mRNA_P-littoralis_Contig819.4.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig819.4.1 vs. uniprot
Match: A0A6H5KR74_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KR74_9PHAE) HSP 1 Score: 222 bits (566), Expect = 5.940e-68 Identity = 106/179 (59.22%), Postives = 134/179 (74.86%), Query Frame = 1
Query: 106 PDENDKVRLFVLIYLLAGCDFLPAMSGLPFDKMWYFALKSVRAQGVFKDPLFVKDDEVWAVDIDECMKLLATMFFFKNEAAFRRGERTAGMILADVHDNVQDYVDVIRFVILRLGGKRTTATCPGFESLRLQSE*ASAVMGYWQDGLKETMPKRDFKNHGWGVDPKAKGREAEELTGSN 642
P ++KVRLFVLIYLLAGCDFLPA+SGLPF K+W ALKSVRA+GVF LFV +D VW VDI++ +KLLAT+F+F+ EAAF T G +L V+D+V++YVD+IR I++LG KRTT CP + S+R Q ++V GYWQDG K+ MP+RDF GWG++PKAKG A LTG N
Sbjct: 69 PTADEKVRLFVLIYLLAGCDFLPAISGLPFYKVWILALKSVRAEGVFNRSLFVMEDGVWTVDIEQSIKLLATIFYFRYEAAFAGVATTPGDLLRSVNDSVRNYVDLIRVAIVKLGKKRTTDICPTYRSMREQCLRMNSVDGYWQDGFKDHMPERDFNGKGWGINPKAKGSNASALTGEN 247
BLAST of mRNA_P-littoralis_Contig819.4.1 vs. uniprot
Match: A0A6H5KHQ7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHQ7_9PHAE) HSP 1 Score: 219 bits (557), Expect = 5.630e-66 Identity = 103/180 (57.22%), Postives = 132/180 (73.33%), Query Frame = 1
Query: 106 PDENDKVRLFVLIYLLAGCDFLPAMSGLPFDKMWYFALKSVRAQGVFKDPLFVKD-DEVWAVDIDECMKLLATMFFFKNEAAFRRGERTAGMILADVHDNVQDYVDVIRFVILRLGGKRTTATCPGFESLRLQSE*ASAVMGYWQDGLKETMPKRDFKNHGWGVDPKAKGREAEELTGSN 642
P +NDKVRLFVL +L +GCD+LPA+SGLPFDKMW ALKSVR +G+F PLF ++ D WAV++DEC KLLATM F+K+EAAF T ++ V +V+ YVDVIR+ ILRL K+TTATCP F SLR Q+E +A++ YWQ GL+ETMP +F GW VDP+ KG + ++LT N
Sbjct: 196 PTDNDKVRLFVLTFLESGCDYLPAISGLPFDKMWVLALKSVRTEGLFDKPLFFEEQDGTWAVEVDECAKLLATMSFYKDEAAFGTAHLTPAQLVESVDGDVEGYVDVIRYAILRLPKKKTTATCPSFFSLRKQAERGNAIVRYWQIGLRETMPVTEFAGKGWSVDPRGKGSDGDKLTKEN 375
BLAST of mRNA_P-littoralis_Contig819.4.1 vs. uniprot
Match: A0A6H5L5L2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5L2_9PHAE) HSP 1 Score: 221 bits (564), Expect = 3.550e-64 Identity = 106/179 (59.22%), Postives = 131/179 (73.18%), Query Frame = 1
Query: 106 PDENDKVRLFVLIYLLAGCDFLPAMSGLPFDKMWYFALKSVRAQGVFKDPLFVKDDEVWAVDIDECMKLLATMFFFKNEAAFRRGERTAGMILADVHDNVQDYVDVIRFVILRLGGKRTTATCPGFESLRLQSE*ASAVMGYWQDGLKETMPKRDFKNHGWGVDPKAKGREAEELTGSN 642
P ++ VRLF LIYLLAGCDFLPAMSGLPF KMW +LKSVRA+GVF LFV +D VW VDI++ +KLLAT+F+F+ EAAF T G +L V+D+V++YVD+IR I++LG KRTT TCP + S+R Q V GYWQDG K+ MP+RDF GWG++PKAKG A LTG N
