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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 0 |
| Start | 1 |
| Model size | 481 |
| Hectar predicted targeting category | other localisation |
| Exons | 2 |
| Cds size | 480 |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1680791669.0379174-CDS-P-littoralis_Contig816:105784..105973 | 1680791669.0379174-CDS-P-littoralis_Contig816:105784..105973 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig816 105785..105973 - |
| 1680791669.0490074-CDS-P-littoralis_Contig816:114219..114510 | 1680791669.0490074-CDS-P-littoralis_Contig816:114219..114510 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig816 114220..114510 - |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig816.22.1 >prot_P-littoralis_Contig816.22.1 ID=prot_P-littoralis_Contig816.22.1|Name=mRNA_P-littoralis_Contig816.22.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=160bp
MSSTAAASNTEQDSSSKSTSSGSTLPHPTDFYSSEKYRGRKFATERLQLN
VALDWGRCGGTKTDTTSSLERISANSSAQTELQQHSVLLGTAPVRLQHHL
CVITKLVGARRTPYSMDADRLLLSALYSSEGNARGVRNALEAGARANGLS
DEPLSPLMIA back to topmRNA from alignment at P-littoralis_Contig816:105785..114510- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-littoralis_Contig816.22.1 ID=mRNA_P-littoralis_Contig816.22.1|Name=mRNA_P-littoralis_Contig816.22.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=8726bp|location=Sequence derived from alignment at P-littoralis_Contig816:105785..114510- (Pylaiella littoralis U1_48)
ATGTCCAGCACAGCAGCAGCAAGCAACACGGAGCAGGACAGCAGTAGCAA
AAGCACAAGTAGCGGCAGTACCCTCCCCCACCCCACAGACTTCTACTCTT
CGGAAAAGTATCGTGGTCGAAAGTTTGCTACTGAACGGCTGCAGCTCAAC
GTAGCTCTTGACTGGGGGCGGTGTGGAGGGACGAAGACGGATACCACATC
CTCCCTTGAGCGTATCTCCGCCAATTCTTCCGCCCAGACCGAGTTACAGC
AGCATTCCGTCCTCCTGGGAACAGCGCCTGTGAGACTACAGGTGTGTTAC
AAGACAGGACAGGATGGCCGGAGTTGCAAAGTCTCTTTGATTCGAAGATG
GTTGTAGTTGCTGTCGTTAGAGCTGTGCATTTGGGTTGCTGCTGTGTGCA
GGCAGCGTCGTGTGTTCGTCGTTTCCGTTGATACGTTTCCTTTATAAGGG
TCTGTCTAATCATTGCGGATTTTTGCCGGGAAACAGAGAACCATTCCTGG
AAACCTAAAATCTCCGACAATATGCAGGCGTTCTTCTCGGTTTCCCTGAA
ATGAGCACTGCCCAAAAAATCCCGAAATACTCATTTCAGGGTTCCCGGAA
ATTTGAACCCGCATTTCGGGCAGACGTGCCTCCAAGTTCGGGCACGCCTG
CATAGGTGCTCAGTTCACACGAGCTGTCGTATGCACGCCATCCCCAGGCC
ACACAACCACACAGTGAGTTCACAGGGTCGCCCTAAGGCCATGGCTGATG
