mRNA_P-littoralis_Contig12.111.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig12.111.1
Unique NamemRNA_P-littoralis_Contig12.111.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig12.111.1 vs. uniprot
Match: D7G826_ECTSI (A_deaminase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G826_ECTSI)

HSP 1 Score: 295 bits (755), Expect = 3.980e-96
Identity = 168/247 (68.02%), Postives = 182/247 (73.68%), Query Frame = 1
Query:   13 EALQDMRSNNVRYAELRTTPAP----TSGRD---EPTRLHRKHGASSQESLD---LGEGG---------SELLPAGRLIPRLLLGVDRGKSTEEAMEVAKLARELRSSEEWKLFVLGVDFSGNPTKDHSKLSGPAFELARSSGLKVTVHCGEVSDDADVLSVIAFRPERVGHAVVLGEEVRQALLSS-PQIPIEVCPTSNLLTLALSHHGEHPTVRGWIEAGYPFSVNTDDSGVFDTDLPTEFAHLA 693
            EALQDM+ +NVRYAELRTTP P    TS RD      ++ ++  AS         LG  G          E L AG L PRLLL VDR KS EEAMEVAKLA ELR  EEW+ +VLG+DFSGNPTK   K    AFE ARS+GLKVTVHCGEV +D D L VIAFRPER+GHAVVLGEEVRQ LLS  P+IPIEVCPTSNLLTLALSHHGEHPTV+GWIEAGYPF VNTDDSGVFDTDL TEFAHLA
Sbjct:   97 EALQDMQRDNVRYAELRTTPRPLADGTSRRDYIENVLQVFQEFEASQATKAIPSLLGNTGRIPESGNLTDESLVAGTLTPRLLLSVDRTKSVEEAMEVAKLAVELRGEEEWRPYVLGMDFSGNPTKGSFKEFRLAFESARSNGLKVTVHCGEVPNDTDFLEVIAFRPERLGHAVVLGEEVRQMLLSLVPRIPIEVCPTSNLLTLALSHHGEHPTVQGWIEAGYPFGVNTDDSGVFDTDLATEFAHLA 343          
BLAST of mRNA_P-littoralis_Contig12.111.1 vs. uniprot
Match: A0A835YU63_9STRA (A_deaminase domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YU63_9STRA)

HSP 1 Score: 170 bits (431), Expect = 1.410e-47
Identity = 102/247 (41.30%), Postives = 144/247 (58.30%), Query Frame = 1
Query:    4 VAHEALQDMRSNNVRYAELRTTPAPTSGRDEPT---------RLHRKHGASSQE----SLDLGEGGSEL---LPAGR-LIPRLLLGVDRGKSTEEAMEVAKLARELRSSEEWKLFVLGVDFSGNPTKDHSKLSGPAFELARSSGLKVTVHCGEVSDDADVLSVIAFRPERVGHAVVLGEEVRQALLSSPQIPIEVCPTSNLLTLALSHHGEHPTVRGWIEAGYPFSVNTDDSGVFDTDLPTEFAHLA 693
            +A EAL D  ++ V YAELRTTP P   RD  T          +  +  A +Q     S D      +L   LP    LIPRLLL VDRGKS + A EV  LA +L    ++  +++G+D SGNP K   +      + AR++GLKV+VHC EV +  D  +++ F P+R+GHA+ L  +    +L + ++P+EVCPTSN++TL L+ H EHPT   W+   +P S+NTDD+GVF T L  E+A +A
Sbjct:   82 IAREALADFAADGVVYAELRTTPRPL--RDGTTLEGYARQLLEVFAECDAEAQVLAALSADTCRNSGDLTGALPCEHGLIPRLLLSVDRGKSVDAAWEVVNLAVDLLKDAQYVKYLVGIDLSGNPAKGRFEDFAGPLQHARAAGLKVSVHCAEVYNPPDTQAILDFSPDRLGHALHLTSDALDRVLRN-RVPVEVCPTSNVITLGLNGHHEHPTAATWLAHEHPVSINTDDAGVFSTCLSREYASVA 325          
BLAST of mRNA_P-littoralis_Contig12.111.1 vs. uniprot
Match: R1CZ73_EMIHU (A_deaminase domain-containing protein n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=R1CZ73_EMIHU)

