mRNA_P-littoralis_Contig811.26.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig811.26.1
Unique NamemRNA_P-littoralis_Contig811.26.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig811.26.1 vs. uniprot
Match: A0A6H5K678_9PHAE (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K678_9PHAE)

HSP 1 Score: 211 bits (537), Expect = 3.080e-58
Identity = 143/311 (45.98%), Postives = 168/311 (54.02%), Query Frame = 1
Query:  316 PKVITKKKNKCDFCVKRKRPCDGLGFKHCSFCIAKNRPECRYSHR-LPTPSRVATTKTFTRSTDMGENVAHASQLPPPQLSDQRSWHADG-ANAIQGERHH-------TATGP--LPLPLKRGQFSASPATGLIGLQENGFLSDFFDCLGFLSLASESGVRTAIFSVMHAAEPE-EFGATTSP---------PLHVAEGAIQCLVDGGNLSGGHWDQAVPAGGGPLLHDSSTCLLWCAVGLGALVRGCPLTHVEGYVDLAQVSLTHCFDGITLDSARAYLAMAVLHDFLGNQTKSHGYLESATSIVRVLPP 1185
            P+ I  KK+ CDFC KR++ CDG   + CSFCI K RPEC YS R LP+ S     KT T     GE  A     P P LS +     D  ANA  G +H        TA G   L LP KR + SASPATGL GL EN  L DFF CLGFLSLA+ES +R A+ SVM A     + GATT                    +  V         W  AV      L  D+STC+LWCA+ LGALVRG PL HV+ YV LA+ +L  C     LD ARA LAMA +H+FLG+Q  +H Y+E A SIV  LPP
Sbjct:   95 PQTIVLKKS-CDFCFKRRKRCDGRAQRRCSFCIEKGRPECHYSMRSLPSKS-----KTPTVVPTSGEEDAVRDDSPSPGLSLRARAEVDNDANADTGAQHTAKKKGSGTAVGVTGLVLPFKRARLSASPATGLAGLLENELLGDFFGCLGFLSLATESIIRGAMVSVMRANNVLIQQGATTPARPXXXXXXXXXXXXXDTEETPVSSVRTEEACWRNAVTTEDAALPRDASTCILWCAIALGALVRGYPLPHVQRYVHLAKDTLASCSASAALDMARANLAMAFVHNFLGDQVNNHRYVELANSIVSALPP 399          
BLAST of mRNA_P-littoralis_Contig811.26.1 vs. uniprot
Match: D7FTE0_ECTSI (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTE0_ECTSI)

HSP 1 Score: 162 bits (409), Expect = 4.550e-40
Identity = 113/296 (38.18%), Postives = 150/296 (50.68%), Query Frame = 1
Query:  346 CDFCVKRKRPCDGLGFKHCSFCIAKNRPECRYSHRLPTPSRVATTKTFTR--------STDMGENVAHASQLPP-PQLSDQRSWHADGANAIQGERHH-TATGPLPLPLKRGQFSASPATGLIGLQENGFLSDFFDCLGFLSLASESGVRTAIFSVM-HAAEPEEFGATTSPPLH-VAEGAIQCLVDGGNLSGGHWDQAVPAGGGPLLHDSSTCLLWCAVGLGALVRGCPLTHVEGYVDLAQVSLTHCFDGITLDSARAYLAMAVLHDFLGNQTKSHGYLESATSIVRVLPPERLP 1197
            C FC KRKR CD      CS CI K +P C Y  + P P R A      R        S+D   +   AS+     +  +  S+   G  A    R   T  G + L  KR + S+SPATGL+G+ ENGFL DFF C G L L +ES VR A+  VM      + +  T    +  +AE   +    GG L+  H     PA           C++WCA+ LGAL+RG  + HV GYV LA  SLT CFDG +++ ARAYL M+ LH  +G++ K+  Y+  A +IV  L PE +P
Sbjct:   58 CTFCAKRKRACDSQR-PRCSLCIEKKQPYCHYPLK-PLPKRAAAKPAAARRLSSSSPSSSDCSISSGDASKAKRLAEAQEGASYDTGGVLATVNTRSMPTVRGRMSL--KRCRLSSSPATGLVGMPENGFLCDFFGCFGILPLTTESTVRNAMVEVMMRQCGGQAYSGTGGSGMEGLAEDEEKDWHGGGALARRHTLPDHPA----------KCMMWCAIALGALMRGISVEHVMGYVQLAWKSLTECFDGRSVEHARAYLIMSFLHRVIGDEDKNERYMSFAVNIVSKLRPEDVP 339          
BLAST of mRNA_P-littoralis_Contig811.26.1 vs. uniprot
Match: A0A6H5L0W7_9PHAE (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0W7_9PHAE)

HSP 1 Score: 161 bits (407), Expect = 8.660e-40
Identity = 113/299 (37.79%), Postives = 153/299 (51.17%), Query Frame = 1
Query:  346 CDFCVKRKRPCDGLGFKHCSFCIAKNRPECRYSHRLPTPSRVATTKTFTRS--------TDMGENVAHASQLPPPQLSDQRSWHADGANAIQG--ERHHTATGPLPLPLKRGQFSASPATGLIGLQENGFLSDFFDCLGFLSLASESGVRTAIFSVM-HAAEPEEFGATTSPPLH-VAEGAIQCLVDGGNLSGGHWDQAVPAGGGPLLHDSSTCLLWCAVGLGALVRGCPLTHVEGYVDLAQVSLTHCFDGITLDSARAYLAMAVLHDFLGNQT---KSHGYLESATSIVRVLPPERLP 1197
            C FC KRKR CD      CS CI KN+P C Y  + P P R A   T  R         +D   +   AS+    +L++     + GA ++    +     T    + LKR + SASPATGL+G+QENGFL  FF CLG L L +ES VR A+  VM      + +  T    +  +AE   +    GG L+  H     PA           C++WCA+ LGAL+RG P+  V GYV LA+ SL  CFDG +++ ARAYL M+ LH  + ++    K+  YL  A +IV  L PE +P
Sbjct:   58 CTFCAKRKRSCDSRR-PRCSLCIEKNQPHCHYPLK-PLPKRAAAKPTAARRLXXXXXXXSDCSISSGDASKAK--RLAEAHEVASYGAGSVLATVDTRSMPTVRGRMSLKRCRLSASPATGLVGMQENGFLGAFFGCLGILPLTTESTVRNAMVEVMMRQCGGQAYSRTGGSGMEGLAEDEEKGWCGGGALARRHTLPDHPA----------KCMMWCAIALGALMRGVPVERVTGYVQLARESLADCFDGRSVEHARAYLIMSFLHSIIHDKAIDDKNERYLSFAVNIVSKLRPEDVP 342          
BLAST of mRNA_P-littoralis_Contig811.26.1 vs. uniprot
Match: A0A6H5L0K0_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0K0_9PHAE)

HSP 1 Score: 144 bits (363), Expect = 6.360e-34
Identity = 102/299 (34.11%), Postives = 140/299 (46.82%), Query Frame = 1
Query:  346 CDFCVKRKRPCDGLGFKHCSFCIAKNRPECRYSHRLPTPSRVATTKTFTRS--------TDMGENVAHASQLPPPQLSDQRSWHADGANAIQGERHHTATGPLPLPLKRGQFSASPATGLIGLQENGFLSDFFDCLGFLSLASESGVRTAIFSVMHAAEPEEFGATTSPPLHVAEGAIQCLVDGGNLSGGHWDQAVPAGGGPLLHDSST-------CLLWCAVGLGALVRGCPLTHVEGYVDLAQVSLTHCFDGITLDSARAYLAMAVLHDFLGNQTKSHGYLESATSIVRVLPPERLP 1197
            C FC KRKR CD    +    CI KN+P C Y  + P   R A   T            +D   +   AS+      + + + +  G      +     T    + LKR + S+SPATGL+G+ ENGFL DFF CLG L L +ES VR A+  VM               +    G +     G  + G   D+     GG  L    T       C++WCA+ LGAL+RG P+  V GYV LA+ SL  CFDG +++ ARAYL ++ LH     + K+  Y+  A +I   L PE +P