GGAGGAAGCGCCTTCGGATGCTTTGCTTGGCGTCTAGAGTTCGGATGCGG
CGTGACTGCTGTGGGCGGGAAGAAGCTCGGGCTTCAGGATAAAAAACAGA
GAAAAGGCATTTTGAAAACAAATACTCGCCCAATCGTTTAGAACAGAGCG
AAACTCAGTTCATGTTTCCCGGGAATGGTTCTCTGTTTCCCGGCAAAAAT
CCGGAATGATTAGACAGGGCCTAAGTCTCCTTTCTTGTCATATCATATCA
TAAATCACGTTCAAAGCACCTGGGGTAAACTGCATATCAAGACTAGTTCT
CAACCACTTTCCAATTTTGCTTAATTTTGGAATCCTCCAAAAAACACACA
AAGTGTCACGGAATAGGGCCATCAACCCAGCAGAAAAGGTTGGGGGCCGC
AACAATGGCTGCCGGTGAGATGGTGGTTGGGGAGCAATGATATCGCAAAA
CAAATGTTGTGATTCAGAACTCCGTTTTAAGGGTTGCCTGACAAGGGCTG
TAAAAAACACCCTCTGAACCGTAACATTTATGTGCGGGACAACTGAAAAA
AAACGCGTTCTTGTAGGGGGGACGAACAAGGGGGTTCTGTTAGCATATAA
AAATGGACCCCCCCTCATGCTCAGTACATGTGGTTCAATACCACCACACG
ACGCTGCTGTGACTGCAACCAGGGCGGCGTGGTGATACTGCCACGCCACA
AGCGCGGAGGTGAAACGAATGGAGTCTAGCACTAGGTTAGATGCGAAGCG
GGTGCGCAAGTCCACACATGTACACCAGAGCTTCTCCCACAAAAGAGAGG
TAGACGCAACGAAACAGCAGAAAGAGGAGCAGCAGCAGCAGCAGCAGCAG
CAGCAGCAGCCCGCGGGAGAGCGCTATTATTGCGGACCAACGACTCAGCC
GTGGTGGCTGAGCGGCGCTCCATGACCGCACGCCCCGATGGTGCTGCAGT
GGAGGGCGAGGAGGATGCCATCTTTGACAAGCCCATGGTGGGGGAGGAGC
TAGAGGGTTTGATGGGAGAGCCGCCAAGTGTCAGCAATGAATCCGCACTG
GCTCTCATCAGCAAGAAGCATGCCACGACCCACCCCAAGACCATCCGCGA
CTTCATCGCGGATACAGCTGCTCGGCTTGCGATCGAATCGGGTTGTGTAG
ACGAGGCGCCGCTCGTTCTACGTGGAAGGATAACTCGGCGCAGAAACGTG
CGTCCAACACCAGTCTCGTCTCCTCGGAAGGTTGACCTCCAGGTGATTCA
CCACAGCAAAAAAATCGCATGTTGTGCAGCCTCCTGCTGTATGGTCGTGT
GTGCAAGAAAGAAAGTCGCACTCTATATTCGATACTGCTGTGGTCCTCTT
CCTTTCTTCATTGCCTGGTATGTTTTTGCTTGACCTGTTCACACGACCGA
TGTACTAAACGTATCCTATTATACTTACCCGTAATTTGTACGAGTGAATC
ACGTGCATAATAGTTGCCCGTAGTTTGTATTTGTATGGTAGCATCCGGGT
TGTCGTATAACACAGCACACCATATTCTGGAAACCCATCAGCCAGCCTAC
TGCGTGCTTGCCTCAAGACCAACCCATAGCTATACTACAGTATACCTGTA
CGACATCCGAGGTCGGATGGTCCTGCTGTTAGGCGTTTCGTGTTCGTACT
ATTTGCTGTGATATTTGTGCGCATACAGACCATCATAGCAGCAGCTACAC
CGCAATGTCAGAAGAGTGATATTTCTGCTGCTGTTGTTGCTTTAGCTTTG
GTTTCCTACGCCAACACCACCACCGCAGCAGCAGTAGGAGCACCTGGATG
AAAAGCGCTGCTACTGCTGCTGCTGTTGTTGTTGTTATCTTCTTTCGTAC
AGCAACGAAAATCGCCATGAGCCAGTCAGCACTCTGATGACAGCAGTAGC
AGCAGTACTTGTAGCAAGGTAAGATTGAGACGTCGCTGGATATACACAGC
CAGATAATGTACAACTGGGACTGTCTGTGGGCCGAACGATAGGATGGAGG
GTAATGCGGGCAAATACCAACCGACACGCTGCGGCTTTCTTTTTTGCTGA
AAAGTTAGCAGTAATTTTTCCTCGTCCTTTCTTTCTTGTGACATGGTCAA
ACGAAAGTTGTATAACCGCGGGAAACCCATGACCACGGGCAAAGTATTTC
AGCATGCTCTCAACTGCCCCCCCCCCCTCTCCATATCCCCGCCCACTTCC
CTCCCCTGTTCTTGATTGATTTTGAATTATTTAGCGTGTGCTCGACAGGC
