mRNA_P-littoralis_Contig81.173.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig81.173.1
Unique NamemRNA_P-littoralis_Contig81.173.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig81.173.1 vs. uniprot
Match: D7FJC6_ECTSI (LL-diaminopimelate aminotransferase diaminopimelate aminotransferase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FJC6_ECTSI)

HSP 1 Score: 800 bits (2066), Expect = 1.790e-290
Identity = 398/435 (91.49%), Postives = 418/435 (96.09%), Query Frame = 3
Query:   78 AQTARSTTGA---RTSTRMVATPDKVGSGVKRNENFAKLKAGYLFPGIAKRRNAYLEANPDCRPIISLGIGDTTQPIPPHILSGLVGGAEALGTQDGYTGYGAEQGKADIREKISQKLYNGLINPDEVFVSDGAKCDIGRLQMMFGPGVVSAVQDPSYPVYVDTSVMMGQTGEINEDTMQYDNIVYMPCKPSNDFFPDLESLPHADVIYFCSPNNPTGAVATREQLEALVAYANKKGSIVVFDAAYAPFIRTPGVPKSIFEIEGSRSCCIEVNSFSKYAGFTGARLGWTVIPDEVKYADGSPVRNDFNRVMTTAFNGASNIVQASSGGLTCLDDEGMEEISNLMDYYLENARILKEGIESCGFKSHGGTDAPYVYVDLEGKPSWDVFSEILEKAQVVTIPGAGFGPGGEGFLRLSAFAPRESCVEAVERLRAVLA 1373
            A T+RS TG+   R STRMVATPDKVG+GVKRNENFAKLKAGYLFPGIAKRRNAYLEANPDCRPIISLGIGDTTQPIPPHILSGLVGGA+ LGT++GYTGYGAEQGKADIREKIS+KLYNGLI PDEVFVSDGAKCDIGRLQMMFG GVVSAVQDPSYPVYVDTSVM+GQTGE+NE+TMQYDNIVYMPCKPSNDFFPDL++LPHADVIYFCSPNNPTGAVATREQLEALVA+AN KGSIVVFDAAYAPFIRTPGVPKSIFEIEGSR+CCIEVNSFSKYAGFTGARLGWTVIP+EVK++DG+PVRNDFNRVMTTAFNGASNIVQ  SGG+TCLDDEGM EI  LMDYYLENA+ILKEGIESCGFKSHGG DAPYVYVDLEGK SWDVFSEILEKAQVVTIPGAGFGPGGEGFLRLSAFAPRESCVEAVERLRAVLA
Sbjct:   36 APTSRSVTGSSRPRASTRMVATPDKVGTGVKRNENFAKLKAGYLFPGIAKRRNAYLEANPDCRPIISLGIGDTTQPIPPHILSGLVGGAKTLGTKEGYTGYGAEQGKADIREKISEKLYNGLIKPDEVFVSDGAKCDIGRLQMMFGSGVVSAVQDPSYPVYVDTSVMVGQTGEVNEETMQYDNIVYMPCKPSNDFFPDLKALPHADVIYFCSPNNPTGAVATREQLEALVAHANAKGSIVVFDAAYAPFIRTPGVPKSIFEIEGSRTCCIEVNSFSKYAGFTGARLGWTVIPNEVKFSDGTPVRNDFNRVMTTAFNGASNIVQ--SGGMTCLDDEGMAEIDTLMDYYLENAKILKEGIESCGFKSHGGKDAPYVYVDLEGKASWDVFSEILEKAQVVTIPGAGFGPGGEGFLRLSAFAPRESCVEAVERLRAVLA 468          
BLAST of mRNA_P-littoralis_Contig81.173.1 vs. uniprot
Match: A0A835YZU2_9STRA (LL-diaminopimelate aminotransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZU2_9STRA)

HSP 1 Score: 677 bits (1746), Expect = 5.780e-242
Identity = 334/413 (80.87%), Postives = 362/413 (87.65%), Query Frame = 3
Query:  123 MVATPDKVGSGVKRNENFAKLKAGYLFPGIAKRRNAYLEANPDCRPIISLGIGDTTQPIPPHILSGLVGGAEALGTQDGYTGYGAEQGKADIREKISQKLYNGLINPDEVFVSDGAKCDIGRLQMMFGPGVVSAVQDPSYPVYVDTSVMMGQTGEINEDTMQYDNIVYMPCKPSNDFFPDLESLPHADVIYFCSPNNPTGAVATREQLEALVAYANKKGSIVVFDAAYAPFIRTPGVPKSIFEIEGSRSCCIEVNSFSKYAGFTGARLGWTVIPDEVKYADGSPVRNDFNRVMTTAFNGASNIVQASSGGLTCLDDEGMEEISNLMDYYLENARILKEGIESCGFKSHGGTDAPYVYVDLEGKPSWDVFSEILEKAQVVTIPGAGFGPGGEGFLRLSAFAPRESCVEAVERLR 1361