HSP 1 Score: 165 bits (418), Expect = 4.740e-46
Identity = 98/232 (42.24%), Postives = 132/232 (56.90%), Query Frame = 1
Query:    4 VAHEALQDMRSNNVRYAELRTTPAPTSGRDEPTRLHRKHGASSQESLDLGEGGSELLPAGRLIPRLLLGVDRGKSTEEAMEVAKLARELRSSEEWKL--FVLGVDFSGNPTKDHSKLSGPAFELARSSGLKVTVHCGEVSDDADVLSVIAFRPERVGHAVVLGEEVRQALLSSPQIPIEVCPTSNLLTLALSHHGEHPTVRGWIEAGYPFSVNTDDSGVFDTDLPTEFAHLA 693
            +A E L D  ++NV+Y ELRTTP      D    +    G  ++   D  + G   L    +  RLLL +DR    ++AME  +LA  LR+        +++G+DFSGNPT+       PAFE AR +GLKV  H  EV   AD  S++ FRPER+GHA++L      +L +SP IPIE+CPTSNL TL L    +HPT+  W+  GYP S++TDDS VF T    E A +A
Sbjct:   72 IAWEVLSDFAADNVKYLELRTTPRVLDDADLEGYVRALLGVCAR--FDTHQQGHPELAVWPMTTRLLLSIDRTGGLDKAMETVELAARLRAEPPSGADKYIVGLDFSGNPTRGTFADYVPAFEAAREAGLKVAAHAAEVDHPADNASILRFRPERLGHALLLSASDVASLRASP-IPIELCPTSNLKTLKLRSMRDHPTMGVWLAEGYPVSISTDDSSVFGTSSSKELALVA 300          
BLAST of mRNA_P-littoralis_Contig12.111.1 vs. uniprot
Match: A0A0M0J7E7_9EUKA (Adenosine deaminase n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0J7E7_9EUKA)

HSP 1 Score: 157 bits (396), Expect = 1.050e-42
Identity = 98/231 (42.42%), Postives = 130/231 (56.28%), Query Frame = 1
Query:    4 VAHEALQDMRSNNVRYAELRTTPAPTSGRDEPTRLHRKHG-ASSQESLDLGEGGSELLPAGRLIPRLLLGVDRGKSTEEAMEVAKLARELRSSEEWKLFVLGVDFSGNPTKDHSKLSGPAFELARSSGLKVTVHCGEVSDDADVLSVIAFRPERVGHAVVLGEEVRQALLSSPQIPIEVCPTSNLLTLALSHHGEHPTVRGWIEAGYPFSVNTDDSGVFDTDLPTEFAHLA 693
            +  E L D  ++ V+Y ELRTTP   +  D    +       +S E+  + +G S  +       RLLL VDR   T +AM   +LA  LR+       ++GVDFSGNPT+   +    AFE AR +GL+V VH GEV+   D  +VI FRPER+GHA++L     + L   P IPIE+CPTSNL TL L+    HPT+  W+  GYP S++TDDS VFDT    E A  A
Sbjct:   85 ITREVLSDFAADGVKYLELRTTPRTLADADVEGYVRALLAEVASFEAEQVAQGISWPMTV-----RLLLSVDRSGDTAKAMVTVQLATRLRAE---LGCIVGVDFSGNPTRSSFEHFREAFEAARLAGLRVAVHVGEVNAPEDTAAVIDFRPERLGHALLLSTHDLKRLRERP-IPIELCPTSNLKTLQLNELESHPTLTTWLAEGYPVSISTDDSTVFDTTSSRELALAA 306          
BLAST of mRNA_P-littoralis_Contig12.111.1 vs. uniprot
Match: A0A7S0LGC0_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0LGC0_9EUKA)

HSP 1 Score: 152 bits (384), Expect = 1.110e-40
Identity = 95/232 (40.95%), Postives = 132/232 (56.90%), Query Frame = 1
Query:    4 VAHEALQDMRSNNVRYAELRTTPAPTSGRDEPTRLHRKHGASSQESLDLGEGGSELLPAGRLIP---RLLLGVDRGKSTEEAMEVAKLARELRSSEEWK---LFVLGVDFSGNPTKDHSKLSGPAFELARSSGLKVTVHCGEVS-DDADVLSVIAFRPERVGHAVVLGEEVRQALLSSPQIPIEVCPTSNLLTLALSHHGEHPTVRGWIEAGYPFSVNTDDSGVFDTDLPTE 678
