterized protein n=2 Tax=Aphanomyces astaci... [more]
UPI001C27372B7.220e-4952.91uncharacterized protein LOC121774291 n=1 Tax=Salvi... [more]
UPI002008F0349.540e-4853.76uncharacterized protein LOC125206616 n=4 Tax=Salvi... [more]
UPI002009D9EB1.880e-4749.44uncharacterized protein LOC125194549 n=1 Tax=Salvi... [more]
UPI001C264D252.440e-4753.18uncharacterized protein LOC121774216 n=2 Tax=Salvi... [more]
UPI001C25BC632.650e-4749.71uncharacterized protein LOC121745833 n=1 Tax=Salvi... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 11..170
e-value: 1.8E-28
score: 101.7
NoneNo IPR availablePANTHERPTHR47169OS01G0541250 PROTEINcoord: 5..184

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig82contigP-littoralis_Contig82:380755..381333 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig82.78.1mRNA_P-littoralis_Contig82.78.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig82 380755..381333 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig82.78.1 ID=prot_P-littoralis_Contig82.78.1|Name=mRNA_P-littoralis_Contig82.78.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=193bp
MLPVKNTIFPFTEQRVARRNSRNRAAGTLETKCVEVTKEVFKKKVVEAII
PAIKACWPGGRGRAIYIQQDNAPSHRINDDPDVVAACTADGRNIKLINQP
SNSPDTNILDLGFFNSIQSLQDRTTPRTVDELIAEVKRAFHAQTPTILGK
VWVSLQAILQEIILAGGDNTFKLPHVKKNGAATSGNPIPREMP
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036397RNaseH_sf