mRNA_P-littoralis_Contig812.15.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig812.15.1
Unique NamemRNA_P-littoralis_Contig812.15.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig812.15.1 vs. uniprot
Match: A0A6H5JUK2_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUK2_9PHAE)

HSP 1 Score: 271 bits (694), Expect = 7.980e-86
Identity = 157/367 (42.78%), Postives = 198/367 (53.95%), Query Frame = 1
Query:    7 WYYKFLKRHRFSIRRKTSVGQKKPEGWEGKAWAFIQQLRSILLRHAKE----------------AED------------VFKLLYNIDQTPIQAEMPQETTIAKTGAKDARIATGGKEKLRYTVVLSVRGDGDEVKPRIIYKGTPFF------------------------------DYPAGGVGLGVQKASWCDTTQTDAWLTEEFMRRPG-ASGFS*PASILTLDDFKCHKDEAFQQKLASKAKTEAVMIPGGLTPVVQPLDRSINKEFKRGMRAKYTHWVKDEFDRNGPGKAVAPSRGVVATWVKDVWANISVKTILS-----------------------------CFKVCGLTLNLDGSEDH 843
            WY +F KR+ FSIRR+TSVGQK P+G+EG AWA + +LR  L+R A E                 ED            VFK L N+DQTP+Q EMP ETT+ KTGAKDARI+TGGKEK R+T+VL+V  DG +V PRII+KGTPF                               D+PA G+  GVQ+ SW D  + + W++  +  RP   S       IL LDDFKCHKDE +   L   A T  ++IPGGLTP++QPLDR +NK+ KR +R KYT +          GK   P RGVV+TW K+ W +I+ +T+ S                             CFK+CGLTL LDGSEDH
Sbjct:   34 WYQRFRKRNGFSIRRRTSVGQKLPKGYEGMAWATVMKLREALVRRAGEIYARRHPPAPDESPIKGEDLTFEQLASVEAEVFKELGNMDQTPVQHEMPVETTLEKTGAKDARISTGGKEKERFTLVLAVMADGKKVSPRIIFKGTPFIPPAVSGKGKSTLPRKNSVAWEIHPANRAKHDHPANGMSFGVQEKSWSDQRECNGWISGSWKLRPNNGSIVQQRPCILVLDDFKCHKDEGYIAALKRDANTIVIVIPGGLTPLLQPLDRMLNKQMKRLLRGKYTAYSASAVADARSGKLKPPERGVVSTWCKEAWESITPETVSSVRKERFALGDVRAWSGENPACSVXETVKTCFKICGLTLALDGSEDH 400          
BLAST of mRNA_P-littoralis_Contig812.15.1 vs. uniprot
Match: A0A6H5K6L9_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6L9_9PHAE)

HSP 1 Score: 269 bits (687), Expect = 3.510e-84
Identity = 150/338 (44.38%), Postives = 192/338 (56.80%), Query Frame = 1
Query:    7 WYYKFLKRHRFSIRRKTSVGQKKPEGWEGKAWAFIQQLRSILLRHAKE----------------AED------------VFKLLYNIDQTPIQAEMPQETTIAKTGAKDARIATGGKEKLRYTVVLSVRGDGDEVKPRIIYKGTPF------------------------------FDYPAGGVGLGVQKASWCDTTQTDAWLTEEFMRRPG-ASGFS*PASILTLDDFKCHKDEAFQQKLASKAKTEAVMIPGGLTPVVQPLDRSINKEFKRGMRAKYTHWVKDEFDRNGPGKAVAPSRGVVATWVKDVWANISVKTILSCFKVCGLTLNLDGSEDH 843
            WY +F KR+ FSIRR+TSVGQK P+G EG AWA + +LR  L++ A E                 ED            VF+ L N+DQTP+Q E+P ETT+ KTGAKDARI+TGGKEK R+T+VL+V  DG +V PRII+KGTPF                                +PA G+  GVQ+ SW D  + + W++  +  RP   S       IL LDDFKCHKDE F   L   A T  + IPG LTP++QPLDR +NK+ KR +R KYT +          GK   P RGVV+TW K+ W + + +T+ +CF +CGLTL LDGSEDH