            MVA    V + VKRN NF KL AGYLFP I +RRNAYL ANPD RPIISLGIGDTT PIP HILSGL  GA  LG ++ Y+GYGAEQG+  +REKI+ KLYNGLI PDEVFVSDGAKCDI RLQMMFG GVVSAVQDPSYPVYVDTSVMMGQTG ++  T Q+DNIVYMPC P+NDFFPDL  LP ADVIYFCSPNNPTGAVATR QLEALVA+A K+GSIVVFDAAYAPFIRTPGVPKSIFEIEG+RSCCIEVNSFSKYAGFTG RLGWTVIPD+VKYADG+PVR DFNRVMTTAFNGASNIVQA  GGL CLDD G+ EI+NLMDYYL+NA ILK+GIESCGFK++GG D+PYV+VDLEGK SWD+FS ILE AQVVTIPGAGFGPGGEGFLRLSAFAP+ESC EAV RL+
Sbjct:   40 MVAAEPAVTTAVKRNANFGKLSAGYLFPEIGRRRNAYLAANPDTRPIISLGIGDTTLPIPEHILSGLQKGASQLGNKETYSGYGAEQGQGALREKIANKLYNGLIKPDEVFVSDGAKCDIARLQMMFGAGVVSAVQDPSYPVYVDTSVMMGQTGLVDPATSQFDNIVYMPCNPTNDFFPDLSKLPRADVIYFCSPNNPTGAVATRAQLEALVAHAKKQGSIVVFDAAYAPFIRTPGVPKSIFEIEGARSCCIEVNSFSKYAGFTGVRLGWTVIPDDVKYADGTPVRQDFNRVMTTAFNGASNIVQA--GGLACLDDAGLAEINNLMDYYLDNAVILKKGIESCGFKAYGGLDSPYVFVDLEGKSSWDMFSNILENAQVVTIPGAGFGPGGEGFLRLSAFAPKESCKEAVSRLQ 450          
BLAST of mRNA_P-littoralis_Contig81.173.1 vs. uniprot
Match: A0A7S0A1P4_9STRA (Hypothetical protein n=1 Tax=Rhizosolenia setigera TaxID=3005 RepID=A0A7S0A1P4_9STRA)

HSP 1 Score: 615 bits (1587), Expect = 5.510e-218
Identity = 299/405 (73.83%), Postives = 347/405 (85.68%), Query Frame = 3
Query:  150 SGVKRNENFAKLKAGYLFPGIAKRRNAYLEANPDCRP-IISLGIGDTTQPIPPHILSGLVGGAEALGTQDGYTGYGAEQGKADIREKISQKLYNGLINPDEVFVSDGAKCDIGRLQMMFGPGVVSAVQDPSYPVYVDTSVMMGQTGEINEDTMQYDNIVYMPCKPSNDFFPDLESLPHADVIYFCSPNNPTGAVATREQLEALVAYANKKGSIVVFDAAYAPFIRTPGVPKSIFEIEGSRSCCIEVNSFSKYAGFTGARLGWTVIPDEVKYADGSPVRNDFNRVMTTAFNGASNIVQASSGGLTCLDDEGMEEISNLMDYYLENARILKEGIESCGFKSHGGTDAPYVYVDLEGKPSWDVFSEILEKAQVVTIPGAGFGPGGEGFLRLSAFAPRESCVEAVERLR 1361
            SGV+RNENFAKL  GYLFP I +RRNAY+EANPD    IISLGIGDTT PIP HIL+GLV GA  LG ++ Y+GYGAEQG   +REKI++KLYNGL++ DEVFVSDGAKCDI R+Q MFG  V SAVQDPSYPVYVDTSVM+GQTGE + +TMQY+NIVYMPC   N FFPDLESLP+ADV+Y CSPNNPTGA ATREQLE +V    ++GSI+VFDAAYAPFIRTPGVPKS++E+EG++   IEVNSFSKYAGFTG RLGWTVIP ++K+ DG+PVR DFNRVMTTAFNGASNIVQA  GG+ CLDDEG++EI NL+DYYLENA +L+E +ES G+  +GGTDAPYV+V L+GK SWD FSEILEKAQVVTIPGAGFGPGGEG+LRLSAFAPR+S +EA +RL+
Sbjct:   36 SGVERNENFAKLAGGYLFPEIGRRRNAYIEANPDMADRIISLGIGDTTMPIPEHILTGLVEGASKLGVKETYSGYGAEQGMGPLREKIAEKLYNGLVSADEVFVSDGAKCDIMRIQQMFGSKVKSAVQDPSYPVYVDTSVMLGQTGEQDPETMQYENIVYMPCTAENGFFPDLESLPYADVVYICSPNNPTGAAATREQLENVVKICKERGSILVFDAAYAPFIRTPGVPKSVYEVEGAKEVAIEVNSFSKYAGFTGVRLGWTVIPSDLKFKDGTPVRQDFNRVMTTAFNGASNIVQA--GGMACLDDEGLKEIDNLIDYYLENAAMLRETMESIGYTVYGGTDAPYVFVALKGKSSWDTFSEILEKAQVVTIPGAGFGPGGEGYLRLSAFAPRDSIIEACKRLK 438          
BLAST of mRNA_P-littoralis_Contig81.173.1 vs. uniprot
Match: B8BT02_THAPS (Aspartate aminotransferase n=2 Tax=Thalassiosirales TaxID=33847 RepID=B8BT02_THAPS)

HSP 1 Score: 613 bits (1581), Expect = 1.350e-217
Identity = 303/409 (74.08%), Postives = 341/409 (83.37%), Query Frame = 3
