mRNA_P-littoralis_Contig82.38.7 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig82.38.7 vs. uniprot
Match: D7G9E8_ECTSI (Two component sensor histidine kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G9E8_ECTSI) HSP 1 Score: 595 bits (1535), Expect = 8.860e-202 Identity = 359/579 (62.00%), Postives = 402/579 (69.43%), Query Frame = 2
Query: 590 MVGSPEFVSLVKSQFNLLATAVPGVGRVVLFVRRENTETGALEFVPAMEYPDRPILMCSVDADGMQMQEGANNPRSSDILVPTTAAAAAAGQAMRAEDLDTPDAIEDEDGSLSAPVVYASLVLGMITVFKNASEEHLSFEGRIKRGGVLAGGDGVVGPGPSVLDDVTSASDGESTAVASSAVWDERDKMLLETVASSVAIGAVLDQKQRWAAVMQVEPLRRVVAESLHQVKNPMTALRTFGKLLLKRLPQDDTLNRELAKDIILQSDRLVDILLPVDAVLGLLATAVERERKAQVPGMVDPKLAEREGLPAAAAGAVXXXXXXXXXXXXXXXXXXXXXXXAADGVVVGVGRENSGIAGSVPKGVQDALLSPSAATTELEESLAWEEEVTAFG---PEEVIRRVARAAQAAAKERRVGFRWRVDDDLPTVVGDERVLEEALSNVVENALKFCKMGRCEGGKDGGVRATVVLRARLSTEAEWGAGSGVVIEVVDNGPGIEAEDLPYIFDRGYRGRQPLQCEVPGTGLGLGIARDTMRSFGGDLEVVN--KDSKED--------DGAWGAGVKLFLPREDRR 2287
MVGSPEFVSLVK+QF +LAT + G RVVL+ RRE+TETG+LEFVPAMEYP+RP S+D DG+QM E + SS++L+P AAAGQ M A D+PDA+E DG LSAP+V++SL+LGMITV KN + DG P PS ++ D E+ V +W ERDK LLET+A SV + AVLDQKQRWAAVMQVEPLR+VVAESLHQVKNPMTALRTFGKLLL+RLPQDDTLNRELAKDIILQSDRLVDILLPVDAVLGLLATAVERER+AQ+PG VQDALLSP A T +EE++A+E + FG E+VI+ V RAAQAAAKERRVGFRWRVD DLP VVGDER LEEALSNVVENALKFCKMGR EGGKDGGVRATVVLRARLS E EWGA SGVVIEVVDNGPGIEAED+PYIFDRGYRGRQPLQC +PGTGLGLGIARDTMRSFGGDLEVVN +D+ D DG WG GVKL+LPR +RR
Sbjct: 1 MVGSPEFVSLVKAQFEVLATVL-GADRVVLYARRESTETGSLEFVPAMEYPERPPPAWSMDIDGVQMHE---HHASSELLLP-----AAAGQEMNA---DSPDAVEGGDGDLSAPIVHSSLLLGMITVIKNGNS------------------DGESRP-PSARENAAPR-DIENARV----LWGERDKRLLETIARSVGVAAVLDQKQRWAAVMQVEPLRKVVAESLHQVKNPMTALRTFGKLLLRRLPQDDTLNRELAKDIILQSDRLVDILLPVDAVLGLLATAVEREREAQMPG------------------------------------------------------------------VQDALLSPPAPTG-MEETVAYE--MMPFGLLSVEDVIQPVTRAAQAAAKERRVGFRWRVDQDLPEVVGDERALEEALSNVVENALKFCKMGRGEGGKDGGVRATVVLRARLSAEPEWGAESGVVIEVVDNGPGIEAEDMPYIFDRGYRGRQPLQCGIPGTGLGLGIARDTMRSFGGDLEVVNMKRDTDGDGGAGGGLKDGGWGTGVKLYLPRGERR 474
BLAST of mRNA_P-littoralis_Contig82.38.7 vs. uniprot