Sbjct:   58 CTFCAKRKRACDSQKPRCRVLCIEKNQPHCHYPLK-PLLKRAAAKPTAAXXXXXXXXXXSDCSISSGDASKAKRLAEAPEVASYGTGGVLATVDTRSMPTVRGRMSLKRCRLSSSPATGLVGMPENGFLCDFFGCLGILPLTTESTVRNAMVEVM---------------MRQCGGQVYSGTGGSGMEGLAEDEEKGWRGGGALARRHTLPDHPAKCMMWCAIALGALMRGVPVERVTGYVQLARESLADCFDGRSVEHARAYLIVSFLH-----RGKNERYMSLAVNIASKLRPEDVP 335          
BLAST of mRNA_P-littoralis_Contig811.26.1 vs. uniprot
Match: D7FTC3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTC3_ECTSI)

HSP 1 Score: 142 bits (359), Expect = 7.710e-34
Identity = 80/200 (40.00%), Postives = 114/200 (57.00%), Query Frame = 1
Query:  634 LPLKRGQFSASPATGLIGLQENGFLSDFFDCLGFLSLASESGVRTAIFSVMHAAEPEEFGATTSPPLHVAEGAIQCLVDGGNLSGGH-WDQAVPAGG-----------GPLLHDSSTCLLWCAVGLGALVRGCPLTHVEGYVDLAQVSLTHCFDGITLDSARAYLAMAVLHDFLGNQTKSHGYLESATSIVRVLPPERLP 1197
            +PLKR + S SPATGLIGL+EN ++ DFF  +GFL + SES +R A+ S M     E       P              GG + GGH W ++    G             + + ++ C+LW  VG+G L+RG P + VEGYV LA+ +L+ CFD  T ++ARA+ AMA+  DF+GN+ K   Y++ A SI+  LPPE++P
Sbjct:   28 IPLKRARLSPSPATGLIGLKENAYIGDFFQTMGFLPITSESFIRKAMVSTMFRTMQERDPEFPGPEA------------GGVVGGGHGWGESALVPGXXXXXXLVRAESAVENAAAACVLWSTVGVGCLIRGRPKSSVEGYVHLAREALSVCFDDGTAETARAFTAMALFQDFMGNEDKFIKYIDFAKSIINALPPEKVP 215          
BLAST of mRNA_P-littoralis_Contig811.26.1 vs. uniprot
Match: D7FTD5_ECTSI (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTD5_ECTSI)

HSP 1 Score: 128 bits (322), Expect = 9.760e-31
Identity = 96/259 (37.07%), Postives = 126/259 (48.65%), Query Frame = 1
Query:  346 CDFCVKRKRPCDGLGFKHCSFCIAKNRPECRYSHRLPTPSRV----ATTKTFTRSTDMGENVAHASQLPPPQLSDQRSWHADGAN--AIQGERHHTATGPLPLPLKRGQFSASPATGLIGLQENGFLSDFFDCLGFLSLASESGVRTAIFSVMHAAE-------PEEFGATTSPPLHVAEGAIQCLVDGGNLSGGHWDQAVPAGGGPLLHDSSTCLLWCAVGLGALVRGCPLTHVEGYVDLAQVSLTHCFDGITLDSAR 1083
            C  C +RKR CD      CS+CI K RP C Y  +  T        + + TF+ S   G N A     PP   S        G    A   +     T P    +KR +  ASPATGL+G++E+GFL DFF C G L L +ES VR A+  +M  AE        E  G  T       EG  +        SG   D+ V   G    H ++ C++WCA+ LGAL+RG P+ HVE YV+LA+ SL  CFDG +++ AR
Sbjct:   43 CMLCARRKRACDSRK-PRCSYCIEKKRPYCFYRLKSATKPGAEGPPSLSSTFSASWG-GVNTAMRPANPPRVASH------GGVEVLATAADIWSMPTVPEYPSIKRCRLRASPATGLVGMKESGFLCDFFGCFGILPLTTESTVRNAMVEIMMGAELPRKRYNEEHLGVRTRWAEDEGEGEEK------GCSG---DRTVVRRGTQPDH-AAMCMMWCAIALGALMRGVPVEHVEMYVNLARESLAECFDGRSIEHAR 283          
BLAST of mRNA_P-littoralis_Contig811.26.1 vs. uniprot
Match: D8LSE2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSE2_ECTSI)

HSP 1 Score: 134 bits (336), Expect = 1.270e-30
Identity = 115/325 (35.38%), Postives = 136/325 (41.85%), Query Frame = 1
Query:  508 GENVAHASQLPPPQLSDQRSWHADG-ANAIQGER-------HHTATGP--LPLPLKRGQFSASPATGLIGLQENGFLSDFFDCLGFLSLASESGVRTAIFSVMHAAEP-EEFGATT-SPPLHVAEGAIQCLVDGGNLSGGH--------WDQAVPAGGGPLLHDSSTCLLWCAVGLGALVRGCPLTHVEG-------------------------------------------------------------------------------YVDLAQVSLTHCFDGITLDSARAYLAMAVLHDFLGNQTKSHGYLESATSIVRVLPP 1185
            GE  A     PP  +S      AD  ANA  G +         TA G   L LP KR + SASPATGL GL EN  L +FF CLGFLSLA+ES VR A+ SVM A+    + GATT + P    +GA     D    +           W +AV      L  D+STC+LWCA+ LGALVRG PL HV G                                                                               YV LA  +L  C     LD ARA LAMA +H+FLG+Q K+H Y+E A SIV  LPP
Sbjct:   13 GEEDAVRDDSPPTGVSFWAGAEADNDANADTGTQPTAKKKGSETAVGVTGLVLPFKRARISASPATGLAGLLENELLGEFFGCLGFLSLATESIVRGAMVSVMRASNGLNQRGATTPARPRPATDGAWLVEEDDTEEAPASSVRTEEACWRKAVTTEDAALPRDASTCILWCAIALGALVRGYPLPHVGGNSNAALWWLKQGAEGMSRQCWTPFSIGYVARNPSRYPFESCCRRRNKSATPLPTPVFLVLCSNELYAWPSSIAEQQVQRYVHLATDTLASCSASAALDIARANLAMAFVHNFLGDQVKNHRYVELANSIVSALPP 337          
BLAST of mRNA_P-littoralis_Contig811.26.1 vs. uniprot
Match: A0A6H5J7P2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J7P2_9PHAE)

HSP 1 Score: 134 bits (337), Expect = 1.460e-30
Identity = 79/189 (41.80%), Postives = 112/189 (59.26%), Query Frame = 1
Query:  646 RGQFSASPATGLIGLQENGFLSDFFDCLGFLSLASESGVRTAI----FSVMHAAEPEEFGATTSPPLHVAEG-AIQCLVDGGNLSGGHWDQAVPAGGGPLLHDSSTCLLWCAVGLGALVRGCPLTHVEGYVDLAQVSLTHCFDGITLDSARAYLAMAVLHDFLGNQTKSHGYLESATSIVRVLPPERLP 1197
            R + S SPATGLIGL+EN ++ DFF  +GFL + SES +R A+    F  M   +PE  G          +G     LV GG   GG   +A  A    + + ++ C+LW  VG+G L+RG P + VEGYV LA+ +L+ CFD  T ++ARA+ AMA+  DF+GN+ K   Y++ A SI+  LP E++P
Sbjct:   20 RARLSPSPATGLIGLKENAYIGDFFQTMGFLPITSESFIRKAMVNTMFRTMQERDPEFAGPEAGGVFGGGQGWGEHALVPGGG--GGGLARAENA----IENAAAACVLWSTVGVGCLIRGRPKSSVEGYVRLAREALSVCFDDGTAETARAFTAMALFQDFMGNEDKFIKYIDFAKSIINALPQEKVP 202          
BLAST of mRNA_P-littoralis_Contig811.26.1 vs. uniprot
Match: A0A6H5K8L6_9PHAE (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8L6_9PHAE)

HSP 1 Score: 130 bits (328), Expect = 2.180e-29
Identity = 94/284 (33.10%), Postives = 127/284 (44.72%), Query Frame = 1
