prot_P-littoralis_Contig82.24.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig82.24.1
Unique Nameprot_P-littoralis_Contig82.24.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length160
Homology
BLAST of mRNA_P-littoralis_Contig82.24.1 vs. uniprot
Match: D7G9E0_ECTSI (PS II complex 12 kDa extrinsic protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G9E0_ECTSI)

HSP 1 Score: 267 bits (682), Expect = 1.090e-89
Identity = 143/159 (89.94%), Postives = 146/159 (91.82%), Query Frame = 0
Query:    1 MKFTSTVAVLACVGSAQAFVPSALPMARMSTSTKMSAQDSPASRGDFLKSAVGAAALLGLAAPVLAEVDNPVVPFLGGGDKIDVNNANVRAYIKLPGMYPSAAGKIVSNGPYSSVSEIYNIKGLSNEEKAAIKKHESRFITMDPQAMYTIDRINNGLYR 159
            MKFT TVAVLACVGSA AFVP ALP ARMS  T   + +SPASRGDFLKSA GAAALLGLAAP LAEVDNPVVPFLGGGDKIDVNNANVRAYIKL GMYPSAAGKIVSNGPYSSVSEIY+IKGLSNEEKAAIKKHESRFITMDPQAMYTIDRINNGLYR
Sbjct:    1 MKFT-TVAVLACVGSASAFVPHALPAARMSARTTTMSAESPASRGDFLKSAAGAAALLGLAAPALAEVDNPVVPFLGGGDKIDVNNANVRAYIKLQGMYPSAAGKIVSNGPYSSVSEIYSIKGLSNEEKAAIKKHESRFITMDPQAMYTIDRINNGLYR 158          
BLAST of mRNA_P-littoralis_Contig82.24.1 vs. uniprot
Match: A0A836CCI8_9STRA (PS II complex 12 kDa extrinsic protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CCI8_9STRA)

HSP 1 Score: 187 bits (474), Expect = 4.650e-58
Identity = 102/161 (63.35%), Postives = 126/161 (78.26%), Query Frame = 0
Query:    1 MKFTSTVAVLACVGSAQAFV-PSALPMARMSTSTKMSAQDSPASRGDFLKSAVGAAAL-LGLAAPVLAEVDNPVVPFLGGGDKIDVNNANVRAYIKLPGMYPSAAGKIVSNGPYSSVSEIYNIKGLSNEEKAAIKKHESRFITMDPQAMYTIDRINNGLYR 159
            MK T  + + A  G AQAFV PSA      ST   M+AQ  P  R  FLKSA  AA + + +AAP LAE+DNPVVPFLGGGDK+D+NNANVRAYIK+PGMYP+ AGK+VSNGPY++V+++YNIKGLS +EK+ +KK+ESRF+T++PQ MY IDRINNGLYR
Sbjct:    1 MKVTGAIVLAAACG-AQAFVAPSA---GVRSTQLSMTAQ--PVDRMAFLKSAATAAVVAVSVAAPALAEIDNPVVPFLGGGDKVDLNNANVRAYIKMPGMYPTVAGKVVSNGPYATVADVYNIKGLSEKEKSVLKKYESRFVTLEPQVMYGIDRINNGLYR 155          
BLAST of mRNA_P-littoralis_Contig82.24.1 vs. uniprot
Match: F0YKI8_AURAN (PS II complex 12 kDa extrinsic protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YKI8_AURAN)

HSP 1 Score: 157 bits (397), Expect = 1.330e-46
Identity = 75/116 (64.66%), Postives = 89/116 (76.72%), Query Frame = 0
Query:   44 RGDFLKSAVGAAALLGLAAPVLAEVDNPVVPFLGGGDKIDVNNANVRAYIKLPGMYPSAAGKIVSNGPYSSVSEIYNIKGLSNEEKAAIKKHESRFITMDPQAMYTIDRINNGLYR 159
            R +FL    GA     +AAP LA+ D   +P+LGG  KID+NNAN+R Y KLPGMYP AAGKI SNGPY SVS++YNIKGL + EKAAIKK+ESRFIT++P  MY IDR+NNGLYR
Sbjct:   22 RRNFLGKVAGAVTGASVAAPALADTDYAGLPYLGGSSKIDINNANIRVYAKLPGMYPGAAGKIASNGPYKSVSDVYNIKGLKDAEKAAIKKYESRFITLEPAPMYVIDRMNNGLYR 137          
BLAST of mRNA_P-littoralis_Contig82.24.1 vs. uniprot
Match: A0A6U4G1G5_9STRA (PS II complex 12 kDa extrinsic protein n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A6U4G1G5_9STRA)