            + HE L D  ++NV+Y ELR+TP         T +    GA      +  +     + AG + P   RLLL +DR +S  +AME+ +LA  L +  + +    +++GVDFSGNPTK       PA   AR   L++ +H  E+   DA++  +IAF PER+GHA+ L    +QAL+   +IPIE+CPTSN+ TL L     HPT+R W EA YP S+NTDDSGVF T    E
Sbjct:  103 ITHEVLHDFAADNVKYLELRSTPRSLDDACPETYVRTVLGAF--RDFECAQ-----IKAGVVWPMSIRLLLSIDRSRSPTDAMEMVQLAVRLAAEGDEQGVGQYIVGVDFSGNPTKGSFGAFIPALTEARRQRLRIALHGAEIEGSDAEMNEMIAFGPERLGHALHLTPVHKQALMER-RIPIEICPTSNMKTLRLRSLTWHPTLRSWQEAAYPISINTDDSGVFSTSASQE 326          
BLAST of mRNA_P-littoralis_Contig12.111.1 vs. uniprot
Match: A0A7S2RFA9_9STRA (Hypothetical protein n=2 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2RFA9_9STRA)

HSP 1 Score: 147 bits (370), Expect = 4.920e-39
Identity = 85/236 (36.02%), Postives = 132/236 (55.93%), Query Frame = 1
Query:    4 VAHEALQDMRSNNVRYAELRTTPAPT---SGRDEPTRLHRK-HGASSQESLDLGEGGSELLPAGRLIPRLLLGVDRGKSTEEAMEVAKLARELRSSEEWKLFVLGVDFSGNPTKDHSKLSGPAFELARSSGLKVTVHCGEVSDDADVLSVIAFRPERVGHAVVLGEEVRQALL--SSPQIPIEVCPTSNLLTLALSHHGEHPTVRGWIEAGYPFSVNTDDSGVFDTDLPTEFAHLA 693
            +A + ++D   +NV Y ELRTTP  T   S +D  T +        +  SLD+             + R ++ ++R    E+A E+ +L  +  +  + + F++G+DFSGNP K H     P  E AR +GLK+T+HCGEV D  +V ++  F+PER+GHA+ + ++++Q+L      +  IE CPTSN  TL L+H   HP +  WI +  P  + TDDSG+F+T L  EF  +A
Sbjct:   80 LARDVIRDFARDNVVYLELRTTPRQTEFLSRQDYLTTIIEVIRECEADASLDI-------------MVRFVVSINRANGVEQATEIVELVLKTLAQNQ-ECFIVGLDFSGNPLKGHFGDFVPVLEAARLAGLKITIHCGEVEDPDEVFAIAQFKPERLGHALCIPDDLKQSLFFHGDNRSAIECCPTSNCKTLELTHIRGHPHLENWITSDCPVVLCTDDSGIFNTTLSKEFYIVA 301          
BLAST of mRNA_P-littoralis_Contig12.111.1 vs. uniprot
Match: B8CD03_THAPS (Adenosine deaminase n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CD03_THAPS)

HSP 1 Score: 144 bits (362), Expect = 2.750e-37
Identity = 81/192 (42.19%), Postives = 117/192 (60.94%), Query Frame = 1
Query:  187 LIPRLLLGVDRGKSTEEAMEVAKLAREL--RSSEEWKLFVLGVDFSGNPTKDHSKLSGPAFELARSSGLKVTVHCGEV------SDDA------DVLSVIAFRPERVGHAVVLGEEVRQALLSSPQIPIEVCPTSNLLTLALS-HHG--------EHPTVRGWIEAGYPFSVNTDDSGVFDTDLPTEFAHLA 693
            LIPRL++ VDR  + E+A E   LA E+  + S     +++GV+  GNPT++  +   P F++AR  GL V +HCGEV      SD A      + +SVI FRP+R+GHA++L + +   L+  P IPIE CPTSN++TL L+ HHG         HP +  W+E  YP S+NTDD+G+F T+L  E+  +A
Sbjct:  170 LIPRLIISVDRSGTYEQAEENINLAIEMVTQQSNHIGKYLVGVELGGNPTRNDFRTFEPLFQMARDRGLPVAIHCGEVPSSGTSSDSALKKAYDEAVSVIQFRPDRLGHALLLPDYLIDRLMQQP-IPIECCPTSNVMTLQLALHHGGSLTDGMKRHPQLGKWLEKNYPISINTDDAGIFTTNLTKEYLLVA 360          
BLAST of mRNA_P-littoralis_Contig12.111.1 vs. uniprot
