prot_P-littoralis_Contig818.29.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig818.29.1
Unique Nameprot_P-littoralis_Contig818.29.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length385
Homology
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BLAST of mRNA_P-littoralis_Contig818.29.1 vs. uniprot
Match: D7FYF5_ECTSI (FYVE-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYF5_ECTSI)

HSP 1 Score: 79.0 bits (193), Expect = 3.450e-12
Identity = 69/124 (55.65%), Postives = 78/124 (62.90%), Query Frame = 0 
Query:  222 PHRRSHGRLDPVSAAAAATRPQPRSPAIGRVVPPIDDSLTAEQAQAIIDAADMAAAEAVVAAAEAQEAINVAAAVSPARTP--LTRSLTASAEGAALAPAAAPRSPRHRPVTIRHDSAVARTLR 343
            P  R HGRLD  SAAAAA RP+    A+       ++SLTAEQAQAIIDAADMAAAEAVVAA EAQEAI VAAA SP+RT   +  S TA+  G  +A AA    P         +SAV R LR
Sbjct:  283 PRPRLHGRLDATSAAAAAERPR----AVTARGVSQEESLTAEQAQAIIDAADMAAAEAVVAAVEAQEAIAVAAATSPSRTAPGIVVSATAAGTGTGIAAAATVSQP---------ESAVRRILR 393
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig818.29.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FYF5_ECTSI3.450e-1255.65FYVE-type domain-containing protein n=1 Tax=Ectoca... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..32
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 52..66
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 142..169
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 210..246
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 314..333
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 354..373
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 216..230
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 82..98
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..173
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 67..81
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 33..51

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig818contigP-littoralis_Contig818:109235..110389 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig818.29.1mRNA_P-littoralis_Contig818.29.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig818 109235..112006 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig818.29.1 ID=prot_P-littoralis_Contig818.29.1|Name=mRNA_P-littoralis_Contig818.29.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=385bp
MSSGPQQQQQVVETSAGLLTEEGWQPQQPQATGSDSVPPPPPLPPAPQEP
APSVSTAITTTTTATTAEPPPPLPSVSQEPAPPVPTTTTTTTTRTGEQHL
FVPLPLEADTLGSEERDAGDSASAAIETSEAAAAAAAAARGSSGSSPRNL
GGAGSSGATSTSAGREAVVATAQSTAAAAAAVAAVARQEAREATVPFEVM
TVAAARPPPYNSLERLDETRQPHRRSHGRLDPVSAAAAATRPQPRSPAIG
RVVPPIDDSLTAEQAQAIIDAADMAAAEAVVAAAEAQEAINVAAAVSPAR
TPLTRSLTASAEGAALAPAAAPRSPRHRPVTIRHDSAVARTLREIESTEA
AAALSSRPSRDARTATAAGRLNETGAAAAAAAAAG
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