mRNA_P-littoralis_Contig82.78.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig82.78.1 vs. uniprot
Match: A0A6H5JGY9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGY9_9PHAE) HSP 1 Score: 280 bits (717), Expect = 4.600e-92 Identity = 143/186 (76.88%), Postives = 159/186 (85.48%), Query Frame = 1
Query: 22 IFPFTEQRVARRNSRNRAAGTLETKCVEVTKEVFKKKVVEAIIPAIKACWPGGRGRAIYIQQDNAPSHRINDDPDVVAACTADGRNIKLINQPSNSPDTNILDLGFFNSIQSLQDRTTPRTVDELIAEVKRAFHAQTPTILGKVWVSLQAILQEIILAGGDNTFKLPHVKKNGAATSGNPIPREMP 579
IF FT QR A+RNSRNRAAGT+ETKCVEVTKEVFK+KVV+ + PAIKA WPGGRGR IYIQ DN PSHRIN DPDVVAA ADG +I+LINQPSNSPDTNILDLGFFN++QSLQDR TPRTVDE I EVKRAF Q+P+ KVWVSLQAILQ IILA G+NTFKLPH+KK+ AA SG IP+E+P
Sbjct: 94 IFQFTVQRAAQRNSRNRAAGTMETKCVEVTKEVFKRKVVDEVFPAIKARWPGGRGRTIYIQLDNKPSHRINADPDVVAAGIADGWDIRLINQPSNSPDTNILDLGFFNAVQSLQDRNTPRTVDEFITEVKRAFEEQSPSTHDKVWVSLQAILQ-IILAKGNNTFKLPHLKKDNAANSGRSIPKELP 278
BLAST of mRNA_P-littoralis_Contig82.78.1 vs. uniprot
Match: A0A6H5K9R2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9R2_9PHAE) HSP 1 Score: 184 bits (467), Expect = 2.900e-56 Identity = 95/124 (76.61%), Postives = 104/124 (83.87%), Query Frame = 1
Query: 208 DNAPSHRINDDPDVVAACTADGRNIKLINQPSNSPDTNILDLGFFNSIQSLQDRTTPRTVDELIAEVKRAFHAQTPTILGKVWVSLQAILQEIILAGGDNTFKLPHVKKNGAATSGNPIPREMP 579
DN PSH IN DPDVVAA TADG +I+LINQPSN P TNILDLGFFN+IQSLQDRTTPRTVDE I EVKRAF Q+P+ L KVW SLQAILQEIILA GDNT KLPH+KK+ AA SG IP+E+P
Sbjct: 4 DNKPSHCINADPDVVAAGTADGWDIRLINQPSNIPHTNILDLGFFNAIQSLQDRTTPRTVDEFIIEVKRAFEEQSPSTLDKVWESLQAILQEIILAKGDNTIKLPHLKKDKAANSGRSIPKELP 127
BLAST of mRNA_P-littoralis_Contig82.78.1 vs. uniprot
Match: A0A6H5JRZ6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRZ6_9PHAE) HSP 1 Score: 169 bits (428), Expect = 3.150e-50 Identity = 87/157 (55.41%), Postives = 120/157 (76.43%), Query Frame = 1
Query: 22 IFPFT----EQRVARRNSRNRAAGTLETKCVEVTKEVFKKKVVEAIIPAIKACWPGGRGRAIYIQQDNAPSHRINDDPDVVAACTADGRNIKLINQPSNSPDTNILDLGFFNSIQSLQDRTTPRTVDELIAEVKRAFHAQTPTILGKVWVSLQAILQ 480
I+PFT QR A+RNSRNRAAGT+ T+ VEV + +K+K++ ++P I+A +P ++ QQD+AP HR+ D P++VAA A GR I+LINQP+NSPD N+LDLGFFNSIQSLQDRTTP T+D+L+AEV+RAF AQ+P + +VW +LQ++ +
Sbjct: 25 IYPFTVQRAAQRAAQRNSRNRAAGTIVTRSVEVNRVTYKEKLINNVLPDIRAKFPAVS--TVFAQQDSAPGHRVMD-PEIVAAA-AQGRRIELINQPANSPDMNVLDLGFFNSIQSLQDRTTPTTIDQLVAEVERAFWAQSPGAVDRVWTTLQSVFR 177
