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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 0 |
| Start | 0 |
| Model size | 388 |
| Hectar predicted targeting category | signal peptide |
| Exons | 3 |
| Cds size | 384 |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1680791666.9841247-CDS-P-littoralis_Contig812:117096..117177 | 1680791666.9841247-CDS-P-littoralis_Contig812:117096..117177 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig812 117097..117177 + |
| 1680791666.9980643-CDS-P-littoralis_Contig812:118001..118079 | 1680791666.9980643-CDS-P-littoralis_Contig812:118001..118079 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig812 118002..118079 + |
| 1680791667.0214431-CDS-P-littoralis_Contig812:121431..121656 | 1680791667.0214431-CDS-P-littoralis_Contig812:121431..121656 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig812 121432..121656 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig812.25.1 >prot_P-littoralis_Contig812.25.1 ID=prot_P-littoralis_Contig812.25.1|Name=mRNA_P-littoralis_Contig812.25.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=128bp
QLLIYLLYALPSVRVRLCARAEFCFFTNPPASPSIQPCSHSEDLHRRRQR
RTKPRTWYQHRSLSLYNAITGAAKGRPGWTQPQNPDGAQQEGSRDQRWAH
SPRLRPVGEACQEIGRSPGRGKSKPHPP back to topmRNA from alignment at P-littoralis_Contig812:117097..121658+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-littoralis_Contig812.25.1 ID=mRNA_P-littoralis_Contig812.25.1|Name=mRNA_P-littoralis_Contig812.25.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=4562bp|location=Sequence derived from alignment at P-littoralis_Contig812:117097..121658+ (Pylaiella littoralis U1_48)
CAACTTCTGATCTACCTGCTGTACGCGCTACCATCAGTACGAGTGAGACT
CTGTGCCAGGGCAGAGTTTTGTTTTTTCACGGTGAGTCTTGTTGTCATGA
CCGTCCTCAGGGCAGCACCCCGGGGTAGTTCCCTACCGAATTCAGACTAC
CCTCGACGTCGCAGGCACTAGCGTCTCGCCCACGAAGGAGGTTAGTCTCA
CACACCCGGTGCCGTCAGTATATGTCTCAGGCTCTCTCGGATAGAAGTCC
GTTTGGAAATCGGACTTGTGTAGGCAGACTTCTCTCCAAAATGCGGACAA
GAATCTCACCGTGTCGAGAGGACCCTGAGCGTTCGCCAGAAGCAGGTTGA
AAAACAATGCAGGAAAAATGGAAAATTTATTTTTGAAAAATCAACACACA
GCCCATGGCGTGCAATCACCACCGCGCGGTACGCCAGAGCACGCCTCGTG
CCTGCGGGTGAACAGAAAATGCTGTGGGTTACCAGAATGCCGTCGGCTTC
AGCTTTGGTGCTGTGTTGTGTATCGGTGACGAGTCACTTTGTAGCAGGGC
GTTGTTGGCTAGGTAATCTGTAATCTGTAATCTGCCATCGCTTCTGCGTG
AAAAAACAAAACTCTGCCCTGGCACAGAGTCTCACTCGTACTGATGGTAG
CGCGTACAGTAGGTAGATCAGAAGTTGGCGTCGCGGTCGTCGCGTCCTTG
