mRNA_P-littoralis_Contig812.15.2 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig812.15.2
Unique NamemRNA_P-littoralis_Contig812.15.2
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig812.15.2 vs. uniprot
Match: A0A6H5K6L9_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6L9_9PHAE)

HSP 1 Score: 256 bits (654), Expect = 8.920e-79
Identity = 148/338 (43.79%), Postives = 187/338 (55.33%), Query Frame = 1
Query:    7 WYYKFLKRHRFSIRRKTSVGQKKPEGWEGKAWAFIQQLRSILLRHAKEAL---------------------------------LYNIDQTPIQAEMPQETTIAKTGAKDARIATGGKEKLRYTVVLSVRGDGDEVKPRIIYKGTPF----VSKKTKKGL---------------------------GVQKASWCDTTQTDAWLTEEFMRRPG-ASGFS*PASILTLDDFKCHKDEAFQQKLASKAKTEAVMIPGGLTPVVQPLDRSINKEFKRGMRAKYTHWVKDEFDRNGPGKAVAPSRGVVATWVKDVWANISVKTILSCFKVCGLTLNLDGSEDH 825
            WY +F KR+ FSIRR+TSVGQK P+G EG AWA + +LR  L++ A E                                   L N+DQTP+Q E+P ETT+ KTGAKDARI+TGGKEK R+T+VL+V  DG +V PRII+KGTPF    VS K K  L                           GVQ+ SW D  + + W++  +  RP   S       IL LDDFKCHKDE F   L   A T  + IPG LTP++QPLDR +NK+ KR +R KYT +          GK   P RGVV+TW K+ W + + +T+ +CF +CGLTL LDGSEDH
Sbjct:   34 WYQRFRKRNGFSIRRRTSVGQKLPKGDEGMAWATVMKLREALVKRAGEIYARRHPPAPDESPIKGEDLTSEQLASVEAEVFEELGNMDQTPVQHEIPVETTLEKTGAKDARISTGGKEKERFTLVLAVMADGKKVSPRIIFKGTPFTPPTVSGKGKSTLPRKNSVAWEIHPANRAKHGHPANGMSFGVQEKSWSDQRECNGWISGSWKLRPNNGSIVQQRPCILVLDDFKCHKDEGFIAALKRDANTIVIFIPGRLTPLLQPLDRMLNKQMKRLLRRKYTAYSASAVADARSGKLKPPERGVVSTWCKEAWESSTPETVKTCFMICGLTLALDGSEDH 371          
BLAST of mRNA_P-littoralis_Contig812.15.2 vs. uniprot
Match: A0A6H5JUK2_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUK2_9PHAE)

HSP 1 Score: 254 bits (649), Expect = 1.340e-78
Identity = 153/367 (41.69%), Postives = 192/367 (52.32%), Query Frame = 1
Query:    7 WYYKFLKRHRFSIRRKTSVGQKKPEGWEGKAWAFIQQLRSILLRHAKEAL---------------------------------LYNIDQTPIQAEMPQETTIAKTGAKDARIATGGKEKLRYTVVLSVRGDGDEVKPRIIYKGTPF----VSKKTKKGL---------------------------GVQKASWCDTTQTDAWLTEEFMRRPG-ASGFS*PASILTLDDFKCHKDEAFQQKLASKAKTEAVMIPGGLTPVVQPLDRSINKEFKRGMRAKYTHWVKDEFDRNGPGKAVAPSRGVVATWVKDVWANISVKTILS-----------------------------CFKVCGLTLNLDGSEDH 825
            WY +F KR+ FSIRR+TSVGQK P+G+EG AWA + +LR  L+R A E                                   L N+DQTP+Q EMP ETT+ KTGAKDARI+TGGKEK R+T+VL+V  DG +V PRII+KGTPF    VS K K  L                           GVQ+ SW D  + + W++  +  RP   S       IL LDDFKCHKDE +   L   A T  ++IPGGLTP++QPLDR +NK+ KR +R KYT +          GK   P RGVV+TW K+ W +I+ +T+ S                             CFK+CGLTL LDGSEDH