AAACCAAACGCGACCGCGCCCCTAGTTACCTCCTTGCGAAAGGGCGAGGA
ACCAAAGTTACTACGATACTTCTACAGACTTGCTCTGCGTCGGGCAGGGG
AATCAATGTCCGGCGGGGGCTTCCATGATCGCCGCTCTGAAGGTGTTCGG
AGTAGGGGGAGAATGGTATCCCCCGCGAGATTGTCTCCGCCATGTGCAAG
TACTACAAACGGGCAGATGGTCTATGGTATTCCTGCAGGCTTAGGTCTCA
TGTCGGGGTGTGCAATGGGGGTGAAACTTCCGTTCGATGGGCGGGGCGCG
AAGGGGGGCGGGGGGGGGGGGCAAGGGGGCTGTACGGCAGCGGTGGCCGA
CCTGAGTGAGGCGAGAGATGTTCCTGCAGTCAAAACAGAACGAACCTTTC
GTCTGTTTTTTTGTCGTCTTTCTCCTTTCGTCTAGCGTCTTCCATAAGTT
TTAGGGTTAGGGTAGAAGGGCCAGGTCCAACCTATCTGCGCCCAAGCATA
CTGGAACATGTACGGGCGTATTTTTTTTTTCAGTACGGTATAATCTATTG
CGTGTATATAGTGGATTTTTGTGAAGAGTGCGCGCATCTTTTTGATTTTT
TAGTCCTCCTGTGATGCGACTTTTTGGGGAGCCTACTTCAGGGATTACAG
GTTTCGCTGTTGGTGACAGGGAGGGGGGCTGGAATCTCACACGCTACGAA
GGCCAAACAACAATAGTATTTCGCACAAAATAACGTTTGGCCTTTACCAG
TCCACTGTTTTTTTTTTCCGCATCCCGATGTCGTGCCAGAGGGCACTTAC
GGAGATGTAATGTCGGTGATGCATTTGTCGCCCGTTAGCATTTGGGATCG
CATGGAACAGCAGGAAGAAACGGTTTGAAGTAATCCACCGCTGCCGTGAC
ATTCCGTGTGTTCAAATTGTTTTTAAGATTGCACTTTTTAGCTCCGAGGG
TTTGACTTGCTGGTACTGTCGGCCAACGTTCGGTGCAATGTCTGTGCGGT
TGGTGGCCGGTCAGATTTCGCACGGCCTACACATGTGTGGAGCGAAAAAC
AAATTATGCCAGAGTGTACACGCCTCGGATTATGTATCCTCTGAAAAAGA
ACCCACAGTGGTAAAATCTGTGATACGACTCTGACCCAATGAAGTTTCGA
CCGAGAGGCGAAATGGCTCGTTGGTCGCTTTTTCAAGTAGTAGACATAGA
GTTGCACGAACAACAAAAATCGTCGTATGCCTTGGGTTACTTTGTCGAGT
TGGCCGCCCGAAACTACTGGGTGTTTCACGCTCGATAAAACGCTTATGTT
TGTATTGTATCTCATATACACCACCTAGGTCAGATGACGGTGGTGGTGTG
CCATCGAAGGAAGGTCGTCCCAAAGAATAGAGCACCAATCTTGCTTCTGC
TCGCTCTCATGACCTTTACGGGCGGTCTCCTGATCCTCGTCCACAACAAG
GCATTGTACAGTTTGTGGTGTTCTTTTTCCGCCCTTGTCCGCCAATCCTC
GAAATACTAGGAGGGAAGGCTTCCAGCACATGAACAAAAAATACCACACA
CATCATTGATTTGTTTAGAGATCAATTATTGCTTTATTCCGCTCGAGAGC
AACGCTTCCAACCGCGAAATATTTGGTGTACTCACGCCAGGCCAGATAAC
AGGGGCAATTTTTACCAGGGGGGCGTCGTAATAAGAACGCATCAAAGTTC
CCTCGACGCGCTCTCGCGACCTCTACGGGCGACTTCCCGAGTCCACTCCT
GTTGGATTCTTGGGCAGATTTTCGGCCCCTTCCTGGCGTGCTTTTTCTTC
GCCAAGAAATCCCGCCCCACATGTGCGTCGGTGCAAGTCGAGCACACGCC
GATTGTTGGTTGCTCCCCATCCGTGTCCGATGCTAGTTCGGCGTTCTTGT
CCGTGTTGCTGCCTGCAGAGGTGTATTCCGGCAATGTGAAAGCGGTCCCA
GCCTTTCGCTTCGTCGTCTCATGCTTCCACGCTGTTCGGGCTCTATCGAG
TCCAGGAACAAGTCAATGGCGCCGGGCGCCAAGCCAAGAATTTTTTCTAC
GCTGCCGTTTTTTAGCCAGCAAGAAGAGGTTTTTATCTCGTGTAGCCGCG
TCTCGACTTCGTCGGCCGTCAGGACCTGAGCGTGTTCCGCCATTTCTGCA
TGTAGTACGAAGTAGTTATATATGGGAACAAAATAAACGAAATGTTGATA