Match: A0A835ZFA0_9STRA (Two component sensor histidine kinase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFA0_9STRA) HSP 1 Score: 327 bits (838), Expect = 2.700e-97 Identity = 244/547 (44.61%), Postives = 304/547 (55.58%), Query Frame = 2
Query: 599 SPEFVSLVKSQFNLLATAVPGVGRVVLFVRRENTETGALEFVPAMEYPDRPILMCSVDADGMQMQEGANNPRSSDILVPTTAAAAA-------AGQAMRAEDLDTPDAIEDEDGSLSAPVVYASLVLGMITVFKNASEEHLSFEGRIKRGGVLAGGDGVVGPGPSVLDDVTSASDGESTAVASSAVWDERDKMLLETVASSVAIGAVLDQKQRWAAVMQVEPLRRVVAESLHQVKNPMTALRTFGKLLLKRLPQDDTLNRELAKDIILQSDRLVDILLPVDAVLGLLATAVERERKAQVPGMVDPKLAEREGLPAAAAGAVXXXXXXXXXXXXXXXXXXXXXXXAADGVVVGVGRENSGIAGSVPKGVQDALLSPSAATTELEESLAWEEEVTAFGPEEVIRRVARAAQAAAKERRVGFRWRVDDDLPTVVGDERVLEEALSNVVENALKFCKMGRCEGGKDGGVRATVVLRARLSTEAEWGAGSGVVIEVVDNGPGIEAEDLPYIFDRGYRGRQPLQCEVPGTGLGLGIARDTMRSFGGDLEVVNK 2218
S E+ SLV++QF+LL TA+ V R L R+EN TG LEF YP + + VDA G Q R+ + +P +AAA ++ A+ L+T A+E+ DG LSAP++Y SLV+GM+TV+++ GG G + W DK LLE VASS+A+GA LDQ+QRWAA QVE LRR+++E+LHQ KNP+TALRTFGKLLL+RLP D LNRELA+DIILQSDRLVD+LLPVD LG LA XXXXXXXXXXXXXXXXXXXXX + G +V V QDA+ V RAA+A A+ RV FRWRVDDDLP V G+ER L+EA+SN+V+NALK+ +M G R V+LR RLST+ +WGA GVVIEV DNGPGI+ DLP +F+RGYRG PL+ PGTGLGLGIARD MR+ GGD+ + N+
Sbjct: 108 SQEYASLVQTQFDLLVTALD-VARCALGFRKENPATGELEFATIAVYPPKKRVWV-VDAQGRSEQ------RTGPLELPGYTSAAALLPQYPFVSVSLSADGLETSAAVENTDGGLSAPLIYGSLVIGMLTVWRDTPP----------------GGSGSXXXXXXXXXXXXXGTQ-----------WRNADKELLEKVASSLAMGAALDQRQRWAAAAQVEELRRMLSETLHQAKNPLTALRTFGKLLLRRLPAADGLNRELAEDIILQSDRLVDLLLPVDDALGALAAXXXXXXXXXXXXXXX---------------XXXXXXXXXXXXXXXXXXXXXXXWQSGAGELVFV---------------QDAM-----------------------------EPVVRAAEAVAQASRVSFRWRVDDDLPGVYGNERALQEAVSNIVDNALKYVRMRGGAGEAPRDARPVVLLRVRLSTDDDWGASRGVVIEVCDNGPGIDPADLPRVFERGYRGGVPLRSGTPGTGLGLGIARDIMRAMGGDISINNR 560
BLAST of mRNA_P-littoralis_Contig82.38.7 vs. uniprot
Match: A0A6H5JXI6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXI6_9PHAE) HSP 1 Score: 282 bits (722), Expect = 6.830e-84 Identity = 203/367 (55.31%), Postives = 238/367 (64.85%), Query Frame = 2