Sbjct:   34 WYQRFRKRNGFSIRRRTSVGQKLPKGYEGMAWATVMKLREALVRRAGEIYARRHPPAPDESPIKGEDLTFEQLASVEAEVFKELGNMDQTPVQHEMPVETTLEKTGAKDARISTGGKEKERFTLVLAVMADGKKVSPRIIFKGTPFIPPAVSGKGKSTLPRKNSVAWEIHPANRAKHDHPANGMSFGVQEKSWSDQRECNGWISGSWKLRPNNGSIVQQRPCILVLDDFKCHKDEGYIAALKRDANTIVIVIPGGLTPLLQPLDRMLNKQMKRLLRGKYTAYSASAVADARSGKLKPPERGVVSTWCKEAWESITPETVSSVRKERFALGDVRAWSGENPACSVXETVKTCFKICGLTLALDGSEDH 400          
BLAST of mRNA_P-littoralis_Contig812.15.2 vs. uniprot
Match: A0A6H5KE45_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KE45_9PHAE)

HSP 1 Score: 249 bits (636), Expect = 6.000e-75
Identity = 153/367 (41.69%), Postives = 192/367 (52.32%), Query Frame = 1
Query:    1 KRWYYKFLKRHRFSIRRKTSVGQKKPEGWEGKAWAFIQQLRSILLRHAKEAL---------------------------------LYNIDQTPIQAEMPQETTIAKTGAKDARIATG--------------------------GKEKLRYTVVLSVRGDGDEVKPRIIYKGTPFV------------------------SKKTKKGL-------GVQKASWCDTTQTDAWLTEEFMRRPG-ASGFS*PASILTLDDFKCHKDEAFQQKLASKAKTEAVMIPGGLTPVVQPLDRSINKEFKRGMRAKYT-HWVKDEFDRNGPGKAVAPSRGVVATWVKDVWANISVKTILSCFKVCGLTLNLDGSEDH 825
            K WY +F KR++FSIRR+TSVG + P+G EG AWA + +LR  LL  A E                                   L N+DQTP+Q EMP ETT+ KTGAKDARIATG                          GKEK R+T+ L+V  DG +V  RII+KGTPFV                        + ++K GL       GVQ+ SWCD  +   W+ + +  RP   S       IL LDDFKCHKD+ F   L  +A T  + IPGGLTP++QPLDR +NK+ KR +R  YT H  K   D    GK   P RG VATW K+ WA+I+ +T+ +CFK+CGLTL LDGSEDH
Sbjct:  119 KSWYQRFRKRNKFSIRRRTSVGIRLPKGHEGMAWATLMKLRKALLERAGEIYAQRYPPAPGESPIRGEDLSSSQLELVTDELFKDLGNMDQTPVQYEMPVETTLEKTGAKDARIATGAGVCCIRTILKPLPYPPTSCILPPPPGKEKERFTLCLAVSADGTKVPLRIIFKGTPFVPPATPGKGKATQPRKNSIAWEVLPANRSKHGLPVGGMSFGVQEKSWCDLREYKLWIKDSWKLRPNNGSVVRQRRCILVLDDFKCHKDDGFIAALKREANTIVIFIPGGLTPLLQPLDRMLNKQMKRLLRGMYTAHTAKAARDPK-TGKLAPPGRGAVATWCKNAWASITPETVKTCFKICGLTLALDGSEDH 484          
BLAST of mRNA_P-littoralis_Contig812.15.2 vs. uniprot
Match: A0A6H5JTG5_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTG5_9PHAE)

HSP 1 Score: 248 bits (633), Expect = 3.970e-74
Identity = 145/346 (41.91%), Postives = 183/346 (52.89%), Query Frame = 1
Query:    7 WYYKFLKRHRFSIRRKTSVGQKKPEGWEGKAWAFIQQLRSILLRHAKEAL---------------------------------LYNIDQTPIQAEMPQETTIAKTGAKDARIATGGKEKLRYTVVLSVRGDGDEVKPRIIYKGTPF----VSKKTKKGL---------------------------GVQKASWCDTTQTDAWLTEEFMRRPGASGFS*PAS---------ILTLDDFKCHKDEAFQQKLASKAKTEAVMIPGGLTPVVQPLDRSINKEFKRGMRAKYTHWVKDEFDRNGPGKAVAPSRGVVATWVKDVWANISVKTILSCFKVCGLTLNLDGSEDH 825