Sbjct: 470 PTADENVRLFALIYLLAGCDFLPAMSGLPFYKMWILSLKSVRAEGVFNRSLFVMEDGVWTVDIEQSIKLLATIFYFRYEAAFAGVTTTPGDLLRSVNDSVRNYVDLIRVAIVKLGKKRTTDTCPTYRSMREQCLRMKFVDGYWQDGFKDHMPERDFNGKGWGINPKAKGSNASALTGEN 648
BLAST of mRNA_P-littoralis_Contig819.4.1 vs. uniprot
Match: A0A6H5JQD3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQD3_9PHAE) HSP 1 Score: 219 bits (557), Expect = 1.060e-63 Identity = 105/179 (58.66%), Postives = 131/179 (73.18%), Query Frame = 1
Query: 106 PDENDKVRLFVLIYLLAGCDFLPAMSGLPFDKMWYFALKSVRAQGVFKDPLFVKDDEVWAVDIDECMKLLATMFFFKNEAAFRRGERTAGMILADVHDNVQDYVDVIRFVILRLGGKRTTATCPGFESLRLQSE*ASAVMGYWQDGLKETMPKRDFKNHGWGVDPKAKGREAEELTGSN 642
P ++KVRLFVLIYLLAGCDFLPA+SGLPF KMW ALKSVRA+GVF LFV +D VW V+I++ + LLA +F+F+ EAAF T G +L V+D+V++YVD+IR I++LG K TT TCP + S+R Q +V GYWQDG K+ MP+RDF GWG+DPKAKG A LTG N
Sbjct: 304 PTADEKVRLFVLIYLLAGCDFLPAISGLPFYKMWILALKSVRAEGVFNHALFVMEDGVWTVNIEQSINLLAIIFYFRYEAAFAGVATTPGDLLRSVNDSVRNYVDLIRVAIVKLGKKWTTDTCPTYRSMREQCLRMKSVDGYWQDGFKDHMPERDFNRKGWGIDPKAKGSNASALTGEN 482
BLAST of mRNA_P-littoralis_Contig819.4.1 vs. uniprot
Match: A0A6H5JYK0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYK0_9PHAE) HSP 1 Score: 206 bits (524), Expect = 1.300e-62 Identity = 99/172 (57.56%), Postives = 125/172 (72.67%), Query Frame = 1
Query: 106 PDENDKVRLFVLIYLLAGCDFLPAMSGLPFDKMWYFALKSVR--AQGVFKDPLFVKD-DEVWAVDIDECMKLLATMFFFKNEAAFRRGERTAGMILADVHDNVQDYVDVIRFVILRLGGKRTTATCPGFESLRLQSE*ASAVMGYWQDGLKETMPKRDFKNHGWGVDPKAKG 612
P +NDKVRLFVL +L +GCD+LPA+SGLPFDKMW ALK VR A G+F PLF ++ D WAV++DEC KLLATMFF+K+EAAF T ++ V +V+ YVDVIR+ IL+L K+TTATCP F SLR Q+E + + YWQ+GL+ETMP +F GW VDP+ KG
Sbjct: 65 PTDNDKVRLFVLTFLESGCDYLPAISGLPFDKMWVLALKIVRTEAAGLFDKPLFFEEQDGTWAVEVDECAKLLATMFFYKDEAAFGTAHLTPAQLVESVDGDVEGYVDVIRYAILQLPKKKTTATCPAFFSLRKQAERGNTIFRYWQNGLRETMPVTEFAGKGWSVDPRGKG 236
BLAST of mRNA_P-littoralis_Contig819.4.1 vs. uniprot
Match: A0A6H5JR25_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JR25_9PHAE) HSP 1 Score: 211 bits (537), Expect = 2.260e-61 Identity = 99/180 (55.00%), Postives = 129/180 (71.67%), Query Frame = 1
Query: 106 PDENDKVRLFVLIYLLAGCDFLPAMSGLPFDKMWYFALKSVRAQGVFKDPLFVKD-DEVWAVDIDECMKLLATMFFFKNEAAFRRGERTAGMILADVHDNVQDYVDVIRFVILRLGGKRTTATCPGFESLRLQSE*ASAVMGYWQDGLKETMPKRDFKNHGWGVDPKAKGREAEELTGSN 642