Sbjct:   34 WYQRFRKRNGFSIRRRTSVGQKLPKGDEGMAWATVMKLREALVKRAGEIYARRHPPAPDESPIKGEDLTSEQLASVEAEVFEELGNMDQTPVQHEIPVETTLEKTGAKDARISTGGKEKERFTLVLAVMADGKKVSPRIIFKGTPFTPPTVSGKGKSTLPRKNSVAWEIHPANRAKHGHPANGMSFGVQEKSWSDQRECNGWISGSWKLRPNNGSIVQQRPCILVLDDFKCHKDEGFIAALKRDANTIVIFIPGRLTPLLQPLDRMLNKQMKRLLRRKYTAYSASAVADARSGKLKPPERGVVSTWCKEAWESSTPETVKTCFMICGLTLALDGSEDH 371          
BLAST of mRNA_P-littoralis_Contig812.15.1 vs. uniprot
Match: A0A6H5KE45_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KE45_9PHAE)

HSP 1 Score: 261 bits (666), Expect = 7.370e-80
Identity = 154/367 (41.96%), Postives = 194/367 (52.86%), Query Frame = 1
Query:    1 KRWYYKFLKRHRFSIRRKTSVGQKKPEGWEGKAWAFIQQLRSILLRHAKE----------------------------AEDVFKLLYNIDQTPIQAEMPQETTIAKTGAKDARIATG--------------------------GKEKLRYTVVLSVRGDGDEVKPRIIYKGTPFFD------------------------------YPAGGVGLGVQKASWCDTTQTDAWLTEEFMRRPG-ASGFS*PASILTLDDFKCHKDEAFQQKLASKAKTEAVMIPGGLTPVVQPLDRSINKEFKRGMRAKYT-HWVKDEFDRNGPGKAVAPSRGVVATWVKDVWANISVKTILSCFKVCGLTLNLDGSEDH 843
            K WY +F KR++FSIRR+TSVG + P+G EG AWA + +LR  LL  A E                             +++FK L N+DQTP+Q EMP ETT+ KTGAKDARIATG                          GKEK R+T+ L+V  DG +V  RII+KGTPF                                 P GG+  GVQ+ SWCD  +   W+ + +  RP   S       IL LDDFKCHKD+ F   L  +A T  + IPGGLTP++QPLDR +NK+ KR +R  YT H  K   D    GK   P RG VATW K+ WA+I+ +T+ +CFK+CGLTL LDGSEDH
Sbjct:  119 KSWYQRFRKRNKFSIRRRTSVGIRLPKGHEGMAWATLMKLRKALLERAGEIYAQRYPPAPGESPIRGEDLSSSQLELVTDELFKDLGNMDQTPVQYEMPVETTLEKTGAKDARIATGAGVCCIRTILKPLPYPPTSCILPPPPGKEKERFTLCLAVSADGTKVPLRIIFKGTPFVPPATPGKGKATQPRKNSIAWEVLPANRSKHGLPVGGMSFGVQEKSWCDLREYKLWIKDSWKLRPNNGSVVRQRRCILVLDDFKCHKDDGFIAALKREANTIVIFIPGGLTPLLQPLDRMLNKQMKRLLRGMYTAHTAKAARDPK-TGKLAPPGRGAVATWCKNAWASITPETVKTCFKICGLTLALDGSEDH 484          
BLAST of mRNA_P-littoralis_Contig812.15.1 vs. uniprot
Match: A0A6H5JTG5_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTG5_9PHAE)

HSP 1 Score: 261 bits (667), Expect = 1.300e-79
Identity = 147/346 (42.49%), Postives = 188/346 (54.34%), Query Frame = 1
Query:    7 WYYKFLKRHRFSIRRKTSVGQKKPEGWEGKAWAFIQQLRSILLRHAKE----------------AED------------VFKLLYNIDQTPIQAEMPQETTIAKTGAKDARIATGGKEKLRYTVVLSVRGDGDEVKPRIIYKGTPFFD------------------------------YPAGGVGLGVQKASWCDTTQTDAWLTEEFMRRPGASGFS*PAS---------ILTLDDFKCHKDEAFQQKLASKAKTEAVMIPGGLTPVVQPLDRSINKEFKRGMRAKYTHWVKDEFDRNGPGKAVAPSRGVVATWVKDVWANISVKTILSCFKVCGLTLNLDGSEDH 843