Query:  337 KNKCDFCVKRKRPCDGLGFKHCSFCIAKNRPECRYSHRLPTPSRVATTKTFTR---STDMGENVAHASQLPPPQLSDQRSWHADGANAIQGERHHTATGPLPLPLKRGQFSASPATGLIGLQENGFLSDFFDCLGFLSLASESGVRTAIFSVMHAAEPEEFGATTSPPLHVAEGAIQCLVDGGNLSGGHWDQAVPAGGGPLLHDSSTCLLWCAVGLGALVRGCPLTHVEGYVDLAQVSLTHCFDGITLDSARAYLAMAVLHDFLGNQTKSHGYLESATSIVRVL 1179
            K  CD CV RK  C G        C ++   EC +S R P   R  + ++ +         E V H  +   P  S    W                        KR + SASPATGL+G++EN  LS FF C GF  L  ES VR AI  V+     E      + P                   G W  + P  G      +STC LWCAV +GALV+G P   V  Y+ LA+ S++HCFD +T+++ARA++ MA L++FL N+     YLE A  ++  L
Sbjct:   26 KKSCDLCVARKVKCSGAT----PLCTSRG-SECHFSRRRPNRPRRYSKRSISGLGYRNGAKEGVVHQGKAEMPIAS----W------------------------KRARLSASPATGLVGMKENELLSSFFICFGFFPLTHESLVRGAIMEVVLVRPVEAEDVAQTRPA------------------GAWGNSEPRQG---TDAASTCTLWCAVAIGALVQGQPTERVTDYLILARTSVSHCFDMVTVETARAFMMMAYLYNFLRNEKMFQRYLEFARGVMERL 255          
BLAST of mRNA_P-littoralis_Contig811.26.1 vs. uniprot
Match: D7FTD4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTD4_ECTSI)

HSP 1 Score: 124 bits (312), Expect = 2.310e-27
Identity = 73/179 (40.78%), Postives = 99/179 (55.31%), Query Frame = 1
Query:  643 KRGQFSASPATGLIGLQENGFLSDFFDCLGFLSLASESGVRTAIFSVMHAAEPEEFGATTSPPLHVAEGAIQCLVDGGNLSGGHWDQAVPAGGGPLLHDSSTCLLWCAVGLGALVRGCPLTHVEGYVDLAQVSLTHCFDGITLDSARAYLAMAVLHDFLGNQTKSHGYLESATSIVRVL 1179
            KR + SASPATGL+G++EN  L+ FF CLGF  L  ES VR AI  V+        GA    P   A               G W ++ P  G      +STC LWCAV +GALV+G P      Y+ LA+ S++HCFD +T+ +ARA++ MA L++FL N+   H YL+ A  ++  L
Sbjct:    7 KRARLSASPATGLVGMKENELLNSFFSCLGFFPLTHESLVRGAIMEVVLV---PPVGAEDVAPTRPA---------------GAWGKSEPRQG---TDAASTCTLWCAVAIGALVQGQPTERATDYLHLARRSVSHCFDMVTVKTARAFMMMAYLYNFLRNEQMFHRYLQFAKGVMERL 164          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig811.26.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K678_9PHAE3.080e-5845.98Zn(2)-C6 fungal-type domain-containing protein n=1... [more]
D7FTE0_ECTSI4.550e-4038.18Zn(2)-C6 fungal-type domain-containing protein n=1... [more]
A0A6H5L0W7_9PHAE8.660e-4037.79Zn(2)-C6 fungal-type domain-containing protein n=1... [more]
A0A6H5L0K0_9PHAE6.360e-3434.11Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
D7FTC3_ECTSI7.710e-3440.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FTD5_ECTSI9.760e-3137.07Zn(2)-C6 fungal-type domain-containing protein n=1... [more]
D8LSE2_ECTSI1.270e-3035.38Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5J7P2_9PHAE1.460e-3041.80Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K8L6_9PHAE2.180e-2933.10Zn(2)-C6 fungal-type domain-containing protein n=1... [more]
D7FTD4_ECTSI2.310e-2740.78Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig811contigP-littoralis_Contig811:54334..75156 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Model size1201
Hectar predicted targeting categoryother localisation
Exons8
Cds size1023
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig811.26.1prot_P-littoralis_Contig811.26.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig811 68587..75156 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791666.1617408-UTR-P-littoralis_Contig811:54333..545061680791666.1617408-UTR-P-littoralis_Contig811:54333..54506Pylaiella littoralis U1_48UTRP-littoralis_Contig811 54334..54506 +
1680791666.1761274-UTR-P-littoralis_Contig811:68582..685861680791666.1761274-UTR-P-littoralis_Contig811:68582..68586Pylaiella littoralis U1_48UTRP-littoralis_Contig811 68583..68586 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791666.1915689-CDS-P-littoralis_Contig811:68586..688111680791666.1915689-CDS-P-littoralis_Contig811:68586..68811Pylaiella littoralis U1_48CDSP-littoralis_Contig811 68587..68811 +
1680791666.201418-CDS-P-littoralis_Contig811:71788..720331680791666.201418-CDS-P-littoralis_Contig811:71788..72033Pylaiella littoralis U1_48CDSP-littoralis_Contig811 71789..72033 +
1680791666.2118244-CDS-P-littoralis_Contig811:72452..725601680791666.2118244-CDS-P-littoralis_Contig811:72452..72560Pylaiella littoralis U1_48CDSP-littoralis_Contig811 72453..72560 +
1680791666.2205894-CDS-P-littoralis_Contig811:73161..734141680791666.2205894-CDS-P-littoralis_Contig811:73161..73414Pylaiella littoralis U1_48CDSP-littoralis_Contig811 73162..73414 +
1680791666.2327857-CDS-P-littoralis_Contig811:74228..743021680791666.2327857-CDS-P-littoralis_Contig811:74228..74302Pylaiella littoralis U1_48CDSP-littoralis_Contig811 74229..74302 +
1680791666.245892-CDS-P-littoralis_Contig811:74553..745991680791666.245892-CDS-P-littoralis_Contig811:74553..74599Pylaiella littoralis U1_48CDSP-littoralis_Contig811 74554..74599 +