Query:  150 SGVKRNENFAKLKAGYLFPGIAKRRNAYLEANPDCRP-IISLGIGDTTQPIPPHILSGLVGGAEALGTQDGYTGYGAEQGKADIREKISQKLYNGLINPDEVFVSDGAKCDIGRLQMMFGPGVVSAVQDPSYPVYVDTSVMMGQTGEINEDTMQYDNIVYMPCKPSNDFFPDLESLPHADVIYFCSPNNPTGAVATREQLEALVAYANKKGSIVVFDAAYAPFIRTPGVPKSIFEIEGSRSCCIEVNSFSKYAGFTGARLGWTVIPDEVKYADGSPVRNDFNRVMTTAFNGASNIVQASSGGLTCLDDEGMEEISNLMDYYLENARILKEGIESCGFKSHGGTDAPYVYVDL-EGKPSWDVFSEILEKAQVVTIPGAGFGPGGEGFLRLSAFAPRESCVEAVERLRAVL 1370
            S V RN NFAKL  GYLFP I +RRNAYL  NP+    IISLGIGDTTQPIP HILSGLV  A  LGT++GY+GYGAEQG  D+R KI+ KLYNG+I   EVFVSDGAKCDI R+Q +FGPGVV+AVQDPSYPVYVDTSVMMGQTG+IN  T QYDNIVYMPC   NDFFPD+ES P AD++YFCSPNNPTGA AT+EQLE LV    ++GSI+VFDAAYAPFIR+ GVPKSIFEIEG+R   IE NSFSKYAGFTG RLGWTV+PDE+ +ADGS VR+DFNRVMTTAFNGASNIVQ   GGL CLDDEG+ EI  L+DYYLENA++LKE +ES G+K +GGTDAPYV+V L EGK SWD FSEILEKAQVVTIPGAGFGPGGEG+LRLSAFAPR++ +EA  RL+  L
Sbjct:    2 SKVVRNPNFAKLVGGYLFPEIGRRRNAYLAENPEMASRIISLGIGDTTQPIPDHILSGLVNSASKLGTKEGYSGYGAEQGMGDLRAKIADKLYNGIIKDSEVFVSDGAKCDIMRVQQVFGPGVVTAVQDPSYPVYVDTSVMMGQTGDINSSTNQYDNIVYMPCNAENDFFPDIESTPRADIVYFCSPNNPTGAAATKEQLEKLVKVCKERGSILVFDAAYAPFIRSEGVPKSIFEIEGAREVAIECNSFSKYAGFTGVRLGWTVVPDELTFADGSKVRDDFNRVMTTAFNGASNIVQG--GGLACLDDEGLAEIDTLIDYYLENAKLLKEAMESIGYKVYGGTDAPYVFVKLPEGKSSWDTFSEILEKAQVVTIPGAGFGPGGEGYLRLSAFAPRDTVIEACSRLKETL 408          
BLAST of mRNA_P-littoralis_Contig81.173.1 vs. uniprot
Match: A0A6U6DPL0_9STRA (Hypothetical protein n=2 Tax=Odontellaceae TaxID=2749909 RepID=A0A6U6DPL0_9STRA)

HSP 1 Score: 614 bits (1584), Expect = 1.820e-217
Identity = 299/406 (73.65%), Postives = 342/406 (84.24%), Query Frame = 3
Query:  150 SGVKRNENFAKLKAGYLFPGIAKRRNAYLEANPDCRP-IISLGIGDTTQPIPPHILSGLVGGAEALGTQDGYTGYGAEQGKADIREKISQKLYNGLINPDEVFVSDGAKCDIGRLQMMFGPGVVSAVQDPSYPVYVDTSVMMGQTGEINEDTMQYDNIVYMPCKPSNDFFPDLESLPHADVIYFCSPNNPTGAVATREQLEALVAYANKKGSIVVFDAAYAPFIRTPGVPKSIFEIEGSRSCCIEVNSFSKYAGFTGARLGWTVIPDEVKYADGSPVRNDFNRVMTTAFNGASNIVQASSGGLTCLDDEGMEEISNLMDYYLENARILKEGIESCGFKSHGGTDAPYVYVDL-EGKPSWDVFSEILEKAQVVTIPGAGFGPGGEGFLRLSAFAPRESCVEAVERLR 1361
            +GV RN NFAKL  GYLFP I +RR AYLE NPD    IISLGIGDTT PIP HIL GLV GA  LG ++ Y+GYGAEQG+ D+REKI+  LY G+I PDEVFVSDGAKCDI RLQ MFGPGV SAVQDPSYPVYVDTSVMMGQTG+I+E T QYDNIVYMPC   N+FFPD  SLP ADV+YFCSPNNPTGA AT+EQLE LV    ++GSI+VFDAAYAPFIR+ GVPKSIFE+EG+R C IEVNSFSKYAGFTG RLGWTVIP ++K+ADG+PV+ DFNRVMTTAFNGASNIVQ  +GG+ CLDD+GM+EI  L+DYYLENA +LKE +ES G+K  GGTDAPYV++ L EG+ SWD FS+IL+KAQVVTIPGAGFGPGGEG+LRLSAFAPR+S +EA +RL+
Sbjct:   39 AGVPRNPNFAKLAGGYLFPEIGRRRTAYLEENPDMADRIISLGIGDTTMPIPEHILKGLVDGASKLGKKESYSGYGAEQGRGDLREKIASTLYGGIIEPDEVFVSDGAKCDIMRLQQMFGPGVTSAVQDPSYPVYVDTSVMMGQTGDIDESTSQYDNIVYMPCTAENEFFPDYASLPRADVVYFCSPNNPTGAAATKEQLEGLVKTCKERGSILVFDAAYAPFIRSEGVPKSIFEVEGARDCAIEVNSFSKYAGFTGVRLGWTVIPSDLKFADGTPVKQDFNRVMTTAFNGASNIVQ--NGGMACLDDDGMKEIDALIDYYLENAALLKEAMESIGYKVFGGTDAPYVFIQLPEGQSSWDAFSDILDKAQVVTIPGAGFGPGGEGYLRLSAFAPRDSVIEACKRLK 442          
