mRNA_P-littoralis_Contig813.1.11 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig813.1.11 vs. uniprot
Match: D7FJN4_ECTSI (VPS9 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJN4_ECTSI) HSP 1 Score: 1828 bits (4736), Expect = 0.000e+0 Identity = 1144/1765 (64.82%), Postives = 1263/1765 (71.56%), Query Frame = 1
Query: 37 MSGPTPRLPFLTASEEASLRPGPSGRVLGVATAGDFFTLFLRDACEFAGQYHNTLGDRGYEEWPWEEDGQKQYEGSLRKVQFMSPVRNAPELSNETRVDEEQRWVSRGHAQATLEIRRRLPDLRDGRRFVVAVRWVMKFDGFGCTLAVFCGTLFYKPSSYAKEIREGCVRGYALSIKRWFVQAEKYAKSQGHVELRRSNASSLKDGSTGGDAGEEGGSXXXXXXXXXXXXEGEAKKGDGVKLSGRVPVLEAMRSSVGSSNSIQLSKCHRFLGEYIYLTKEIKRVIQGEAAGDLVLEEDLKFGGRGIPIGQEGAGAGLDGLKDGRRSSGPYTAGDMEESSAMSHISVESARSGSWSGSVVGGFGFVDYPAGIPVRQWGRIQDRTVRWLIRSMDGNTNT--MLAAVTSGNRDKEGSVVSGSTAFSGGXXXXXXRGLGRSLTISTSGGGAXXXXXXXG----VGFPGMEGPLSPSVASTREEDVVHAKWLEQLRVVSQRDRKDEKGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSVXXXXXXXXXXXXXXXXLASSDGKTIDDHVDENSVTLSNDPAEDGAG--------------AAGAG----GGRAAAEKPYTVVFHGRRLGIQLRELHKIPIVGGLQGYDPDGTQDGRGEXXXXXXXXXXGADGPPIEVSPEPSAFDELSLSRLGSVSA-TGTGQGADDLQTIYGGSGGAGGGVGTETSSMRDSQSEFDVTVKCIVQCAQLFGEGVKKLWRWKPSAGLTSSGEAVDPSMAVGAFMRGLSLRLGLGEQSRGVRVSYLDMEVGDGEGEYVSLDVEAWDDFLESRFKRLTVGAREGEEDEEAEEKRAKR---EGXXXXXXXXXXXXXPHLEQKAGGGGKRDRSQGGVGYTPAGEAEEKRRYSNAGSG---IVVLSQSSGGDS------PGVGGVEGRR-GXXXXXXXXXYNEAFAGVQEFPDNITVKMQALKGRDFGNKSWDGGSQAGKGARGEDXXXXXXXXXXXXXXXXXXXXXXRSREGGVQEFPDSITAKMQALRGRLSLVTSPLKSSHLFNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---WAVDDDEKAF-AGKGQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTAELSARSTGVSSA---GKMARRPCVGSVLVSVNGVRTQGLSFANVVQLLNTRERPMVLEFVDSWDTIFHSHHMETQAREKISRETFEQKLRHPLAAKLRKQVEEWMSAFRDQDLRAMVAEPQAGDKEQDQGAEDQGPAVMLWSLIRWLEQELPDVGIFNNNHRAGGGLPAMGELQWSDVKQHLERNIFEQVFDRCLTSAPDYGAGDEELTAKLASLRFLRPRHWCVDSLKDT--ESAASYGREWELAQGELCRLVEYRCPLDMLDCVRACVRLVALSVEASLAKRWRGGGGSASSRSGGPRRVALGADDLLPALTWVVVQSNPPRLASRLWFTHYYMRAGAEGMGEGAYCLTQLASALEFASHADASVLADITEDELHEGLEKHQATQSMIKAATEGDSESVSFWLGAGADPNGLSSDQQSTALTAAISHRRRDVIKILLEGPGSEKVDPNERICPNYGLQRRGRSALMVAAAMGDMTTVLALLRMPGVDRRLACSHGKDAVDYAVQHGHLEVASVLLADPAKATLCQAAKAGNLSYVKALLLQGQDPNE-ADCSGQYTPVIAAAFLAHIQV 5187
MSGPT RLPFLTA+EEA LRPGPSGRVLGVATAGDFFTLFLRDA EF+GQYH T+GDRG EEWPWEEDGQ+QYEGSLRKV FMSPVRNAPELSNETRV+EEQRWVSRGHAQATLEIRRRLP+LRDGRRFVVAVRWVMK+DGFGC+LAVFCGTLFYKPSSYAKEIREGCVRGYALS+KRWFVQAEKY K+ G V+LR+S KDG XXXXXX DG K+SGRV +KRVIQGEAAGDLVLEEDLK GG GIPIGQEGAGAGLDGLK+GRR GPY +GD+EESSAMSH++VESARSGSWSGS+VGGFGFVDYPAGIP +QWGRIQDRTVRWLIRSM GNTNT ++AA + +R+ EGSVVSGST+FS G GRS S+ XXXXXXX G PG+EGP SP S RE+DVVHAKWLEQLRVV Q D+K+ X XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX S ++ G V E V+ + + DG G AA G G RAAAEKPYTV+FHGRRLGIQLRE+HKIPIVGGLQGYDPDGTQD RGE DG P+EVSPEPSAFDELSL+RLG++ + G+GADDLQTIYGGSGGAGGG+GTETSSM DSQS++DVTVKCIVQC+QLFGEGVKKLWRWKP A S+ +A DPS+AV AFM+GLS+RLGLGE + GVRVSYLDMEVGDGEGEYVSLDVEAW DFLESRFKRL V E + A+ + +R +G ++ G G + S G G AGE E + S G G + + S SS S P V G G E A +E D ++ + + +G +G+ A+ XXXXXXXXXXXXXXXXX + EG + P SITAKMQ LRGRL+ + P + LF+ W D+DE+ +GKG+ TAELSARSTG S K+ARRPCVGSVLVSVNGVRTQGLSFANVVQLLNTRERPM LE+VDSWDTIFH HHMETQ REKISRETFEQKL HPLA KLRKQVEEWMSAFR+QDLRAMVAEPQ G ++QDQGA+ QGPAVMLWSLIRWLEQELPDVGIFNNNHRAGGGLPAMGELQW+DVKQHLER+IFEQVFDRCLTSAP YG GDEEL AKLASLRFLRPRHWCVDSLKDT ESA SYGREWELAQGELCRLVEYRCPLDMLDCV+ACV+LVALSVEASL KR R SSRSGG + VA GADD+LPALTWVVVQSNPPRLASRLWFTHYYMRAGAEGMGEGAYCLTQLASALEFA HADASVLADI+EDEL+EGLEKH+ATQ++IKAA EGDSESVS+WLGAGADPNGLSSDQQ T LTAAI+HRRR VIKILLEG S+ VDPN +ICPNYG++R GRSALMVAAAMGDM TVL+LLR+PG+DRRLAC++GKDAVDYAVQ GHLEVASVLLADPAKATLCQAAKAGNLSYVKALLLQGQDPN+ +D +GQ+TP+IAAAFLAHI+V
Sbjct: 1 MSGPTQRLPFLTAAEEACLRPGPSGRVLGVATAGDFFTLFLRDASEFSGQYHTTMGDRGLEEWPWEEDGQRQYEGSLRKVHFMSPVRNAPELSNETRVEEEQRWVSRGHAQATLEIRRRLPELRDGRRFVVAVRWVMKYDGFGCSLAVFCGTLFYKPSSYAKEIREGCVRGYALSVKRWFVQAEKYVKAHGAVQLRQS-----KDG------------------XXXXXXXXXXXXRDGKKMSGRV----------------------------------VKRVIQGEAAGDLVLEEDLKIGGAGIPIGQEGAGAGLDGLKEGRRPKGPYMSGDLEESSAMSHVTVESARSGSWSGSIVGGFGFVDYPAGIPPKQWGRIQDRTVRWLIRSMGGNTNTAAVVAATHAASRENEGSVVSGSTSFSAGG--------GRSGRPSSXXXXXXXXXXXXXXXXXAGVPGVEGPPSPGAVSIREDDVVHAKWLEQLRVVWQGDKKEXXXXEGSHQRSSPSSGKEAKQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSVPPEGEEGSGKDSDGVAEAKQDEGAPSSTEQGGG---GVPEEDVSSEENKSGDGDGGGSGDRPVAGVTDPAAAEGALTAGRRAAAEKPYTVLFHGRRLGIQLREMHKIPIVGGLQGYDPDGTQDSRGEDGEDDDGSEEEIDGLPVEVSPEPSAFDELSLARLGTLGGGSAAGRGADDLQTIYGGSGGAGGGMGTETSSMMDSQSDYDVTVKCIVQCSQLFGEGVKKLWRWKP-APAASNDDAADPSVAVSAFMKGLSVRLGLGEDNPGVRVSYLDMEVGDGEGEYVSLDVEAWGDFLESRFKRLLVTVDPPEPGQRADARGGQRPPEDGEATSQGKEGKGSAGSAQEPVLGKGP-ESSSGAAGDDAAGEKEGDNQGSEKGKGDDGVEISSSSSDASSLALGAKPAVQAAAGXXPGRDKRGRDIVVVELGAETEEEGDGSRMESGDTGATEEEEAAGEG---SGEEAQXXXXXXXXXXXXXXXXXXXXEAGPKKVVEG---KKPGSITAKMQVLRGRLNRMAVP-SNFRLFDEHSTSPTSADATEEGEQTSPKEGGMGGADGDSAGPRERGPRGGHGSKHGGIGWGADEDEELDGSGKGRAGGKGEGGPADEDAEEGY-------------TAELSARSTGTGSTVGKPKVARRPCVGSVLVSVNGVRTQGLSFANVVQLLNTRERPMALEYVDSWDTIFHQHHMETQVREKISRETFEQKLLHPLAGKLRKQVEEWMSAFREQDLRAMVAEPQTGSEQQDQGADAQGPAVMLWSLIRWLEQELPDVGIFNNNHRAGGGLPAMGELQWTDVKQHLERHIFEQVFDRCLTSAPVYGRGDEELAAKLASLRFLRPRHWCVDSLKDTDAESAGSYGREWELAQGELCRLVEYRCPLDMLDCVKACVKLVALSVEASLVKRQREL--DPSSRSGGLKPVAFGADDILPALTWVVVQSNPPRLASRLWFTHYYMRAGAEGMGEGAYCLTQLASALEFARHADASVLADISEDELNEGLEKHKATQNLIKAAREGDSESVSYWLGAGADPNGLSSDQQFTVLTAAITHRRRGVIKILLEGAWSDMVDPNRQICPNYGVER-GRSALMVAAAMGDMATVLSLLRIPGIDRRLACANGKDAVDYAVQQGHLEVASVLLADPAKATLCQAAKAGNLSYVKALLLQGQDPNQTSDYTGQFTPIIAAAFLAHIEV 1672
BLAST of mRNA_P-littoralis_Contig813.1.11 vs. uniprot
Match: A0A6H5KV84_9PHAE (VPS9 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KV84_9PHAE) HSP 1 Score: 1404 bits (3635), Expect = 0.000e+0 Identity = 963/1708 (56.38%), Postives = 1074/1708 (62.88%), Query Frame = 1