1680791666.262569-CDS-P-littoralis_Contig811:75084..751561680791666.262569-CDS-P-littoralis_Contig811:75084..75156Pylaiella littoralis U1_48CDSP-littoralis_Contig811 75085..75156 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig811.26.1

>prot_P-littoralis_Contig811.26.1 ID=prot_P-littoralis_Contig811.26.1|Name=mRNA_P-littoralis_Contig811.26.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=341bp
MMFGDPRWQSSTFGAEILSPRPPPAAAAEAAAEISAKEPVAREWITPKVI
TKKKNKCDFCVKRKRPCDGLGFKHCSFCIAKNRPECRYSHRLPTPSRVAT
TKTFTRSTDMGENVAHASQLPPPQLSDQRSWHADGANAIQGERHHTATGP
LPLPLKRGQFSASPATGLIGLQENGFLSDFFDCLGFLSLASESGVRTAIF
SVMHAAEPEEFGATTSPPLHVAEGAIQCLVDGGNLSGGHWDQAVPAGGGP
LLHDSSTCLLWCAVGLGALVRGCPLTHVEGYVDLAQVSLTHCFDGITLDS
ARAYLAMAVLHDFLGNQTKSHGYLESATSIVRVLPPERLPT
back to top

mRNA from alignment at P-littoralis_Contig811:54334..75156+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig811.26.1 ID=mRNA_P-littoralis_Contig811.26.1|Name=mRNA_P-littoralis_Contig811.26.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=20823bp|location=Sequence derived from alignment at P-littoralis_Contig811:54334..75156+ (Pylaiella littoralis U1_48)
TACGTGTGTGGGGCACCGACGAACGATCCTCCTCCCCTTCGCCTTGTACA TGCCGGCCAAGATTTCCTTCTGCCCACCGCTGGTCGCGTCCGTGCAGCCT GCTGGTGCTTTGCCGTGTCTTTTCACCGCTCGCTACCTGGTTAGAGCAGG TCGCAGGCTGTAACAGCTGTACTGTAGCAGGAGCAAGAGCAGCAGCAGCA GCGGGAGGAGCGTCAAAATTTACAGGACCTGATGTTTTCGGTTGTGGTGC AGCAACACCACACTGCTGGATTCGTCACCACCTCTGTTCGCGGAAGATCC AGGACCAGGACCTTGCCCCCTCCCGGCAGCAGCCGCTATAATGGTAGTCG CGACTCTCACGGCCTCCGCGTGGCAACGCACCGAAGCTTCGGTACTGCTG TGGGTTGGGCAGAACCTGTCCCACTCACAGCAGTAGTGCCGGTTGGGATT TTTAGAAGAAAACATTTTTTTGGGCACATTTCCCTGAATCCCGTCCCTTT CATCCCAGGCTTCTCATAACGTTTGCCTTCAACACAACCATGACACGGTA AGCGCAATTGAGACCCTCTTTGGCCGCGGCGGGGCCTCCCGTGCAAGCCG TTTCCATGAATCGTGCTGTCGGTGTGATCTCTTCCAAAAGTGACGGTTTC GTGTCGGTTGGTGTTCTACAATCTATAGTAGCTCTACAGATCCGTTCGAC TACACATCATCTGTTGTCGTGTGCGTGCAAGAGCCGTGAGGCGCGAGGCT TACTTTCTCTTCTCTCTTTCTTGTCTCCCTCGCGGGTGTGTGAGTCAACT GATAATGAACGAAGCAAACATAAATAAATGCCATCCGACGACGTGGTTGC ACCAACACGTGCGGCGTGCACAGCAGCTGCTGGCGGTGAGGTCATGGCTC AACCAATTAGACGGAGCAGATCAGTCCGTCTTGGTTGACAGTCTCGCCTG AAAAAATACTTGGTTTTTTTTTGCTGTGGCTGTCGGTAACTCCCCCGTTC ACTTAATGACGAAAACTAAACAAAAAAAGTAGCCGCCTGAAACACGTTGT GAGGTGTGTATTTGCTGTGCCTCCTTGATGACCCGCATGCCCGTGTATAA CTTCACGTACTGCTGTTAAGTCATGTTTTGATCGCCGGTTCGTTCCGCGT TACCTCAACTCCGGGACGCTGACGTGTGTGTTTCGGTGCACTGCTGCGTT CTCACGATTGAGGAGAGAGAAAAGAGAGAATGAGAGAGAAAGAGAGAGAG AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACCGAAGGGGAA CACGAAAAACTCAATTCCACACGGACTTCGGCACAGCCGAACAACTGCTA AAGTTCAGCGAGATCTGGGTCCTGATTCCACTACTGCTGTGCCACCAGGA GAGCCATGGACACACTCTGCGGTATCCCGCCTCGGATCGGATGCCGGCCT CTGCCACTAGAGGGCACGCGGCACGGGGAATGCCGGAATGCCAACCGAAA TGCAAGTGCGGCGCAATTGTGAAAGCGGCAGGAACTACCGGTAGTCGTGT GTCGGACGAGTGTGCGAGTGTTGTGTGTCGTGTGTCTCGTGTGTGACCTG TTGCTGTGAAAGTGCCAAGTCTGTATTATGTTTTTGTGCACCCGTAGTAC GGAGCACTTGCATTGCATGTTTGATGAGGAAACAGCACGGGTTCGTTTGT CCTTTTGTACTTTTGCCCATGAAGCATATGGTGGTACCAAGAAGTATCGA GTTTTCGAGTAACTTCTGGCAGCTTCCGATCGTAATTACAATTCGACAGC TGCCTTAGCGTTCCCTCGTGTCCGCGAGTGTGACACAATACCGCCCCTCC AAATGCTACAGGGTCAGCACAAGTTCTGGACACGGCTAAAGTACTGCTGT AACTTTTGCATCTCACCAGGGACAAGCGAAATCGCAGACCGCCTCTCCAT CTTTCAAGGAAGAGGGCTTGACATCACTGCTGTTGGAATGCTGCGCCGGT GCACACCGGCAGCAGAGGTTCTGCAGGAAGCTAAGAGCAGGCTTGCACGT GTTGAGCACGAAGCCAAGGCAGTAACGGCTACTTCACAGGAGCATCAGGT CAGTCCTTTCGTCCTTGTACAGCTGTACACAGCACAGCTGTAGTATTTGC CGTTCACGAACCTGGTGTGTTCACAAACAGCTGTCTGCACAACCTCTAAG CTAGCAATCATCCCTGTTGTGGATACCATGGATTTGCATCTTCCTAGGGA ATACAGGAACGCATACATAACGGACAGATTAGGAGATCTACCGGACAAAT ATAATATCCCACGATCTCCGGACCCTGGACACAGAGAATCTGGAAATGAA ATTGCGACCATGACCGGATTCGTGGGGTCAAGGAAGGTCCACGATGGCCT CCCTTGCCACACTCTCTCTACCTAGCCCTGATCGAGCTCAGCTCGGCCAT CGCTTGACATTCCTCGTCACACTGCAACGAGAGGAAACATTAGCCCACCT ACGGTAACGGGTTATAAAAGTTACCACGTCACGGGACCTTACTGTAGCGA GTAGAGGCCTTCCCACAGTGGCGTACGACGAAGTGGATAAATTTTCTCTT GGGGTTACAGTGTCACGCACACCGAACAAGAGATAATTTGAAGCATGCCT TCTTCTTCAGCTCAAAAGAAAGCGAAAAAGAGGCTGAAAGAACAGCAGCA GTCCACGCAACTTCCCAAGAAAGGAAAGCAACCGGAACGCTTATCATCGC AAGATGGAGGTGGTTCGGCTGCTGGGGAGCCGCTGACATGATCAGCAACG CCCAGAATGAGGAGTCTCACGACCAGACTCACTCGTCACCGAAGGCTCAC GACCAGCCAACGGAGGAGACCAGCGACTCCAACCTGTACACTCTTCTTAG TCGGAACGATGACTCCGAAGTAGAAGAAGACGACGAGGCGGGGTCCGCTG CCGAACAGGTTATTGGCGAAGAAGGTGAAGTAGCCGTAGAGACGTGTAGC GCCGTCTCGACGACCGCTCGCCCTCAATCGTCGACAGCTCGCGATGGCGT GCACCCGCGCTTCCAACCTGGTGGAGCAATCGAGAGCTACATTCTGGAAA AGTTCCGGCAAGCTGATGAGGAGGGGACCTCACCGCCGAAACATGTGATG CAAATGGTGACTGGCTCCACTCATGGGCCGGAAATCGATCAGGTGAACCC GAGAAACCTTGCATCTAATCTAGCAGCCGAACCTTCCGAAGTACAAGTAG CCCAACCTCCATCCTCCTCCCCTCCGCTCAACAAGAGCAAACCAGGCCAA TGATAGCGCCCACCATGCACACGATGCAACCCACTCTGCCCCAACAACAG CAGACTTCACCACAATCCATGCATCAACAACCCAACTTGTCACAGCAGCA ATCAATCGGACAAACTACTCCCGTAAACATTGCTCCGATGCAGACCGTGC ACTCTCAAGTTGGCCAATCTCAGCATGGATACCCTCACCCCGCGCACCCA GACCGCTTCACACTGAAAACGATTGACCTCCCAGCATCTCTCAAGCTCGA AGGAATAGCTTCAGAAGATGTACCTGAGTTGATGGCACTATACCGCGCCC