BLAST of mRNA_P-littoralis_Contig81.173.1 vs. uniprot
Match: K0SB67_THAOC (Aminotran_1_2 domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SB67_THAOC)

HSP 1 Score: 608 bits (1568), Expect = 3.560e-215
Identity = 298/410 (72.68%), Postives = 343/410 (83.66%), Query Frame = 3
Query:  150 SGVKRNENFAKLKAGYLFPGIAKRRNAYLEANPDCRP-IISLGIGDTTQPIPPHILSGLVGGAEALGTQDGYTGYGAEQGKADIREKISQKLYNGLINPDEVFVSDGAKCDIGRLQMMFGPGVVSAVQDPSYPVYVDTSVMMGQTGEINEDTMQYDNIVYMPCKPSNDFFPDLESLPHADVIYFCSPNNPTGAVATREQLEALVAYANKKGSIVVFDAAYAPFIRTPGVPKSIFEIEGSRSCCIEVNSFSKYAGFTGARLGWTVIPDEVKYADGSPVRNDFNRVMTTAFNGASNIVQASSGGLTCLDDEGMEEISNLMDYYLENARILKEGIESCGFKSHGGTDAPYVYVDL-EGKPSWDVFSEILEKAQVVTIPGAGFGPGGEGFLRLSAFAPRESCVEAVERLRAVLA 1373
            SGV RN NFAKL  GYLFP I +RR AYL  NPD    IISLGIGDTTQPIP HILSGLVG A  LGT++GY+GYGAEQG  D+R KI++KLY+G I  DEVFVSDGAKCDI R+Q +FGPGV +AVQDPSYPVYVDTSVMMGQTG+IN +T QYDNIVYMPC   N+FFPD+E+LP AD++YFCSPNNPTGA ATREQLE LV    ++GSI+VFDAAYAPFIR+ GVPKSIFEI+G+R   IE NSFSKYAGFTG RLGWTV+PDE+ ++DG+ VR+DFNRVMTTAFNGASNIVQ   GGL CLDDEG+ EI+ L+DYYLENA++LKE +ES G+   GG DAPYV+V L +GK SWD FSEILEK QVVTIPGAGFGPGGEG+LRLSAFAPR++ +EA ERL+  +A
Sbjct:   30 SGVTRNPNFAKLAGGYLFPEIGRRRTAYLAENPDMADRIISLGIGDTTQPIPEHILSGLVGSASKLGTKEGYSGYGAEQGMGDLRAKIAEKLYDGNIKADEVFVSDGAKCDIMRVQQVFGPGVTTAVQDPSYPVYVDTSVMMGQTGDINSETSQYDNIVYMPCTAENNFFPDIENLPRADIVYFCSPNNPTGAAATREQLEMLVKVCKERGSILVFDAAYAPFIRSEGVPKSIFEIDGAREVAIECNSFSKYAGFTGVRLGWTVVPDELTFSDGTKVRDDFNRVMTTAFNGASNIVQG--GGLACLDDEGLTEINTLIDYYLENAKLLKEAMESIGYDVFGGADAPYVFVKLPDGKKSWDTFSEILEKTQVVTIPGAGFGPGGEGYLRLSAFAPRDTVIEACERLKKAMA 437          
BLAST of mRNA_P-littoralis_Contig81.173.1 vs. uniprot
Match: A0A7S2Y9Q2_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2Y9Q2_9STRA)

HSP 1 Score: 608 bits (1569), Expect = 3.870e-215
Identity = 299/410 (72.93%), Postives = 341/410 (83.17%), Query Frame = 3
Query:  150 SGVKRNENFAKLKAGYLFPGIAKRRNAYLEANPDCRP-IISLGIGDTTQPIPPHILSGLVGGAEALGTQDGYTGYGAEQGKADIREKISQKLYNGLINPDEVFVSDGAKCDIGRLQMMFGPGVVSAVQDPSYPVYVDTSVMMGQTGEINEDTMQYDNIVYMPCKPSNDFFPDLESLPHADVIYFCSPNNPTGAVATREQLEALVAYANKKGSIVVFDAAYAPFIRTPGVPKSIFEIEGSRSCCIEVNSFSKYAGFTGARLGWTVIPDEVKYADGSPVRNDFNRVMTTAFNGASNIVQASSGGLTCLDDEGMEEISNLMDYYLENARILKEGIESCGFKSHGGTDAPYVYVDLEGKP--SWDVFSEILEKAQVVTIPGAGFGPGGEGFLRLSAFAPRESCVEAVERLRAVL 1370
            +GV+RN NFAKL  GYLFP I +RRN YLE +P+    +ISLGIGDTTQPIPPHIL GLV GA  LGT+DGY+GYGAEQG+  +REKI++KLYNGL++PDEVFVSDGAKCDI RLQ MFG GVVSAVQDPSYPVYVDTSVMMGQTG  NE+T QY+NIVYMPC P N FFPD  SLP ADV+Y CSPNNPTGA AT++QL  LVA   ++GSI+VFDAAYAPFIR+PGVPKSIFEIEG+R   IEVNSFSKYAGFTG RLGWTV+P  + ++DG+PVRNDFNRVMTTAFNGASNIVQ  SGG+ CLDDEG+ EI++L+DYYLENA IL+E +ES G+  HGGTDAPY++V+L      SWD F  ILEK QVVTIPGAGFGPGGEGFLRLSAFAPR+S  EA  R +  L