HSP 1 Score: 150 bits (380), Expect = 7.560e-44
Identity = 82/151 (54.30%), Postives = 103/151 (68.21%), Query Frame = 0
Query:   10 LACVGSAQAFVPSALPMARMSTSTKMSAQDSPASRGDFLKSAVGAAAL-LGLAAPVLAEVDNPVVPFLGGGDKIDVNNANVRAYIKLPGMYPSAAGKIVSNGPYSSVSEIYNIKGLSNEEKAAIKKHESRFITMDPQAMYTIDRINNGLYR 159
            LA V +A AFVP            + +A ++ A R +F   A GAAA+    AAP  A VD   + +LGG   +D+NNANVR Y+K+PGMYP+AAGKIVSNGPY SVS++YNI GL++ EK AIKK+ESRF+ + P A Y IDRINNGLYR
Sbjct:    7 LATVATAAAFVP-------QQAGPQTTALNAEAGRREFFGKAAGAAAVAFAAAAPANAVVDYENIAYLGGSSTVDINNANVRVYLKMPGMYPAAAGKIVSNGPYKSVSDVYNIPGLTSAEKDAIKKYESRFVALKPSADYVIDRINNGLYR 150          
BLAST of mRNA_P-littoralis_Contig82.24.1 vs. uniprot
Match: K0TEZ3_THAOC (PS II complex 12 kDa extrinsic protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0TEZ3_THAOC)

HSP 1 Score: 145 bits (366), Expect = 9.740e-42
Identity = 83/157 (52.87%), Postives = 106/157 (67.52%), Query Frame = 0
Query:    6 TVAVLACVGSAQAFVPSALPMARMSTSTKMSAQDSPASRGDFLKSAVGAAALLGLAA---PVLAEVDNPVVPFLGGGDKIDVNNANVRAYIKLPGMYPSAAGKIVSNGPYSSVSEIYNIKGLSNEEKAAIKKHESRFITMDPQAMYTIDRINNGLYR 159
            T  +   + +A AF P+A P A+    T ++A+   A R  FL    GAAA  G AA      A VD   V +LGGG  +DVNNANVRAY++LPGMYPSAAGKIV++GPY SV+++YNI GL++ EK  IKK+ES+F+  DP A Y IDR+NNGLYR
Sbjct:    3 TAIIATLISTAAAFAPNAQPAAQ----TALNAE--AADRRSFL----GAAAAFGAAAIPAAASARVDYENVAYLGGGSTVDVNNANVRAYLRLPGMYPSAAGKIVTHGPYKSVADVYNIPGLTSAEKEVIKKYESKFVAKDPAAEYVIDRVNNGLYR 149          
BLAST of mRNA_P-littoralis_Contig82.24.1 vs. uniprot
Match: A0A7S1XZL8_9STRA (PS II complex 12 kDa extrinsic protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XZL8_9STRA)

HSP 1 Score: 145 bits (366), Expect = 1.100e-41
Identity = 69/102 (67.65%), Postives = 84/102 (82.35%), Query Frame = 0
Query:   60 LAAP--VLAEVDNPVVPFLGGGDKIDVNNANVRAYIKLPGMYPSAAGKIVSNGPYSSVSEIYNIKGLSNEEKAAIKKHESRFITMDPQAMYTIDRINNGLYR 159
            LAAP   +A+VD   +P+LGG +KID+NNANVR Y KLPGMYP+AA KI SNGPY SVS++Y+IKGLS +EK+ IKK+ESR IT++P AMY IDR NNGLYR
Sbjct:   52 LAAPFAAMADVDYAGLPYLGGSEKIDINNANVRVYAKLPGMYPNAAAKITSNGPYKSVSDVYSIKGLSEKEKSVIKKYESRLITLEPSAMYVIDRTNNGLYR 153          
BLAST of mRNA_P-littoralis_Contig82.24.1 vs. uniprot
Match: A0A7S3L326_9STRA (PS II complex 12 kDa extrinsic protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3L326_9STRA)