Query: 731 MEYPDRPILMCSVDADGMQMQEGANNPRSSDILVPTTAAAAAAGQAMRAEDLDTPDAIEDEDGSLSAPVVYASLVLGMITVFKNASEEHLSFEGRIKRGGVLAGGDGVVGPGPSVLDDVTSASDGESTAVASSAVWDERDKMLLETVASSVAIGAVLDQKQRWAAVMQVEPLRRVVAESLHQVKNPMTALRTFGKLLLKRLPQDDTLNRELAKDIILQSDRLVDILLPVDAVLGLLATAVERERKAQVPGMVDPKLAEREGLPAAAAGAVXXXXXXXXXXXXXXXXXXXXXXXAADGVVVGVGRENSGIAGSVPKGVQDALLSPSAATTELEESLAWEEEVTAFG---PEEVIRRVARAAQAAAKER 1822
MEYP+RP S+D G+Q E + SS++L+P AA G M A D+PDA+E DG LSAP+VY+SL+LGM+TVFKN + GDG PS ++ + E+ + WDERDK LLET+A SV + AVLDQKQRWAAVMQVEPLR+VVAESLHQVKNPMTALRTFGKLLL+RLPQDDTLNRELAKDIILQSDRLVDILLPVDAVLGLLATAVERER+ Q+ GMVDP A+RE A +A XXXXXXXXXXX S GVQDALLSP + T +EE++A+E + FG E+VI+ V RAAQAAAKER
Sbjct: 1 MEYPERPPPAWSMDIHGVQTHE---HHASSELLLP-----AATGHEMNA---DSPDAVEGGDGDLSAPIVYSSLLLGMMTVFKNGN------------------GDGKARQ-PSTRENSAPKNIEEARVL-----WDERDKRLLETIARSVGVAAVLDQKQRWAAVMQVEPLRKVVAESLHQVKNPMTALRTFGKLLLRRLPQDDTLNRELAKDIILQSDRLVDILLPVDAVLGLLATAVEREREVQMSGMVDPHAAQREDFAATSAXXXXXXXXXXXXXXD-----------------------------STVDGVQDALLSPPSPTG-MEETMAYE--MMPFGLLSVEDVIQPVTRAAQAAAKER 300
BLAST of mRNA_P-littoralis_Contig82.38.7 vs. uniprot
Match: A0A6H5JWW5_9PHAE (Histidine kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWW5_9PHAE) HSP 1 Score: 230 bits (586), Expect = 1.390e-66 Identity = 116/144 (80.56%), Postives = 123/144 (85.42%), Query Frame = 2
Query: 1889 EEALSNVVENALKFCKMGRCEGGKDGGVRATVVLRARLSTEAEWGAGSGVVIEVVDNGPGIEAEDLPYIFDRGYRGRQPLQCEVPGTGLGLGIARDTMRSFGGDLEVVN--KDSKED--------DGAWGAGVKLFLPREDRRR 2290
+EALSNVVENALKFCKMGR EGGKDGGVRATVVLRARLS E EW A SGVVIEVVDNGPGIEAED+PYIFDRGYRGRQPLQC +PGTGLGLGIARDTMRSFGGDLEVVN +D+ D DG WG GVKL+LPR +RRR
Sbjct: 19 QEALSNVVENALKFCKMGRGEGGKDGGVRATVVLRARLSVEPEWAAESGVVIEVVDNGPGIEAEDMPYIFDRGYRGRQPLQCGIPGTGLGLGIARDTMRSFGGDLEVVNMKRDTDGDXXXXXXXKDGGWGTGVKLYLPRGERRR 162
BLAST of mRNA_P-littoralis_Contig82.38.7 vs. uniprot
Match: A0A7S0UAD8_HEMAN (Hypothetical protein n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S0UAD8_HEMAN) HSP 1 Score: 220 bits (561), Expect = 2.950e-58 Identity = 176/564 (31.21%), Postives = 272/564 (48.23%), Query Frame = 2