BLAST of mRNA_P-littoralis_Contig82.78.1 vs. uniprot
Match: UPI002009A106 (uncharacterized protein LOC125220207 n=1 Tax=Salvia hispanica TaxID=49212 RepID=UPI002009A106) HSP 1 Score: 171 bits (432), Expect = 8.570e-50 Identity = 88/179 (49.16%), Postives = 121/179 (67.60%), Query Frame = 1
Query: 22 IFPFTEQRVARRNSRNRAAGTLETKCV-EVTKEVFKKKVVEAIIPAIKACWPGGRGRAIYIQQDNAPSHRINDDPDVVAACTADGRNIKLINQPSNSPDTNILDLGFFNSIQSLQDRTTPRTVDELIAEVKRAFHAQTPTILGKVWVSLQAILQEIILAGGDNTFKLPHVKKNGAATSG 555
IFPFTEQ A+RN++NR AGTLETK + +TKEV K+ ++ +IP I WP G+ + I IQQDNA H N DPD AA T +G NI+L+ QP NSPDT++ DLG+F +IQSLQ +T T+D+L+ V+++FH P L V++SLQ+ + EI+ G N +K+PH+ K SG
Sbjct: 27 IFPFTEQVPAKRNNKNRCAGTLETKPIASITKEVTKQCIINKVIPTIMEKWPEGKSKFITIQQDNAKPHIANHDPDFRAAATQNGFNIQLVQQPPNSPDTDVNDLGWFRAIQSLQLQTACNTIDDLVKAVEKSFHDLCPVTLDNVFLSLQSCMLEIMRLKGQNCYKIPHMGKASLRRSG 205
BLAST of mRNA_P-littoralis_Contig82.78.1 vs. uniprot
Match: A0A6A5AA16_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A5AA16_9STRA) HSP 1 Score: 174 bits (441), Expect = 5.490e-49 Identity = 86/172 (50.00%), Postives = 125/172 (72.67%), Query Frame = 1
Query: 22 IFPFTEQRVARRNSRNRAAGTLETKCVEVTKEVFKKKVVEAIIPAIKACWPGGRGRAIYIQQDNAPSHRINDDPDVVAACTADGRNIKLINQPSNSPDTNILDLGFFNSIQSLQDRTTPRTVDELIAEVKRAFHAQTPTILGKVWVSLQAILQEIILAGGDNTFKLPHVKKN 537
++PF E ++A+R S+NR GT T + VTK V+++ +V+ +IPAI+A WPG RG IY+QQDNA H DDP+V+AA +G NI+L+ QP+ SPD N+LDLGFFN+IQSLQ +TT RT+D+LI V+ AF +L K +++LQ +++E + + GDN +KLPH+KK+
Sbjct: 233 LWPFVETQLAKRRSKNRDRGTPVTVPMTVTKPVYRRFLVDKVIPAIQAQWPGRRGATIYVQQDNAKPHVAVDDPEVLAAGRKEGWNIQLMAQPAQSPDFNVLDLGFFNAIQSLQHQTTARTIDDLIKCVEDAFENLAWRVLDKTFMTLQKVMEEAMRSSGDNVYKLPHLKKD 404
BLAST of mRNA_P-littoralis_Contig82.78.1 vs. uniprot
Match: UPI001C27372B (uncharacterized protein LOC121774291 n=1 Tax=Salvia splendens TaxID=180675 RepID=UPI001C27372B) HSP 1 Score: 173 bits (439), Expect = 7.220e-49 Identity = 91/172 (52.91%), Postives = 119/172 (69.19%), Query Frame = 1
Query: 22 IFPFTEQRVARRNSRNRAAGTLETKCV-EVTKEVFKKKVVEAIIPAIKACWPGGRGRAIYIQQDNAPSHRINDDPDVVAACTADGRNIKLINQPSNSPDTNILDLGFFNSIQSLQDRTTPRTVDELIAEVKRAFHAQTPTILGKVWVSLQAILQEIILAGGDNTFKLPHVKK 534
IFPFTEQ A+RNS+NR AGTLETK + +TKEV K+ ++ IIPAI WP GR + I IQQDNA H N DPD AA T +G NI+++ QP NSPDTN+ DLG+F +IQSLQ +TT T+D+L+ V +FH P L V++SLQ+ + EI+ G N +K+PH+ K