Query: 199 LGDRGYEEWPWEEDGQKQYEGSLRKVQFMSPVRNAPELSNETRVDEEQRWVSRGHAQATLEIRRRLPDLRDGRRFVVAVRWVMKFDGFGCTLAVFCGTLFYKPSSYAKEIREGCVRGYALSIKRWFVQAEKYAKSQGHVELRRSNASSLKDGSTGGDAGEEGGSXXXXXXXXXXXXEGEAKKGDGVKLSGRVPVLEAMRSSVGSSNSIQLSKCHRFLGEYIYLTKEIKRVIQGEAAGDLVLEEDLKFGGRGIPIGQEGAGAGLDGLKDGRRSSGPYTAGDMEESSAMSHISVESARSGSWSGSVVGGFGFVDYPAGIPVRQWGRIQDRTVRWLIRSMDGNTNT--MLAAVTSGNRDKEGSVVSGSTAFSGGXXXXXXRGLGRSLTISTSGGGAXXXXXXXGVGFPGMEGPLSPSVASTREEDVVHAKWLEQLRVVSQRDRKDEKGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSVXXXXXXXXXXXXXXXX------------LASSDGKTID-DH--VDENSVTLSNDPAEDGAGAAGAGGGRAAAEKPYTVVFHGRRLGIQLRELHKIPIVGGLQGYDPDGTQDGRGEXXXXXXXXXXGADGPPIEVSPEPSAFDELSLSRLGSVSATG-TGQGADDLQTIYGGSGGAGGGVGTETSSMRDSQSEFDVTVKCIVQCAQLFGEGVKKLWRWKPSAGLTSSGEAVDPSMAVGAFMRGLSLRLGLGEQSRGVRVSYLDMEVGDGEGEYVSLDVEAWDDFLESRFKRLTVGA---REGEEDEEAEEKRAKREGXXXXXXXXXXXXXPHLEQKAGGGGKRDRSQGGVGYTPAGEAEEKRRYSNAGSGI--VVLSQSSGGDSPGVGGVEGRRGXXXXXXXXXYNEAFAGVQEFPDNITVKMQALKGRDFGNKSWDGGSQAGKGARGEDXXXXXXXXXXXXXXXXXXXXXXRSREGGVQEFPDSITAKMQALRGRLSLVTSPLKSSHLFNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---WAVDDDEKAF-AGKGQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTAELSARSTGVSSA---GKMARRPCVGSVLVSVNGVRTQGLSFANVVQLLNTRERPMVLEFVDSWDTIFHSHHMETQAREKISRETFEQKLRHPLAAKLRKQVEEWMSAFRDQDLRAMVAEPQAGDKEQDQGAEDQGPAVMLWSLIRWLEQELPDVGIFNNNHRAGGGLPAMGELQWSDVKQHLERNIFEQVFDRCLTSAPDYGAGDEELTAKLASLRFLRPRHWCVDSLKDTESAASYGREWELAQGELCRLVEYRCPLDMLDCVRACVRLVALSVEASLAKRWRGGGGSASSRSGGPRRVALGADDLLPALTWVVVQSNPPRLASRLWFTHYYMRAGAEGMGEGAYCLTQLASALEFASHADASVLADITEDELHEGLEKHQATQSMIKAATEGDSESVSFWLGAGADPNGLSSDQQSTALTAAISHRRRDVIKILLEGPGSEKVDPNERICPNYGLQRRGRSALMVAAAMGDMTTVLALLRMPGVDRRLACSHGKDAVDYAVQHG--------------HLEVASVLLADPAKATLCQAAKAGNLSYVKALLLQGQDPNE-ADCSGQYTPVIAAAFLAHIQV 5187
+GDRG EEWPWEEDGQ+QYEGSLRKV FMSPVRNAPELSNETRV+EEQRWVSRGHAQATLEIRRRLP+LRDGRRFVVAVRWVMK+DGFGC+LAVFCGTLFYKPSSYAKEIREGCVRGYALS+KRWFVQAEKY K+ G V+LR+S KDG XXXXXXXEG G G K SGRVPVLEAMRSSVGSSNSIQLSKCH+FLGEYIYLT+E+KRVIQGEAAGDLVLEEDL GG GIPIGQEGAGAGLDGLK+GRR GPY +GD+EESSAMSH++VESARSGSWSGS+VGGFGFVDYPAGIP +QWGRIQDRTVRWLIRSM GNTNT ++AA + NR+ EGSVVSGST+FS G RG S XXXX G PG+EGP SP S RE+DVVHAKWLEQLRVV Q D+K+E+ XXXXXX XXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXX ++S + ++ D DH + V DPA A A G RAAAEKPYTV+FHGRRLGIQLRE+HKIPIVGGLQGYDPDGTQD RGE DG P+EVSPEPSAFDELSL+RLG++ G+GADDLQTIYGGSGGAGGG+GTETSSM DSQS++DVTVKCIVQC+QLFGEGVKKLWRWKP A SS EA DPS+AV AFM+GLS+RLGLGE + GVRVSYLDMEVG GEGEYVSLDVEAW DFLESRFKRL V + G+ D+ E+R+ +G ++ G + S G G A E S G G V +S SS SP G + XXXX G D + V++ A + + G GA E+ XXXXXXXXX XX ++ G ++ PDSITAKMQ LRGRL+ + P + LF+ W D+DE+ +GKG TAELSARSTG S K+ RRPCVGSVLVSVNGVRTQGLSFANVVQL+NTRERPM LEFVDSWDTIFH HHMETQ VGIFNNNHRAGGGLPAMGELQW+DVKQHLER+IFEQ A E+ A L +DS D ESA SYGREWELAQGELCRLVEYRCPLDMLDCV+ACV+LVALSVEASL KR R SSRSGG + VA GADD+LPALTWVVVQ A T ++A EG D+ + I+E+ G AT + SESVS+WLGAGADPNGLSSDQQST LTAAI+HRRR VIKILLEG S+ VDPN +ICPNYG+ R GRSALMVAAAMGDM TVL+LLR+PG+DRRLAC++GKDAVDYAVQ G HLEVASVLLADPAKATLCQAAKAGNLSYVKALLLQGQDPN+ +D +GQYTP+IAAAFL HI+V