Query: 599 SPEFVSLVKSQFNLLATAVPGVGRVVLFVRRENTETGALEFVPAMEYPDRPILMCSVDADGMQMQEGANNPRSSDILVPTTAAAAAAGQAMRAEDLDTPDAIEDEDGSLSAPVVYASLVLGMITVFKNASEEHLSFEGRIKRGGVLAGGDGVVGPGPSVLDDVTSASDGESTAVASSAVWDERDKMLLETVASSVAIGAVLDQKQRWA--AVMQVEPLRRVVAESLHQVKNPMTALRTFGKLLLKRLPQDDTLNRELAKDIILQSDRLVDILLPVDAVLGLLATAVERERKAQVPGMVDPKLAEREGLPAAAAGAVXXXXXXXXXXXXXXXXXXXXXXXAADGVVVGVGR--ENSGIAGSVPKGVQDALLSPSAATTELEESLAWEEEVTAFGPEEVIRRVARAAQAAAKERRVGFRWRVDDDLPTVVGDERVLEEALSNVVENALKFCKM--GRCEGGKDGGVRATVVLRARLSTEAEWGAGSGVVIEVVDNGPGIEAEDLPYIFDRGYRGRQPLQCEVPGTGLGLGIARDTMRSFGGDLEVVNKDSKEDDGAWGAGVKLFLP 2272
SPEF SL ++QF +L+ V G R VL+ RRE+ TG LEFVPA YP + V +G + P S + +P +A D D + DG +S P+ Y + V+GM+ +++N SE E +VW +K ++ +ASS+A+ VLDQ+ +++ +Q E LR ++++SLHQVKN ++A+R FGKLLL+RLP DD +NRELAKDI++QSDR+V++L+P D+ G R + +P P L G + A V DG++ + E+S G +G Q + EL E+ + G + V A+QA A+ + F ++ LP V GD R+L+EA+SN+++NALK+ ++ R EG ++ + + ++RL +E +GVVI V D+GPG++ E+LP + RG+RGR L+ PG+GLGL I ++ + GG L +DG + L P
Sbjct: 57 SPEFCSLCQAQFEVLSGLV-GASRCVLYFRREDPLTGKLEFVPAAVYPQTQRVW--VVGEGPE-----GRPSSGPVELPGFISAENLMPEYPFNMPDNADGSDISDGGISVPIQYGNTVIGMLAIWRNPSENESGEE--------------------------------------EDSVWTREEKAHVKNIASSLALAIVLDQRNQFSYNEALQAEKLRSMLSDSLHQVKNSLSAVRMFGKLLLRRLPSDDMMNRELAKDILIQSDRMVELLVPYDSDSG---------RASALPYQKKPMLMLGGGKASDAPAGVDVLGTLSDSVAL-----------GPDGLIGDLSEPLESSEAQGD-EEGEQHVYERLDSELAELRETTGEHQMCDVAG---ALSPVVSASQAIAEFDGIDFEMKIAKTLPEVRGDARILQEAMSNLMDNALKYAQIRTDREEGKARVFLKVSKLAKSRLPKGSE----AGVVIMVEDDGPGVDEEELPELCVRGFRGRASLEAGTPGSGLGLHIVQELVSVMGGKLAFAKA---HEDGGLKVTMTLLRP 543
BLAST of mRNA_P-littoralis_Contig82.38.7 vs. uniprot
Match: A0A7S0NF57_9CRYP (Hypothetical protein n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0NF57_9CRYP) HSP 1 Score: 209 bits (532), Expect = 5.390e-54 Identity = 185/629 (29.41%), Postives = 294/629 (46.74%), Query Frame = 2
Query: 500 