            WY +F KR+ FSIRR+ SVGQK P+G+EG AWA + +LR  L++ A E                 ED            VF+ L N+DQTP+Q EMP ETT+  TG KDARI+TGGKEK R+T+VL+V  DG  V P II+KGTPF                                +PA G+  GVQ+ SW    + + W+   +   P       P +         IL LDDFKCHKDE F   L   A T  + IPGGLTP++QPLDR +NK+ KR +R KYT +          GK   P RGVV+TW K+ W  ++ +T+ +CFK+CGLTL LDGSEDH
Sbjct:  188 WYQRFRKRNGFSIRRRASVGQKLPKGYEGMAWATVTKLREALVKRAGEIYARRHPPAPDESPIKGEDLTSEQPASVEAEVFEELGNMDQTPVQHEMPVETTLEDTGGKDARISTGGKEKERFTLVLAVMADGKMVSPCIIFKGTPFIPPTVSGKGKSTLPRKNSVAWEVHPANRAKHGHPANGMSFGVQEKSWSGQQECNGWIPGSWKLCPNNGSMXRPNNGSIVQQRPCILVLDDFKCHKDEGFIAALNRDANTIVIFIPGGLTPLLQPLDRMLNKQMKRLLRGKYTAYSAPAVADARSGKLKPPERGVVSTWCKEAWEFVTSETVNTCFKICGLTLALDGSEDH 533          
BLAST of mRNA_P-littoralis_Contig812.15.1 vs. uniprot
Match: A0A6H5JHT8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHT8_9PHAE)

HSP 1 Score: 261 bits (667), Expect = 5.490e-79
Identity = 147/339 (43.36%), Postives = 191/339 (56.34%), Query Frame = 1
Query:    7 WYYKFLKRHRFSIRRKTSVGQKKPEGWEGKAWAFIQQLRSILLRHAKE----------------AED------------VFKLLYNIDQTPIQAEMPQETTIAKTGAKDARIATGG-KEKLRYTVVLSVRGDGDEVKPRIIYKGTPFFD------------------------------YPAGGVGLGVQKASWCDTTQTDAWLTEEFMRRPG-ASGFS*PASILTLDDFKCHKDEAFQQKLASKAKTEAVMIPGGLTPVVQPLDRSINKEFKRGMRAKYTHWVKDEFDRNGPGKAVAPSRGVVATWVKDVWANISVKTILSCFKVCGLTLNLDGSEDH 843
            WY +F KR+ FSIRR+TSVGQK P+G+EG AWA + +L   L++ A E                 ED            VF+ + N+DQ P+Q EMP ETT+ KTGAKDARI+TGG  EK R+T+VL+V  DG +V PRII++GTPF                                +PA G+  GVQ+ SW D  + + W++  +  RP   S       IL LDDFKCH DE F   L   A T  + IPGGLTP++QPLDR +NK+ KR +R KYT +          GK   P RGVV+TW K+ W +I+ +T+ +C K+CGLTL LDGSEDH
Sbjct:  228 WYQRFRKRNGFSIRRRTSVGQKLPKGYEGMAWATVMKLCEALVKRAGEIYARRHPPAPDESPIKGEDLNSEQLASVEAEVFEEVGNMDQMPVQHEMPVETTLDKTGAKDARISTGGGNEKERFTLVLAVTADGKKVSPRIIFEGTPFIPPTVSGKGKSTRPRKNPVAWEMHPANRAKHGHPANGMSFGVQEKSWSDQRECNGWISGSWKLRPNNGSIVQQRPRILVLDDFKCHNDEGFIAALKRDANTIVIFIPGGLTPLLQPLDRMLNKQMKRLLRGKYTAYSPSAVADARSGKLKPPERGVVSTWCKEAWESITPETVKTCSKICGLTLALDGSEDH 566          
BLAST of mRNA_P-littoralis_Contig812.15.1 vs. uniprot
Match: A0A6H5K8Y4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8Y4_9PHAE)

HSP 1 Score: 258 bits (658), Expect = 4.780e-75
Identity = 146/333 (43.84%), Postives = 185/333 (55.56%), Query Frame = 1