TAGGTGTGGCGATCAAGAGCAAGAGCATGTAAGTTCATCTAGATCATTCC
CATCTTCAAGCACAGCTCATCTCATGAACACAGCAACCATCCTCGACCAC
CCCCCTGTTGGGTGTGGACACACACTGGGTCCATTTAAATCAACAAAATT
AGAAACAATTTGCATTGTTATGTACTTTAAAACAGGCCAACTACACCTGA
TGCAGCGTCCTGTTCACCTCTTGGGCACCTGCCTGCCCGCGGTAGGTTGT
TTATGTCGTCCTTACACCGTGCACCATGGCCTAACCCACAACAGCAGTGC
CTGGTGTGTTTTCCACTCTAAATCCTTATTCATAAGGCTTTTGACTGCTG
TACAAATTACCGACACGGAAAACGGTATAATTAGTGCATTTCTTGGTCGG
TACCCGATGACAAGACATTATGTGAAAGATCTTTGCCGGGGCAATCTTTT
GTTGTGAGGTGGATAAGAAAAAGGGGACAGTTAGGCTACTTTTTATGTGT
CAAATATCAAAATATCAATTCTGATTCGTTTTCGATTTTGACAATTCCCG
CGGTGTGGTATCAACATCAGATGTTATGTGTAAAATAAACAATTTATCAA
CATCAAAAACGTATTTTTCGTACGGCAGTACAGGTATCGTATATGTAGGA
TCCCAAGAAGAGCCGTTTGGGTAGTATACAGCAGTAGTACAAGTAGCACA
TTTCAAAAATTTGGAGCGAGCGCAGCACCCTCTCGGGATGGAGCACGACG
CGCTGGGTCACAGCCAGAACAGAGCAGCACCGCGCGTAAACCATACATCT
AGACAACAAGGTGTTGTCCCTCCCGCTCAACTACTCGGAGTGCACCCAGG
CCTATTTATTTCAAGCTTTTTTTGGGAGGCTATTCGTAGCAAGAACAAGT
ATAGACTACAGCTAGCTGATGATTCATATATATGGAGGGCATCTATCTGC
ACAGCAGTGTACGAGTGCTTGTAGGTGAAACGCAATCAGTCGCTCTCTGC
TGCTGCCGCCATGGGATGAAGGGTCACGCTGCTGGCGGGCGACGACGAGG
AAGTAACACGCTGACCGCCCGCGATAATGTAGCAGCAGCAGCAGTAGTGA
TGTGGCAGTACTGCTGCTGCTGCTGTGGGTCCTTGTGTTGTATGATGGCT
TGCGTCGGAGTCTCAAACGTTTTCAATAATCATTTTTGATATGCGGAGTA
GATCAGAAATGAGGCTCATTTCTGAGCTGGTGCTGGATCAAAAATGATTA
TTGAAAATGTTTTTATCAAAAATGGCCCATTTCTGATCACATAACATGCC
GGATCTGTGCCAAATATCGAAAACGAATCACTTTCGATATTCAGATTCGA
CACATAAAAAGTAGCCTTAACCATGCGAAAAACGCTATAATGCGTGAAAA
AACCCACCGACAATTTTTATATCGCGACAAACGCAATAACTTTGCAATTC
CGGGCACTGCTGACAAGAAAATTGGCCAAGATGATCTATGGGTATAAAGG
CATCGATCAACACTGCTGTATGCGTCGTACTCCGTGTGTTGGTCCCGTTT
ACGCCGCGCTAGTGCGCCGTACCGCCTAAAAAAGCGTGATTTCAGACCCG
TATTTGACACATCGAGAAAACCTGCACATCTGCCTGCCCAAAACATTCTG
GTGCCCCTATGCGACCCTGGCACTCATGCTGAGCCGTTTAAGGCCATCAG
CTTCTGGTCTTCGTGGCCTACAGCACTAATGGCGATGAAACTGCGTTCCT
GGAGGGTTGTCAGGGAGTGCAGAACACCTGTTTTAGAACCGCACCAGATA
GCACCTTCACCGATTTCTCTTTGGTCTCGCTAAAACTTTTCACCACCGGT
CACAGATCGATTCTACATCAGATGTACAGCTCATCTCACCGGCTGTTCAC
TCCAGCACGTCGCCGCCAGCTCCTCTGGGTGCGTCTCAATAGAAGGGTGG
TTGCCCCCGGTTGGTGCTGTTTTTGGTTCTGGACGGGTTTCCACCGCACT
TTAGAACCAATATGTTTGCCTTTTACCGAACGGTTACATAGGTTGTCAGG
GAACCCTTAATTTCGCATCCCCTAAATCCGAGATGATAAGCTCCCTGTGT
TCTTAATTCAACACAGTGAGCACGAGAGGGCGCTCATGTGAGACCTGTGG
TTTTAAGCCGAGATAACGAATGGCATCAGTAGGAGATATCATGTGGAAGC