Sbjct: 226 IFPFTEQVPAKRNSKNRYAGTLETKPIASITKEVTKQCIINKIIPAIMEKWPEGRSKFITIQQDNAKPHIANHDPDFRAAATQNGFNIQIVQQPPNSPDTNVNDLGWFRAIQSLQLQTTCNTLDDLVKAVDMSFHDLCPVTLDNVFLSLQSCMLEIMKVKGQNCYKIPHMGK 397
BLAST of mRNA_P-littoralis_Contig82.78.1 vs. uniprot
Match: UPI002008F034 (uncharacterized protein LOC125206616 n=4 Tax=Salvia TaxID=21880 RepID=UPI002008F034) HSP 1 Score: 171 bits (432), Expect = 9.540e-48 Identity = 93/173 (53.76%), Postives = 117/173 (67.63%), Query Frame = 1
Query: 22 IFPFTEQRVARRNSRNRAAGTLETKCVE-VTKEVFKKKVVEAIIPAIKACWPGGRGRAIYIQQDNAPSHRINDDPDVVAACTADGRNIKLINQPSNSPDTNILDLGFFNSIQSLQDRTTPRTVDELIAEVKRAFHAQTPTILGKVWVSLQAILQEIILAGGDNTFKLPHVKKN 537
IFPFTE A+R S+NR GT+ETK + VTKEV + ++ IIPAIKA WP + IYIQQDNA H DPD AA +DG I+LI QP+NSPDTNILDLGFF +IQSLQ +TVDEL+ V +F +P L +V++SLQA L EI+L G N +K+PH+ K+
Sbjct: 232 IFPFTEVLPAQRKSKNRPRGTMETKAIHSVTKEVMRDCLINKIIPAIKAKWPVWASKDIYIQQDNATPHITAMDPDFQAAANSDGFKIQLICQPANSPDTNILDLGFFRAIQSLQYEKPCKTVDELVGNVCSSFAELSPQTLNRVFLSLQACLTEILLCRGGNGYKVPHINKD 404
BLAST of mRNA_P-littoralis_Contig82.78.1 vs. uniprot
Match: UPI002009D9EB (uncharacterized protein LOC125194549 n=1 Tax=Salvia hispanica TaxID=49212 RepID=UPI002009D9EB) HSP 1 Score: 170 bits (430), Expect = 1.880e-47 Identity = 88/178 (49.44%), Postives = 121/178 (67.98%), Query Frame = 1
Query: 22 IFPFTEQRVARRNSRNRAAGTLETKCVE-VTKEVFKKKVVEAIIPAIKACWPGGRGRAIYIQQDNAPSHRINDDPDVVAACTADGRNIKLINQPSNSPDTNILDLGFFNSIQSLQDRTTPRTVDELIAEVKRAFHAQTPTILGKVWVSLQAILQEIILAGGDNTFKLPHVKKNGAATS 552
IFPF E+ A+RNS+NR AGT+ETK ++ +TK+V K V+ IIPAI A WP G + I IQQDNA H N+D D +AA +G N+KL+ QP NSPDTN+ DLG+F +IQSLQ +T T+D+L+ V+++FH +P L V++SLQ + EI+ G N +K+PH+ KN S
Sbjct: 229 IFPFIERVPAKRNSKNRRAGTIETKPIDSITKQVTKDCVINKIIPAIMAKWPEGASKQINIQQDNAKPHIKNEDVDFIAAANQNGFNMKLVQQPPNSPDTNVNDLGWFRAIQSLQQQTACNTLDDLLNAVEKSFHELSPISLDNVFMSLQGCMIEIMKCKGQNRYKIPHMGKNALRRS 406
BLAST of mRNA_P-littoralis_Contig82.78.1 vs. uniprot
Match: UPI001C264D25 (uncharacterized protein LOC121774216 n=2 Tax=Salvia splendens TaxID=180675 RepID=UPI001C264D25) HSP 1 Score: 169 bits (427), Expect = 2.440e-47 Identity = 92/173 (53.18%), Postives = 116/173 (67.05%), Query Frame = 1
Query: 22 IFPFTEQRVARRNSRNRAAGTLETKCVE-VTKEVFKKKVVEAIIPAIKACWPGGRGRAIYIQQDNAPSHRINDDPDVVAACTADGRNIKLINQPSNSPDTNILDLGFFNSIQSLQDRTTPRTVDELIAEVKRAFHAQTPTILGKVWVSLQAILQEIILAGGDNTFKLPHVKKN 537