Query:    1 KRWYYKFLKRHRFSIRRKTSVGQKKPEGWEGKAWAFIQQLRSILLRHAKE----------------------------AEDVFKLLYNIDQTPIQAEMPQETTIAKTGAKDARIATGGKEKLRYTVVLSVRGDGDEVKPRIIYKGTPFFD------------------------------YPAGGVGLGVQKASWCDTTQTDAWLTEEFMRRPG-ASGFS*PASILTLDDFKCHKDEAFQQKLASKAKTEAVMIPGGLTPVVQPLDRSINKEFKRGMRAKYT-HWVKDEFDRNGPGKAVAPSRGVVATWVKDVWANISVKTILSCFKVCGLTL 819
            K WY +F KR++FSIRR+TSVGQK P+G EG AWA + +LR  LL  A E                             +++F+ L N+DQTP+Q EMP ETT+  TGAKDARIATGGKEK R+T+ L+V  DG +V  RII+KGTPF                                 P GG+  GVQ+ SWCD  +   W+ + +  RP   S       IL LDDFKCHKD+ F   L  +A T  + IPGGL P+ QPLDR +NK+ KR +R  YT H  K   D    GK V P RG VATW K+ WA+I+ + + +CFK+CGLTL
Sbjct:  186 KSWYQRFCKRNKFSIRRRTSVGQKLPKGHEGMAWATLMKLRKALLERAGEIYAQRYPPAPGESPIRGEDLSSSQLELVTDELFEELGNMDQTPVQHEMPVETTLENTGAKDARIATGGKEKERFTLCLAVSADGKKVPLRIIFKGTPFVPPATPGKGKATQPRKNSIAWEVLPANRSKHGLPVGGMSFGVQEKSWCDLRECKLWIKDSWKLRPNNGSIVRQRRCILVLDDFKCHKDDGFIAALKREANTIVIFIPGGLIPLFQPLDRMLNKQMKRLLRGMYTAHTAKAARDPK-TGKLVPPGRGAVATWCKNAWASITPEIVKTCFKICGLTL 517          
BLAST of mRNA_P-littoralis_Contig812.15.1 vs. uniprot
Match: A0A6H5JQM5_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQM5_9PHAE)

HSP 1 Score: 248 bits (632), Expect = 1.380e-74
Identity = 144/339 (42.48%), Postives = 186/339 (54.87%), Query Frame = 1
Query:    1 KRWYYKFLKRHRFSIRRKTSVGQKKPEGWEGKAWAFIQQLRSILLRHAKE----------------------------AEDVFKLLYNIDQTPIQAEMPQETTIAKTGAKDARIATGGKEKLRYTVVLSVRGDGDEVKPRIIYKGTPF------------------------------FDYPAGGVGLGVQKASWCDTTQTDAWLTEEFMRRPG-ASGFS*PASILTLDDFKCHKDEAFQQKLASKAKTEAVMIPGGLTPVVQPLDRSINKEFKRGMRAKYTHWVKDEFDRNGPGKAVAPSRGVVATWVKDVWANISVKTILSCFKVCGLTLNLDGSED 840
            K WY++F +RH  SIRR+TSVGQK P G+EG A+A + +LR+ LL  A E                            A +VF+ L N+DQTP+Q EMP ETT+ K GAKDARI+TGGKEK R+T+ L+V  DG +V  RII+KG PF                              F YP  G+  GVQ+ SW D  +   WL+E +  RP   S      SIL LDDF+ +              T  ++IPGGLTP++QPLDR ++KE KR MR +YT ++         GK   P RG+V+TW K+ WA I+ +T+  CFKVCGLTL LDGSED
Sbjct:  205 KNWYHRFRERHGLSIRRRTSVGQKLPTGYEGLAFATLMKLRTALLERAGEIYARRNPPASGESPIKGKDLSPAQLESVATEVFEELGNMDQTPVQQEMPVETTLEKGGAKDARISTGGKEKERFTLCLAVMADGGKVPLRIIFKGKPFIPPSTARRGKNTQPRKGSIAAEVLPANQTNFGYPVSGMSFGVQERSWYDACECTLWLSESWGFRPNHGSVIKQRHSILVLDDFRTN--------------TTVILIPGGLTPLLQPLDRMLDKEMKRLMRRRYTQYMASAIADPKTGKLQPPGRGLVSTWCKESWAAITAETVKMCFKVCGLTLALDGSED 529          
BLAST of mRNA_P-littoralis_Contig812.15.1 vs. uniprot
Match: A0A6H5KRZ8_9PHAE (DDE-1 domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRZ8_9PHAE)