ACATTCGCTTGCTCTCACCCGACACGACTTCGGATTCTACGATTGATCAC CGCGCTATCAAACACCTAGCGCTATTCGTACGAGGAGCAGCAGCCCAAAG TTTGAGCTTAATACTGAGTTCGAATCTTGAGTGGAGACCAGAATCCACTC TTGCAGCGATGCGTGCTCGAGGCGAACACATAATCGTTTTCCTCCACAGA CTTGGCATGACTGGGTTACAGCATTTACGACTCTGTTCGCTCCGGCGAAC CGCATCTCTCTCCTCGCTCGCGATGTCATGACTCTACAAGCCAAGCCGAA CGAATCGGTTGACATGTACGGTCTCCGAGTATCACAAGCATATTCACGAC TGCTTGCTGAAGCTCAAAGGACCACGCCCGTTGGAGTTACTGCGCACGAA CATGCGTTCAACCAAGCGTTGATAGCATCTTTCGAAAACGGTCTCCAGCC CGCGTTGCGTGTAGAAATGATAAGAGAGGATGCATCCCAATCTTTCATGG CTTCCAAAGCTCGGGCACGAAAACATGAAGCAAACCAGCTGCGATCACCA TCTCAAATTCCAACGGCTATCTCCGCCCTGCACGCTGATCCCCGTGACGC CCAGCTGAGCCAGCGCTTGTCAGACGTCGAACAAGCACTCGCGGCTCGTT CGACTCCTACCACCGGCCAAACCGGCGGACAAGCTCGCACGGTCAGCTCG ACGACCACACGGACCACGCAGCAGCGCGACAACAACCGCGGAAGATCGCA GACCCGCGAAAGATCGGCATCGAAGAGTCGTAAAGAGACACATAACAAAT CAGTCTCTTTTGCCGACAAGGTCAAGGGAACCAAGGAATGCACGTACTTG GCGTGCCAGAATTCAGAGAGGCGCTTCTCGCACACGATAGATGAATGTCG TATTGCGGCGAGCCACAAGAAGGCTGGTCTCATTTTGAAGAAAGCGTAGG GGGTGCCCGCGTCGGCACAGTTCCTCTGCCAACACGGGACAACATTTGTC ACTTGAGTCAGAAATTGATCTAGCAAGTCAAAGAGTCAAGGTAGACAAGA GGGATACTACACACAAAACTAGTGTGGCGTCCCTGGCGGAAGTAAAGCAG CAGTGCACAAATAATGCACGAGAGAAGCGTTCAGCAGAAGGGGTACTGGA AAAGAGTTCAGTAGCTGTCGCATCATCATCAGTAGTGCGTAGCAGAAAGA AGAAAAGTAACACGTCAGCTCAAATACTGCCTGCCTTGTCGACTGCTGTA GCCAGGTTAGCGCCACAGGCCCAATACGTAACTACTGTTGATAGAAGGTC GAAGCACCGGTCGAAAGTAATAGCCGGTATGCAAAATAATGACGAATTTG CCGCTTTCCACATGTCTTCGCTGGCTGGATACCCTACCTGTCCAGCAGTG CGCAACGCAACCTCGATGAGAGTACGCGTTCCCGCCAGGGTAAATAATCA CCCGGCCGGTCTAATAACAGTAGACACGGCGTGTGATATTCCGTGTGTTT CAAGAAAATTCATGCGAACTCACACAACTTTGAGGGAGACGGAAATATAC CCCGTCCCTCCCGGAGCAATCAACCTACGAAGTGCTGATGGCTCTCCCCT GAAAATACAGGGATATACCCGATTCGATCTTACACTGGGAGAAATTACCC TACCTGTTGAAGTACTAGTGTTGCCGTCGTTGGGTCCCGATAATATGTTA CTTGATAATAGTATCATGGGAGCGTTCGGTGGAGTCTTGGATTGGCATGC AGAAGAATTGTCATTCAAGACATCAAAGATTAAAATACCCGCCACCCATC GCAAAACAAGCAACCCTCCGACACAAGAATCAAATGAAATGAACTGCTCT GTAGTGGCAGTCACCGGCAACACTCCAGCAGTGCCTGTCTATCTCAGCAA ACGATGCTGTATCCCTGCACAACACGAAATCGCGGTAGAAATATATTCTC ACGAAGCACCAACAGAAACAACTGCTGCTCTCGTTGAACCGCGTATTGTC ACAACGGATGACATAGGCAAGTCAGATACACCGACAGCCTTCCGCAGGAT AGTGATAGCTCGCACCGTCTGTAATTGGACAGCTCATACGAAACAAGCAG TGGTACAAATTGCCAACCCGTCCAATCGACAGGTATACCTTGAACGAAAT ACACTTGTCGGACACATCTCCCCAGTGAAATCAGTACTGCCACAAACTAA CAGCAGTGTTGCATCGAGTCCAGAACAAACGAAGATAATTCGTGCTGAAC TTCAACAGGCACTAGCCAAAGCGTTCAGAGAAACTACTTTTTCACCAAGT CAATGTGAAGATATACTACAACTGTGCACTAAATACCGCTCAGTGTTTTC GTTGACACCTGATGAACTAGGGAAATGCACAATTACCGAAGCAGACTTTC CCCTTGAACCAGGAACACGCCCAGTAAATCGAGCACCATACCGAGCTAAC CCAAGAGTTCAAGAAGTGATCGATAAATGTGTTGGTGAAATGGAGAAAGC GGGCATTGTCGAAAAACGAGCCAGCCCGTGGGGATCAGCTGTAACACTGG TAGCGAAAGCTGACGGCACACCCCGATTTTGTGTTGATTTTAGAACGACG GTCAACAAGAATCTAATAAAGAAATCGTGGCCCATGCCTGAAATGGCGAG TCACATCGATACAGTCGCAGGAGCGAAGTTTATTACCGTTTGCGACGTGC AGAGTGCATATCACCAAATACCTATTGCAGAAGCAGAACAAGATAAAACT GCTTTTGTAACACGAAATGGAAAATGGGTTTTTAAACGACTACCTTTTGG CATTGCCAACGCCCCTTTCCTTTTTCAGCGAACAATGGCATTAGCGTTTG CACACTTCGGACCGAAATCTGGCCTCCTCGTATACATGGATGACCTTATT TGTTGTTCATCTACATGGGAAGGACATTTGAATCTGCTGGAAAATACTTT CCAAGCTTTACAAGCAGCAGGTCTCACCTTAAAACCATCCAAGGTGCAGT TCGGACCCGAAGAAGTAAAATACTTGGGGCACATTCTCTCATCCAAAGGA ATACGTTTGGGAGATGATCGGATTAAAGCAATAGTAGACTTGCCGAAGCC AACCAATATCAAAGAATTACGATCAGTTTTAGGCATGGTTAACTACGTCC GGAAGTTTATCCCTGACCTAGCTACCATTACTGAGCCCATGGTTGAACTC ACAAAGAAAGAATCAATGAAGTATGTGGCTAAACGCTGGGGTCCGGAACA CGATGAAGCGTTTGCTGAGGTGAAAAAACGACTCACCCAAGCACCTGTTC TACACTTTCCGGACTTCTCTAAAGAATTCGTCATCCACGTAGATGCCTCC GAGACAGGAGCAGGAGCTTTCCTGGCGCAAAAGAATGGTAATGAAACCAA TATTATTGCGTACTTTAGCCAGCGATTCAACAAGAGTCAACGCCACTACT CAGCTTCAATGAAAGAGTGCTTCGCTGTTGTTCTAGCAATACAACATTGG AGACCATACTTATGGGGACGGCATTTTACATGCGTCACTGATCACGCGGC TTTACGGTACCTGTACACGATGCAGGATACGTCTAACATGCTCACACGAT GGGCTATTGCACTCCAATCGTTCGATTTCACGGTACAACATAAACCAGGG CGCTTGCATATCGTACCAGACACACTATCGCGTCTTTTTGCATTCCAGAC TGAACAGGATCGAATTGCGCCTTGTCTTGCTCCGATTTGTCGCAACGTGC CAGATGACCCCAAGTTGCAAACAGACATACCTAACAGACCGTACCAAGTG TCCATCGACAAACTCAGCGATGTGCAACCTGTCCGTAGCGACAGAGAGCT GTTTACCGTCAATTCTGCTTTTGTCAGTGCCACACAGGTTTTCGACTCTG TTGATCAGGAAGTCTTACGCGAAAAACAAGCCGAAGAATATGGTGAATAC GTCAGATATATTCTGCGAAAGAAAGCACCACTACCGCACAACGAATCGAC ATCAACAATGTCATATTACTCCATACAAAATGGGCTTCTCTTCAAGTCTT ATTTGCCTGGACACCTCCGAAAACGAAGCACGTTTCGCGATCAGCTCGTA CTACCACAAGCTCTCACCAGTCTTGTTATACATGCTTACCACGACCATGC TCTGTCAGGAGGTCACCTTGCATTTAGACCTACGTATGAGAAAATTCGGC AGAAATACTGGTGGCCGTCAATGAATAAAGACATCCGCAACTGGTGTGAA GCGTGCCAAGCTTGCCAACGCAGAAAAACTGCACACCGCCGCCCAAAATT GCCCACAGGCAGTGTACCTGTACAACGCCCATTTGAACGGATCTCCGTAG ACTTGGTAGAATACAAATCACTATCAATGTCTGCCGCAGGTGTACAATGC AAATATGTGCTGTCCATGATGGATCACCTTACTCGTTTTGCAGTGTTAAC ACCCATTCCGAATAAAGCTGCCGATACTGTAGCTAGAGCAATCATTGACA GGATTATCAGTGTTTTTGGCCCACCTGAAATACTTCACTCGGACCAAGGC ACCGAATTCGAAAACAAAGTCATTTATCAGTTGCAAACAATTCTGGGTTA CAAGAAAACACGCACGACACCGTATCGACCTCAGGGAAATTCGGTATCGG