Sbjct: 1 MGDRGLEEWPWEEDGQRQYEGSLRKVHFMSPVRNAPELSNETRVEEEQRWVSRGHAQATLEIRRRLPELRDGRRFVVAVRWVMKYDGFGCSLAVFCGTLFYKPSSYAKEIREGCVRGYALSVKRWFVQAEKYVKAHGAVQLRQS-----KDG-----------------XXXXXXXEG----GYGKKTSGRVPVLEAMRSSVGSSNSIQLSKCHKFLGEYIYLTREVKRVIQGEAAGDLVLEEDLTIGGAGIPIGQEGAGAGLDGLKEGRRPKGPYMSGDLEESSAMSHVTVESARSGSWSGSIVGGFGFVDYPAGIPPKQWGRIQDRTVRWLIRSMGGNTNTAAVVAATHAANRENEGSVVSGSTSFSAGGG----RGGRPSSLXXXXXXXXVGKXXXXXAGVPGVEGPPSPGAVSIREDDVVHAKWLEQLRVVWQGDKKEEEEGKQQRPSPSSCKEAXXXXXXSTDEIDKTTSKEGEDSKDKSEDGDTDTAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPEQEVSSEEKQSGDGDHGGSGDKPVAGVTDPAA--AEVALTAGRRAAAEKPYTVLFHGRRLGIQLREMHKIPIVGGLQGYDPDGTQDSRGEDGEDDGGSEEEIDGLPVEVSPEPSAFDELSLARLGTLGGGSIAGRGADDLQTIYGGSGGAGGGMGTETSSMMDSQSDYDVTVKCIVQCSQLFGEGVKKLWRWKP-APAASSDEAADPSVAVSAFMKGLSVRLGLGEDNPGVRVSYLDMEVGGGEGEYVSLDVEAWGDFLESRFKRLLVTVDPLKTGQSDDARGEQRSPEDGEAISNGKKGKGSTGSAQEPVLGKVP-ESSSGAAGDDAAXEXXXXXXXSEKGKGDDGVEISLSS---SPASSSALGAQPAVEAAXXXXXXXXXXGK----DIVVVELGAETEEEGDGSRLESGDT---GATEEEEAGXXXXXXXXXEAKEKGGKXXGPKKDGERKEPDSITAKMQVLRGRLNRMAVP-SNFRLFDEHSTSPTSADATEEGEQTSPKGGGMGGADGDSAGLPGRGARGGDRSKRGGGXWGADEDEELDGSGKGHAGGKGEGGPADEDAEEGY-------------TAELSARSTGTGSTVGKPKVVRRPCVGSVLVSVNGVRTQGLSFANVVQLINTRERPMALEFVDSWDTIFHQHHMETQ------------------------------------------------------------------------------VGIFNNNHRAGGGLPAMGELQWTDVKQHLERHIFEQ-------------ASGEQGQDNKAHL---------IDSAADVESAGSYGREWELAQGELCRLVEYRCPLDMLDCVKACVKLVALSVEASLVKRQREL--DPSSRSGGLKPVACGADDILPALTWVVVQGLEKHKA-----TQNLIKAAREG---------------------DSCIGVAISEEGNCVGRRFAAATSNPSCPQNMNGSESVSYWLGAGADPNGLSSDQQSTVLTAAITHRRRGVIKILLEGAWSKMVDPNRQICPNYGVDR-GRSALMVAAAMGDMATVLSLLRIPGIDRRLACANGKDAVDYAVQQGEKKRDLKEKAAAGGHLEVASVLLADPAKATLCQAAKAGNLSYVKALLLQGQDPNQTSDYTGQYTPIIAAAFLGHIEV 1521
BLAST of mRNA_P-littoralis_Contig813.1.11 vs. uniprot
Match: A0A835YQM7_9STRA (VPS9 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQM7_9STRA) HSP 1 Score: 568 bits (1464), Expect = 1.750e-164 Identity = 334/663 (50.38%), Postives = 411/663 (61.99%), Query Frame = 1
Query: 3505 RSTGVSSAGKMARRPCVGSVLVSVNGVRTQGLSFANVVQLLNTRERPMVLEFVDSWDTIFHSHHMETQAREKISRETFEQKLRHPLAAKLRKQVEEWMSAFRDQDLRAMVAEPQAGDKEQDQGAEDQGPAVMLWSLIRWLEQELPDVGIFNNNHRAGGGLPAMGELQWSDVKQHLERNIFEQ-----------VFDRCLTSAPDYGAGDEELTAKLASLRFLRPRHWCVDSLKDTESAASYGREWELAQGEL--------------------CRLVEYRCPLDMLDCVRACVRLVALSVEAS-LAKR------WRGGGGSASSRSGGPRRVALGADDLLPALTWVVVQSNPPR----------------------------------------------------LASRLWFTHYYMRAG-AEGMGEGAYCLTQLASALEFASHADASVLADITEDELHEGLEKHQATQSMIKAATEGDSESVSFWLGAGADPNGLSSDQQSTALTAAISHRRRDVIKILLEGPGSEKVDPNERICPNYGLQRRGRSALMVAAAMGDMTT------VLALLRMPGVDRRLACSHGKDAVDYAVQHGHL-----------EVASVLLADPAKATLCQAAKAGNLSYVKALLLQGQDPNEADCSGQYTPVIAAAF 5169