            WY +F KR+ FSIRR+ SVGQK P+G+EG AWA + +LR  L++ A E                                   L N+DQTP+Q EMP ETT+  TG KDARI+TGGKEK R+T+VL+V  DG  V P II+KGTPF    VS K K  L                           GVQ+ SW    + + W+   +   P       P +         IL LDDFKCHKDE F   L   A T  + IPGGLTP++QPLDR +NK+ KR +R KYT +          GK   P RGVV+TW K+ W  ++ +T+ +CFK+CGLTL LDGSEDH
Sbjct:  188 WYQRFRKRNGFSIRRRASVGQKLPKGYEGMAWATVTKLREALVKRAGEIYARRHPPAPDESPIKGEDLTSEQPASVEAEVFEELGNMDQTPVQHEMPVETTLEDTGGKDARISTGGKEKERFTLVLAVMADGKMVSPCIIFKGTPFIPPTVSGKGKSTLPRKNSVAWEVHPANRAKHGHPANGMSFGVQEKSWSGQQECNGWIPGSWKLCPNNGSMXRPNNGSIVQQRPCILVLDDFKCHKDEGFIAALNRDANTIVIFIPGGLTPLLQPLDRMLNKQMKRLLRGKYTAYSAPAVADARSGKLKPPERGVVSTWCKEAWEFVTSETVNTCFKICGLTLALDGSEDH 533          
BLAST of mRNA_P-littoralis_Contig812.15.2 vs. uniprot
Match: A0A6H5JHT8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHT8_9PHAE)

HSP 1 Score: 248 bits (633), Expect = 1.560e-73
Identity = 142/339 (41.89%), Postives = 186/339 (54.87%), Query Frame = 1
Query:    7 WYYKFLKRHRFSIRRKTSVGQKKPEGWEGKAWAFIQQLRSILLRHAKEAL---------------------------------LYNIDQTPIQAEMPQETTIAKTGAKDARIATGG-KEKLRYTVVLSVRGDGDEVKPRIIYKGTPFV------------------------SKKTKKG-------LGVQKASWCDTTQTDAWLTEEFMRRPG-ASGFS*PASILTLDDFKCHKDEAFQQKLASKAKTEAVMIPGGLTPVVQPLDRSINKEFKRGMRAKYTHWVKDEFDRNGPGKAVAPSRGVVATWVKDVWANISVKTILSCFKVCGLTLNLDGSEDH 825
            WY +F KR+ FSIRR+TSVGQK P+G+EG AWA + +L   L++ A E                                   + N+DQ P+Q EMP ETT+ KTGAKDARI+TGG  EK R+T+VL+V  DG +V PRII++GTPF+                        + + K G        GVQ+ SW D  + + W++  +  RP   S       IL LDDFKCH DE F   L   A T  + IPGGLTP++QPLDR +NK+ KR +R KYT +          GK   P RGVV+TW K+ W +I+ +T+ +C K+CGLTL LDGSEDH
Sbjct:  228 WYQRFRKRNGFSIRRRTSVGQKLPKGYEGMAWATVMKLCEALVKRAGEIYARRHPPAPDESPIKGEDLNSEQLASVEAEVFEEVGNMDQMPVQHEMPVETTLDKTGAKDARISTGGGNEKERFTLVLAVTADGKKVSPRIIFEGTPFIPPTVSGKGKSTRPRKNPVAWEMHPANRAKHGHPANGMSFGVQEKSWSDQRECNGWISGSWKLRPNNGSIVQQRPRILVLDDFKCHNDEGFIAALKRDANTIVIFIPGGLTPLLQPLDRMLNKQMKRLLRGKYTAYSPSAVADARSGKLKPPERGVVSTWCKEAWESITPETVKTCSKICGLTLALDGSEDH 566          
BLAST of mRNA_P-littoralis_Contig812.15.2 vs. uniprot
Match: A0A6H5KRZ8_9PHAE (DDE-1 domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRZ8_9PHAE)

HSP 1 Score: 244 bits (623), Expect = 3.210e-72
Identity = 147/351 (41.88%), Postives = 185/351 (52.71%), Query Frame = 1
