mRNA_P-littoralis_Contig819.15.2 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig819.15.2 vs. uniprot
Match: D7G730_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G730_ECTSI) HSP 1 Score: 263 bits (671), Expect = 3.380e-77 Identity = 178/311 (57.23%), Postives = 200/311 (64.31%), Query Frame = 2
Query: 257 MAKQGNDSAAPAEAAAAADASKPVHVMDLLKQFDFLSIGLKGKIHCALTNRDLPLNSVAIQQHVNSKKLKKEREWYNADFSKYEPFIVAHKTHPKLLFCKLTHIELNRIPKQVEAHVNGKRYRNRKAEMDGLKQAQRQPLREGSEEESEKGKGEGGDGPGFWAPTGGAQVEDMDENDTSDXXXXXXXXXXXVKKVGQGAGAVGGSAPRRAKANDSKAGTRXXXXXXXXREGDKPKEALKGGCENDSDGRQENGASGGEGGAKGKKRKQKGSXXXXXXXXXXXXXXXXKKGESSPMSEDTPATRKSATKDAA 1189
MAKQG SA P E A D+SKPVHVMDL+KQFDFLSIGL GKIHCALTNRDLPLNS A+ QH+NSKKLKKEREWYNADFSKYEPF+VAHKT+PKLLFC LT IELNRIPK+VEAHVNGKRY NRKAEM+GLKQAQRQPL E SEEE ++ DG W PTGGA+ MDE+ SD XXXXXXXXXX APRR + S A + DK K +GG E+ G GAKG+ K+KG K + SP S+DTPA K+ +DAA
Sbjct: 1 MAKQGKGSA-PKEMPGADDSSKPVHVMDLIKQFDFLSIGLTGKIHCALTNRDLPLNSTAVHQHLNSKKLKKEREWYNADFSKYEPFVVAHKTNPKLLFCTLTRIELNRIPKEVEAHVNGKRYGNRKAEMEGLKQAQRQPLGEDSEEEDQEE-----DGAEIWVPTGGAEA--MDEDGESDQXXXXXXXXXXXXXXXXXXXXXXKRAPRREDKDQSAAREGRQKTSGKKGKADKTKRKAEGGQEDGGXXXXXXXXXXGGQGAKGQADKKKGCAKSKQRGGKGAAKLAAKSPKPSPRSDDTPAVSKTVVRDAA 303
BLAST of mRNA_P-littoralis_Contig819.15.2 vs. uniprot
Match: A0A6H5JNC3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNC3_9PHAE) HSP 1 Score: 257 bits (656), Expect = 4.970e-75 Identity = 134/174 (77.01%), Postives = 147/174 (84.48%), Query Frame = 2
Query: 257 MAKQGNDSAAPAEAAAAADASKPVHVMDLLKQFDFLSIGLKGKIHCALTNRDLPLNSVAIQQHVNSKKLKKEREWYNADFSKYEPFIVAHKTHPKLLFCKLTHIELNRIPKQVEAHVNGKRYRNRKAEMDGLKQAQRQPLREGSEEESEKGKGEGGDGPGFWAPTGGAQVEDMD 778
M+KQGN SA P E A D+SKPVHVMDL+KQFDFLSIGL+GKIHCALTNRDLPLNS A+ QH+NSKKLKKEREWYNADFSKYEPF+VAHKT+PKLLFC LT IELNRIPK+VEAHVNGKRYRNRKAEM+GLKQAQRQPL E +EEE E+ G FW PTGGA+ D D
Sbjct: 1 MSKQGNGSA-PNEMPVADDSSKPVHVMDLIKQFDFLSIGLRGKIHCALTNRDLPLNSAAVHQHLNSKKLKKEREWYNADFSKYEPFVVAHKTNPKLLFCTLTRIELNRIPKEVEAHVNGKRYRNRKAEMEGLKQAQRQPLGEDTEEEDEEEHG-----AEFWVPTGGAEAMDED 168
BLAST of mRNA_P-littoralis_Contig819.15.2 vs. uniprot
Match: A0A835YV33_9STRA (Surfeit locus protein 2-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YV33_9STRA) HSP 1 Score: 120 bits (302), Expect = 5.390e-28 Identity = 61/116 (52.59%), Postives = 81/116 (69.83%), Query Frame = 2
Query: 323 PVHVMDLLKQFDFLSIGLKGKIHCALTNRDLPLNSVAIQQHVNSKKLKKEREWYNADFSKYEPFIVAHKTHPKLLFCKLTHIELNRIPKQVEAHVNGKRYRNRKAEMDGLKQAQRQ 670
P V ++ Q DFLS+ GK HC +TN D+P A++ H+ SKK K+R+WY+ DFSKYEP IVA+K PKLLFCKLT LNRIP+++E HVNGKR++ AE + QA++Q
Sbjct: 34 PPEVQAIIDQHDFLSLNEHGKAHCNVTNLDIPARVDALKTHLASKKFIKQRDWYSYDFSKYEPHIVANKKDPKLLFCKLTMKPLNRIPEEIETHVNGKRFKRLVAEAEAA-QARKQ 148