GEGEWNEIPPTPXXXXXXXXXXAGGGSEEAMVG--SPEFVSLVKSQFNLLATAVPGVGRVVLFVRRENTETGALEFVPAMEYPDRPILMCSVDADGMQMQEGANNPRSSDILVPTTAAAAAAGQAM-----RAEDLDTPDAIEDEDGSLSAPVVYASLVLGMITVFKNASEEHLSFEGRIKRGGVLAGGDGVVGPGPSVLDDVTSASDGESTAVASSAVWDERDKMLLETVASSVAIGAVLDQKQRWAAVMQVEPLRRVVAESLHQVKNPMTALRTFGKLLLKRLPQDDTLNRELAKDIILQSDRLVDILLPVDAVLG----------------LLATAVERE--RKAQVPGMV---DPKLAEREGLPAAAAGAVXXXXXXXXXXXXXXXXXXXXXXXAADGVVVGVGRENSGIAGSVPKGVQDALLSPSAATTELEESLAWEEEVTAFGPEEVIRRVARAAQAAAKERRVGFRWRVDDDLPTVVGDERVLEEALSNVVENALKFCKMGRCEGGKDGGVRATVVLRARLSTEAEWGAGSGVVIEVVDNGPGIEAEDLPYIFDRGYRGRQPLQCEVPGTGLGLGIARDTMRSFGGDLEVVNKDSKEDDGAWGAGVKLFLPREDRRRRPER 2302
GE + +++ P P AG G + + V SPEF +L ++QF +L+ + G + VL+ RRE+ +TG L+FVPA YP++ + V +G A P S I +P +A + ++ + T + DG +S P+ Y S+VLGM+ V++ +E W E D LE +A S+A+ +LDQK +W +Q E +R++++E+LHQVKN ++A+R FGKLLL+RLP D +NRELA+DI++QSDRLVD+LLP+D++ LL++A +RE R++ MV D +L E G P A E I S+ + + DA+ + E ES + E+V+ + A+QA A+ + F + +DLP V ++R L+EA+SNV++NALK+ + + K + V L + + + + I + DNG G++ +L I + GYRG+ ++PGTGLGL IA+D + G + + N + G V++FLP E RR R +R
Sbjct: 87 GEQDMDKLSPPPKNETK-----AGHGKQNSPVMRVSPEFNALCQAQFEVLS-CILGASKCVLYFRREDAKTGQLDFVPAAVYPEKQRVW--VVGEGP-----AGLPASGPIELPGFFSANSMFPEYPFIKRQSSGIAT---VSLADGGISLPLEYGSVVLGMLAVWRENQKE-----------------------------------------------WQEADLKQLEAIARSLAVAVILDQKHQWQEAVQAESMRKMLSETLHQVKNSLSAVRMFGKLLLRRLPGSDKMNRELARDILIQSDRLVDLLLPIDSMSSPARLRQSRSSGHGKPLLLSSAAQREDARRSMASSMVILDDDELNELVGGPTVA--------------------------------------ERMQIE-SLDRSLDDAMETIRKGGNEQGESKSKSTPTKLCVLEDVLSPIISASQAIAEFEEIKFTCELGNDLPRVRINQRALQEAVSNVLDNALKYVLLKDFKRRK----KPLVSLSTQKDEAGDKKNENFLQIIIEDNGKGVQPHELLRICEEGYRGKDAE--DIPGTGLGLHIAKDLISQMKGKMSIENIEE-----GGGLRVRIFLPTEARRVRRKR 602
BLAST of mRNA_P-littoralis_Contig82.38.7 vs. uniprot
Match: A0A7S4DJM8_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DJM8_HETAK) HSP 1 Score: 166 bits (419), Expect = 8.860e-41 Identity = 108/302 (35.76%), Postives = 164/302 (54.30%), Query Frame = 2
Query: 599 SPEFVSLVKSQFNLLATAVPGVGRVVLFVRRENTETGALEFVPAMEYPDRPILMCSVDA-DGMQMQEGANNPR------SSDILVPTTAAAAAAGQAMRAEDLDTPDAIEDEDGSLSAPVVYASLVLGMITVFKNASEEHLSFEGRIKRGGVLAGGDGVVGPGPSVLDDVTSASDGESTAVASSAVWDERDKMLLETVASSVAIGAVLDQKQRWAAVMQVEPLRRVVAESLHQVKNPMTALRTFGKLLLKRLPQDDTLNRELAKDIILQSDRLVDILLPVDAVLGLLATAVERERKAQVPGM 1483