Query:    7 WYYKFLKRHRFSIRRKTSVGQKKPEGWEGKAWAFIQQLRSILLRHAKEAL---------------------------------LYNIDQTPIQAEMPQETTIAKTGAKDARIATGGKEKLRYTVVLSVRGDGDEVKPRIIYKGTPF----VSKKTKKGLGVQKA----------------------------------------SWCDTTQTDAWLTEEFMRRPG-ASGFS*PASILTLDDFKCHKDEAFQQKLASKAKTEAVMIPGGLTPVVQPLDRSINKEFKRGMRAKYTHWVKDEFDRNGPGKAVAPSRGVVATWVKDVWANISVKTILSCFKVCGLTLNLDGSEDH 825
            WY +F KR+ FSIRR+TSVGQK P+G+EG AWA + +LR  L++ A E                                   L N+DQTP+Q EMP ETT+ KTGAKDARI+TGG+EK R+T+VL+V  DG +V PRII+KGTPF    VS K K  L  + +                                        SW D  + + W+   +  RP   S       IL LDDFKCHKDE F   L   AKT  + IPGGLT ++QPLDR +NK+ KR +R KYT            GK   P  GVV+TW K+ W +I+ KT+ +CFK+CGLTL LDGSE H
Sbjct:  216 WYQRFRKRNGFSIRRRTSVGQKLPKGYEGMAWATVMKLREALVKRAGEIYARRHPPAPDESPIKGEDLTSEQLASVEAEVFEELGNMDQTPVQHEMPVETTLEKTGAKDARISTGGEEKERFTLVLAVMADGKKVSPRIIFKGTPFIPPTVSGKVKSTLPRKNSVAWEIHSANXARSGCHGGRQNDVSPRIIFKGTPFIPPTEKSWSDQRECNGWIPGSWKLRPNNGSIVQQRPCILVLDDFKCHKDEGFIAALKRGAKT-VIFIPGGLTSLLQPLDRMLNKQMKRLLRGKYTACSASAVADARSGKLNPPEHGVVSTWCKEAWESITSKTVETCFKICGLTLALDGSEHH 565          
BLAST of mRNA_P-littoralis_Contig812.15.2 vs. uniprot
Match: A0A6H5K8Y4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8Y4_9PHAE)

HSP 1 Score: 248 bits (634), Expect = 2.880e-71
Identity = 146/333 (43.84%), Postives = 183/333 (54.95%), Query Frame = 1
Query:    1 KRWYYKFLKRHRFSIRRKTSVGQKKPEGWEGKAWAFIQQLRSILLRHAKEAL---------------------------------LYNIDQTPIQAEMPQETTIAKTGAKDARIATGGKEKLRYTVVLSVRGDGDEVKPRIIYKGTPFV------------------------SKKTKKGL-------GVQKASWCDTTQTDAWLTEEFMRRPG-ASGFS*PASILTLDDFKCHKDEAFQQKLASKAKTEAVMIPGGLTPVVQPLDRSINKEFKRGMRAKYT-HWVKDEFDRNGPGKAVAPSRGVVATWVKDVWANISVKTILSCFKVCGLTL 801
            K WY +F KR++FSIRR+TSVGQK P+G EG AWA + +LR  LL  A E                                   L N+DQTP+Q EMP ETT+  TGAKDARIATGGKEK R+T+ L+V  DG +V  RII+KGTPFV                        + ++K GL       GVQ+ SWCD  +   W+ + +  RP   S       IL LDDFKCHKD+ F   L  +A T  + IPGGL P+ QPLDR +NK+ KR +R  YT H  K   D    GK V P RG VATW K+ WA+I+ + + +CFK+CGLTL
Sbjct:  186 KSWYQRFCKRNKFSIRRRTSVGQKLPKGHEGMAWATLMKLRKALLERAGEIYAQRYPPAPGESPIRGEDLSSSQLELVTDELFEELGNMDQTPVQHEMPVETTLENTGAKDARIATGGKEKERFTLCLAVSADGKKVPLRIIFKGTPFVPPATPGKGKATQPRKNSIAWEVLPANRSKHGLPVGGMSFGVQEKSWCDLRECKLWIKDSWKLRPNNGSIVRQRRCILVLDDFKCHKDDGFIAALKREANTIVIFIPGGLIPLFQPLDRMLNKQMKRLLRGMYTAHTAKAARDPK-TGKLVPPGRGAVATWCKNAWASITPEIVKTCFKICGLTL 517          