R+TG++ G+ R PCVG+VLVSVNGVRTQGLSF NV+ LL+T++RP+VLEFVDSWD IFH+HH+ET+ R+KI++ETFE KL HP+A++LRKQ+ EWM AF DQDL+A G +D A P VMLWSL+RW EQEL +G+FNN+H+AGGGLP MG+LQW DVK HLER+IF+ VF+RCLT+AP+Y GD + +LASLRFLRPRHWCVDSL D YGREWELAQ EL CR+V Y+CP D++ C+RACVRLVALSVEAS L KR + +S + + V GADDLL ALTWVVVQ+NPP LASR+WF Y+MR EG+GEG YCLTQLASA+EFA DASVLADITE+EL G+ H TQ+MI+A+ G+++ + L G DPNGLS+DQQ+TALTAA+ DV+K+LLE DPN +CPNYG RGR+ALM+AA G + VL LLR GV+R + C+ G AVDYA+Q GH EVAS+LLADP + L QA AG L YV+ALL QG D N D +GQ+TP+I AA
Sbjct: 1852 RATGLAH-GEGERAPCVGAVLVSVNGVRTQGLSFQNVIDLLHTQQRPLVLEFVDSWDAIFHTHHLETEMRQKITKETFELKLSHPIASRLRKQIAEWMEAFLDQDLQAQCE--LYGPDSKDSRA----PPVMLWSLVRWTEQELQGLGVFNNSHKAGGGLPVMGDLQWRDVKHHLERHIFDMLLXXXXXXXXXVFERCLTAAPEYAEGDAAIAYRLASLRFLRPRHWCVDSLDD---GGGYGREWELAQRELXXXXXXXXXXXXXXXXXXXXCRIVHYKCPRDLMGCIRACVRLVALSVEASMLPKRITRLVDFCVALSVEASMAKRQKSVVFGADDLLAALTWVVVQANPPSAFXXXXXXXXXXXXYLGGEGDVDHVLREKNAPKRREAVGKPQTVDKSKQFYWLASRMWFMAYFMRQDDPEGIGEGGYCLTQLASAMEFAKECDASVLADITEEELESGIRAHATTQAMIEASLAGNAQRAAELLREGGDPNGLSTDQQNTALTAAVLGSHLDVMKVLLE---HRSTDPNVTVCPNYG-PNRGRTALMLAAQRGSLDERGSLDEVLLLLRRGGVNRGVTCAEGLKAVDYALQGGHKASLLSAAILTSEVASILLADPDRVGLTQAVAAGALPYVRALLRQGCDANAVDATGQFTPLIVAAL 2500
BLAST of mRNA_P-littoralis_Contig813.1.11 vs. uniprot
Match: A0A7S3NHB6_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NHB6_9STRA) HSP 1 Score: 194 bits (494), Expect = 4.580e-46 Identity = 182/638 (28.53%), Postives = 284/638 (44.51%), Query Frame = 1
Query: 3547 PCVGSVLVSVNGVRTQGLSFANVVQLLNTRERPMVLEFVDSW--------------DTIFHSHHMETQAREKISRETFEQKLRHPLAAKLRKQVEEWMSAFRDQDLRAMVAEPQAGDKEQDQGAEDQGPAVMLWSLIRWLEQELPDVGIFNNNH-----RAGGGLPAMGELQ--------WSDVKQHLERNIFEQVFDRCLTSAPDY-GAGDEELTAKLASLRFLR----------------PRHWCVDSLKDTE--------SAASYGREWELAQGELCRLVEYRCPLDMLDCVRACVRLVALSVEASLAKRWRGGGGSASSRSGGPRRV--ALGADDLLPALTWVVVQSNPPRLASRLWFTHYYMRAGAEGMGEGAYCLTQLASALEFASHA--DASVLAD-ITEDELHEGLEKHQATQSMIKAATEGDSESVSFWLGAGADPNGLSSDQQSTALTAAISHRRRDVIKILL-----------------------------EGPGSEKVDPNERICPNYGLQRRGRSALMVAAAMGDMTTVLALLRMPGVDRRLACSHGKDAVDYAVQHGHLEVASVLLAD-------PAKATLCQAAKAGNLSYVKALLLQGQDPNEADCSGQYTPVIAAAFLAHI 5181
P +G+ LVS+NGVRT GLSFA + LL +RP+ + FV++ + I ++ + E + ++ ++ + P A KLR+Q++E++ +F DLR + QA K P M WS + + + L D G+ R+ GG+ A G + W+DV++H+E+ I ++F+ + ++P+ GDE L+ LA LRFLR +D K+ + + G EW +AQ EL + + R P + LD + + VR +A +VEA S G P A+GAD+LLPA+TW V+Q+NPPRLAS LWF Y R E Y L++A+ FA D L I++D+ +G++ TQ + AA + D+ + L AGAD +G S DQ +T L AAI + + + L + ++ P R+G +ALMVAAA+G+ V LL + G D + G+ A A G+L+ A L P L A A +++ + LLL+G D N+ P++AAA +
Sbjct: 406 PGIGAALVSINGVRTAGLSFAASMALLEKAKRPINIAFVEATPDQLADSLGFFGDENNILNTTNNEQETIKRCKESDVDRAIADPAAIKLREQLDEFVHSFHKCDLRQL--HKQANKK----------PGSMFWSAVDFAVRFLKDKGLLGGPRTIPPGRSRGGI-ASGSSRTEEKEASFWADVRRHIEKKIMARIFEAIMQASPEARNKGDEALSLHLARLRFLRLADLGVVTKIRSSSKNDEATPIDDAKEEQIPMQEERNTPVEEGAEWVVAQYELFEVAQSRTPSEALDRLASSVRFIASAVEAC-------------SNRGRPLAAYNAIGADELLPAITWTVIQANPPRLASMLWFIDEYARDDML-RAEYGYAYANLSAAVNFARETLVDVKPLEGLISKDDFDKGVKTAHLTQKAVDAALKKDARQLRLLLAAGADVSGPSVDQSTTPLVAAIESKEPECVAAALAYLASXXXXXXXXXXXXXXXXXXRVAAATNNQSQAHIRSSQVDAPINRGSRQGMTALMVAAALGETDAVCGLLAL-GADPERVDARGRSAGHLARDAGYLDCAEALDCGSPTDPDFPDTNPLVYRALA-DVATTRGLLLRGADVNKTCGLLGCPPIVAAAAAGDV 1014