Match: A0A7S4WC74_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4WC74_9STRA)

HSP 1 Score: 143 bits (360), Expect = 1.920e-36
Identity = 81/192 (42.19%), Postives = 114/192 (59.38%), Query Frame = 1
Query:  187 LIPRLLLGVDRGKSTEEAMEVAKLAREL-RSSEEWKLFVLGVDFSGNPTKDHSKLSGPAFELARSSGLKVTVHCGEV-------SDDA-------DVLSVIAFRPERVGHAVVLGEEVRQALLSSPQIPIEVCPTSNLLTLALSHHGE---------HPTVRGWIEAGYPFSVNTDDSGVFDTDLPTEFAHL 690
            L+PR +L VDR  + EEA++   LA E+ R++ E   +++GV+  GNPTK+      PAF LAR +G++V +HCGEV         DA       + + VI FRP+R+GH ++L E +   L + P IPIE CPTSN++TL L+ H E         HP +  W++  YP S+NTDDSGVF+T L  E   L
Sbjct:  250 LLPRYILSVDRSGTVEEALDTIHLAIEMFRTNNE---YIVGVEMGGNPTKNDFHNFEPAFRLAREAGMRVAIHCGEVPCGSSTNEQDASLKKAFDEAMRVIEFRPDRLGHGLLLPESITSILQNDP-IPIECCPTSNVMTLELAQHHEGSLIEGLRGHPQLSKWLKNQYPISINTDDSGVFNTTLTRELLLL 437          
BLAST of mRNA_P-littoralis_Contig12.111.1 vs. uniprot
Match: B7G5P7_PHATC (Adenosine deaminase n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7G5P7_PHATC)

HSP 1 Score: 139 bits (351), Expect = 1.100e-35
Identity = 85/265 (32.08%), Postives = 141/265 (53.21%), Query Frame = 1
Query:    4 VAHEALQDMRSNNVRYAELRTTPAPTSGRDEPTRLHRKHGASSQESLD-------LGEGGSE-------------LLPAGRL--IPRLLLGVDRGKSTEEAMEVAKLARELRSSEEWKLF-----VLGVDFSGNPTKDHSKLSGPAFELARSSGLKVTVHCGEVSDDADVLSVIAFRPERVGHAVVLGEEVRQALLSSPQIPIEVCPTSNLLTLALSH-------HG--EHPTVRGWIEAGYPFSVNTDDSGVFDTDLPTEFAHL 690
            +  EAL+D  +++V Y ELR+TP          RL R H     + +D       + EG  +             +L + RL  +   ++ +DR +S EEA +   +A ++   ++ +       ++G+D  GNPTK+  +     F+ AR +GLKVT+HCGE+    + ++++AFRP+R+GHA++L   + Q +L   +IP+E CPTSN++TL L+        HG  +HP +  W++  +P S+ TDD GVF T+   E   L
Sbjct:  106 ITQEALEDFAAHHVAYLELRSTPK---------RLLRSHQDDQSQKVDKQVYIETVLEGIRDFQSKEKERFSHDPVLSSSRLPIVCNFIVAIDRSQSLEEATDTVHIAIDMFQRQQSRPSNLSPSIVGIDLGGNPTKNDFRTFQTLFQKARQAGLKVTIHCGEIPSRDEAVAILAFRPDRLGHALLLPSSL-QKVLEDTKIPVETCPTSNVMTLELARSSNGNLVHGLSQHPCLAQWLQNNHPLSIGTDDPGVFHTNATKELVLL 360          
BLAST of mRNA_P-littoralis_Contig12.111.1 vs. uniprot
Match: A0A2J6MED1_LACSA (A_deaminase domain-containing protein n=1 Tax=Lactuca sativa TaxID=4236 RepID=A0A2J6MED1_LACSA)

HSP 1 Score: 137 bits (345), Expect = 2.930e-35
Identity = 88/239 (36.82%), Postives = 129/239 (53.97%), Query Frame = 1
Query:    4 VAHEALQDMRSNNVRYAELRTTPAPTSGRDEPTRLHRK-------HGASSQESLDLGEGGSELLPAG-----RLIPRLLLGVDRGKSTEEAMEVAKLARELRSSEEWKLFVLGVDFSGNPTKDHSKLSGPAFELARSSGLKVTVHCGEVSDDADVLSVIAFRPERVGHAVVLGEEVRQALLSSPQIPIEVCPTSNLLTLALSHHGEHPTVRGWIEAGYPFSVNTDDSGVFDTDLPTEFA 684