HSP 1 Score: 249 bits (636), Expect = 1.390e-74
Identity = 149/351 (42.45%), Postives = 187/351 (53.28%), Query Frame = 1
Query:    7 WYYKFLKRHRFSIRRKTSVGQKKPEGWEGKAWAFIQQLRSILLRHAKE----------------AED------------VFKLLYNIDQTPIQAEMPQETTIAKTGAKDARIATGGKEKLRYTVVLSVRGDGDEVKPRIIYKGTPFFDYPAGG-----------VGLGVQKA--------------------------------SWCDTTQTDAWLTEEFMRRPG-ASGFS*PASILTLDDFKCHKDEAFQQKLASKAKTEAVMIPGGLTPVVQPLDRSINKEFKRGMRAKYTHWVKDEFDRNGPGKAVAPSRGVVATWVKDVWANISVKTILSCFKVCGLTLNLDGSEDH 843
            WY +F KR+ FSIRR+TSVGQK P+G+EG AWA + +LR  L++ A E                 ED            VF+ L N+DQTP+Q EMP ETT+ KTGAKDARI+TGG+EK R+T+VL+V  DG +V PRII+KGTPF      G           V   +  A                                SW D  + + W+   +  RP   S       IL LDDFKCHKDE F   L   AKT  + IPGGLT ++QPLDR +NK+ KR +R KYT            GK   P  GVV+TW K+ W +I+ KT+ +CFK+CGLTL LDGSE H
Sbjct:  216 WYQRFRKRNGFSIRRRTSVGQKLPKGYEGMAWATVMKLREALVKRAGEIYARRHPPAPDESPIKGEDLTSEQLASVEAEVFEELGNMDQTPVQHEMPVETTLEKTGAKDARISTGGEEKERFTLVLAVMADGKKVSPRIIFKGTPFIPPTVSGKVKSTLPRKNSVAWEIHSANXARSGCHGGRQNDVSPRIIFKGTPFIPPTEKSWSDQRECNGWIPGSWKLRPNNGSIVQQRPCILVLDDFKCHKDEGFIAALKRGAKT-VIFIPGGLTSLLQPLDRMLNKQMKRLLRGKYTACSASAVADARSGKLNPPEHGVVSTWCKEAWESITSKTVETCFKICGLTLALDGSEHH 565          
BLAST of mRNA_P-littoralis_Contig812.15.1 vs. uniprot
Match: A0A6H5KII4_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KII4_9PHAE)

HSP 1 Score: 228 bits (582), Expect = 7.850e-69
Identity = 124/263 (47.15%), Postives = 158/263 (60.08%), Query Frame = 1
Query:  148 EAEDVFKLLYNIDQTPIQAEMPQETTIAKTGAKDARIATGGKEKLRYTVVLSVRGDGDEVKPRIIYKGTPFFD------------------------------YPAGGVGLGVQKASWCDTTQTDAWLTEEFMRRPG-ASGFS*PASILTLDDFKCHKDEAFQQKLASKAKTEAVMIPGGLTPVVQPLDRSINKEFKRGMRAKYTHWVKDEFDRNGPGKAVAPSRGVVATWVKDVWANISVKTILSCFKVCGLTLNLDGSEDH 843
            EAE VF+ L N+DQTP+Q EMP ETT+ KTGAKDAR++TGG+EK R+T+VL+V  DG +V  RII+ GTPF                                +PA G+  GVQ+ SW D  + + W +  +  RP   S       IL LDDFKCHKDE F   L   A T  + IPGGLTP++QPLDR +NK+ KR +R+KYT +     D    GK   P RGVV+TW K  W +I+ +T+ +CFK+CGLTL LDGSEDH
Sbjct:   44 EAE-VFEDLGNMDQTPVQHEMPVETTLEKTGAKDARVSTGGEEKERFTLVLAVTADGKKVSLRIIFMGTPFIPPTVSGKGKSTLPRKNSVAWEMHPTNRAKHGHPANGMSFGVQEKSWSDQRECNGWTSGSWKLRPNNGSIVQQRPCILVLDDFKCHKDEGFIAALKRDANTIVIFIPGGLTPLLQPLDRMLNKQTKRLLRSKYTAYSASATDARS-GKLKPPERGVVSTWCKGAWESITPETVKTCFKICGLTLALDGSEDH 304          
BLAST of mRNA_P-littoralis_Contig812.15.1 vs. uniprot
