prot_P-littoralis_Contig12.85.8 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_P-littoralis_Contig12.85.8
Unique Name	prot_P-littoralis_Contig12.85.8
Type	polypeptide
Organism	Pylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length	582

Homology

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BLAST of mRNA_P-littoralis_Contig12.85.8 vs. uniprot
Match: D8LAT0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LAT0_ECTSI)

HSP 1 Score: 389 bits (999), Expect = 5.620e-126
Identity = 293/591 (49.58%), Postives = 338/591 (57.19%), Query Frame = 0

Query:    1 MLQEPELTHPH-SRRADSAPLTSSPLKKVSAADKARAKSRRNAAKEAFLSVVRETVEELAVEAASQALEEEVESAERQYHKRERSHGGSGRSHSPRRSSGRSSNGNGNPDYNNIAAAAPSSRPGHRRSNDSASGSPL-------TASSGRNASARFHVEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVYGGG---KPRGIPEEGMDEPRAXXXXXXXXXPSSWVSPSGXXXXXXXXXXXXXXXXXERAIDHEVKQFRSTGDAMADDERETLLELLSDAYGQVNDLTDELKMSLDKLSATEKELKVLAKSKSNAQLLSNPPPRNSLSDFRSAKEMDLDPNATPKRTPKPPLFKAMFNGDEGGKSTPVAVRQLQVEVQRLRQRNAQAQAKEENYKADISHMQSRLMAVMESEINKTDQDRANAAASSVSSTRSAKQQTNGEYFMTPGGTRYQDGVTTPLVARVAELEERLVACSMENATAKQEHLTAELNSQKLEKTLQKLRHELAKSRAMNDLLQNEIDRLQGQDPEEEADGSGWRRWLGGAQEPSPDEPNPIEVCGEGGDSPVVVVRDLDNDTLVYAPGRSEF 580
            M  EPEL HP  SRRA +    SS        +KA AKS RNA KEAFL+VVRETV+EL ++AA++A+EEE    E                                                 + S DSA GSP        TA SGR +S   H  G                                    +GGG    P  IPEEG    R+          S    P               XXXX      E   FR+T + M DDERETLL LL+ AYGQVNDLTDELK+SLDKL+ TEKELK +  + +  Q + NP P  SL+    A    +    TPKR+P   L K +F  DEGG+STP AVRQLQVEVQRLRQRNAQA +KEE YK++I+H++ RLMAVMES++   D D A+A +S    +RSA+Q        T GG   QDG T PLVARVAELEE+LV CSMENATAKQEHLT++L SQKLEKTLQKLRHELAKSRAMNDLLQNEIDRLQG DPE EADGSGWRRWLGG QEP   EPNPI+V G G DSPVVVVRDLDN+ LVYAPGRS+F
Sbjct:    1 MPPEPELAHPSFSRRASNTSAASSSXXXXXX-EKAHAKSLRNAGKEAFLTVVRETVQELGLDAANEAIEEEAIRMEEM-----------------------------------------------QTSQDSACGSPFRSSTSSRTAGSGRRSSTGGH-HGVGVDTAEPSERRRRRHRKSSMAQGEGQSIVAAAMANFGGGVDANPGAIPEEGRVLSRSFQG-------SDSADPGDDSAAAEAAVGRPAXXXXXXG--GEATSFRNTAETMEDDERETLLALLTGAYGQVNDLTDELKISLDKLNDTEKELKAVNAAHAKLQAMPNPSP-TSLNGQSGAHAEGV----TPKRSPVSKLLKDVFPNDEGGRSTPAAVRQLQVEVQRLRQRNAQAHSKEEKYKSEIAHLK-RLMAVMESQVANADPDLASANSSR---SRSARQ------MSTAGGAHSQDGATKPLVARVAELEEKLVVCSMENATAKQEHLTSQLASQKLEKTLQKLRHELAKSRAMNDLLQNEIDRLQGHDPEGEADGSGWRRWLGGVQEPLSPEPNPIQVTG-GSDSPVVVVRDLDNNQLVYAPGRSQF 517

The following BLAST results are available for this feature:

BLAST of mRNA_P-littoralis_Contig12.85.8 vs. uniprot

BLAST of mRNA_P-littoralis_Contig12.85.8 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
D8LAT0_ECTSI	5.620e-126	49.58	Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 57..84
None	No IPR available	COILS	Coil	Coil	coord: 279..299
None	No IPR available	COILS	Coil	Coil	coord: 458..520
None	No IPR available	COILS	Coil	Coil	coord: 365..399
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 307..322
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 516..558
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 69..89
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 197..211
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 123..144
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 91..114
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 304..343
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 244..266
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..44
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 217..233
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 166..180
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 64..266

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-littoralis_Contig12	contig	P-littoralis_Contig12:401962..414524 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Pylaiella littoralis U1_48 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_P-littoralis_Contig12.85.8	mRNA_P-littoralis_Contig12.85.8	Pylaiella littoralis U1_48	mRNA	P-littoralis_Contig12 401205..421680 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_P-littoralis_Contig12.85.8 ID=prot_P-littoralis_Contig12.85.8|Name=mRNA_P-littoralis_Contig12.85.8|organism=Pylaiella littoralis U1_48|type=polypeptide|length=582bp
MLQEPELTHPHSRRADSAPLTSSPLKKVSAADKARAKSRRNAAKEAFLSV
VRETVEELAVEAASQALEEEVESAERQYHKRERSHGGSGRSHSPRRSSGR
SSNGNGNPDYNNIAAAAPSSRPGHRRSNDSASGSPLTASSGRNASARFHV
EGGGGGGGGESSDRQQQQQQRRRRQGGEQGNRREAAPVYGGGKPRGIPEE
GMDEPRAAAAASHRRRPSSWVSPSGSSPSGSQDAAAAAAAAAERAIDHEV
KQFRSTGDAMADDERETLLELLSDAYGQVNDLTDELKMSLDKLSATEKEL
KVLAKSKSNAQLLSNPPPRNSLSDFRSAKEMDLDPNATPKRTPKPPLFKA
MFNGDEGGKSTPVAVRQLQVEVQRLRQRNAQAQAKEENYKADISHMQSRL
MAVMESEINKTDQDRANAAASSVSSTRSAKQQTNGEYFMTPGGTRYQDGV
TTPLVARVAELEERLVACSMENATAKQEHLTAELNSQKLEKTLQKLRHEL
AKSRAMNDLLQNEIDRLQGQDPEEEADGSGWRRWLGGAQEPSPDEPNPIE
VCGEGGDSPVVVVRDLDNDTLVYAPGRSEFM*