BLAST of mRNA_P-littoralis_Contig819.15.2 vs. uniprot
Match: A0A7R9UEL5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UEL5_9STRA) HSP 1 Score: 101 bits (252), Expect = 3.350e-21 Identity = 54/136 (39.71%), Postives = 83/136 (61.03%), Query Frame = 2
Query: 377 KGKIHCALTNRDLPLNSVAIQQHVNSKKLKKEREWYNADFSKYEPFIVAHKTHPKLLFCKLTHIELNRIPKQVEAHVNGKRYRNRKAEMDGLKQAQRQPLREGSEEESEKGKGEGGDGPGFWAPTGGAQVEDMDEN 784
+ K+ C+LT ++P ++ A+Q ++ SK +K++EWY+ADFSKYEP++VAHK + LFC +T LNRIPK+V+ H GKR++ K E D ++ + + + E K KGE F+ P ED DE+
Sbjct: 39 RRKVVCSLTRHEMPPSAPAVQAYLRSKAFRKQKEWYSADFSKYEPYVVAHKKDGRKLFCNVTRKSLNRIPKEVQRHWEGKRFQRLKVEYDARQKKREEQEMIRRQREEAKAKGE------FYLP------EDFDES 162
BLAST of mRNA_P-littoralis_Contig819.15.2 vs. uniprot
Match: A0A024G4B4_9STRA (Uncharacterized protein n=2 Tax=Albugo candida TaxID=65357 RepID=A0A024G4B4_9STRA) HSP 1 Score: 96.7 bits (239), Expect = 8.210e-19 Identity = 47/99 (47.47%), Postives = 61/99 (61.62%), Query Frame = 2
Query: 326 VHVMDLLKQFDFLSIGLKGKIHCALTNRDLPLNSVAIQQHVNSKKLKKEREWYNADFSKYEPFIVAHKTHPKLLFCKLTHIELNRIPKQVEAHVNGKRY 622
V+ D L+ + S G + + C LT D+ I QH+ SK L K ++WYN DFSKY P I+ H+ PK L+C +T LNRIP+QVE HVNGKRY
Sbjct: 9 VNSTDFLRVIETQSNGTR--VQCTLTKHDMVPKEAVILQHLRSKALLKAKDWYNYDFSKYRPHIIPHRRKPKCLYCNVTQTTLNRIPEQVEKHVNGKRY 105
BLAST of mRNA_P-littoralis_Contig819.15.2 vs. uniprot
Match: W2QB64_PHYPN (Uncharacterized protein n=10 Tax=Phytophthora TaxID=4783 RepID=W2QB64_PHYPN) HSP 1 Score: 94.4 bits (233), Expect = 5.840e-18 Identity = 49/108 (45.37%), Postives = 65/108 (60.19%), Query Frame = 2
Query: 332 VMDLLKQFDFLSIGLKG-------KIHCALTNRDLPLNSVAIQQHVNSKKLKKEREWYNADFSKYEPFIVAHKTHPKLLFCKLTHIELNRIPKQVEAHVNGKRYRNRK 634
V LLKQ +FL I G ++ C LT ++ I+QH+ SKK K R+WY D+S+YEP+IV H+ PK L+C +T LNRIP +VE HV GKRY+ K
Sbjct: 10 VQQLLKQHEFLEIVESGEGDNKRVRVKCQLTQHEMLPRVDVIEQHLKSKKFVKARDWYCHDYSQYEPYIVPHRRLPKSLYCNVTGTILNRIPSEVEKHVQGKRYKRMK 117
BLAST of mRNA_P-littoralis_Contig819.15.2 vs. uniprot
Match: A0A3M6VBC6_9STRA (Uncharacterized protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VBC6_9STRA) HSP 1 Score: 93.2 bits (230), Expect = 1.460e-17 Identity = 48/108 (44.44%), Postives = 65/108 (60.19%), Query Frame = 2
Query: 332 VMDLLKQFDFLSIGLKG-------KIHCALTNRDLPLNSVAIQQHVNSKKLKKEREWYNADFSKYEPFIVAHKTHPKLLFCKLTHIELNRIPKQVEAHVNGKRYRNRK 634
V LL + +L I G +I C LT ++P+ + I H+ SKK K R+WY D+S+YEP+IV H+ PK LFC +T+ LNRIP +VE HV GKRY+ K
Sbjct: 10 VQQLLSEHKYLEIIETGEGEKKRVRIKCQLTQHEMPMRTDIIATHLMSKKFLKARDWYCHDYSQYEPYIVPHRRLPKSLFCNVTNTILNRIPSEVEKHVQGKRYKRMK 117
BLAST of mRNA_P-littoralis_Contig819.15.2 vs. uniprot