BLAST of mRNA_P-littoralis_Contig812.15.2 vs. uniprot
Match: A0A6H5JQM5_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQM5_9PHAE)

HSP 1 Score: 231 bits (590), Expect = 6.100e-68
Identity = 140/339 (41.30%), Postives = 181/339 (53.39%), Query Frame = 1
Query:    1 KRWYYKFLKRHRFSIRRKTSVGQKKPEGWEGKAWAFIQQLRSILLRHAKEAL---------------------------------LYNIDQTPIQAEMPQETTIAKTGAKDARIATGGKEKLRYTVVLSVRGDGDEVKPRIIYKGTPFVSKKT---------KKG----------------------LGVQKASWCDTTQTDAWLTEEFMRRPG-ASGFS*PASILTLDDFKCHKDEAFQQKLASKAKTEAVMIPGGLTPVVQPLDRSINKEFKRGMRAKYTHWVKDEFDRNGPGKAVAPSRGVVATWVKDVWANISVKTILSCFKVCGLTLNLDGSED 822
            K WY++F +RH  SIRR+TSVGQK P G+EG A+A + +LR+ LL  A E                                   L N+DQTP+Q EMP ETT+ K GAKDARI+TGGKEK R+T+ L+V  DG +V  RII+KG PF+   T         +KG                       GVQ+ SW D  +   WL+E +  RP   S      SIL LDDF+ +              T  ++IPGGLTP++QPLDR ++KE KR MR +YT ++         GK   P RG+V+TW K+ WA I+ +T+  CFKVCGLTL LDGSED
Sbjct:  205 KNWYHRFRERHGLSIRRRTSVGQKLPTGYEGLAFATLMKLRTALLERAGEIYARRNPPASGESPIKGKDLSPAQLESVATEVFEELGNMDQTPVQQEMPVETTLEKGGAKDARISTGGKEKERFTLCLAVMADGGKVPLRIIFKGKPFIPPSTARRGKNTQPRKGSIAAEVLPANQTNFGYPVSGMSFGVQERSWYDACECTLWLSESWGFRPNHGSVIKQRHSILVLDDFRTN--------------TTVILIPGGLTPLLQPLDRMLDKEMKRLMRRRYTQYMASAIADPKTGKLQPPGRGLVSTWCKESWAAITAETVKMCFKVCGLTLALDGSED 529          
BLAST of mRNA_P-littoralis_Contig812.15.2 vs. uniprot
Match: A0A6H5KII4_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KII4_9PHAE)

HSP 1 Score: 218 bits (555), Expect = 2.290e-64
Identity = 121/255 (47.45%), Postives = 152/255 (59.61%), Query Frame = 1
Query:  157 LYNIDQTPIQAEMPQETTIAKTGAKDARIATGGKEKLRYTVVLSVRGDGDEVKPRIIYKGTPF----VSKKTKKGL---------------------------GVQKASWCDTTQTDAWLTEEFMRRPG-ASGFS*PASILTLDDFKCHKDEAFQQKLASKAKTEAVMIPGGLTPVVQPLDRSINKEFKRGMRAKYTHWVKDEFDRNGPGKAVAPSRGVVATWVKDVWANISVKTILSCFKVCGLTLNLDGSEDH 825
            L N+DQTP+Q EMP ETT+ KTGAKDAR++TGG+EK R+T+VL+V  DG +V  RII+ GTPF    VS K K  L                           GVQ+ SW D  + + W +  +  RP   S       IL LDDFKCHKDE F   L   A T  + IPGGLTP++QPLDR +NK+ KR +R+KYT +     D    GK   P RGVV+TW K  W +I+ +T+ +CFK+CGLTL LDGSEDH
Sbjct:   51 LGNMDQTPVQHEMPVETTLEKTGAKDARVSTGGEEKERFTLVLAVTADGKKVSLRIIFMGTPFIPPTVSGKGKSTLPRKNSVAWEMHPTNRAKHGHPANGMSFGVQEKSWSDQRECNGWTSGSWKLRPNNGSIVQQRPCILVLDDFKCHKDEGFIAALKRDANTIVIFIPGGLTPLLQPLDRMLNKQTKRLLRSKYTAYSASATDARS-GKLKPPERGVVSTWCKGAWESITPETVKTCFKICGLTLALDGSEDH 304          