Sbjct:   35 AGVERNPNFAKLAGGYLFPEIGRRRNGYLEEHPEMADRVISLGIGDTTQPIPPHILQGLVDGASKLGTKDGYSGYGAEQGQGSLREKIAEKLYNGLVSPDEVFVSDGAKCDIMRLQQMFGTGVVSAVQDPSYPVYVDTSVMMGQTGTQNEETSQYENIVYMPCTPENGFFPDYASLPRADVVYLCSPNNPTGAAATKDQLTDLVALCKERGSILVFDAAYAPFIRSPGVPKSIFEIEGARDVAIEVNSFSKYAGFTGVRLGWTVVPSSLTFSDGTPVRNDFNRVMTTAFNGASNIVQ--SGGMACLDDEGLAEINSLIDYYLENAGILRETMESLGYTVHGGTDAPYIFVELPESMGGSWDAFQTILEKTQVVTIPGAGFGPGGEGFLRLSAFAPRDSINEACSRFKECL 442          
BLAST of mRNA_P-littoralis_Contig81.173.1 vs. uniprot
Match: A0A8J5XM91_DIALT (Aminotran_1_2 domain-containing protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XM91_DIALT)

HSP 1 Score: 607 bits (1565), Expect = 1.360e-214
Identity = 295/407 (72.48%), Postives = 342/407 (84.03%), Query Frame = 3
Query:  153 GVKRNENFAKLKAGYLFPGIAKRRNAYLEANPDCRPIISLGIGDTTQPIPPHILSGLVGGAEALGTQDGYTGYGAEQGKADIREKISQKLYNGLINPDEVFVSDGAKCDIGRLQMMFGPGVVSAVQDPSYPVYVDTSVMMGQTGEINEDTMQ--YDNIVYMPCKPSNDFFPDLESLPHADVIYFCSPNNPTGAVATREQLEALVAYANKKGSIVVFDAAYAPFIRTPGVPKSIFEIEGSRSCCIEVNSFSKYAGFTGARLGWTVIPDEVKYADGSPVRNDFNRVMTTAFNGASNIVQASSGGLTCLDDEGMEEISNLMDYYLENARILKEGIESCGFKSHGGTDAPYVYVDLEGKPSWDVFSEILEKAQVVTIPGAGFGPGGEGFLRLSAFAPRESCVEAVERLRAV 1367
            GVKRN N AKL+AGYLFP I +RRNAYL A+PD RPIISLGIGDTTQPIP HIL GL G A+ LGT++GY+GYGAEQG  D+R KI+ KLYNGLI P+EVFVSDG+KCDIGRLQ+MFG  VVSAVQDPSYPVYVD++VMMGQT  ++  T Q  +  IVYM C PSN+FFPDL + P ADVIYFCSPNNPTGA A+REQL  LV +A K GSI+VFDAAYAPFI++ G PKSI+EI G++   IEVNSFSKYAGFTG RLGWT++P  +K+ADG+PVRND+NRVM T FNGASNIVQ   GGL CLDDEG+EEIS L+DYYL+NA++L+E +E+ GF  HGG DAPY++VDL+GK SWD+FS ILE AQVVTIPGAGFGPGGEGFLRLSAFAPR +CVEA ERL A+
Sbjct:   38 GVKRNPNMAKLQAGYLFPEIGRRRNAYLAAHPDSRPIISLGIGDTTQPIPTHILGGLEGSAKRLGTKEGYSGYGAEQGVGDLRAKIASKLYNGLIEPEEVFVSDGSKCDIGRLQLMFGNAVVSAVQDPSYPVYVDSAVMMGQTRPVDSATPQGQHPGIVYMACNPSNNFFPDLSNTPRADVIYFCSPNNPTGATASREQLTQLVQWAKKNGSIIVFDAAYAPFIKSAGTPKSIYEIPGAKEVAIEVNSFSKYAGFTGVRLGWTIVPSALKFADGTPVRNDWNRVMCTIFNGASNIVQG--GGLACLDDEGLEEISTLIDYYLDNAKLLRETMEALGFTVHGGADAPYIFVDLKGKSSWDMFSHILETAQVVTIPGAGFGPGGEGFLRLSAFAPRAACVEACERLTAM 442          
BLAST of mRNA_P-littoralis_Contig81.173.1 vs. uniprot
Match: A0A7R9UFW6_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UFW6_9STRA)

HSP 1 Score: 605 bits (1560), Expect = 7.280e-214
Identity = 289/401 (72.07%), Postives = 339/401 (84.54%), Query Frame = 3
Query:  156 VKRNENFAKLKAGYLFPGIAKRRNAYLEANPDCRPIISLGIGDTTQPIPPHILSGLVGGAEALGTQDGYTGYGAEQGKADIREKISQKLYNGLINPDEVFVSDGAKCDIGRLQMMFGPGVVSAVQDPSYPVYVDTSVMMGQTGEINEDTMQYDNIVYMPCKPSNDFFPDLESLPHADVIYFCSPNNPTGAVATREQLEALVAYANKKGSIVVFDAAYAPFIRTPGVPKSIFEIEGSRSCCIEVNSFSKYAGFTGARLGWTVIPDEVKYADGSPVRNDFNRVMTTAFNGASNIVQASSGGLTCLDDEGMEEISNLMDYYLENARILKEGIESCGFKSHGGTDAPYVYVDLEGKPSWDVFSEILEKAQVVTIPGAGFGPGGEGFLRLSAFAPRESCVEAVERL 1358