            +  E ++D  + NV Y ELRTTP     R++   + +K        G  S  +LD+     +          ++  RLLL +DR +STE AME   LA E+R      + V+G+D SGNPT        PA + AR  GL VT+HCGEV +  ++ S++ F P R+GHA    ++  + L SS +IP+E+C TSN+ T  +S    H     + +A +P  + TDDSGVF T+L TE+A
Sbjct:   77 ITKEVVEDFAAENVVYLELRTTPK----RNDSIGMSKKSYMEAVVEGLRSISNLDINLSSDDFDKCSSTNEKKIFVRLLLSIDRRESTESAMETVNLALEMRD-----VGVVGIDLSGNPTIGEWATFFPALKFAREQGLSVTLHCGEVPNSVEIQSMLDFLPGRIGHACCFQDQEWRKLKSS-KIPVEICLTSNIRTETISSIDVHHFAELY-KANHPIVLCTDDSGVFSTNLSTEYA 304          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig12.111.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G826_ECTSI3.980e-9668.02A_deaminase domain-containing protein n=2 Tax=Ecto... [more]
A0A835YU63_9STRA1.410e-4741.30A_deaminase domain-containing protein n=1 Tax=Trib... [more]
R1CZ73_EMIHU4.740e-4642.24A_deaminase domain-containing protein n=2 Tax=Emil... [more]
A0A0M0J7E7_9EUKA1.050e-4242.42Adenosine deaminase n=1 Tax=Chrysochromulina tobin... [more]
A0A7S0LGC0_9EUKA1.110e-4040.95Hypothetical protein (Fragment) n=1 Tax=Coccolithu... [more]
A0A7S2RFA9_9STRA4.920e-3936.02Hypothetical protein n=2 Tax=labyrinthulid quahog ... [more]
B8CD03_THAPS2.750e-3742.19Adenosine deaminase n=1 Tax=Thalassiosira pseudona... [more]
A0A7S4WC74_9STRA1.920e-3642.19Hypothetical protein n=2 Tax=Ditylum brightwellii ... [more]
B7G5P7_PHATC1.100e-3532.08Adenosine deaminase n=1 Tax=Phaeodactylum tricornu... [more]
A0A2J6MED1_LACSA2.930e-3536.82A_deaminase domain-containing protein n=1 Tax=Lact... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig12contigP-littoralis_Contig12:495568..497031 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog2880.D7G826
Preferred nameADAL
PFAMsA_deaminase
Model size693
Max annot lvl2759|Eukaryota
KEGG rclassRC00477
KEGG koko:K01488,ko:K12191
KEGG ReactionR01560,R02556
KEGG Pathwayko00230,ko01100,ko04144,ko04217,ko05340,map00230,map01100,map04144,map04217,map05340
KEGG ModuleM00412
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0004000,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006152,GO:0006154,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009116,GO:0009119,GO:0009163,GO:0009164,GO:0009987,GO:0016787,GO:0016810,GO:0016814,GO:0017144,GO:0018130,GO:0019239,GO:0019438,GO:0019439,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0034656,GO:0042278,GO:0042451,GO:0042454,GO:0042455,GO:0042737,GO:0043094,GO:0043101,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044282,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046085,GO:0046102,GO:0046103,GO:0046128,GO:0046129,GO:0046130,GO:0046483,GO:0046700,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0072523,GO:1901135,GO:1901136,GO:1901137,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576,GO:1901657,GO:1901658,GO:1901659