P +NDKVRLFVL +L +GCD+LPA+SGLPFDKMW ALKSVR + +F PLF ++ D WA+ +DEC KL+ATMFF+K+EAAF T ++ V +V+ YV+VIR+ IL+L K+TTATCP F SLR Q+E +A+ YWQ L+ETMP +F GW VDP+ KG + +ELT N
Sbjct: 145 PTDNDKVRLFVLTFLESGCDYLPAISGLPFDKMWVLALKSVRTEILFDKPLFFEEPDGTWAMHVDECAKLVATMFFYKDEAAFGTAHLTPAQLVESVDGDVEGYVNVIRYAILQLPKKKTTATCPSFFSLRKQAERGNAIFQYWQHDLRETMPATEFAGQGWSVDPRGKGSDGDELTKEN 324
BLAST of mRNA_P-littoralis_Contig819.4.1 vs. uniprot
Match: A0A6H5KTG2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTG2_9PHAE) HSP 1 Score: 218 bits (554), Expect = 3.590e-61 Identity = 101/180 (56.11%), Postives = 132/180 (73.33%), Query Frame = 1
Query: 106 PDENDKVRLFVLIYLLAGCDFLPAMSGLPFDKMWYFALKSVRAQGVFKDPLFVKDDE-VWAVDIDECMKLLATMFFFKNEAAFRRGERTAGMILADVHDNVQDYVDVIRFVILRLGGKRTTATCPGFESLRLQSE*ASAVMGYWQDGLKETMPKRDFKNHGWGVDPKAKGREAEELTGSN 642
P +NDKVRLFVL +L +GCD+LPA+SGLPFDKMW ALKSVR +G+F PLF ++++ WAV ++EC KLLATMFF+K+EAAF T ++ V +V+ YVDVIR+ IL+L K+TTATCP F SLR Q+E +A+ YWQ+GL+ TMP +F GW VDP+ KG + +ELT N
Sbjct: 657 PTDNDKVRLFVLTFLESGCDYLPAISGLPFDKMWVLALKSVRTEGLFDRPLFFEEEDGTWAVHVNECAKLLATMFFYKDEAAFGTAHLTPAQLVESVDGDVEGYVDVIRYAILQLPKKKTTATCPSFFSLRKQAERGNAIFRYWQNGLRATMPATEFAGKGWSVDPRGKGSDGDELTKEN 836
BLAST of mRNA_P-littoralis_Contig819.4.1 vs. uniprot
Match: A0A6H5L6D9_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6D9_9PHAE) HSP 1 Score: 218 bits (554), Expect = 6.260e-61 Identity = 101/180 (56.11%), Postives = 132/180 (73.33%), Query Frame = 1
Query: 106 PDENDKVRLFVLIYLLAGCDFLPAMSGLPFDKMWYFALKSVRAQGVFKDPLFVKDDE-VWAVDIDECMKLLATMFFFKNEAAFRRGERTAGMILADVHDNVQDYVDVIRFVILRLGGKRTTATCPGFESLRLQSE*ASAVMGYWQDGLKETMPKRDFKNHGWGVDPKAKGREAEELTGSN 642
P +NDKVRLFVL +L +GCD+LPA+SGLPFDKMW ALKSVR +G+F PLF ++++ WAV ++EC KLLATMFF+K+EAAF T ++ V +V+ YVDVIR+ IL+L K+TTATCP F SLR Q+E +A+ YWQ+GL+ TMP +F GW VDP+ KG + +ELT N
Sbjct: 1676 PTDNDKVRLFVLTFLESGCDYLPAISGLPFDKMWVLALKSVRTEGLFDRPLFFEEEDGTWAVHVNECAKLLATMFFYKDEAAFGTAHLTPAQLVESVDGDVEGYVDVIRYAILQLPKKKTTATCPSFFSLRKQAERGNAIFRYWQNGLRATMPATEFAGKGWSVDPRGKGSDGDELTKEN 1855
BLAST of mRNA_P-littoralis_Contig819.4.1 vs. uniprot
Match: A0A6H5JT24_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JT24_9PHAE) HSP 1 Score: 207 bits (526), Expect = 1.100e-58 Identity = 98/180 (54.44%), Postives = 129/180 (71.67%), Query Frame = 1
Query: 106 PDENDKVRLFVLIYLLAGCDFLPAMSGLPFDKMWYFALKSVRAQGVFKDPLFVKD-DEVWAVDIDECMKLLATMFFFKNEAAFRRGERTAGMILADVHDNVQDYVDVIRFVILRLGGKRTTATCPGFESLRLQSE*ASAVMGYWQDGLKETMPKRDFKNHGWGVDPKAKGREAEELTGSN 642