S E+ L ++QF +++ + G R +F+R + TGALEF P +P D G++ +EG PR ++DIL+PT A +G A + DG L+ ++Y + +G++ ++K E + D+ S D SA W E+D +L+ VA+++A+ AVLDQK+RW MQ++ LRR +AE+LHQVKNP+TA+RTFGKLLL+RLP +D+LNR+LA+D++ QSDRLVD+LLPVD++ VE R+ P +
Sbjct: 116 SQEYSELCQAQFEVVSDML-GAERATVFLRAAHPLTGALEFRPVANFPRTRRRFIGRDGPSGLEAEEG---PRELAGYSAADILLPTYPFMATSGDGCEA-------CTKHADGGLTCTMIYGGMAVGVLAIWKGEDEAN--------------------------FDNTLSNDDDSFIDEGCSANWSEKDCRMLQNVANTLALAAVLDQKERWEHQMQLDGLRRALAETLHQVKNPLTAVRTFGKLLLRRLPAEDSLNRQLARDLLTQSDRLVDLLLPVDSL-------VEAARRLPAPAL 373
BLAST of mRNA_P-littoralis_Contig82.38.7 vs. uniprot
Match: A0A7S0YLT3_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0YLT3_9CRYP) HSP 1 Score: 145 bits (367), Expect = 2.520e-35 Identity = 95/276 (34.42%), Postives = 143/276 (51.81%), Query Frame = 2
Query: 599 SPEFVSLVKSQFNLLATAVPGVGRVVLFVRRENTETGALEFVPAMEYPDRPILMCSVDADGMQMQEGANNPRSSDILVPTTAAAAAAGQAMRAEDLDTPDAIEDEDGSLSAPVVYASLVLGMITVFKNASEEHLSFEGRIKRGGVLAGGDGVVGPGPSVLDDVTSASDGESTAVASSAVWDERDKMLLETVASSVAIGAVLDQKQRWA--AVMQVEPLRRVVAESLHQVKNPMTALRTFGKLLLKRLPQDDTLNRELAKDIILQSDRLVDILLPVD 1420
S EF SL ++QF +L+ V G R VL+ RRE+ TG LEFVPA YP + + G P S + +P +A D+ D + DG +S P+ Y + V+GM+ +++N SE + A W +K ++ +AS++AI VLDQ+ +++ +Q E LR ++++SLHQVKN ++A+R FGKLLL+RLP DD +NRELAKDI++QSDR+V++L+P D
Sbjct: 22 SSEFCSLCQAQFEVLSGLV-GASRCVLYFRREDPLTGKLEFVPASVYPQTQRVWVVGEGPG-------GRPSSGPVELPGFISAENLMPEYPFNMPDSADGSDISDGGISVPIQYGNTVIGMLAIWRNPSENE--------------------------------------SGEAEDRAWTRGEKTQIKNIASTLAIAIVLDQRNQFSYNEALQAEKLRSMLSDSLHQVKNSLSAVRMFGKLLLRRLPGDDMMNRELAKDILIQSDRMVELLVPYD 251
BLAST of mRNA_P-littoralis_Contig82.38.7 vs. uniprot
Match: A0A3S1C655_ANAVA (Sensor histidine kinase n=5 Tax=Nostocaceae TaxID=1162 RepID=A0A3S1C655_ANAVA) HSP 1 Score: 135 bits (340), Expect = 4.170e-30 Identity = 144/564 (25.53%), Postives = 228/564 (40.43%), Query Frame = 2
Query: 590 MVGSPEFVSLVKSQFNLLATAVPGVGRVVLFVRRE--NTETGALEFVPAMEYPDRPILMCSVDADGMQMQEGANN---PRSSDILVPTTAAAAAAG-------QAMRAEDLDTPDAIED---EDGSLSAPVVYASLVLGMITVFKNASEEHLSFEGRIKRGGVLAGGDGVVGPGPSVLDDVTSASDGESTAVASSAVWDERDKMLLETVASSVAIGAVLDQKQRWAA-------VMQVEPLRRVVAESLHQVKNPMTALRTFGKLLLKRLPQDDTLNRELAKDIILQSDRLVDILLPVDAVLGLLATAVERERKAQVPGMVDPKLAEREGLPAAAAGAVXXXXXXXXXXXXXXXXXXXXXXXAADGVVVGVGRENSGIAGSVPKGVQDALLSPSAATTELEESLAWEEEVTAFGPEEVIRRVARAAQAAAKERRVGFRWRVDDDLPTVVGDERVLEEALSNVVENALKFCKMGRCEGGKDGGVRATVVLRARLSTEAEWGAGSGVVIEVVDNGPGIEAEDLPYIFDRGYRGRQPLQCEVPGTGLGLGIARDTMRSFGGDLEVVN 2215