IFPFTE A+R S+NRA GT+ETK + VTK V + ++ IIPAIKA WP G + IYIQQDNA H DP+ A +DG +I+LI QP NSPDTNILDLGFF +IQSLQ +TVDEL+ V +F +P L KV++SLQA L EI+ G N +K+PH+ K+
Sbjct: 195 IFPFTEVLPAQRKSKNRARGTMETKAINSVTKAVMRDCLIHKIIPAIKAKWPVGASKDIYIQQDNATPHITAMDPEFQAVAKSDGFDIQLICQPPNSPDTNILDLGFFRAIQSLQHEKPCKTVDELVGNVCSSFTELSPQTLNKVFLSLQACLTEILHCRGGNGYKVPHINKD 367
BLAST of mRNA_P-littoralis_Contig82.78.1 vs. uniprot
Match: UPI001C25BC63 (uncharacterized protein LOC121745833 n=1 Tax=Salvia splendens TaxID=180675 RepID=UPI001C25BC63) HSP 1 Score: 162 bits (410), Expect = 2.650e-47 Identity = 86/173 (49.71%), Postives = 117/173 (67.63%), Query Frame = 1
Query: 13 KNTIFPFTEQRVARRNSRNRAAGTLETKCV-EVTKEVFKKKVVEAIIPAIKACWPGGRGRAIYIQQDNAPSHRINDDPDVVAACTADGRNIKLINQPSNSPDTNILDLGFFNSIQSLQDRTTPRTVDELIAEVKRAFHAQTPTILGKVWVSLQAILQEIILAGGDNTFKLPHV 528
K F FTEQ A+RNS+NR AGTLETK + +TKEV K+ ++ IIPAI WP GR + I IQQDNA H N + D AA T +G NI+++ QP NSPDTN+ DLG+F +IQSLQ +TT T+D+L+ V+++FH P L V++SLQ+ + EI+ G N +K+ H+
Sbjct: 9 KYAFFLFTEQVPAKRNSKNRCAGTLETKPIASITKEVTKQCIINKIIPAIMEKWPEGRSKFITIQQDNAKPHIANHESDFRAAATQNGFNIQIVQQPPNSPDTNVNDLGWFRAIQSLQLQTTCDTLDDLVKAVEKSFHDLCPVTLDNVFLSLQSCMLEIMKVKGQNCYKILHI 181 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig82.78.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig82.78.1 >prot_P-littoralis_Contig82.78.1 ID=prot_P-littoralis_Contig82.78.1|Name=mRNA_P-littoralis_Contig82.78.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=193bp MLPVKNTIFPFTEQRVARRNSRNRAAGTLETKCVEVTKEVFKKKVVEAIIback to top mRNA from alignment at P-littoralis_Contig82:380755..381333- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig82.78.1 ID=mRNA_P-littoralis_Contig82.78.1|Name=mRNA_P-littoralis_Contig82.78.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=579bp|location=Sequence derived from alignment at P-littoralis_Contig82:380755..381333- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig82:380755..381333- >mRNA_P-littoralis_Contig82.78.1 ID=mRNA_P-littoralis_Contig82.78.1|Name=mRNA_P-littoralis_Contig82.78.1|organism=Pylaiella littoralis U1_48|type=CDS|length=579bp|location=Sequence derived from alignment at P-littoralis_Contig82:380755..381333- (Pylaiella littoralis U1_48)back to top |