GACGTGTATGTTGGCTAGCTCAGATCTTCTGCTGGGGCTGTGCTATCGGT
GGTTGAAAATGTGTTTTACAGCAATCGAGATTCTGTCCGCATCTCGGCCC
GAGATCAAACACCTTGCACGATCTTCCACTGCTGTACTCGACGCTTTGGA
CCCCAATCTCCGGAACTTCGGGTCTACAGGATATCATAGCCCATACCACT
TGCTGCCTAGGACAACGCTCAGTTCAGGAAATTGGGGGGCCCATGGCGGC
GAGTACAGCAGTGGAAGATCATGTAAAATAGTAAAATGTTTGGTTTCGGG
CTAAGATGCGGACGGTTTTTGGGCTGCTGCATGCACCACATACCTTCGAC
CAACGATATCACAGCCCCAGCAGAAGCTCTGAGATTGCAAACACGCTCGT
CGCCTCTACACGATATCTTCTACTGATGTCCTTCGAGCAATCGGCTTAAT
TCAAACGGGAAGGTCGATTTTTATTTTCGGTGATTTTTGTACTGGACAAA
GACTGAATATTTTTTCGAACTGAAGCAGGTCGAGAGGGGTCCCTTAAACA
AATACCTGTATGCGCAATACGAGGTAAACAACTCTTCAACTTGTAGTTAG
TTTGGCCGATTTTCAACGCTCGATTACTCAGATACCATGAAAGAGCGATA
TCGAAAGAGGAGCGTTGGAACGATGTCTCCTCCAAAACATTTCGTTTGAT
ATCGGTACTTGTGCCCTCTTCCTTTCGGAAGAACCGAAAAAATGAAAAAA
AATGAAAAATGACCGTGTGGGTTGTGTGGTAGACCTACTACTGTAGGTTG
GTCACAAACTGCTGCTGCTGTGTTTGCAACAGCTGTCTTCGTCTGGCCTG
AGTACGGGCTGTGTCACATGCGACGCTTTTTGCGGTGTTAGCATGAGGGT
GATCTATCATTATCAGGTAACCTTGGGAAGACAGTGAAACACTGCTGTAC
GCCACCTTCCGTCCTGTTTCACATCTGGACGGCGTAGGTGACTTCTTGGC
GTACAGGACAGCGGGCGCGAAACAGGTGGAGACCGAAATATTTGACGCGC
AGTCACCCCGTCAAATGTGTCATCCTGCTCACGCTTGCCACCCCGCAACC
CCGCCCCCCCCCAATGTTTTCTTTCGTTCATACTCAGCATCATCTGTGTG
TGATAACAAAGTTGGTGGGCGCGAGAAGAACGCCGTATTCGATGGACGCT
GATAGGCTGCTCCTCTCGGCGTTATACAGTTCCGAAGGAAATGCGAGAGG
TGTCAGGAACGCCCTCGAAGCCGGGGCACGCGCGAATGGACTGAGCGACG
AGCCTTTATCTCCCCTTATGATCGCC back to topCoding sequence (CDS) from alignment at P-littoralis_Contig816:105785..114510- >mRNA_P-littoralis_Contig816.22.1 ID=mRNA_P-littoralis_Contig816.22.1|Name=mRNA_P-littoralis_Contig816.22.1|organism=Pylaiella littoralis U1_48|type=CDS|length=480bp|location=Sequence derived from alignment at P-littoralis_Contig816:105785..114510- (Pylaiella littoralis U1_48)
ATGTCCAGCACAGCAGCAGCAAGCAACACGGAGCAGGACAGCAGTAGCAA
AAGCACAAGTAGCGGCAGTACCCTCCCCCACCCCACAGACTTCTACTCTT
CGGAAAAGTATCGTGGTCGAAAGTTTGCTACTGAACGGCTGCAGCTCAAC
GTAGCTCTTGACTGGGGGCGGTGTGGAGGGACGAAGACGGATACCACATC
CTCCCTTGAGCGTATCTCCGCCAATTCTTCCGCCCAGACCGAGTTACAGC
AGCATTCCGTCCTCCTGGGAACAGCGCCTGTGAGACTACAGCATCATCTG
TGTGTGATAACAAAGTTGGTGGGCGCGAGAAGAACGCCGTATTCGATGGA
CGCTGATAGGCTGCTCCTCTCGGCGTTATACAGTTCCGAAGGAAATGCGA
GAGGTGTCAGGAACGCCCTCGAAGCCGGGGCACGCGCGAATGGACTGAGC
GACGAGCCTTTATCTCCCCTTATGATCGCC back to top
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