mRNA_P-littoralis_Contig813.9.6 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig813.9.6 vs. uniprot
Match: D8LRB1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LRB1_ECTSI) HSP 1 Score: 426 bits (1094), Expect = 4.820e-131 Identity = 307/661 (46.44%), Postives = 370/661 (55.98%), Query Frame = 1
Query: 145 IINRGELVFQKTSTFKDS-SASAVYAYSGDITFEGDAVFENN--IVEGE-NGNGGGLRVDDGGWVAFNAAVSFIG------------------NLVNESEDP-----RSGGRGAAMLIGSRREEQFVFAGPVLFQGNLGMVSSRHVCLL--IANCGFQGGVTATGNSAMSGGVFYISDGVVNIAGPVSITGNEARGTGGAIWSGAARLTLPADAELSGNTAP-DCPGIHFDTGEVVFTDGATYTEASQELCFLDTDDAATXXXXXTSGGREERVEDFECVVYSATAPTTFGHPTLALDTAEVETWNLGTSVTAGFSCPTQLIIYVTGGQDLTVTSTAPSSVMSNVRFEVSGFSKLVLDIPGLTMAGIYKSEVGGALFVDTGSSMDVMNDITFEGNSLRLDYDSPGAWVVRGGAAVYSEGDVNFFGEANFLGNGQYMAIADGYSGWNQDGGALANHGTMQFMKKGTFKDNFNPNGGNXXXXXXXXELTFNLRAIFRNNSVGETYTDDGXXXXXXXXALYNEGPDSTVLFKRLAIFQDNVGSLGGCSVASMRYVDNGGDDEVSAADNKITFEGKAKFNDNHCDGDYP-------SIYEDDDGSSTESRDGGALLVYGASSVDFQDTAVFKRNEAVNGGAIANSASISFVSNAKLFVESNVAAA 2016
I N G L+FQ T+TFKD+ A+Y + GD+TFE DA+FENN I G+ NG+G GL + G V F A FI NL + P SG GA L G E V + + L S L +N FQ G+TATGN A GG Y+ CPGI F GE+VF G TYT AS ELC+L T +T T + VE+F+C YSATAPT+ P L +DT E+++W+ G+ GFSCPTQ+I+YVTGG +LTVTS+A S+ + N RFEVSGFSKL+LD+PGLTM GIY+S+ GGALFVD GSSM+VM+DITF GN+L + YD G W RGGAAVYS G F+G A+FLGNGQY A ADGY N+DGGA+ N G+M F +KGTF DNFN XXXXXXXX +NNSVG YT XXXXXXXX DSTVLF LAIF DNVG G ++AS + DD+ S D+K+TFE KAKF DN+ P S Y D E + GGAL G +SVDFQ+TAVFKRNEAV GGAI NS SISF+S AKL NVA++
Sbjct: 167 IANLGTLLFQGTATFKDTPDGGALYTW-GDLTFEKDAIFENNKSINGGDGNGSGAGLYSELDGEVLFMGAAYFIXXXXXXXXXXXXXXXXXXCNLPTVFKGPVVVRGNSGMLGALYLNGDVTFEDLVTVEDNIMEPKLYGDRSEGAIRLGSYSNVDFQAGITATGNIAKDGGALYVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSCPGIEFTDGEIVFDGGETYTSASTELCYLGT---STDGSTPT-----DLVEEFDCEAYSATAPTSNDLPILVIDTQEIKSWDFGSG--GGFSCPTQMIVYVTGGGELTVTSSAASTTIDNARFEVSGFSKLILDVPGLTMTGIYQSQAGGALFVDVGSSMEVMHDITFLGNTLAIQYDL-GLWEARGGAAVYSAGTTTFYGTADFLGNGQYDADADGYEPSNEDGGAVYNSGSMTFARKGTFLDNFNXXXXXXXXXXXXXXXXXXXXXXXKNNSVGVAYTXXXXXXXXXXXXXXXXXDDSTVLFSGLAIFSDNVGGTAGAALASKGSDPD--DDDASDVDSKVTFEDKAKFKDNYI---IPPRRPTSSSEYVVD-----EDKGGGALAALGVTSVDFQNTAVFKRNEAVKGGAILNSGSISFLSEAKLVTADNVASS 805 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig813.9.6 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 1
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig813.9.6 >prot_P-littoralis_Contig813.9.6 ID=prot_P-littoralis_Contig813.9.6|Name=mRNA_P-littoralis_Contig813.9.6|organism=Pylaiella littoralis U1_48|type=polypeptide|length=588bp MLIGSRREEQFVFAGPVLFQGNLGMVSSRHVCLLIANCGFQGGVTATGNSback to top mRNA from alignment at P-littoralis_Contig813:84694..111374- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig813.9.6 ID=mRNA_P-littoralis_Contig813.9.6|Name=mRNA_P-littoralis_Contig813.9.6|organism=Pylaiella littoralis U1_48|type=mRNA|length=26681bp|location=Sequence derived from alignment at P-littoralis_Contig813:84694..111374- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig813:84694..111374- >mRNA_P-littoralis_Contig813.9.6 ID=mRNA_P-littoralis_Contig813.9.6|Name=mRNA_P-littoralis_Contig813.9.6|organism=Pylaiella littoralis U1_48|type=CDS|length=1764bp|location=Sequence derived from alignment at P-littoralis_Contig813:84694..111374- (Pylaiella littoralis U1_48)back to top |