AGCGGGTCCATTCTACTATGCATGCAATGCTTGCAATGCACAGTTCCATG AATCGTGACAACTGGGCAGAACTCCTGCCGTTTGTGCAACTAGCGTACAA CGTCATTTAGCGCATCCATGCACGAGACTCCGTTTTTCTTGATGTTCGGT CGCCAAGCACGCCTACCCGTCGATGTCATAATCGGAATTCCTCACGAAGG AACCACAGGAGATACCGAACAATTTGCTCAAAGCACGCGAGATAACTTAC AAATCGCATTTGAGCTCGCACGCCAAAATCTCACAGAGCGCGCTGAAAAA CATGCCGCAAACAATGCGAAGCTGAAAAACTATCCTGTTTTTGAACCAGG CCAACAAGTACTCCTGTTCAAACCATACCAGGAATCAGATGGACCAAATC CGAAACTGCTATTACCCTGGCGAGGACCATACATTATTTGCTCGCAACTT TCCCCGGTTGTATACAGAGTGAAAAAATTTGGTGACACACGAGAAACTTC CGTACACCTTGCCCATTTGAAGCAGTACCACTCACGGCAGAAACCACCAG CCCCACAATTTGATAAACTGGCTGAATTTTTCTTGGGAAAACCTATACCG CTGCCGATAACACACCAGTCTGACGAAAATCAACCGAGGATTGAAAGATA CGTCGTAGACAGAGTGGTAGGACATAAACATGGTCCAGGACGGAAGAGTC CGCACAACTACAAATACCGGTTACGTTTGAGAGGCTACGGACCCGAATCA GACTTAACTTACCGAGCACACGAAGTCCCACAATGTCATGAACTCATTTC CGCATACAGATCACAACAGGGTCTGTCTGGCTCCTCCGAAGCGAAAATCG TACATACGGCACGGAAAAGTGACGAAACGAATGATCCGAAATCGTCTGAA TCGCAAATCAAACGAATGAAACGCAAACGAGACGAAAGCGGTAGTCGTCA ATCGTCCGAATCTCAACCAAAGCCAACGAAACGCAAAAGAAACGGACAAC GTCAGCAACGCAAACAATCCACAACCAAAACGCAAGGCGATACCACTGAA ACAATGAAGAAAGACGTGAACAAAACTAGCCAAGCGTTAAATACCGTGGA TAAGTTGCGGAAGAGTAAAAGAGGACGAAAGGCAAACTTGCGATATGTAT CACGAATACACGCACGGTGAAAAGGGATAGCACCCCACTGGGCTATCCCA GCATTTGTTGGGTCAAATGCTGGCGAGGAAATGTCAAGTTATACTGGTCT CTAGGTTGGTTGTTTGTCGCGATCGATCAAACTTATTATGAGCCACAATA ACACTATGACTGTTAAATCACCGTATGCCTATACTTCACAGCTAACTAAT ACTTTAGCTGACCCAGCGGTACGATCCACGAGATCTAATCCGAAGAGAGT TGAAAACACTTGCACGACAAGTTAACTTTCGACCGTCTCATGAAGACACA ATTCTGCTTGAGCCGGGTAGACGGCGCAAGGACACCCACGAAGGATGTCG AGTTGGTAACAAACTATATAACTCCAGAAATCTATCACGTATGATCTCTG AAGTGTTTTATCCGTACGCTGTATCACGTGTGTTTTCCACACGGCAGTGT AGCTATCTTCGGGTAGTGAGGAAGGGATATTCACAGAAGAGCTGGAACTG TACAACTAGGATATGCAACCATGTTACCACTAGTCCCTCATCATTCATCA AGACCATGAATGACCGCCAAAATACCATTAAAGAAAGATGGATTTTCGGC GACAAAAGAGGGGGTCCTGTGGATACCATGGATTTGCATCTTCCTAGGGA ATACAGGAACGCATACATAACGGACAGATTAGGAGATCTACCGGACAAAT ATAATATCCCACGATCTCCGGACCCTGGACACAGAGAATCTGGAAATGAA ATTGCGACCATGACCGGATTCGTGGGGTCAAGGAAGGTCCACGATGGCCT CCCTTGCCACACTCTCTCTACCTAGCCCTGATCGAGCTCAGCTCGGCCAT CGCTTGACATTCCTCGTCACACTGCAACGAGAGGAAACATTAGCCCACCT ACGGTAACGGGTTATAAAAGTTACCACGTCACGGGACCTTACTGTAGCGA GTAGAGGCCTTCCCACACTGTGTAAAGTTATGCCAGCAATCATACCTGTG TACATAACAATGTATTCTGTCCAGTCTCACTTCGAACGCATATGTACGAT ATCATCCTTATGACACAGCAGTCTCGTAACCATGGCACATGTCACATGGT CGAGATACAACAGCCAGGAATCACAGATGAAATTTCAAACTGACGGAAAG GGAGGAAAGTTCGGGTGAATGTAAAATTTTCTATTTCGTTCGGCGGTAGC GCCGAAGTCCCGCAATATATGGAGGCTTTATTCTTGATCGGGACAGGACG GGACAGACAGTTGTTTCTCGAAATAATTTTGGTGGGACGGGAATGGTTGC TTTCTCGGGATGGATTTGGCGGGGAGGGGTAGTAGTAGTTTTTTTGTTGG GGGAAGGGGCGGTTTTTTTTTTCGACGTTGCGGGACGGGATGGTCGTTTT TATCCGTCCATTTTGTAGGTACGGTTGGTTGTGTTACAAAGTTTATTTTT TCAAGGCAGGACGAGGCGGTATTTTTTTGTTTACGTGATGGGACGGGGCG GTCGTTCCTTTTTTTTTTCGAGCGGTGGCACTAGCGGTGGACCACAAGAC GGTTGTGCGGTGGGACGGGACGGAACAACCGTCCCGCCAGCCGTCCATGT CTAGCCTTGATATTTCCACCCTCCAGAAGAGCCAAACTCTTGAAATCAAC GACACAGTGTGTGTGAGTATGTGTTACTATAAGTTTATGTTTGGCAGCAG TCGACTCACAAATCTCAATTATATACTGGTACGAAGCAGTGAAGTAAATG TTCTTCAGGAACTTGACCACCGCCGCCAATTTTCGTGAAGATGATGGTGT ACACCCTCTTTATTTACCGACTTGGCACGTAATAAGTTAACCAGGGCAAT TTGTGATTTCGAAGTACTACCTTGCGACATGTTACGCAGGCGTGGCCGAG GTCATCGCGTTGTGGTTGTGCAATAAAACTACAACGAACGCGGCGTCAGG CAATTCGACTAGGAGGGGGGAAACGATTCCTGAGGGCGAGAGTGACAGAC AGGTGCGTTGTCGATATCTACGAGATCGAGCGGGGGTTGGTTGTTGTCGC TGGTTGTCGCATGGGGTGTGAAGGGGCCTGGACCCCTGGCGGCCGACCTC AACCTCAACCTTCGCAAGCGCCATACACAAGAAAGAGCAAGAGCGAGACC GACATAGTCTACACCGACCAGCAGACATGGATACCATTAAATATCAGAGG CCCTTGAAACTTGAAACTCGTTCCCTGAAAAATAACGATCCTTTTCTTAT GATGAGTTGTAAGAATTCAGTCAGGGTGTGTATAGCTGTGTGTGCATCAT ACGATGTTTTTGTGCTATGTGTTATTTGCGATTCTTCTCTAGATCCTTGT CTGGAGAGAGGCGAGGACATCAATGCCTCCGTGCAAACTATAAACGTATA CTTCGTATATGTACCAGGTATCATAACACAGATGCGGCCACCACTCAAGA AACTCTTATGTTTTGCCCGAGGCTCAAGGCTTATTTTTTTATTTTCTCTC CAAACCCAGAAGCAACTGCGTAGATTTATACCGGAGTACTTATATTGGTT TTATTGTGGGATTTTACCTGAGCACATTGTTTCTTATTTATGTTCAATTT CTTGTTTTCAAACAATTTGAGGCTGGATTTATTTCTTAAACTGCCAGGTT CTGAAGGGGCCTCATCTGTATGATATACTATGGTACATGACCCCCCCTTC AAAAAAATGGAAGCTGACCTAAATTGGGCTGTCTACAATTTTAGGTCATT TTTGGAGGTAGTCCGTGGTACCAACTCAATGCCGGGCGTTCAAAATAAGA AGGTCTTCGTGCCAATCGGGGACGATATTTTTGGTCCTGTTTTGGGGCTG TTTCTGGGCTACTGGCGAGTACCACACCACGACGAGGTGGTCTCGCAGTC GCATGCAGAGTGTTGATAGTCTTCGACACTACTCCAAGGAAGCCTTCAGA CGAAGGAAGTGTCCACGCTCGTCATCTATCAGTCCAGAATACCATTTTTT TGCATCGCGCGATAGCCGGGGCTGGTCCGTGTACATTCCGCATGCCCTCC GCGCCACCAGAGACTGCTCGTCACAGAGATGGGAATAGTGATCAGGGATT CAAGATAGCGATATGTCCATATCTCTGGGTGTGTCGTGCAACAATCCGCT TTGCAGTCTGTGGCCTGTGCGCCGAGCATTACAGAATCTAGAGGCTTGAA AAGTTCCAGCGGGCGGCCTGTGTGGGCGGTAGGTGCGGCGAAGGTGGAgG GTAGACTCGTTCTACTTCCCAACGTCTTTTTTGTTCCTATTCTTCTTCTT TTCTATCTTCACAACCAGCAGTCTGTCATATATACATCCCCCACACAGGC CGCCCACTGGAACTTTTCAAGCCTCTAGATTCTGTAATGCTCGGCGCACA GGCCACAGACTGCAAAGCGGATTGTTGCACGACACCCCCAGATATATGGA CATATCGCTATCTTGAATCCCTGATCACTATTCCTATCTCTGTGACGAGC