P + DKVRLFVL +L +GCD LPA+SGLPFDKMW LKSVR +G+F PLF ++ D WAVD+DEC KLLATMFF+K+EAAF + + +L V +V+DYV ++R+VIL L K+TTATCP +LR Q E +A+ Y Q+GL+ETMP +F GWGV+ + KG +++ELT N
Sbjct: 403 PTDADKVRLFVLTFLESGCDCLPAISGLPFDKMWVLVLKSVRTEGLFDKPLFFEEQDGTWAVDVDECAKLLATMFFYKDEAAFGSAQLSPPQLLESVDGDVEDYVSLVRYVILHLPKKKTTATCPSSVALRKQEERGNAIFRYCQNGLRETMPTTEFAGKGWGVEIRGKGSDSDELTAEN 582
BLAST of mRNA_P-littoralis_Contig819.4.1 vs. uniprot
Match: A0A6H5JVZ4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVZ4_9PHAE) HSP 1 Score: 206 bits (523), Expect = 4.200e-58 Identity = 104/197 (52.79%), Postives = 135/197 (68.53%), Query Frame = 1
Query: 106 PDENDKVRLFVLIYLLAGCDFLPAMSGLPFDKMWYFALKSVRAQGVFKDPLFVKDDEVWAVDIDECMKLLATMFFFKNEAAFRRGERTAGMILADVHDNVQDYVDVIRFVILRLGGKRTTATCPGFESLRLQSE*ASAVMGYWQDGLKE------------------TMPKRDFKNHGWGVDPKAKGREAEELTGSN 642
PDEN+KVRLFVL YLLAGCDFLPA+SGL F++MW ALKSVRA GVF +FV+D+ VW V+I+ C+KLLAT+F+F+ E +F+ + G +L ++ VQ+YV +I FVIL+ G R+T+ CP +ES+RLQ A+AV+GYWQDG KE T+P RDFK+ GWGVDP K + ELT N
Sbjct: 341 PDENEKVRLFVLAYLLAGCDFLPAISGLGFERMWECALKSVRAVGVFDSSIFVQDNGVWNVEIEACVKLLATIFYFRYEVSFKDVCESPGDMLRMLNGEVQEYVKLIGFVILKHGTARSTSVCPAYESMRLQCLRANAVLGYWQDGCKESXXXXXXXXXXXXXXXXXTVPPRDFKDQGWGVDPTLKNFASLELTKEN 537 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig819.4.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig819.4.1 >prot_P-littoralis_Contig819.4.1 ID=prot_P-littoralis_Contig819.4.1|Name=mRNA_P-littoralis_Contig819.4.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=145bp MARRWLRRLAPDENDKVRLFVLIYLLAGCDFLPAMSGLPFDKMWYFALKSback to top mRNA from alignment at P-littoralis_Contig819:34409..35197+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig819.4.1 ID=mRNA_P-littoralis_Contig819.4.1|Name=mRNA_P-littoralis_Contig819.4.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=789bp|location=Sequence derived from alignment at P-littoralis_Contig819:34409..35197+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig819:34409..35197+ >mRNA_P-littoralis_Contig819.4.1 ID=mRNA_P-littoralis_Contig819.4.1|Name=mRNA_P-littoralis_Contig819.4.1|organism=Pylaiella littoralis U1_48|type=CDS|length=435bp|location=Sequence derived from alignment at P-littoralis_Contig819:34409..35197+ (Pylaiella littoralis U1_48)back to top |