GTCGCGTGCGAGCGTGATGGAAGTGGGCAGCAGCGGGGGGCCAACATGTC
CCCGACATGCCAGAACGCGAAAAAGTACTACGAAACCCAGGTTGCGGATC
GCTTGGCGACACCCCGCTGCCCAATACTGTTTTTAGAAGGGGCGCTGTTC
TGCCGTCATCCAATGGTTATTTATTCTTGTCATCTACCATTGCAACACAC
GGCAGAATCCTCCAGCTTCACCATCCATACAACCCTGCAGCCACTCTGAG
GACTTGCACCGAAGACGCCAAAGACGCACCAAAGTGAGTGTGTGCTGCTG
AACGATGAAGTCTGTCCAAGTATGTATGGAGCCTATGGAGATAGACCACA
TATTATGTAGTTCTGTACCAAGCATGCATGCATCATTCAGAACAAGCATC
TCAGCAACGAATGGGTCTCCGCATCGAATATCGCAGCGCAGCAGTCCCCA
TTCCTAGAAGTCTGGGCCACGCAGTGCTCCTCAAGTGTGCCGATGATACT
ATAGCTTTGTCGAACTTATGGAACACGGGCACCGTTGTTGCTTTAATCCC
ACAGGAGCGGGGAAAAAGCAGTGCTCTTTACTCTCCTGCCGTCGTCCACA
ATGAAGTTTGCTTTTCGCGCACTTTCCCCAGCCTTTTTCGCTCCTGGCGC
ATTATTTTCCATTTTCCTTTTTCCCAACGGGTTTTACTCCAATCCAATCA
AATCATCATGTGTATCACACTGCTGTACAGAGAACACTCCTGTTGCATGC
ACTTCTGTCCTGGTAGCACTTACCGCACGGCGGGTATTACGTTACCGGGT
ACCCGGAAACTAGGTTTCCCAAGCACACAGCAGCCTCATTCCACAGCCGT
TTTGGTGAACCTACCCACAGCCTCTACCTCTGGGTCATGGTATAAGGTCG
CTTCTGAAACTACTTCGAAGTGCTTCGTACATATCATACAAGTATCCTAC
AAGTATACTCCTAGTATACGATATGGAATTTGAGGCTGTCGTACTTGACA
CCTCAAGGTCCTAGGTTCGATTCCCTCATGAAGCACTTATTTTATTTTCG
AAAACAAAACAAAAATAATACAGAAATAATACAGGGAAAATGTTTTCTTC
ATAATAAATAGACTACTGCTGCTGCTGTGTTTTTCCGAGCCTCATATTCG
AAGTATAAATGTTTTATTCTTTATCTTTGCTTTTCCACCGGTTGGCTGTG
AAGAAAAAGAGGAGTATTATTTTTTAGGTAACGGGAAATGAACAACCAGC
GGCGGCTAGTTGCTTTTCCGTGGGAACACTTTCCTACTTTTTTTCACGCG
GGAAGACGGAATTTTGTTTTTCGGGAACCGGGACGGGGCGTATATTAGTT
AACCGTGGCGGGACGGGGAGATTATTATTTCTTAGTTAAATTTGTTCTTA
GGGCCGGGATGGGACTGAAGTTTTTTTGCGGTACAGTGTAGCAGTTTTTC
CGGCGAGGCGGGACGGAAACCCGTCCCGTCGTTGCAAGGGCGGAAATTTC
CGTCCCGCTAGTCGTCTATGTAACGCTTATATATTTTTGGCAACGAGGAT
GCATATATAGATTTTTTCTTACAAACACATCAATGTGTTCCCCTCGAGAA
TGCTTACTGTACATGTAAAACTCGATTTCATATCCATGGAAACATGATCT
CCGGAAATTTCTTAGAAGGCATGAGGGGTGACGTACGTGCGGTCAACCTG
ACACATCCAAGTGTTGAGAAGCAGATACAGCAATTACCACCACCGTCGTC
CTCTCGTTCCTTACACCAACTCTCGTTGTGAAACCTTCTTGGCAGTCACT
TCCATTCATGGGACGTTGAGTTGAAGGTGGGGTCATTCAAACGACAAAGC
GAAGGGGCGCTGGTTGTTGGGGCATTCTGGAAATACCAACCGACAGATGT
ATCTGACCACACTCAAGTACTGCAAACTACTTGGAAAATATACCGCTTGT
TCTACGGCCTGAAAAGTAATTACAGCAGTAGCAGAACACATCCGATAGAG
CGCGATGCTGACGCAGTCTGTCGATTGAAGGACCCCACCTCGAACGCAAC
ACCTTGATGACGGACAGCAGCACAATGAGGCAACAGCCACGAAGGTCGCG
TTGACTTGTCAGGTACCCATATCTGACTGCTGCTGTGGTGTTGTCATATG
TCTTGTCTGGATATTGTCCTCCCGCATCTCATCATAATTCGCATACCTTC
AAAAAATGAAGGGCGACTTTCAATCAAATCGTTTCTTTTCGAACGCCTGG
CCAACTCACCTACCAGCGGCCGGACTGGTAACGCGGTGGCTCTACGGCCA
CTTCGATGCCCCCACGAGGTCACCGTTACGTGCAGGTCTCACGGCGTGTT