Match: A0A484DXM0_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484DXM0_BRELC) HSP 1 Score: 92.8 bits (229), Expect = 1.980e-17 Identity = 50/111 (45.05%), Postives = 67/111 (60.36%), Query Frame = 2
Query: 323 PVHVMDLLKQFDFLSI--GLKG-----KIHCALTNRDLPLNSVAIQQHVNSKKLKKEREWYNADFSKYEPFIVAHKTHPKLLFCKLTHIELNRIPKQVEAHVNGKRYRNRK 634
P V LL Q +FL + KG +I C +T +L I+QH+ SKK K R+WYN D+S+YEP+IV H+ PK L+C +T LNRIP ++E HV GKRY+ K
Sbjct: 4 PPDVQHLLDQHEFLKVVESSKGDSKHLRIKCEITQHELVPCVDVIEQHLKSKKFVKARDWYNHDYSQYEPYIVPHRKLPKQLYCNVTGTVLNRIPFELEKHVQGKRYKRLK 114
BLAST of mRNA_P-littoralis_Contig819.15.2 vs. uniprot
Match: D8LW92_BLAHO (Uncharacterized protein n=1 Tax=Blastocystis hominis TaxID=12968 RepID=D8LW92_BLAHO) HSP 1 Score: 89.0 bits (219), Expect = 2.250e-17 Identity = 37/83 (44.58%), Postives = 58/83 (69.88%), Query Frame = 2
Query: 377 KGKIHCALTNRDLPLNSVAIQQHVNSKKLKKEREWYNADFSKYEPFIVAHKTHPKLLFCKLTHIELNRIPKQVEAHVNGKRYR 625
+G+IHC LTN D+ + +Q+++ +KK + WYN D+SKYEP+I+ H++ PK LFC +T LN+IP+ VE VN K+++
Sbjct: 20 RGRIHCKLTNHDIVADMSEVQKYIKTKKYLHAKNWYNYDYSKYEPYIIPHRSDPKKLFCIVTMTSLNKIPEVVERVVNSKKFK 102
BLAST of mRNA_P-littoralis_Contig819.15.2 vs. uniprot
Match: A0A6G0XBI7_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XBI7_9STRA) HSP 1 Score: 91.7 bits (226), Expect = 5.470e-17 Identity = 40/84 (47.62%), Postives = 58/84 (69.05%), Query Frame = 2
Query: 383 KIHCALTNRDLPLNSVAIQQHVNSKKLKKEREWYNADFSKYEPFIVAHKTHPKLLFCKLTHIELNRIPKQVEAHVNGKRYRNRK 634
+I C+ T ++P I H+NSK+ KK EWY+ DFS+YEP+IVAH+ PK L+C +T LNRIP +VE H+NG++++ K
Sbjct: 33 RIKCSATGHEMPPKVDVITAHINSKRYKKATEWYSHDFSQYEPYIVAHRRKPKCLYCNVTGTVLNRIPAEVEKHMNGRKFQRLK 116 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig819.15.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig819.15.2 >prot_P-littoralis_Contig819.15.2 ID=prot_P-littoralis_Contig819.15.2|Name=mRNA_P-littoralis_Contig819.15.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=372bp MAKQGNDSAAPAEAAAAADASKPVHVMDLLKQFDFLSIGLKGKIHCALTNback to top mRNA from alignment at P-littoralis_Contig819:55408..60164+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig819.15.2 ID=mRNA_P-littoralis_Contig819.15.2|Name=mRNA_P-littoralis_Contig819.15.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=4757bp|location=Sequence derived from alignment at P-littoralis_Contig819:55408..60164+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig819:55408..60164+ >mRNA_P-littoralis_Contig819.15.2 ID=mRNA_P-littoralis_Contig819.15.2|Name=mRNA_P-littoralis_Contig819.15.2|organism=Pylaiella littoralis U1_48|type=CDS|length=1116bp|location=Sequence derived from alignment at P-littoralis_Contig819:55408..60164+ (Pylaiella littoralis U1_48)back to top |