BLAST of mRNA_P-littoralis_Contig812.15.2 vs. uniprot
Match: A0A6H5KT06_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KT06_9PHAE)

HSP 1 Score: 210 bits (535), Expect = 2.700e-63
Identity = 116/252 (46.03%), Postives = 147/252 (58.33%), Query Frame = 1
Query:  166 IDQTPIQAEMPQETTIAKTGAKDARIATGGKEKLRYTVVLSVRGDGDEVKPRIIYKGTPF----VSKKTKKGL---------------------------GVQKASWCDTTQTDAWLTEEFMRRPG-ASGFS*PASILTLDDFKCHKDEAFQQKLASKAKTEAVMIPGGLTPVVQPLDRSINKEFKRGMRAKYTHWVKDEFDRNGPGKAVAPSRGVVATWVKDVWANISVKTILSCFKVCGLTLNLDGSEDH 825
            +DQTP+Q EMP ETT+ KTGAKDARI+TGGKE+ R+ +VL+V  DG +V PRI +KGTPF    VS K K  L                           GVQ+ SW D  + + W++  +  RP   S       IL LDDFK HKDE F   L   A T  + IPGGLTP++QPLD  +NK+ KR +R KY  +          GK   P RGVV+TW K+ W +I+ +T+ +CFK+CGLTL LDGSEDH
Sbjct:    1 MDQTPVQHEMPVETTLEKTGAKDARISTGGKEQERFALVLAVMADGKKVSPRITFKGTPFTPPTVSGKGKSTLPRKNSVAWEIHPANRAKHGHPANGVSFGVQEKSWSDQRECNGWISGRWKLRPNNGSIVQQRPCILVLDDFKRHKDEGFIAALKRDANTIVIFIPGGLTPLLQPLDCMLNKQMKRLLRGKYIAYSASAVADARSGKLKPPERGVVSTWCKEAWESITPETVKTCFKICGLTLALDGSEDH 252          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig812.15.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K6L9_9PHAE8.920e-7943.79DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5JUK2_9PHAE1.340e-7841.69DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5KE45_9PHAE6.000e-7541.69DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5JTG5_9PHAE3.970e-7441.91DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5JHT8_9PHAE1.560e-7341.89Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KRZ8_9PHAE3.210e-7241.88DDE-1 domain-containing protein n=3 Tax=Ectocarpus... [more]
A0A6H5K8Y4_9PHAE2.880e-7143.84Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JQM5_9PHAE6.100e-6841.30DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5KII4_9PHAE2.290e-6447.45DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5KT06_9PHAE2.700e-6346.03DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig812contigP-littoralis_Contig812:96738..98674 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog588596.U9SZ56
PFAMsDDE_1,HTH_Tnp_Tc5,SAP
Model size933
Max annot lvl4751|Fungi
Hectar predicted targeting categoryother localisation
Exons5
Evalue2.01e-16
EggNOG OGsKOG3105@1|root,KOG3105@2759|Eukaryota,38I47@33154|Opisthokonta,3P9QG@4751|Fungi
DescriptionDDE superfamily endonuclease
Cds size372
COG categoryBD