Match: A0A6H5K583_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K583_9PHAE)

HSP 1 Score: 237 bits (604), Expect = 1.190e-67
Identity = 148/387 (38.24%), Postives = 188/387 (48.58%), Query Frame = 1
Query:    1 KRWYYKFLKRHRFSIRRKTSVGQKKPEGWEGKAWAFIQQLRSILLRHAKE----------------------------AEDVFKLLYNIDQTPIQAEMPQETTIAKTGAKDARIATGGKEKLRYTVVLSVRGDGDEVKPRIIYKGTPF------------------------------FDYPAGGVGLGVQKASWCDTTQTDAWLTEEFMRRPG-ASGFS*PASILTLDDFKCHKDEAFQQKLASKAKTEAVMIPGGLTPVVQPLDRSINKEFKRGMRAKY------------------------------------------------THWVKDEFDRNGPGKAVAPSRGVVATWVKDVWANISVKTILSCFKVCGLTLNLDGSED 840
            K WY+ F +RH FSIRR+TSVGQK P G+EG A+A + +LR+ LL  A E                            A  VF+ L N+DQTP+Q EMP ETT+ K G KDARI+TGGKEK R+T  L+V  DG +V  RII+KG PF                              F YP  G+   VQ+ SWCD  +   WL+E +  RP   S      SIL LDDF+CH+ E+F + L  +  T  ++IPGGLTP++QPLDR +NKE KR MR                                                   T ++         GK   P RG+V+T  K+ WA I+ +T+  CFKVCGLTL LDGSED
Sbjct:  101 KNWYHCFRERHGFSIRRRTSVGQKLPTGYEGLAFATLMKLRTALLERAGEIYARRNPPASGESPIKGKDLTPAQLESVAAKVFEELGNMDQTPVQQEMPVETTLEKRGVKDARISTGGKEKDRFTPCLAVMADGGKVPQRIIFKGKPFIPPSTAGREKNTQTRKGYIAAEVLLANRTKFGYPVSGMFFVVQEKSWCDARECTLWLSESWRFRPNHGSVIKQRHSILVLDDFRCHRSESFVKDLRRRTNTTVILIPGGLTPLLQPLDRMLNKEMKRLMRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTQYMASAIADPKTGKLQPPGRGLVSTRYKESWAAITPETVKMCFKVCGLTLALDGSED 487          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig812.15.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JUK2_9PHAE7.980e-8642.78DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5K6L9_9PHAE3.510e-8444.38DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5KE45_9PHAE7.370e-8041.96DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5JTG5_9PHAE1.300e-7942.49DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5JHT8_9PHAE5.490e-7943.36Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K8Y4_9PHAE4.780e-7543.84Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JQM5_9PHAE1.380e-7442.48DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5KRZ8_9PHAE1.390e-7442.45DDE-1 domain-containing protein n=3 Tax=Ectocarpus... [more]
A0A6H5KII4_9PHAE7.850e-6947.15DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5K583_9PHAE1.190e-6738.24Integrase catalytic domain-containing protein n=1 ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig812contigP-littoralis_Contig812:96738..98371 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FXD3