HSP 1 Score: 141 bits (356), Expect = 3.010e-40
Identity = 71/118 (60.17%), Postives = 88/118 (74.58%), Query Frame = 0
Query:   42 ASRGDFLKSAVGAAALLGLAAPVLAEVDNPVVPFLGGGDKIDVNNANVRAYIKLPGMYPSAAGKIVSNGPYSSVSEIYNIKGLSNEEKAAIKKHESRFITMDPQAMYTIDRINNGLYR 159
            A R +FL +AV AAA L +    LA  D   + +LGG D ID+NNANVR Y+KLPGMYPSAAGKI +NGPY+SV +IYNI GL+++EK  +KK+ES+F  + P A Y IDRINNGLYR
Sbjct:   30 ADRREFLSAAVVAAAGLAVPGSALAVRDYENLAYLGGSDTIDINNANVRVYLKLPGMYPSAAGKIAANGPYNSVGDIYNIPGLTSKEKEVMKKYESKFTALKPSADYVIDRINNGLYR 147          
BLAST of mRNA_P-littoralis_Contig82.24.1 vs. uniprot
Match: A0A7S2GXA3_9STRA (PS II complex 12 kDa extrinsic protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2GXA3_9STRA)

HSP 1 Score: 141 bits (355), Expect = 4.670e-40
Identity = 76/143 (53.15%), Postives = 97/143 (67.83%), Query Frame = 0
Query:   18 AFVPSALPMARMSTSTKMSAQDSPASRGDFLKSAVGAA-ALLGLAAPVLAEVDNPVVPFLGGGDKIDVNNANVRAYIKLPGMYPSAAGKIVSNGPYSSVSEIYNIKGLSNEEKAAIKKHESRFITMDPQAMYTIDRINNGLYR 159
            A V +A       T  + +A ++ A R +F  SA  AA    G+AAP  A VD   + +LGG   +D+NNANVR Y+K+PGMYP+ AGKIVSNGPY+SVS++YNIKGL++ EK  +KK+ESRF    P A Y IDRINNGLYR
Sbjct:    8 ALVSAAAAFTAPQTVQQSTALNAEAGRREFFGSAAAAAIGAFGVAAPASAVVDYENIGYLGGSSIVDLNNANVRVYLKMPGMYPTVAGKIVSNGPYASVSDVYNIKGLTSGEKEILKKYESRFTAKAPSADYVIDRINNGLYR 150          
BLAST of mRNA_P-littoralis_Contig82.24.1 vs. uniprot
Match: A0A7S4MT81_9STRA (PS II complex 12 kDa extrinsic protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4MT81_9STRA)

HSP 1 Score: 139 bits (351), Expect = 1.940e-39
Identity = 85/161 (52.80%), Postives = 105/161 (65.22%), Query Frame = 0
Query:    1 MKFTSTVAVLACVGSAQAFVPSALPMARMSTSTKMSAQDSPASRGDFLKSA--VGAAALLGLAAPVLAEVDNPVVPFLGGGDKIDVNNANVRAYIKLPGMYPSAAGKIVSNGPYSSVSEIYNIKGLSNEEKAAIKKHESRFITMDPQAMYTIDRINNGLYR 159
            MK     + LAC   A AF PS      +  +T ++A+   ASR +FL  A   GAA + G AAP  A  D   V FLGG   +DVNNANVR Y+K+PGMYP+AAGKI +NGPY SV++IYNI GL+ +EK  +KK+ESRF  + P A Y IDRINNGLYR
Sbjct:    1 MKLAVLASTLAC---AAAFAPS---QNGVPATTALNAE---ASRKEFLAGAFATGAAVVAG-AAPAYAIRDYDNVAFLGGSQTVDVNNANVRVYLKMPGMYPAAAGKIAANGPYKSVADIYNISGLTAKEKEIMKKYESRFTALPPSADYVIDRINNGLYR 151          
BLAST of mRNA_P-littoralis_Contig82.24.1 vs. uniprot
Match: A0A7S1Z9N8_TRICV (PS II complex 12 kDa extrinsic protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1Z9N8_TRICV)