AGTCTCTGGTGGCGCGGAGGGCATGCGGAATGTACACGGACCAGCCCCGG CTATCGCGCGATGCAAAAAAATGGTATTCTGGACTGATAGATGACGAGCG TGGACACTTCCTTCGTCTGAAGGCTTCCTTGGAGTAGTGTCGAAGACTAT CAACACTCTGCATGCGACTGCGAGACCACCTCGTCGTGGTGTGATACTCG CCAGTAGCCCAGAAACAGCCCCAAAACAGGACCAAAAATATCGTCCCCGA TTGGCACGAAGACCTTCTTATTTTGAACGCCCGGCATTGAGTTGGTACCA CAATTGCATTTTGGAGCCAGCTTCCAATTTTTTTTTATGGGGGGTCATGT ACAATAGATGATATACTAAGCAGTACTGAGAGGAAACGAAGTTCCACAGC AGTACAGTATTGTACTCGAAACATCAAGAAAAAAGCCAAGGTGTTGCAAC TTTTGATATGAGACTTCTAGACCTAGTACAGCAAGCAGCGTGTGTGATTG ACTTGCACGGATTTCCTGGAATCCTTTCTGTTGATCTTGGAGAGAGCGTT AACGAGGAGTCGCTTTTCTGAAATGCACACGAATTAACTCGTCGACACTG AGATCCATTAGGTTTCCACACTGATAAAACAGAGTACACCTGGCAGACTA ATGGTGTATGCCGGCTGGGTTGCCTCGGAATAAACCCTTTGCCCGTGAAT TACAGACATAGTCTACCAGGTAAAAACGGTGCCTGCCTCAGTCCCGCGTC ACTCGCGCGCTCTTCTTGGACGTTAATGCTGCTGCTGTAGATGCCGTGTA TTCAAACGAATGTTTAACACATACGCACATACACTGCAGGCGCAATGGCT GTAAAACGTTTAACCGAACACCACAACAAACCGAGTCTTTCCTGTTAGTG AGTGAGCGTTGTTGTTAAAAATGAAGCGGCACTTTACATCTCAGCTGATG ACTCTCTCTTTGTCTCTCTCTCGCACTTTATCTTCTATTCCTTTTTATCT CGTTGGATCCCCCGGCACGCACATCATGCACACTACTGTACCACTCAGAC TCACACCAACATGCCTCACCAACGTTTTCGACAATGATCAGGTACAACGC CAACGCCCAGGTTTATCCCATTGTGCGTCCCTCAATGCGGTTGAACACTG CAGCCCAAAAAAATGTAAAAATTGGCTTTTCTACACGTGGTGGCGAGCAT GAAACGTGTGTGTGTTTGTTTGAGAGAGAGATAGAGAGGGAGACAGAGAG GGAGGGAGAGGGAGAGAGAAAAGAGACAGAGAGATCTGCCCCCTCCCAAC AGAGACAAACACATGGAAGCCGAGGGACTTCAATGGCTCACCTACCCAGT TGAATGATGTTCGGTGATCCGCGGTGGCAGTCCTCGACATTCGGTGCAGA AATATTATCACCGCGACCACCACCAGCAGCAGCAGCAGAAGCAGCAGCCG AGATTTCCGCGAAGGAACCTGTGGCACGTGAGTGGATCACTCCGAAGGTC ATAACCAAGAAGAAAAACAAATGCGATTTTTGCGTCAAGCGCAAGCGTCC CTGCGATGGTTTAGGGTTCAAGCATTGTAGATGAGAATCACCTACGTTCC ATGAGAGATTCAAGGTGCGTGGTGATGTCCGTGCCGCGGTTATAGCAGTT TTGGTGTTTGACATCGCCAATGAGTGCCCTCTACGAACAGGGCGTGTGCA TCATCTACCGATGACTTATTGTCCGAGCATTGGTGACGTACCAGAGGAGA TCAAATGGTGTGCTGCGGGCTTTGTTTTAGATGCCACCTACAGCCGCGTA TGCTCGAACACGATCGCCCCCTCCCCACTGAGAACGATTTCCTACTGAGT CCATCTGCCGTCGGAAGCGGTTTCTCACCGACTGACAGTACCTTTTGTTC CGTTGCCTTTCTCTCTCTCTCCGAATGCCACTGTTGTACCCTGTACCCTG AACAAACAACATTTGGAGACATTGTTGCTGATCGCTCTCCCTTATCTTCC CCCATGTGGTCCCGCGATCTTCGAACAACGTCAGCAATAACATGACGTAT GCAGATAAGACAACAGACCCACCCGAGACGGAACGTAGGGATGTGTTATT TTGTCATTTTTCTTGCCGAGAGGGTTTCGTATGTCGGCTGACGATAAACA TCTCCAAGATATACCTGGCATACGTTAGCCTCCCTGCATGACTCTGCCAG GTCAAACAGCATACGAACTCGGCGAGAACCCCTCCGATAAGCTGCGTATG ATATTGTTGTTGTTGTTGTTGTTGATTCTCACATTAGCTCACTACCGCCG CAGTCTAGCCCGTGATCACAAACCAGGCACATATCGTGCTAGGAGGAAAA AAATAATATATAATAAATGGACTATGATCACCCACAGTCAAATTAGATAG GGTACCGTTGGGGTAACATCTGTGGTGGCCAATGTACCAAACAAAATACA GAAAAAAAATAACAGGTTCGAAAGAAAAAACAAAAATTGGAATCAGTACG ACAAACAAAAAAAATCCAAGACAAACCTCAACCATAACCATATACTTCGA AGTACTTCGTACATCGAACATGTACAGTACTCCGTCTTCCAACCCTTTTC GACCAATGTTACTCGTTAGCATGATACTGTACATGTATTACTCGTTTGTT TTGGTGTAAATTACACACAAGATAAGTATTGAAATGCCATAAATGGAACT ATCATATCAAAGCTGTCGTTTATCGCACCACGTTTTTTGGAATTTGAAAA AAGGCTTCGTGGGGAGGTCTCTTGGGCAGCGTTTGTGCTTTCGCGGCCTA GCGCGATTTCAGTACACCAGCCGTATCACAAATGATACCACGTCATGATG GTGTTCCTTGGCACTACAGTAGTACCGGGGCCCGCAAGGAAGAAACTGAA TATCGGCCTGAGGCTGGGTCTCTTGTTTTGTGACCACCATGAGAGCACAC CGTTTCGTAGCTACCATAAAGAATTTAGTGTGGGGCCGGCCGCTGAGCCA ATATTCTTACGCCGAATTTCTAAAATTTTCAAAAATCTCAGCCTCATTTT CGTACTCATGCGTTTCTCACTTGCGGGCCGGTACTGTTCGGTGTTGCTGC CGTCGTCGCCGAGAGCCGAAAAAAAATCGCGGGCGTGTCGTCCGAACCAC CGAATGACATGGGCCTCAATCTCGCTACACCTGCTATTGTAGGAGATTAC CGCAGTAGGTACGTTAGCTCGATAGGACCCTCGGCGAGAGCAGCAGTAGC AGCAGCAGCGGCGGCAGCGGCGGCAGAAGCAGCATTAGCAGCAAACAAAC AACAGAAGTGCGTCTTATCGGGATAGCACACAAATATCAGGCCATTTTTG GTGGGTTCTTCTGCTGTAGGTCTGTAACTCTGTGTGACATCGTCATTCAC CGTTTTATTACTGCTCTAGTTGATCGGACTGCGGAAGCCTTCTGCCCATC AGTCCCACCCCTCTCGCTTGAGCGATAGGAGACTGGACCACCGACCGAGC CCCAAACGAAATTTCGCTACTCTTTCTCTCTTTCTCTCTCTCTTTCGGTG GATCCCTCGGCAAAGTCCTCTCGCTGCCCGATCTCTGCACTGTCTGCACG CATGAAGGAACATAATCACGCAGAATTTATTTTTGTCCGACCAATGCAAA GGGGCTTGCTTCTGCAACACACCAAAAAGGAACCAAACTCAGACCACGTA CCTACCGTTAGGTGTGTTTGATTTCCAGACTGACCGGTCAAGAGCGCATA CGCACTTGCAACAAGTAGCAGGCGGGTCTCATTCTAACTACCCTACAGAG CCGATGTAGCGGTGAGAGCAGTGCTGGTTACCCATATGAAGCGGTCCTCA GTAAGCAACGGAAACTCCCATTTCGTAGGGAGAGCACTTTAGGTGGAACG AAGTGATGCCAATTGACGAGCCCTTCGTTCAACCCTCAAAATATGAGTTA TCTGAACGTTATGTTTGCCGGCAGCCATCACAGGTTTTGAACCTCATTCC AAGAGAGTGATTGTGTGTTCGATATCCTGACTCTGCACCTGGTACTTAGT ACATCCTTCCTTGCGGCGCCGCACTTCAGGTCAACGAAACACACTGTGTT GATTGATTTTGTATTCAGCGGCAGGGCTCTAGGTTCTATTTCAATTTGCA TTTCTTGCGTAGGGTATGCCCGCGTGCGTTGCTCCTCCACAAACCGTTTA GAATGAAGAATAGCTTGCCGCGTACGCTCGGCTGCGCCTATTTGTGTGGA TAGCACAAACAAACAAATAAGCAAATAAGTGCCGCTGTACATAAGTACCC TGCCGCCAAGTCGTTAATATTATTCAATAAAAAACACAATGAGTGGGATC TCCAACGCAAAACGTGCATAGAACCTCCTTCTTGAGTCTGGCACATACCG CTATCATAAAAAGTGCTTACGCCAGCCGTACAAGGGGCATGTAAACTAGC TCACTTTTTGCTGAGTGTCTCATCATGAAGTGGTCGTGCTTGGGCTCTTC GGACGCCCGGTTCTAACTGTTTTTATTGCTTGCGCCTCCCGCACGCATTT GATACAGCTTTTGCATCGCCAAGAACCGGCCGGAATGTCGCTATAGCCAT CGACTACCAACGCCTTCCAGGGTCGCCACCACCAAGACTTTTACTCGGTC