M S +F++L + Q +LL + G V+++ +E T TG + +P + YP+ +L G + EG N P + + +P AG Q D + E+ + P++Y +++G++ GR R W+ER++ ++ +A S+AI +LDQ++ W ++Q E R ++ LHQ +NP+TA+RTFGKLL KRL Q D NR++A I+ +SDRL ++L D V+ L AD + + + SV K Q LL P + SLA E++ + +AQA A+ER + + ++LP V + + L E LSN+++NALK+ G GK R+ + G G+ I DNGPGI EDL ++ +R YRG Q Q E+PGTGLG+ IA+ + G +EV +
Sbjct: 3 MSASSDFIALCREQISLLTQGL-GASLSVVYLTQELVETSTGEAQLIPVVVYPETGVLR-----QGDESAEGNVNKHIPTGNVLALPNRRKLLTAGGFSPHPSQECGTRSTDESNFQEEYLLTGNQIVLPLIYEGVMMGLLVT------------GREDR------------------------------------AWNEREESQIQRIAQSMAIACILDQRRAWLQQQLHQQQILQ-EQQRDLLDNLLHQFRNPLTAIRTFGKLLFKRLRQVDP-NRDVATSIVRESDRLQELLQQFDQVIDLTE---------------------------------------------------------ADLTAISLPESEFVVEASVQKSPQPVLLLPGTGEKMTDCSLA-----------ELLAPLLVSAQAIAQERNLQLLTDIPNNLPFVQANIKALREVLSNIIDNALKYTPAG----GK-----------IRIQAGQKRGNFQGIAIS--DNGPGIPPEDLDHLGERHYRGVQ-AQTEIPGTGLGIAIAKQLIEQMQGKIEVFS 424
BLAST of mRNA_P-littoralis_Contig82.38.7 vs. uniprot
Match: D7DZW9_NOSA0 (GAF sensor signal transduction histidine kinase n=1 Tax=Nostoc azollae (strain 0708) TaxID=551115 RepID=D7DZW9_NOSA0) HSP 1 Score: 133 bits (335), Expect = 2.080e-29 Identity = 135/561 (24.06%), Postives = 237/561 (42.25%), Query Frame = 2
Query: 590 MVGSPEFVSLVKSQFNLLATAVPGVGRVVLFVRRENTET--GALEFVPAMEYPDRPILMCSVDADGMQMQEGANN------PRSSDILVPTTAAAAAAGQAMRAEDLDTPDAIEDED----GSLSAPVVYASLVLGMITVFKNASEEHLSFEGRIKRGGVLAGGDGVVGPGPSVLDDVTSASDGESTAVASSAVWDERDKMLLETVASSVAIGAVLDQKQRWAA-------VMQVEPLRRVVAESLHQVKNPMTALRTFGKLLLKRLPQDDTLNRELAKDIILQSDRLVDILLPVDAVLGLLATAVERERKAQVPGMVDPKLAEREGLPAAAAGAVXXXXXXXXXXXXXXXXXXXXXXXAADGVVVGVGRENSGIAGSVPKGVQDALLSPSAATTELEESLAWEEEVTAFGPEEVIRRVARAAQAAAKERRVGFRWRVDDDLPTVVGDERVLEEALSNVVENALKFCKMGRCEGGKDGGVRATVVLRARLSTEAEWGAGSGVVIEVVDNGPGIEAEDLPYIFDRGYRGRQPLQCEVPGTGLGLGIARDTMRSFGGDLEVVN 2215