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig812.15.2prot_P-littoralis_Contig812.15.2Pylaiella littoralis U1_48polypeptideP-littoralis_Contig812 98108..98674 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791667.2138064-UTR-P-littoralis_Contig812:96737..968901680791667.2138064-UTR-P-littoralis_Contig812:96737..96890Pylaiella littoralis U1_48UTRP-littoralis_Contig812 96738..96890 +
1680791667.2270753-UTR-P-littoralis_Contig812:97022..971221680791667.2270753-UTR-P-littoralis_Contig812:97022..97122Pylaiella littoralis U1_48UTRP-littoralis_Contig812 97023..97122 +
1680791667.243762-UTR-P-littoralis_Contig812:97709..978231680791667.243762-UTR-P-littoralis_Contig812:97709..97823Pylaiella littoralis U1_48UTRP-littoralis_Contig812 97710..97823 +
1680791667.2588077-UTR-P-littoralis_Contig812:97913..981071680791667.2588077-UTR-P-littoralis_Contig812:97913..98107Pylaiella littoralis U1_48UTRP-littoralis_Contig812 97914..98107 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791667.2703843-CDS-P-littoralis_Contig812:98107..983731680791667.2703843-CDS-P-littoralis_Contig812:98107..98373Pylaiella littoralis U1_48CDSP-littoralis_Contig812 98108..98373 +
1680791667.2820072-CDS-P-littoralis_Contig812:98568..986741680791667.2820072-CDS-P-littoralis_Contig812:98568..98674Pylaiella littoralis U1_48CDSP-littoralis_Contig812 98569..98674 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig812.15.2

>prot_P-littoralis_Contig812.15.2 ID=prot_P-littoralis_Contig812.15.2|Name=mRNA_P-littoralis_Contig812.15.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=124bp
MIPGGLTPVVQPLDRSINKEFKRGMRAKYTHWVKDEFDRNGPGKAVAPSR
GVVATWVKDVWANISVKTILSCFKVCGLTLNLDGSEDHDEFDDSDDDCCA
VDLVDLVDSDSEGEEEEEEEAES*
back to top

mRNA from alignment at P-littoralis_Contig812:96738..98674+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig812.15.2 ID=mRNA_P-littoralis_Contig812.15.2|Name=mRNA_P-littoralis_Contig812.15.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=1937bp|location=Sequence derived from alignment at P-littoralis_Contig812:96738..98674+ (Pylaiella littoralis U1_48)