HSP 1 Score: 139 bits (349), Expect = 3.790e-39
Identity = 83/155 (53.55%), Postives = 109/155 (70.32%), Query Frame = 0
Query:    8 AVLACVGS-AQAFVPSALPMARMSTSTKMSAQDSPASRGDFLKSAV--GAAALLGLAAPVLAEVDNPVVPFLGGGDKIDVNNANVRAYIKLPGMYPSAAGKIVSNGPYSSVSEIYNIKGLSNEEKAAIKKHESRFITMDPQAMYTIDRINNGLYR 159
            AVLA V + A AF P+  P    ++ST ++A+   ASR DFL  A+  G AA+ G AAP  A  D   + FLGG   +D+NNANVR Y+K+PGMYP+AAGKIV+NGPY +VS+IY+I GL+  EK  +KK+ESRF+ + P A + IDR+NNGLYR
Sbjct:    4 AVLASVVAVAAAFAPNQAP----ASSTALNAE---ASRKDFLAGAMAAGVAAVAG-AAPANAVRDYENIGFLGGSSTVDINNANVRVYLKMPGMYPAAAGKIVTNGPYKAVSDIYSIPGLTAGEKEVMKKYESRFVALPPSADFVIDRVNNGLYR 150          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig82.24.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G9E0_ECTSI1.090e-8989.94PS II complex 12 kDa extrinsic protein n=2 Tax=Ect... [more]
A0A836CCI8_9STRA4.650e-5863.35PS II complex 12 kDa extrinsic protein n=1 Tax=Tri... [more]
F0YKI8_AURAN1.330e-4664.66PS II complex 12 kDa extrinsic protein n=1 Tax=Aur... [more]
A0A6U4G1G5_9STRA7.560e-4454.30PS II complex 12 kDa extrinsic protein n=1 Tax=Min... [more]
K0TEZ3_THAOC9.740e-4252.87PS II complex 12 kDa extrinsic protein n=1 Tax=Tha... [more]
A0A7S1XZL8_9STRA1.100e-4167.65PS II complex 12 kDa extrinsic protein n=1 Tax=Pha... [more]
A0A7S3L326_9STRA3.010e-4060.17PS II complex 12 kDa extrinsic protein n=1 Tax=Amp... [more]
A0A7S2GXA3_9STRA4.670e-4053.15PS II complex 12 kDa extrinsic protein n=1 Tax=Hel... [more]
A0A7S4MT81_9STRA1.940e-3952.80PS II complex 12 kDa extrinsic protein n=1 Tax=Odo... [more]
A0A7S1Z9N8_TRICV3.790e-3953.55PS II complex 12 kDa extrinsic protein n=1 Tax=Tri... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.150.320Photosystem II 12 kDa extrinsic proteincoord: 66..149
e-value: 6.5E-26
score: 91.6
NoneNo IPR availableSUPERFAMILY81585PsbU/PolX domain-likecoord: 69..159
IPR010527Photosystem II PsbU, oxygen evolving complexPFAMPF06514PsbUcoord: 79..158
e-value: 2.4E-28
score: 98.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig82contigP-littoralis_Contig82:145366..150176 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig82.24.1mRNA_P-littoralis_Contig82.24.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig82 145366..151588 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig82.24.1 ID=prot_P-littoralis_Contig82.24.1|Name=mRNA_P-littoralis_Contig82.24.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=160bp
MKFTSTVAVLACVGSAQAFVPSALPMARMSTSTKMSAQDSPASRGDFLKS
AVGAAALLGLAAPVLAEVDNPVVPFLGGGDKIDVNNANVRAYIKLPGMYP
SAAGKIVSNGPYSSVSEIYNIKGLSNEEKAAIKKHESRFITMDPQAMYTI
DRINNGLYR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR010527PSII_PsbU