M S +F++L + Q +LL + G +V+++ ++ +T G +F+P + YP+ +L + + + + P L+ +AA+ + + + + P +E ED + +P++Y +++G++ + GR R W+ER++ ++ +A +AI +LDQ++ W V+Q E R ++ LHQ +NP+TA+RTFGKLL KRL D NR++A I+ +SDRL ++L D V+ L ++ + +P + V + SV K + LL P E+VT +++ + +AQA A+ER + + ++LP V + + L E LSN+++NALK+ G ++ ++A G I + DNGPGI AEDL ++ +R YRG Q Q E+PGTGLG+ IA+ + G++EV +
Sbjct: 3 MSASSDFIALCREQISLLTQGL-GASLIVVYLTQDFVDTPRGEAQFIPVLVYPETAVLRQGDQLNQVMVNQQTQFGHVLALPNQGGKLLTAGSAASESSEKSGSTNTAQPH-LESEDIFTGNQIVSPLIYEGMMMGLLVI------------GRDDR------------------------------------AWNEREENEIQAIAKILAIACILDQRRAWLQQQLHQQQVLQEEQ-RDLLDNLLHQFRNPLTAIRTFGKLLFKRLRPADQ-NRDVATSIVRESDRLQELLQQFDQVIDLTSS-------------------DLTAIPLPESKVV--------------------------------------VEASVEKDAKPPLLLPGTG-----------EDVTDCYLTDLLLPLLISAQAIAQERNLELIADIPENLPLVKANIKALREVLSNIIDNALKYTPAG-----------GSIWIQAGQKKANFQG------IAINDNGPGIPAEDLQHLGERRYRGVQ-AQTEIPGTGLGIAIAKQLIAQMHGEIEVFS 425 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig82.38.7 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
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The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig82.38.7 >prot_P-littoralis_Contig82.38.7 ID=prot_P-littoralis_Contig82.38.7|Name=mRNA_P-littoralis_Contig82.38.7|organism=Pylaiella littoralis U1_48|type=polypeptide|length=752bp MRRRRPGHLPSDVGEVVVLTQLLVFVVISGGGVCLLQQHQPRYRDRSFCMback to top mRNA from alignment at P-littoralis_Contig82:231762..239419+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig82.38.7 ID=mRNA_P-littoralis_Contig82.38.7|Name=mRNA_P-littoralis_Contig82.38.7|organism=Pylaiella littoralis U1_48|type=mRNA|length=7658bp|location=Sequence derived from alignment at P-littoralis_Contig82:231762..239419+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig82:231762..239419+ >mRNA_P-littoralis_Contig82.38.7 ID=mRNA_P-littoralis_Contig82.38.7|Name=mRNA_P-littoralis_Contig82.38.7|organism=Pylaiella littoralis U1_48|type=CDS|length=2256bp|location=Sequence derived from alignment at P-littoralis_Contig82:231762..239419+ (Pylaiella littoralis U1_48)back to top |