prot_P-littoralis_Contig82.4.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig82.4.1
Unique Nameprot_P-littoralis_Contig82.4.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length114
Homology
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BLAST of mRNA_P-littoralis_Contig82.4.1 vs. uniprot
Match: A0A6H5JZL6_9PHAE (RT_RNaseH domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZL6_9PHAE)

HSP 1 Score: 80.1 bits (196), Expect = 3.370e-16
Identity = 34/42 (80.95%), Postives = 37/42 (88.10%), Query Frame = 0 
Query:   73 RVSTERECMAILWAVDHFKPYLAGRAFRLVTDCSALTWLFRS 114
            R  TERECM +LW VDHFKPYLAGR F++VTDCSALTWLFRS
Sbjct:  162 RGPTERECMGVLWGVDHFKPYLAGRLFKVVTDCSALTWLFRS 203
[Close]
BLAST of mRNA_P-littoralis_Contig82.4.1 vs. uniprot
Match: A0A6H5JIH2_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIH2_9PHAE)

HSP 1 Score: 81.6 bits (200), Expect = 4.390e-16
Identity = 35/42 (83.33%), Postives = 38/42 (90.48%), Query Frame = 0 
Query:   73 RVSTERECMAILWAVDHFKPYLAGRAFRLVTDCSALTWLFRS 114
            R  TERECM +LWAVDHF+PYLAGR F+LVTDCSALTWLFRS
Sbjct:  228 RGHTERECMGVLWAVDHFRPYLAGRRFKLVTDCSALTWLFRS 269
[Close]
BLAST of mRNA_P-littoralis_Contig82.4.1 vs. uniprot
Match: A0A6H5JZD5_9PHAE (RT_RNaseH domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZD5_9PHAE)

HSP 1 Score: 81.6 bits (200), Expect = 6.850e-16
Identity = 35/42 (83.33%), Postives = 38/42 (90.48%), Query Frame = 0 
Query:   73 RVSTERECMAILWAVDHFKPYLAGRAFRLVTDCSALTWLFRS 114
            R  TERECM +LWAVDHF+PYLAGR F+LVTDCSALTWLFRS
Sbjct:  101 RGPTERECMGVLWAVDHFRPYLAGRRFKLVTDCSALTWLFRS 142
[Close]
BLAST of mRNA_P-littoralis_Contig82.4.1 vs. uniprot
Match: A0A6H5JB61_9PHAE (RT_RNaseH_2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JB61_9PHAE)

HSP 1 Score: 81.3 bits (199), Expect = 7.970e-16
Identity = 35/42 (83.33%), Postives = 37/42 (88.10%), Query Frame = 0 
Query:   73 RVSTERECMAILWAVDHFKPYLAGRAFRLVTDCSALTWLFRS 114
            R  TERECM +LW VDHFKPYLAGR FR+VTDCSALTWLFRS
Sbjct:  199 RGPTERECMGVLWGVDHFKPYLAGRQFRVVTDCSALTWLFRS 240
[Close]
BLAST of mRNA_P-littoralis_Contig82.4.1 vs. uniprot
Match: A0A6H5KIS6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIS6_9PHAE)

HSP 1 Score: 81.6 bits (200), Expect = 8.960e-16
Identity = 37/49 (75.51%), Postives = 43/49 (87.76%), Query Frame = 0 
Query:   66 VQSENRTRVSTERECMAILWAVDHFKPYLAGRAFRLVTDCSALTWLFRS 114
            +Q++ R R  TERECM +LWAVDHF+PYLAGR F+LVTDCSALTWLFRS
Sbjct:  354 LQTDAR-RGLTERECMGVLWAVDHFRPYLAGRRFKLVTDCSALTWLFRS 401
[Close]
BLAST of mRNA_P-littoralis_Contig82.4.1 vs. uniprot
Match: A0A6H5K9Z4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9Z4_9PHAE)

HSP 1 Score: 81.6 bits (200), Expect = 9.650e-16
Identity = 35/42 (83.33%), Postives = 38/42 (90.48%), Query Frame = 0 
Query:   73 RVSTERECMAILWAVDHFKPYLAGRAFRLVTDCSALTWLFRS 114
            R  TERECM +LWAVDHF+PYLAGR F+LVTDCSALTWLFRS
Sbjct:  399 RGPTERECMGVLWAVDHFRPYLAGRRFKLVTDCSALTWLFRS 440
[Close]
BLAST of mRNA_P-littoralis_Contig82.4.1 vs. uniprot
Match: A0A6H5KGF2_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGF2_9PHAE)