GCCACTGCTGTGTGTGCACACTTATTTGGACATATGAAAATATTGAACGT
GGAAACATCCTAGAAATCTGGAAAGGACTTGGGCCACTTTTTGGGCCCGA
GTATTGCAAATATGGACAAACGCCTCCATCTTATTCCATATACTCCGGAG
TATATGTAAACTGGAAATTTCCATTAATATGGACAAATATGGAAATTTCC
ATATATATCAAATCTTAAATATGGACGTCACGTGATGCTTAAAACGACCC
TTCCTTACAACCCCGAACCTTAGTTCTGCCCGACGCACATGAGAAAAACC
TCGGTCATGCCCAACGTACAATAGACAAATGTATATATCGCATATCGCGC
CCTTCAGTCGACTGCAGGATGTACATGTTCATGCACACCCACATTAACCC
TCCTGGTACTGGGCTCCGTGACACAGGTGGCTAGTCGAGAAGCCTGTTTT
TCTTGTCGTTCAAAAAGGTACCGTTTCGTGCAATCTCGCCGCGTAATGCC
TGTAAATCGCCTCGAGAATTGCAGCAGCACAGCAGCCATGGCACGAGCTA
GAAATACGCAGGGGCTGCGGCAAAGGCCCGCAATAGGCTGGATAGGCTGG
ATAGGTTGGGGTTAGATATTAGGAGGATATCCCAGCCGCTAATACGAGCC
GACAGAGGTAGCATGTTGTATCCCTGATTCCGGTGTGTTTGCTCCTGCTC
TCTATTTGAAGTATACATCCTATTGCCCGACAAAAAATCGCCCAATTTTT
CCCGGCTGAAGGTTTTCCTGTATCTGTAATTCTCTAATCCCCTGTGGTGG
AGGCCTTCGGCCTCTTTAGCGTACCCATTGCTGCTGCTGCTGCTGCTGCC
TGGTGAAGGCTCTCGTAAGAAAGCACACAACCTTGCCTGTTCTTCCCGCG
GTTGACGCTACCACCTACTACGCAGAGAGAGGGCGCCACTACCGCCTGCT
ACAACCAATTCGTCTCGTTCACACACACACACACACACACACACACGTGT
TTATGATTCCAGCGTCCGAGTAGACCGGGCTGAAGCAAAAACATAAAATA
TTGCCCGATTCTGATGCCCGATTTCCTCCGAAGGCCCAGAAGGGTTAACA
GGCCCACACTGCACACTTATTAAATACCAGGGCTGCGATTTCCTTGATCA
TTTGTCGTTAATTTTGTGCCACACATGACGACTGCTCGGCCTACTGCCCG
GACCCCCCCCCTACTCTTGCCCGCCGGCCCCAACACTCACTCACGCCTGT
TGATGGTTCGGCTGCATGAATCGTTCATCAAACAGCCAAGGACGTGGTAT
CAACACCGATCACTCTCCTTGTACAATGCGATCACCGGGGCTGCTAAAGG
AAGACCTGGCTGGACTCAACCGCAGAATCCCGACGGTGCTCAACAAGAAG
GGAGCAGGGATCAAAGATGGGCTCACAGCCCAAGATTGCGCCCGGTTGGT
GAGGCATGCCAAGAAATCGGCCGATCCCCTGGCCGGGGAAAAAGCAAACC
CCATCCCCCCGG back to topCoding sequence (CDS) from alignment at P-littoralis_Contig812:117097..121658+ >mRNA_P-littoralis_Contig812.25.1 ID=mRNA_P-littoralis_Contig812.25.1|Name=mRNA_P-littoralis_Contig812.25.1|organism=Pylaiella littoralis U1_48|type=CDS|length=384bp|location=Sequence derived from alignment at P-littoralis_Contig812:117097..121658+ (Pylaiella littoralis U1_48)
CAACTTCTGATCTACCTGCTGTACGCGCTACCATCAGTACGAGTGAGACT
CTGTGCCAGGGCAGAGTTTTGTTTTTTCACGAATCCTCCAGCTTCACCAT
CCATACAACCCTGCAGCCACTCTGAGGACTTGCACCGAAGACGCCAAAGA
CGCACCAAACCAAGGACGTGGTATCAACACCGATCACTCTCCTTGTACAA
TGCGATCACCGGGGCTGCTAAAGGAAGACCTGGCTGGACTCAACCGCAGA
ATCCCGACGGTGCTCAACAAGAAGGGAGCAGGGATCAAAGATGGGCTCAC
AGCCCAAGATTGCGCCCGGTTGGTGAGGCATGCCAAGAAATCGGCCGATC
CCCTGGCCGGGGAAAAAGCAAACCCCATCCCCCC back to top
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