AAGAGGTGGTACTACAAGTTCCTCAAGAGGCACAGGTTCTCGATCCGTCG CAAGACAAGTGTCGGGCAGAAGAAGCCGGAGGGTTGGGAGGGGAAGGCAT GGGCCTTCATCCAGCAGCTGCGCTCGATACTGCTTCGCCATGCCAAGGAA GCCGTTGCCGCGAAGAGGACAGCGGCAAAGGCGCCAGCGGCAATGGCGGG AGAGACGGTCGAGATCGAGATCGAAGAGACCCCAGTGGCGGTGACTGCGG AGGAATTTTTGAGCGTGCAGGAGGACGTGTTCAAGCTGCTCTACAACATA GACCAGACACCCATCCAAGCAGAGATGCCGCAAGAGACCACGATCGCCAA GACAGGTGCGAAGGACGCTCGCATCGCGACAGGAGGTAAGATCTTGCTTG TGAGTCAATTCAGATAACAACGATGACTCAAAAACCCTCTCGGGACGAAA GTTGTCACTTTGCCAAAAAATCAGAAAATTGAAGTGTGGCGACTTGCCAA AAATTTAGAATATAGAAGTGCGGCGACTTTTGTTTGAAATTATTTTTTTG TTTTTGCCGTCACCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCC CCTCTCTCCCTCGCTCTCTGGAACAATGTCGTTCCTTCTTCGTTCCTTCA TCGTGATATGATGTATCCACGTTGTTGACAGTAACGGTCGCAATGCGTAA TAGGTAAAATAATCAATACATGACACCACCGTCTTGCCTGCGTCTTGCCG TCTGTGCATGTTTATTATTTTGATTGTGTGTTGTTCAATTATGCATATTG TTTTACAATTAATAACATGAATGTACGAGTACCCTGTTCACCTTTTTGGC GCTGACTGTGTTGGTTGTACCGTCTTTGTTTTAAATACACAACCTTTTGT CCAAATACCGTATGTTGCTCACTTGCCTTTATCGTCCCCTTTCCTCAATC TGCTGTAATTTATTATGATCAGGGAAGGAGAAGCTGAGGTACACCGTGGT GTTATCTGTGCGTGGTGACGGGGATGAGGTGAAGCCTCGCATCATCTACA AGGGCACCCCGTTCGTCTCCAAGAAGACCAAGAAGGGTGCGTCGACCAAG CCAGGCAAGAACACTCTGACGTACCAGCACATGCCGGCCAACCGAACGCA GTTCGACTACCCGGCGGGCGGCGTAGGCCTCGGGGTGCAGAAGGCTTCAT GGTGCGACACGACCCAAACCGACGCGTGGCTAACGGAGGAGTTCATGCGC CGCCCCGGCGCCAGCGGTTTCTCTTAGCCGGCCAGCATTCTCACGCTGGA CGACTTCAAGTGCCACAAGGACGAAGCGTTCCAGCAGAAGCTGGCAAGCA AGGCCAAGACGGAGGCGGTGATGATTCCTGGCGGGCTGACGCCGGTGGTC CAGCCGCTCGACCGCAGCATCAACAAGGAGTTCAAGCGTGGGATGAGGGC CAAGTACACCCACTGGGTGAAGGACGAGTTCGACCGCAATGGGCCTGGCA AGGCAGTGGCGCCGAGCAGGGGGGTGGTGGCGACGTGGGTGAAGGATGTG TGGGCGAACATCTCGGTGAAGACGATCCTGTCGTGCTTCAAGGTGTGCGG CCTCACCCTCAACCTGGACGGCAGCGAGGACCACGAGTGGTGCATCCACA CCTTCGGCGAGGGGTACCGCGAGGTCCTTGTCGAGCAGCGGGTGGTGTGG GAGCAAGCGCACGGCAAGGAACTGGAGCCTCTTCAGCTGCCGGTCGTTCC CGAGGGTGGTGGAGGAGTGGCAGCGGGCGTGGTCACGGTCACGGCAGCAG TAGAGGAGGTCCAAGCTTCCCTGGCACCCAGCGAGTTCGACGACTCAGAC GACGACTGCTGCGCAGTCGACCTAGTCGACCTCGTCGACTCGGACTCGGA GGGAGAAGAAGAGGAGGAGGAGGAGGCGGAGTCGTAG
back to top

Coding sequence (CDS) from alignment at P-littoralis_Contig812:96738..98674+

>mRNA_P-littoralis_Contig812.15.2 ID=mRNA_P-littoralis_Contig812.15.2|Name=mRNA_P-littoralis_Contig812.15.2|organism=Pylaiella littoralis U1_48|type=CDS|length=372bp|location=Sequence derived from alignment at P-littoralis_Contig812:96738..98674+ (Pylaiella littoralis U1_48)
ATGATTCCTGGCGGGCTGACGCCGGTGGTCCAGCCGCTCGACCGCAGCAT
CAACAAGGAGTTCAAGCGTGGGATGAGGGCCAAGTACACCCACTGGGTGA
AGGACGAGTTCGACCGCAATGGGCCTGGCAAGGCAGTGGCGCCGAGCAGG
GGGGTGGTGGCGACGTGGGTGAAGGATGTGTGGGCGAACATCTCGGTGAA
GACGATCCTGTCGTGCTTCAAGGTGTGCGGCCTCACCCTCAACCTGGACG
GCAGCGAGGACCACGACGAGTTCGACGACTCAGACGACGACTGCTGCGCA
GTCGACCTAGTCGACCTCGTCGACTCGGACTCGGAGGGAGAAGAAGAGGA
GGAGGAGGAGGCGGAGTCGTAG
back to top