HSP 1 Score: 81.6 bits (200), Expect = 9.890e-16
Identity = 35/42 (83.33%), Postives = 38/42 (90.48%), Query Frame = 0 
Query:   73 RVSTERECMAILWAVDHFKPYLAGRAFRLVTDCSALTWLFRS 114
            R  TERECM +LWAVDHF+PYLAGR F+LVTDCSALTWLFRS
Sbjct:  375 RGPTERECMGVLWAVDHFRPYLAGRRFKLVTDCSALTWLFRS 416
[Close]
BLAST of mRNA_P-littoralis_Contig82.4.1 vs. uniprot
Match: A0A6H5JQV6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQV6_9PHAE)

HSP 1 Score: 81.6 bits (200), Expect = 9.950e-16
Identity = 35/42 (83.33%), Postives = 38/42 (90.48%), Query Frame = 0 
Query:   73 RVSTERECMAILWAVDHFKPYLAGRAFRLVTDCSALTWLFRS 114
            R  TERECM +LWAVDHF+PYLAGR F+LVTDCSALTWLFRS
Sbjct:  500 RGPTERECMGVLWAVDHFRPYLAGRRFKLVTDCSALTWLFRS 541
[Close]
BLAST of mRNA_P-littoralis_Contig82.4.1 vs. uniprot
Match: A0A6H5KFK7_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFK7_9PHAE)

HSP 1 Score: 81.6 bits (200), Expect = 1.030e-15
Identity = 35/42 (83.33%), Postives = 38/42 (90.48%), Query Frame = 0 
Query:   73 RVSTERECMAILWAVDHFKPYLAGRAFRLVTDCSALTWLFRS 114
            R  TERECM +LWAVDHF+PYLAGR F+LVTDCSALTWLFRS
Sbjct:  502 RGPTERECMGVLWAVDHFRPYLAGRRFKLVTDCSALTWLFRS 543
[Close]
BLAST of mRNA_P-littoralis_Contig82.4.1 vs. uniprot
Match: A0A6H5JZ05_9PHAE (RT_RNaseH_2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZ05_9PHAE)

HSP 1 Score: 78.2 bits (191), Expect = 1.040e-15
Identity = 33/40 (82.50%), Postives = 36/40 (90.00%), Query Frame = 0 
Query:   73 RVSTERECMAILWAVDHFKPYLAGRAFRLVTDCSALTWLF 112
            R  TERECM +LWAVDHF+PYLAGR F+LVTDCSALTWLF
Sbjct:  142 RGPTERECMGVLWAVDHFRPYLAGRRFKLVTDCSALTWLF 181
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig82.4.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JZL6_9PHAE3.370e-1680.95RT_RNaseH domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5JIH2_9PHAE4.390e-1683.33Reverse transcriptase domain-containing protein n=... [more]
A0A6H5JZD5_9PHAE6.850e-1683.33RT_RNaseH domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5JB61_9PHAE7.970e-1683.33RT_RNaseH_2 domain-containing protein n=1 Tax=Ecto... [more]
A0A6H5KIS6_9PHAE8.960e-1675.51Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K9Z4_9PHAE9.650e-1683.33Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KGF2_9PHAE9.890e-1683.33Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5JQV6_9PHAE9.950e-1683.33Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KFK7_9PHAE1.030e-1583.33Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5JZ05_9PHAE1.040e-1582.50RT_RNaseH_2 domain-containing protein n=1 Tax=Ecto... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR041373Reverse transcriptase, RNase H-like domainPFAMPF17917RT_RNaseHcoord: 71..113
e-value: 1.2E-10
score: 41.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..20
IPR043502DNA/RNA polymerase superfamilySUPERFAMILY56672DNA/RNA polymerasescoord: 73..113

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig82contigP-littoralis_Contig82:7823..11734 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig82.4.1mRNA_P-littoralis_Contig82.4.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig82 7823..11734 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig82.4.1 ID=prot_P-littoralis_Contig82.4.1|Name=mRNA_P-littoralis_Contig82.4.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=114bp
RLRRSVSAGPPRQNRTSCLGNEAGAARTGIERGISFSCSSSATLPAEHSA
LWRMLCVWSPHLLYGVQSENRTRVSTERECMAILWAVDHFKPYLAGRAFR
LVTDCSALTWLFRS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR041373RT_RNaseH
IPR043502DNA/RNA_pol_sf