BLAST of mRNA_P-littoralis_Contig813.1.11 vs. uniprot
Match: F0Y064_AURAN (VPS9 domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y064_AURAN) HSP 1 Score: 186 bits (472), Expect = 1.570e-43 Identity = 175/566 (30.92%), Postives = 255/566 (45.05%), Query Frame = 1
Query: 3547 PCVGSVLVSVNGVRTQGLSFANVVQLLNTRERPMVLEFVDSWDTIFHSHHMETQAREKISRETFEQKLRHPLAAKLRKQVEEWMSAFRDQDLRAMVAEPQAGDKEQDQGAEDQGPAVMLWSLIRWLEQELPDVGIFNNNH--------------RAGGGLPAMGELQWSDVKQHLERNIFEQVFDRCLTSAPDYGAGDEELTAKLASLRFLRPRHWCVDSLKDTESAASYGREWELAQGELCRLVEYRCPLDMLDCVRACVRLVALSVEASLAKRWRGGGGSASSRSGGPRRVALGADDLLPALTWVVVQSNPPRLASRLWFTHYYMRAGAEGM-GEGAYCLTQLASALEFASH---ADASVLADITEDELHEGLEKHQATQSMIKAATEGDSESVSFWLGAGADPNGLSSDQQSTALTAAISHRRRDVI-----KILLEGPGSEKVDPNERICPNYGLQRR--GRSALMVAAAMGDMTTVLALLRMPGVDRRLACSHGKDAVDYAVQHGHLEVASVLL-ADPAKATLCQAAKAGNLSYVKALLLQGQDPNEADCSGQYTPVIAAA 5166
P VGS L SVNGVR GL+F + + L R+RP+ L F+++ + +A + L P A LR Q++ +++ F DLR G DQ P M + + +L + + + R + W+ ++ +E + +V D +P+ GAGD+EL SLR SA G EW +AQ E+ R D +D VR +A +VEA + G + S A+GAD+LLPA+TW ++Q++ LAS LWF + AGA+ + GE Y + +A +FA + A + I D +G+ + T + AAT GD + L AGADP GL S +T L+AAI R RD I ++ +EG + D E C + R G +ALMVAA++GD+ VLALL + R A + G+ A A GH VA VL A P A L +A G+ + V+ LLL+G DP A G P++AAA
Sbjct: 385 PGVGSALTSVNGVRVGGLTFQSAMALAGQRKRPLALGFLEATPDALVDTLLVERAAGGCDARAVDAALAAPGAKDLRAQLDAFVANFNAADLRRCAY---VGG--------DQRPGAMFRRAVDFAVDQLREKRLLASGSPQPQQNKTAALRVSRRDDDAEERDDAYWASCRKVVETRLAARVADAAWGLSPEAGAGDDELRVHFHSLR----------------SAPEDGAEWRVAQLEVEAACAARTAGDAVDRFATAVRFIASAVEACSNR-----GRTLQCYS------AIGADELLPAITWTLIQADARTLASTLWFVDEF--AGADDLRGERGYAFANVQAASDFARKTLTSAAPLEGLIAPDAFDQGVRRAVLTDEAVAAATRGDGSKLGLVLAAGADPLGLGSGLDATPLSAAIVSRDRDAIAKCLGRLSIEGASNGADDRVELECHDVDNARPSDGATALMVAASVGDLDVVLALLALGADGNRRADATGRTAARRARDGGHDAVAEVLACAAPTPAALLRACAVGDAAAVRGLLLRGADP--AAKVGGCPPLVAAA 908
BLAST of mRNA_P-littoralis_Contig813.1.11 vs. uniprot
Match: A0A7S4EBV3_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4EBV3_9STRA) HSP 1 Score: 125 bits (313), Expect = 7.580e-25 Identity = 153/564 (27.13%), Postives = 237/564 (42.02%), Query Frame = 1
Query: 3547 PCVGSVLVSVNGVRTQGLSFANVVQLLNTRERPMVLEFVDSW-----DTIFHSHHMETQAREKISRETFEQKLRHPLAAKLRKQVEEWMSAFRDQDLRAMVAEPQAGDKEQDQGAEDQGPAVMLWSLIRWLEQELPDVGIFNNNHRAGGGLPAMGELQ--------WSDVKQHLERNIFEQVFDRCLTSAPDYGAGDEELTAKLASLRFLRPRHWCVDSLKDTESAASYGREWELAQGELCRLVEYRCPLDMLDCVRACVRLVALSVEASLAKRWRGGGGSASSRSGGPRRVA---LGADDLLPALTWVVVQSNPPRLASRLWFTHYYMRAGAEGMGEGAYCLTQLASALEFASHA--DASVLADITEDELHE-GLEKHQATQSMIKAATEGDSESVSFWLGAGADPNGLSSDQQSTALTAAISHRRRDVIKILLEGPGSEKVDPNERICPNYGLQRRGRSALMVAAAMGDMTTVLALLRMPGVDRRLACSHGKDAVDYAVQHGHLEVASVLLA--DPAKATLCQAAKAGNLSYVKALLLQGQDPNEADCSGQYTPVIAAAFLA 5175