            V RN NFAKL+AGYLFP I +RR  +LE NPD   +ISLGIGDTTQPIP HILSGLV GA  LG +D Y+GYGAEQGK D+REKI+ KLY+G+I PDEVFVSDGAKCD+ RLQ MFGP V SAVQDPSYPVYVDTSVMMGQTG I++   QY+ IVYMPC PSN FFPD+ SL  ADVIYFCSPNNPTGA AT EQL  LV Y  ++GSI+VFDAAYAPFIRTPG+PKSIFE+ G+R C IEVNSFSKYAGFTG RLGWTVIP  ++++DGS VR+DFNRVMTTAFNGASNIVQ   GG++CLDDEG+ EI  L++YYLENA++++E +E  GF   GGTDAPY++VDL+G+ SWD+FSE++EKA VVT+PGAGFGPGGEGFLRLS+FA RE+C+EA++R+
Sbjct:   37 VPRNSNFAKLQAGYLFPEIGRRRREFLEKNPDAD-LISLGIGDTTQPIPEHILSGLVSGATKLGKKDTYSGYGAEQGKGDLREKIATKLYDGIIEPDEVFVSDGAKCDVARLQFMFGPTVTSAVQDPSYPVYVDTSVMMGQTGLIDQGRGQYEGIVYMPCNPSNSFFPDISSLERADVIYFCSPNNPTGAAATMEQLTELVTYCKEQGSILVFDAAYAPFIRTPGIPKSIFEVPGARDCAIEVNSFSKYAGFTGVRLGWTVIPKNLQFSDGSLVRDDFNRVMTTAFNGASNIVQ--EGGMSCLDDEGLAEIEVLINYYLENAKLMREKLEGAGFTVFGGTDAPYIFVDLQGRSSWDMFSEVMEKANVVTVPGAGFGPGGEGFLRLSSFASRENCIEAMDRI 434          
BLAST of mRNA_P-littoralis_Contig81.173.1 vs. uniprot
Match: A0A7S1UWR5_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1UWR5_9STRA)

HSP 1 Score: 604 bits (1557), Expect = 2.780e-213
Identity = 300/410 (73.17%), Postives = 339/410 (82.68%), Query Frame = 3
Query:  150 SGVKRNENFAKLKAGYLFPGIAKRRNAYLEANPDCRP-IISLGIGDTTQPIPPHILSGLVGGAEALGTQDGYTGYGAEQGKADIREKISQKLYNGLINPDEVFVSDGAKCDIGRLQMMFGPGVVSAVQDPSYPVYVDTSVMMGQTGEINEDTMQYDNIVYMPCKPSNDFFPDLESLPHADVIYFCSPNNPTGAVATREQLEALVAYANKKGSIVVFDAAYAPFIRTPGVPKSIFEIEGSRSCCIEVNSFSKYAGFTGARLGWTVIPDEVKYADGSPVRNDFNRVMTTAFNGASNIVQASSGGLTCLDDEGMEEISNLMDYYLENARILKEGIESCGFKSHGGTDAPYVYVDLEGK--PSWDVFSEILEKAQVVTIPGAGFGPGGEGFLRLSAFAPRESCVEAVERLRAVL 1370
            SGV RN NFAKL+ GYLFP I +RR  YLE NP+    IISLGIGDTTQPIP HIL GLV GA  LG++DGY+GYGAEQG   +REKI+ KLYNGLI  DEVFVSDGAKCDI RLQ MFGPGV SAVQDPSYPVYVDTSVMMGQTGEIN DT QY+NIVYM C P N FFPD ESLP ADV+Y CSPNNPTGA AT++QLE L+    ++GSI+VFDAAYAPFIRTPGVPKS+FE EG+R   IEVNSFSKYAGFTG RLGWTVIP+++ ++DGS V+NDFNRVMTTAFNGASNIVQ  +GG+ CLDDEG+ EI  L++YYLENA++L+E +ES G++ +GGTDAPYV+V L  K   SWD FS ILE AQVVTIPGAGFGPGGEGFLRLSAFAPRE  +EA ERL+  L
Sbjct:   43 SGVTRNPNFAKLQGGYLFPEIGRRRTKYLEENPEMADKIISLGIGDTTQPIPDHILDGLVTGASKLGSKDGYSGYGAEQGMGVLREKIATKLYNGLIQADEVFVSDGAKCDIMRLQQMFGPGVTSAVQDPSYPVYVDTSVMMGQTGEINTDTSQYNNIVYMKCSPENGFFPDYESLPRADVVYLCSPNNPTGAAATKDQLEGLIKLCKERGSILVFDAAYAPFIRTPGVPKSVFECEGAREVAIEVNSFSKYAGFTGVRLGWTVIPNDLAFSDGSLVKNDFNRVMTTAFNGASNIVQ--NGGMACLDDEGLAEIDKLIEYYLENAKLLRETMESIGYEVYGGTDAPYVFVKLPEKLGGSWDAFSMILETAQVVTIPGAGFGPGGEGFLRLSAFAPREGVIEACERLKKAL 450          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig81.173.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FJC6_ECTSI1.790e-29091.49LL-diaminopimelate aminotransferase diaminopimelat... [more]