Preferred namePOGK
PFAMsBrkDBD,DDE_1,HTH_Tnp_Tc5,KRAB
Model size843
Max annot lvl2759|Eukaryota
KEGG koko:K09228
Hectar predicted targeting categoryother localisation
Exons4
Evalue3.49e-20
EggNOG OGsKOG3105@1|root,KOG3105@2759|Eukaryota
DescriptionDNA binding
Cds size279
COG categoryCH
BRITEko00000,ko03000
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig812.15.1prot_P-littoralis_Contig812.15.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig812 97062..98014 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791667.3301167-UTR-P-littoralis_Contig812:96737..968901680791667.3301167-UTR-P-littoralis_Contig812:96737..96890Pylaiella littoralis U1_48UTRP-littoralis_Contig812 96738..96890 +
1680791667.345884-UTR-P-littoralis_Contig812:97007..970611680791667.345884-UTR-P-littoralis_Contig812:97007..97061Pylaiella littoralis U1_48UTRP-littoralis_Contig812 97008..97061 +
1680791667.3906097-UTR-P-littoralis_Contig812:98014..983711680791667.3906097-UTR-P-littoralis_Contig812:98014..98371Pylaiella littoralis U1_48UTRP-littoralis_Contig812 98015..98371 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791667.356886-CDS-P-littoralis_Contig812:97061..971221680791667.356886-CDS-P-littoralis_Contig812:97061..97122Pylaiella littoralis U1_48CDSP-littoralis_Contig812 97062..97122 +
1680791667.3670442-CDS-P-littoralis_Contig812:97709..978011680791667.3670442-CDS-P-littoralis_Contig812:97709..97801Pylaiella littoralis U1_48CDSP-littoralis_Contig812 97710..97801 +
1680791667.3797584-CDS-P-littoralis_Contig812:97888..980141680791667.3797584-CDS-P-littoralis_Contig812:97888..98014Pylaiella littoralis U1_48CDSP-littoralis_Contig812 97889..98014 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig812.15.1

>prot_P-littoralis_Contig812.15.1 ID=prot_P-littoralis_Contig812.15.1|Name=mRNA_P-littoralis_Contig812.15.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=93bp
MPQETTIAKTGAKDARIATGGKEKLRYTVVLSVRGDGDEVKPRIIYKGTP
FFDYPAGGVGLGVQKASWCDTTQTDAWLTEEFMRRPGASGFS*
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mRNA from alignment at P-littoralis_Contig812:96738..98371+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig812.15.1 ID=mRNA_P-littoralis_Contig812.15.1|Name=mRNA_P-littoralis_Contig812.15.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=1634bp|location=Sequence derived from alignment at P-littoralis_Contig812:96738..98371+ (Pylaiella littoralis U1_48)