P +GS LV+V+GVR GL+FA LLN RP+ L F D + S +T + E+ ++ A LRK+++ + +F DL + G + W R + L + + R G L + E + W + +ER + D L +P GD+EL L LRFLR H V + + ++ G EW +A EL + ++LD V C R A + E R+ G R A +GADD++P+LT+V +++NP RL + LWF Y + + GE Y L A++FAS A+ L + DE + G+ AA GD+++ L AG D + + + L AAI + + ++ ++ D N + R GR+ALM +AA+G + ALLR G D G+ A A +H VLL+ P + AA ++ ++ALL +G + + AD G P + AA A
Sbjct: 328 PSLGSRLVAVDGVRVGGLAFAGAAALLNREARPLRLAFSSPAPDTLADALLASD--DTASPERAVAAALDK------AKALRKRLDGFGESFSKSDL------TEDGQRR-------------FWGTCRGAVRSLREAKLLKPLQRDDGVLKNLREKEEEDEDDEFWERCEAAVERRLMPSCVDALLNLSP---GGDDELAVTLGRLRFLRLEHLGVSAPGEADN--DIGGEWAVAVEELRATDNAQSVSEVLDRVAQCCRFAAAAAE--------------KVRNKGRRLEAYENVGADDVVPSLTYVAIRANPRRLVTTLWFVETYA-SSYQLRGERGYAAASLRVAVDFASQQLRSAAPLEGLISDEAFKSGVRAAALVDEACAAAGRGDAKAFRLLLAAGVDVSAPDARCVVSPLIAAIEGQ------VCVDEALAKVSDVNATL-------RDGRTALMASAAVGAASVCAALLRK-GADASKRDVKGRTAFMVA-RH---RATRVLLSCGPPTDEAVVAAASKADVDVLRALLAKGGNADAADAKG--CPALVAACAA 824
BLAST of mRNA_P-littoralis_Contig813.1.11 vs. uniprot
Match: A0A836C806_9STRA (VPS9 domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C806_9STRA) HSP 1 Score: 90.1 bits (222), Expect = 5.540e-15 Identity = 67/199 (33.67%), Postives = 90/199 (45.23%), Query Frame = 1
Query: 3997 ELQWSDVKQHLERNIFEQVFDRCLTSAPDYGAGDEELTAKLASLRFLRPRHWCVDSLKDTESAASYGREWELAQGELCRLVEYRCPLDMLDCVRACVRLVALSVEASLAKRWRGGGGSASSRSGGPRRVAL---GADDLLPALTWVVVQSNPPRLASRLWFTHYYMRAGAEGMGEGAYCLTQLASALEFASHADASVLA 4584
E QW+D + LER + +++D A D A D +L SL F+ H + L A+ +W + L RL R P D L CV AC VA + +L G GAD+LLPAL ++V +NPPRLAS L + + G +Y LTQLASAL F +ADA L+
Sbjct: 191 EPQWADTVESLERLVMYKLYDVTFRLAAD-DARDAATALRLQSLSFVGFEHLDMAPLVSGAGASHADLDWSAPRAHLLRLDGLRSPGDKLACVLACFDAVADVLRRALGADDEDGSSXXXXXXXXXXXXXXREPGADELLPALIYLVKSTNPPRLASNLEYLQTFAAPERLVAGRASYALTQLASALHFLENADAGALS 388
BLAST of mRNA_P-littoralis_Contig813.1.11 vs. uniprot
Match: Q7ZVP0_DANRE (RAB guanine nucleotide exchange factor (GEF) 1 n=3 Tax=Danio rerio TaxID=7955 RepID=Q7ZVP0_DANRE) HSP 1 Score: 66.2 bits (160), Expect = 3.580e-7 Identity = 51/210 (24.29%), Postives = 88/210 (41.90%), Query Frame = 1
Query: 3979 GLPAMGELQWSDVKQHLERNIFEQVFDRCLTSAPDYGAGDEELTAKLASLRFLRPRHWCVDSLKDT---ESAASYGREWELAQGELCRLVEYRCPLDMLDCVRACVRLVALSVEASLAKRWRGGGGSASSRSGGPRRVALGADDLLPALTWVVVQSNPPRLASRLWFTHYYMRAGAEGMGEGAYCLTQLASALEFASHADASVLADITED 4599
G P + E +V++++ ++EQ+F PD+ +++ L + +R HW ++ E E A+ +L L + P + L CV C + + +++ G ++ A ADD LPAL ++++++NPPRL S + + Y GE Y T L A+ F DA L ED
Sbjct: 192 GSPEVVETVMEEVERYVMGRLYEQLF------CPDHTDDEKK---DLTVQKRIRALHWVSIAMLCVPLDEQIPKVSDSVERAKTDLINLDSKKVPKEKLACVTRCSKHILTAIQ-------------------GSKKAAASADDFLPALVYIILKANPPRLHSNIQYITRYCNPSRLMSGEDGYYFTNLCCAVSFIEKLDAQSLNLSPED 373
BLAST of mRNA_P-littoralis_Contig813.1.11 vs. uniprot