A0A835YZU2_9STRA5.780e-24280.87LL-diaminopimelate aminotransferase n=1 Tax=Tribon... [more]
A0A7S0A1P4_9STRA5.510e-21873.83Hypothetical protein n=1 Tax=Rhizosolenia setigera... [more]
B8BT02_THAPS1.350e-21774.08Aspartate aminotransferase n=2 Tax=Thalassiosirale... [more]
A0A6U6DPL0_9STRA1.820e-21773.65Hypothetical protein n=2 Tax=Odontellaceae TaxID=2... [more]
K0SB67_THAOC3.560e-21572.68Aminotran_1_2 domain-containing protein n=1 Tax=Th... [more]
A0A7S2Y9Q2_9STRA3.870e-21572.93Hypothetical protein n=1 Tax=Amphiprora paludosa T... [more]
A0A8J5XM91_DIALT1.360e-21472.48Aminotran_1_2 domain-containing protein n=1 Tax=Di... [more]
A0A7R9UFW6_9STRA7.280e-21472.07Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A7S1UWR5_9STRA2.780e-21373.17Hypothetical protein n=1 Tax=Grammatophora oceanic... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig81contigP-littoralis_Contig81:612118..623264 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FJC6
PFAMsAminotran_1_2
Model size1376
Max annot lvl2759|Eukaryota
KEGG rclassRC00006,RC01847
KEGG koko:K10206
KEGG ReactionR07613
KEGG Pathwayko00300,ko01100,ko01110,ko01130,ko01230,map00300,map01100,map01110,map01130,map01230
KEGG ModuleM00527
Hectar predicted targeting categoryother localisation
Exons11
Evalue1.62e-289
EggNOG OGsCOG0436@1|root,KOG0257@2759|Eukaryota
Ec32 ortholog descriptionLL-diaminopimelate aminotransferase diaminopimelate aminotransferase
Ec32 orthologEc-14_005830.1
EC2.6.1.83
Descriptiontransferase activity, transferring nitrogenous groups
Cds size1254
COG categoryE
BRITEko00000,ko00001,ko00002,ko01000,ko01007
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig81.173.1prot_P-littoralis_Contig81.173.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig81 612118..623142 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791664.6221745-CDS-P-littoralis_Contig81:612117..6122401680791664.6221745-CDS-P-littoralis_Contig81:612117..612240Pylaiella littoralis U1_48CDSP-littoralis_Contig81 612118..612240 -
1680791664.6410341-CDS-P-littoralis_Contig81:615437..6155541680791664.6410341-CDS-P-littoralis_Contig81:615437..615554Pylaiella littoralis U1_48CDSP-littoralis_Contig81 615438..615554 -
1680791664.6526604-CDS-P-littoralis_Contig81:616255..6163481680791664.6526604-CDS-P-littoralis_Contig81:616255..616348Pylaiella littoralis U1_48CDSP-littoralis_Contig81 616256..616348 -
1680791664.6675837-CDS-P-littoralis_Contig81:617010..6171721680791664.6675837-CDS-P-littoralis_Contig81:617010..617172Pylaiella littoralis U1_48CDSP-littoralis_Contig81 617011..617172 -