Exons4
Evalue6.52e-97
EggNOG OGsCOG1816@1|root,KOG1097@2759|Eukaryota
EC3.5.4.4
Descriptionhypoxanthine salvage
Cds size693
COG categoryF
BRITEko00000,ko00001,ko00002,ko01000,ko04131,ko04147
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789509.2628255-CDS-P-littoralis_Contig12:495567..4956431680789509.2628255-CDS-P-littoralis_Contig12:495567..495643Pylaiella littoralis U1_48CDSP-littoralis_Contig12 495568..495643 -
1680789509.2742667-CDS-P-littoralis_Contig12:496013..4962771680789509.2742667-CDS-P-littoralis_Contig12:496013..496277Pylaiella littoralis U1_48CDSP-littoralis_Contig12 496014..496277 -
1680789509.2834525-CDS-P-littoralis_Contig12:496614..4968491680789509.2834525-CDS-P-littoralis_Contig12:496614..496849Pylaiella littoralis U1_48CDSP-littoralis_Contig12 496615..496849 -
1680789509.2935143-CDS-P-littoralis_Contig12:496913..4970311680789509.2935143-CDS-P-littoralis_Contig12:496913..497031Pylaiella littoralis U1_48CDSP-littoralis_Contig12 496914..497031 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig12.111.1prot_P-littoralis_Contig12.111.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig12 495568..497031 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig12.111.1

>prot_P-littoralis_Contig12.111.1 ID=prot_P-littoralis_Contig12.111.1|Name=mRNA_P-littoralis_Contig12.111.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=231bp
MVAHEALQDMRSNNVRYAELRTTPAPTSGRDEPTRLHRKHGASSQESLDL
GEGGSELLPAGRLIPRLLLGVDRGKSTEEAMEVAKLARELRSSEEWKLFV
LGVDFSGNPTKDHSKLSGPAFELARSSGLKVTVHCGEVSDDADVLSVIAF
RPERVGHAVVLGEEVRQALLSSPQIPIEVCPTSNLLTLALSHHGEHPTVR
GWIEAGYPFSVNTDDSGVFDTDLPTEFAHLA
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mRNA from alignment at P-littoralis_Contig12:495568..497031-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig12.111.1 ID=mRNA_P-littoralis_Contig12.111.1|Name=mRNA_P-littoralis_Contig12.111.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=1464bp|location=Sequence derived from alignment at P-littoralis_Contig12:495568..497031- (Pylaiella littoralis U1_48)