Match: A0A2R5GH95_9STRA (GTPase-activating protein and VPS9 domain-containing protein 1 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GH95_9STRA) HSP 1 Score: 66.2 bits (160), Expect = 5.000e-7 Identity = 57/203 (28.08%), Postives = 91/203 (44.83%), Query Frame = 1
Query: 3997 ELQWSDVKQHLERNIFEQVFDRCLTSAPDYGAGDEELTAKLASLRFLRPRHWCVDSLKDTESAASYGR----EWELAQGELCRLVEYRCPLDMLDCVRACVRLVALSVEASLAKRWRGGGGSASSRSGGPRRVALGADDLLPALTWVVVQSNPPRLASRLWFTHYYMRAGAEGMGEGAYCLTQLASALEFASHADASVLADIT 4593
E W+ + LE+ + ++ + D+ L ++ SL F+R H V +GR +W+ A EL ++ E++ P D + CV RL+ SS G R+ GADDLLPAL +V+++ NP + S + + + R A GE Y TQLASA F D+S+L+ ++
Sbjct: 336 EEAWAATCEALEKFVLLKLHGAFFCATDRERTLDQALCDRIKSLTFVRASHLDVHH---------FGRNNLEQWQKAGSELAKMNEFKSPRDKVICVLNACRLL-------------------SSLLGDDGRLP-GADDLLPALIFVLLKENPRNVHSNVSYIASF-RNPARLKGEAGYFFTQLASAAAFVQTLDSSMLSSVS 508
BLAST of mRNA_P-littoralis_Contig813.1.11 vs. uniprot
Match: A0A3B4BX84_PYGNA (Rab5 GDP/GTP exchange factor-like n=3 Tax=Serrasalmidae TaxID=42495 RepID=A0A3B4BX84_PYGNA) HSP 1 Score: 63.2 bits (152), Expect = 3.590e-6 Identity = 63/237 (26.58%), Postives = 99/237 (41.77%), Query Frame = 1
Query: 3979 GLPAMGELQWSDVKQHLERNIFEQVFDRCLTSAPDYGAGDEELTAKLASLRFLRPRHWCVDSLKDTESAASYGREWELAQGELCRLVEYRCPLDMLDCVRACVRLVALSVEASLAKRWRGGGGSASSRSGGPRRVALGADDLLPALTWVVVQSNPPRLASRLWFTHYYMRAGAEGMGEGAYCLTQLASALEFASHADASVLADITEDELHEGLEKHQATQ-SMIKAATEGDSESVSF 4686
G P E+ +V+++L +++EQ F C SA D D + ++ +L ++ + CV E + + A ++ + R P D L V C + + +++ S +R A ADD LPAL +VV+++NPPRL S + + + GE Y T L A+ F DA L ED E + + Q S K GDS S S
Sbjct: 203 GTPDRVEVIMDEVEKYLMLHLYEQAF--CPESADDE-VKDLAIQNRIRALHWVTVQMLCVPL---NEEIPAVSDSLDKAITDIIEMDSKRVPKDKLGYVTRCSKHIFSAIKRS-------------------KREAASADDFLPALIYVVLKANPPRLQSNIQYITRFCNPSRLMSGEDGYYFTNLCCAVAFIEKLDAQSLNLSPED-----FELYMSGQASPNKVQDPGDSSSSSL 409 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig813.1.11 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig813.1.11 >prot_P-littoralis_Contig813.1.11 ID=prot_P-littoralis_Contig813.1.11|Name=mRNA_P-littoralis_Contig813.1.11|organism=Pylaiella littoralis U1_48|type=polypeptide|length=1729bp LCSSKFNNCKWAMSGPTPRLPFLTASEEASLRPGPSGRVLGVATAGDFFTback to top mRNA from alignment at P-littoralis_Contig813:1993..45051- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig813.1.11 ID=mRNA_P-littoralis_Contig813.1.11|Name=mRNA_P-littoralis_Contig813.1.11|organism=Pylaiella littoralis U1_48|type=mRNA|length=43059bp|location=Sequence derived from alignment at P-littoralis_Contig813:1993..45051- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig813:1993..45051- >mRNA_P-littoralis_Contig813.1.11 ID=mRNA_P-littoralis_Contig813.1.11|Name=mRNA_P-littoralis_Contig813.1.11|organism=Pylaiella littoralis U1_48|type=CDS|length=5187bp|location=Sequence derived from alignment at P-littoralis_Contig813:1993..45051- (Pylaiella littoralis U1_48)back to top |