GACTGATATGGGTGAGAACGTCGCCCACGCTTCGCAACTGCCACCACCCC AGCTCTCCGACCAACGTTCCTGGCATGCGGACGGTGCCAACGCCATACAG GGGGAGCGACATCATACCGCGACTGGCCCTCTGCCTCTCCCGCTCAAGAG GTGCGGAGGAAACCGTGGTGCTTTCCGAGGCGGCTGGTATGCACCGGTGA CTCCCGAGGTCTGGCGGCAGAGAAAGCGAAGCTTTCAGTAATTTTACACT CTCACACGTCCAACACTATTCTATCATAGCCCCCCCCACCCCGAGAAATA CGGATTCCGACCCAAATCCCACCCTTTCCGCCCCATGAAAAAGCCGTCGT ATTCTACCGTCGCGAAAGCTTGATGATTGGCTCGTGGTTTCCGTCGGTAG GCAGTTGAAACAGCCTTGGGCGCACGAGATGTAAACCTCGACGGGTGGTT TCCCCGTTGTATAGGAAAGTCTCGCATCCAAATCGGAGCTTGCCCATGTC TTCGGGTTCATGGCACGAAACGGTGCCTCCAACTGCGCTGTGCGCTCGAT CGTCCCCTCGCCCGCTCAGGGGACAGTTTTCGGCTTCTCCAGCCACCGGC CTCATAGGCCTGCAGGAGAACGGTTTCTTGAGCGACTTTTTCGATTGCCT GGGCTTCCTGTCACTCGCCAGCGAAAGGTTTGTGCTGCGAGCCCGAACGG TAGCAAAGAACGTGTGATAGAGCTCGCCGGTACGCATCGAGCTTGTCGCG AGGCCTCGGTTGGGAACCGGCTTGTTATTGCACTGAACCGTGGCGGCGTT TGAAGTTTCAGAGGTAGCTTGTTTGTTATCGTGTTACGTGCGTCATGCAG AAGTTCGTAATTCCTAGTTTTGGCTCTTGGTCTCTCTAGAGTTGTGAGCA GTCTAGTGAAGCGAAGAGGGCATGTTTTCAATATTGAGAAATTATTGTTC CCCGTAACGTCGGCAGTCATCGAGCCGTCAACGAGGCACATTCGAGGGAT TGCAAACGTACAAGCAGCACGTGGCCTAATTTTTGAGGCCTGGCGAAAAG CCAGATGAAGTACAGGCTCCTGAAACGATTCAACCGTAAAACTCTCAACT TCTGGTGCTCCTTGTCCCGCCGATGTTCTATTTCAGGGCTCTCATTGCAC ATGTGTGGTGTCGTGTTGATGGCCAACTGCGTGCTCTCTGTGTCGTTCGC ACTGTTATTACCGAAGAGCGACATTTGCCCACAGCGTCGCCCCCTCACAT TTGGCTCTAACACACACAAGGTGTCCAGTGGTGTCCGCACTGCAATATTC AGCGTCATGCATGCTGCAGAACCGGAGGAGTTCGGAGCAACAACGTCACC GCCTCTTCACGTTGCTGAAGGGGCAATACAATGCCTGGTCGACGGTGGCA ACCTGTCTGGTGGGCACTGGGACCAGGCTGTGCCAGCTGGGGGTGGACCA TTACTCCACGATTCGTCGACGTGCCTTCTGTGGTGCGCCGTTGGGCTTGG GGCGCTGGTACGGGGATGTCCCTTGACACATGTGGGTAGATTCCTTGCTG GATCCACGGGGACGGTTCGTCAGGGGAAGGCGTGGGCCTGATGTAGTGCT TTCCTCGTCCTCTTGATAGAAACCCTATCCCGTGCCGTGTTTATCAACCG GAGCAGTACGCCAAAATACGGGTTTAATATGTTCTCTTTCTCAGAGAAGG AGAAACCGATGCAACAAAGATGATGTCGAGTTCGACATCGTTCGCACAGC AAGAACGCCCGCAGGCTCCGATCTGCCGACATTACTTCTAGCTTCACATT CGAAGCGTGTAACGCGTTCGGCTGGCCTGGTTCTCAAGACTCTTTGTGCT CGGTGAAACGACAGTGACAATACTACCATCCCCATAGCGCGATGTGCCTC CGCCGTCCTCTCTTGCCGATGGCCACCGTAAGTGCAACAAACATGAAGGC TTACATGGCTTAGACGCTGACAGAGAATGTCCTTGTTGATGAATCGTTCC CCGCCGCCTCTCCTGTCCTCGTGTGGCTAATTCTCTGCGTTTGCATGCTT CAAAACAACGTGTTGTTTGAGGATTTTTCCTGTACGACTGCGCCTGGAGA AGCGACAATACTTAGCTGAGTGAATTCCGCAACCATTTGCGTTTCTTCAT TCTGTGCAGCGTCCCGCATGGGCCTTCTGGGCATCTGATAAGTTCGATGA CGCAAGCAGCACCGCCTTGGCAGTTCAAAGCAGAAAGTACAAGACCCTTG CACCAACTCAGTATACGCTGTTGACAACCTCAGGTATCGTAGTGTAGTGC GCGTCCTTATTCTCGTGCCTTGCTCCAATGACCATGGTCTATCAGGTGGA GGGGTACGTCGACCTGGCGCAGGTTTCGTTGACCCACTGTTTCGACGGCA TCACGCTTGACTCAGCAAGGTGGGAGAGAAGGTGTCGGCGTCGCACTACA CAGTTGATAGCTCCTTCACGAAAACACTGCTGTAGCTCAAACCGAGTGAC CACTCGGTGTTGTACCGCAGAGAATGTCTGAGTTGTTCGGCACAGTTTCC GGGTCAATGATTGAACTTATGGTGTGTAGAAGAAGTTGTGGCTCGGCATC CAAATTTCGAAGCTGCTGAGCTACGTTTGTTTTTTAATCACACGGCCCGA TTCCGGATACTATACTGCAGGGCCTACCTCGCTATGGCCGTCTTGCACGA CTTCCTAGGCAACCAGGCAAGTAGCCATGTTGCGAATATTCGTGCACGTG ACAGAACCCCGGTTCTTTCAACGTAACCCGTTATCTTTCTTGACGCTCAA GTAGATGACGCGGACCACACGATTCTGTGGCTGTTGCTCTTGTGACAGGC GGAATTTATCTCCGGGAGCGATACTCCAGAGCCTTTGTCATGATCGATCA ACCAACGTCGTCATCTTGTGCTACAGAAAAAGGCATCACGCGCCTTCCCG ACCGCACACACATGACGCGGATGCTGTGAACCTATTTTCACCCATGTCTC GCACGTTACTCCCGTTCCTTCAGACCCCTCTAGACCTTATATGTAACCCA CTATTCATCCGAGTAGCTTAAACATTCACACGATTACTATCACAGACTAA ATCGTGATTTCGTGGTGACAGGGGGCGTATAAATCACGTGAAGGATCGAT TTTACAGGGCAAATAACGCCTCGCTCATGACACGCACTTTCTAATCCCCA GACGAAGAGTCACGGCTATCTGGAGTCCGCGACGAGCATCGTTCGTGTAT TACCGCCAGAACGACTTCCCACG
back to top

Coding sequence (CDS) from alignment at P-littoralis_Contig811:54334..75156+

>mRNA_P-littoralis_Contig811.26.1 ID=mRNA_P-littoralis_Contig811.26.1|Name=mRNA_P-littoralis_Contig811.26.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1023bp|location=Sequence derived from alignment at P-littoralis_Contig811:54334..75156+ (Pylaiella littoralis U1_48)
ATGATGTTCGGTGATCCGCGGTGGCAGTCCTCGACATTCGGTGCAGAAAT
ATTATCACCGCGACCACCACCAGCAGCAGCAGCAGAAGCAGCAGCCGAGA
TTTCCGCGAAGGAACCTGTGGCACGTGAGTGGATCACTCCGAAGGTCATA
ACCAAGAAGAAAAACAAATGCGATTTTTGCGTCAAGCGCAAGCGTCCCTG
CGATGGTTTAGGGTTCAAGCATTGTAGCTTTTGCATCGCCAAGAACCGGC
CGGAATGTCGCTATAGCCATCGACTACCAACGCCTTCCAGGGTCGCCACC
ACCAAGACTTTTACTCGGTCGACTGATATGGGTGAGAACGTCGCCCACGC
TTCGCAACTGCCACCACCCCAGCTCTCCGACCAACGTTCCTGGCATGCGG
ACGGTGCCAACGCCATACAGGGGGAGCGACATCATACCGCGACTGGCCCT
CTGCCTCTCCCGCTCAAGAGGGGACAGTTTTCGGCTTCTCCAGCCACCGG
CCTCATAGGCCTGCAGGAGAACGGTTTCTTGAGCGACTTTTTCGATTGCC
TGGGCTTCCTGTCACTCGCCAGCGAAAGTGGTGTCCGCACTGCAATATTC
AGCGTCATGCATGCTGCAGAACCGGAGGAGTTCGGAGCAACAACGTCACC
GCCTCTTCACGTTGCTGAAGGGGCAATACAATGCCTGGTCGACGGTGGCA
ACCTGTCTGGTGGGCACTGGGACCAGGCTGTGCCAGCTGGGGGTGGACCA
TTACTCCACGATTCGTCGACGTGCCTTCTGTGGTGCGCCGTTGGGCTTGG
GGCGCTGGTACGGGGATGTCCCTTGACACATGTGGAGGGGTACGTCGACC
TGGCGCAGGTTTCGTTGACCCACTGTTTCGACGGCATCACGCTTGACTCA
GCAAGGGCCTACCTCGCTATGGCCGTCTTGCACGACTTCCTAGGCAACCA
GACGAAGAGTCACGGCTATCTGGAGTCCGCGACGAGCATCGTTCGTGTAT
TACCGCCAGAACGACTTCCCACG
back to top