ATGGTCGCGCATGAAGCCCTGCAAGACATGCGGAGCAACAACGTTCGCTA CGCCGAGCTCCGAACCACCCCCGCGCCCACTAGCGGACGGGACGAGCCGA CGCGACTACATCGAAAACGTGCTCCAAGTTTTCCGAGACTTTGAAATCAA CCAGGCAGCCAGGGCACCCGATGTATCCAGAGATGGGGCCAGCTCTCAGG AATCTCTCGACCTCGGCGAGGGTGGGAGCGAACTGTTGCCGGCCGGGCGG CTGATCCCCCGGCTGCTGCTCGGCGTGGACAGAGGAAAGAGTACCGAAGA AGCCATGGAAGTTGCGAAGCTTGCCCGCGAGCTTCGTTCGAGCGAAGAAT GGAAGCTGTTCGTGCTCGGAGTGGACTTCAGCGGCAATCCCACCAAGGAT CATTCGAAGCTTTCAGGGTCAGATCAGAGGACAGGATCGTGGGAGGGGCG ACAGTCGCGCTGCGTACACAAACTCACTCATGCGTGTGCATACGCGCATG CACCAGATCGCTCGATCCTAGCCACGTCACACCTACCGTGAGCACCCTTA AGACCAGGGGCGCTCGGTCTCCTTTCGGCGAAACCGAAGAGTCTCAGGGA AGCGCCCGCTTTGTCTGAAAACACTTTGAAACTATACAGACTACCGCTGT ACTTTCTGGGCGCAAAGGTGGGTGCACTTGTCGACGCAATCCGAACGTCC CGCTGTACCCACCCGGTCCGGCCCGCCACCGCACGCTTCTCTCGGTCTGA GCAGGCCGGCTTTTGAGCTGGCTCGAAGCAGTGGATTAAAGGTGACGGTG CACTGCGGAGAGGTTTCTGACGACGCCGACGTTCTCTCGGTGATTGCCTT TCGCCCGGAGCGGGTGGGACACGCGGTGGTCTTGGGAGAAGAAGTCCGGC AGGCGCTGCTTTCGTCCCCACAAATTCCCATCGAGGTGTGTCCGACCTCA AACCTCCTCACCCTGGCGCTCTCTCATCACGGGGAACACCCTACAGTGCG AGGCTGGATTGAGGCAGGGTGAGTTTTATTTTGTTCTCACCTTCTTCATT TTTTGTGTAGAAGTTTTCAGCGAGGATGCACGCTCAGAAAAAAAGGGTTG TCAGTTCGAAGTACATGCCTACTCGGCGTGTTGCTTGGAGATGAGTCTTT CACCTTGTATTGGTTGATTTGTTTTTGAAGCCTTTGATATCGCGGCTATC CTTTACTACTGTGTCGTATAGTGAATATATGGCAACTGGTCCCCTCTCGC GTCGGAAAAGGGCCACGCTGAAGTGTTCATGCCAACAGCAGTACACGTCT GTGCCGCGCGTGTCCGGCAAAGCCTTGTTTTTGTTTTTGTTTGTTTTCCT GACCCTTCCCCTGCTGCGAACCTCCACTGTCCCGGCAGGTACCCGTTCAG CGTCAACACCGACGATTCCGGGGTGTTCGATACCGATCTGCCGACCGAAT TTGCACACCTCGCC
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Coding sequence (CDS) from alignment at P-littoralis_Contig12:495568..497031-

>mRNA_P-littoralis_Contig12.111.1 ID=mRNA_P-littoralis_Contig12.111.1|Name=mRNA_P-littoralis_Contig12.111.1|organism=Pylaiella littoralis U1_48|type=CDS|length=693bp|location=Sequence derived from alignment at P-littoralis_Contig12:495568..497031- (Pylaiella littoralis U1_48)
ATGGTCGCGCATGAAGCCCTGCAAGACATGCGGAGCAACAACGTTCGCTA
CGCCGAGCTCCGAACCACCCCCGCGCCCACTAGCGGACGGGACGAGCCGA
CGCGACTACATCGAAAACATGGGGCCAGCTCTCAGGAATCTCTCGACCTC
GGCGAGGGTGGGAGCGAACTGTTGCCGGCCGGGCGGCTGATCCCCCGGCT
GCTGCTCGGCGTGGACAGAGGAAAGAGTACCGAAGAAGCCATGGAAGTTG
CGAAGCTTGCCCGCGAGCTTCGTTCGAGCGAAGAATGGAAGCTGTTCGTG
CTCGGAGTGGACTTCAGCGGCAATCCCACCAAGGATCATTCGAAGCTTTC
AGGGCCGGCTTTTGAGCTGGCTCGAAGCAGTGGATTAAAGGTGACGGTGC
ACTGCGGAGAGGTTTCTGACGACGCCGACGTTCTCTCGGTGATTGCCTTT
CGCCCGGAGCGGGTGGGACACGCGGTGGTCTTGGGAGAAGAAGTCCGGCA
GGCGCTGCTTTCGTCCCCACAAATTCCCATCGAGGTGTGTCCGACCTCAA
ACCTCCTCACCCTGGCGCTCTCTCATCACGGGGAACACCCTACAGTGCGA
GGCTGGATTGAGGCAGGGTACCCGTTCAGCGTCAACACCGACGATTCCGG
GGTGTTCGATACCGATCTGCCGACCGAATTTGCACACCTCGCC
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