AAGAGGTGGTACTACAAGTTCCTCAAGAGGCACAGGTTCTCGATCCGTCG CAAGACAAGTGTCGGGCAGAAGAAGCCGGAGGGTTGGGAGGGGAAGGCAT GGGCCTTCATCCAGCAGCTGCGCTCGATACTGCTTCGCCATGCCAAGGAA GCCGTTGCCGCGAAGAGGACAGCGGCAAAGGCGCCAGCGGCAATGGCGGG AGAGACGGTCGAGATCGAGATCGAAGAGACCCCAGTGGCGGTGACTGCGG AGGAATTTTTGAGCGTGCAGGAGGACGTGTTCAAGCTGCTCTACAACATA GACCAGACACCCATCCAAGCAGAGATGCCGCAAGAGACCACGATCGCCAA GACAGGTGCGAAGGACGCTCGCATCGCGACAGGAGGTAAGATCTTGCTTG TGAGTCAATTCAGATAACAACGATGACTCAAAAACCCTCTCGGGACGAAA GTTGTCACTTTGCCAAAAAATCAGAAAATTGAAGTGTGGCGACTTGCCAA AAATTTAGAATATAGAAGTGCGGCGACTTTTGTTTGAAATTATTTTTTTG TTTTTGCCGTCACCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCC CCTCTCTCCCTCGCTCTCTGGAACAATGTCGTTCCTTCTTCGTTCCTTCA TCGTGATATGATGTATCCACGTTGTTGACAGTAACGGTCGCAATGCGTAA TAGGTAAAATAATCAATACATGACACCACCGTCTTGCCTGCGTCTTGCCG TCTGTGCATGTTTATTATTTTGATTGTGTGTTGTTCAATTATGCATATTG TTTTACAATTAATAACATGAATGTACGAGTACCCTGTTCACCTTTTTGGC GCTGACTGTGTTGGTTGTACCGTCTTTGTTTTAAATACACAACCTTTTGT CCAAATACCGTATGTTGCTCACTTGCCTTTATCGTCCCCTTTCCTCAATC TGCTGTAATTTATTATGATCAGGGAAGGAGAAGCTGAGGTACACCGTGGT GTTATCTGTGCGTGGTGACGGGGATGAGGTGAAGCCTCGCATCATCTACA AGGGCACCCCGTTCGTCTCCAAGAAGACCAAGAAGGGTGCGTCGACCAAG CCAGGCAAGAACACTCTGACGTACCAGCACATGCCGGCCAACCGAACGCA GTTCGACTACCCGGCGGGCGGCGTAGGCCTCGGGGTGCAGAAGGCTTCAT GGTGCGACACGACCCAAACCGACGCGTGGCTAACGGAGGAGTTCATGCGC CGCCCCGGCGCCAGCGGTTTCTCTTAGCCGGCCAGCATTCTCACGCTGGA CGACTTCAAGTGCCACAAGGACGAAGCGTTCCAGCAGAAGCTGGCAAGCA AGGCCAAGACGGAGGCGGTGATGATTCCTGGCGGGCTGACGCCGGTGGTC CAGCCGCTCGACCGCAGCATCAACAAGGAGTTCAAGCGTGGGATGAGGGC CAAGTACACCCACTGGGTGAAGGACGAGTTCGACCGCAATGGGCCTGGCA AGGCAGTGGCGCCGAGCAGGGGGGTGGTGGCGACGTGGGTGAAGGATGTG TGGGCGAACATCTCGGTGAAGACGATCCTGTCGTGCTTCAAGGTGTGCGG CCTCACCCTCAACCTGGACGGCAGCGAGGACCAC
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Coding sequence (CDS) from alignment at P-littoralis_Contig812:96738..98371+

>mRNA_P-littoralis_Contig812.15.1 ID=mRNA_P-littoralis_Contig812.15.1|Name=mRNA_P-littoralis_Contig812.15.1|organism=Pylaiella littoralis U1_48|type=CDS|length=279bp|location=Sequence derived from alignment at P-littoralis_Contig812:96738..98371+ (Pylaiella littoralis U1_48)
ATGCCGCAAGAGACCACGATCGCCAAGACAGGTGCGAAGGACGCTCGCAT
CGCGACAGGAGGGAAGGAGAAGCTGAGGTACACCGTGGTGTTATCTGTGC
GTGGTGACGGGGATGAGGTGAAGCCTCGCATCATCTACAAGGGCACCCCG
TTCTTCGACTACCCGGCGGGCGGCGTAGGCCTCGGGGTGCAGAAGGCTTC
ATGGTGCGACACGACCCAAACCGACGCGTGGCTAACGGAGGAGTTCATGC
GCCGCCCCGGCGCCAGCGGTTTCTCTTAG
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