1680791664.683084-CDS-P-littoralis_Contig81:617765..6178701680791664.683084-CDS-P-littoralis_Contig81:617765..617870Pylaiella littoralis U1_48CDSP-littoralis_Contig81 617766..617870 -
1680791664.6936166-CDS-P-littoralis_Contig81:618123..6182311680791664.6936166-CDS-P-littoralis_Contig81:618123..618231Pylaiella littoralis U1_48CDSP-littoralis_Contig81 618124..618231 -
1680791664.7165546-CDS-P-littoralis_Contig81:618547..6186851680791664.7165546-CDS-P-littoralis_Contig81:618547..618685Pylaiella littoralis U1_48CDSP-littoralis_Contig81 618548..618685 -
1680791664.7290063-CDS-P-littoralis_Contig81:619508..6196491680791664.7290063-CDS-P-littoralis_Contig81:619508..619649Pylaiella littoralis U1_48CDSP-littoralis_Contig81 619509..619649 -
1680791664.7458532-CDS-P-littoralis_Contig81:620520..6206161680791664.7458532-CDS-P-littoralis_Contig81:620520..620616Pylaiella littoralis U1_48CDSP-littoralis_Contig81 620521..620616 -
1680791664.75596-CDS-P-littoralis_Contig81:621237..6213421680791664.75596-CDS-P-littoralis_Contig81:621237..621342Pylaiella littoralis U1_48CDSP-littoralis_Contig81 621238..621342 -
1680791664.7684662-CDS-P-littoralis_Contig81:623076..6231421680791664.7684662-CDS-P-littoralis_Contig81:623076..623142Pylaiella littoralis U1_48CDSP-littoralis_Contig81 623077..623142 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791664.777924-UTR-P-littoralis_Contig81:623142..6232641680791664.777924-UTR-P-littoralis_Contig81:623142..623264Pylaiella littoralis U1_48UTRP-littoralis_Contig81 623143..623264 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig81.173.1

>prot_P-littoralis_Contig81.173.1 ID=prot_P-littoralis_Contig81.173.1|Name=mRNA_P-littoralis_Contig81.173.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=418bp
MVATPDKVGSGVKRNENFAKLKAGYLFPGIAKRRNAYLEANPDCRPIISL
GIGDTTQPIPPHILSGLVGGAEALGTQDGYTGYGAEQGKADIREKISQKL
YNGLINPDEVFVSDGAKCDIGRLQMMFGPGVVSAVQDPSYPVYVDTSVMM
GQTGEINEDTMQYDNIVYMPCKPSNDFFPDLESLPHADVIYFCSPNNPTG
AVATREQLEALVAYANKKGSIVVFDAAYAPFIRTPGVPKSIFEIEGSRSC
CIEVNSFSKYAGFTGARLGWTVIPDEVKYADGSPVRNDFNRVMTTAFNGA
SNIVQASSGGLTCLDDEGMEEISNLMDYYLENARILKEGIESCGFKSHGG
TDAPYVYVDLEGKPSWDVFSEILEKAQVVTIPGAGFGPGGEGFLRLSAFA
PRESCVEAVERLRAVLA*
back to top

mRNA from alignment at P-littoralis_Contig81:612118..623264-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig81.173.1 ID=mRNA_P-littoralis_Contig81.173.1|Name=mRNA_P-littoralis_Contig81.173.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=11147bp|location=Sequence derived from alignment at P-littoralis_Contig81:612118..623264- (Pylaiella littoralis U1_48)
GTCTCGCTGCTGGCCGCACCCGGTTACGCGTTCGTCGGAACGCCGTTCGT GGCTGAGCAAGTGCGCCACGCTCCGCCGCGCAAACCGCACGCTCGACCAC CGGCGCACGTACCTCGACCCGCATGGTCGCGACACCCGACAAGGTCGGCA GCGGAGTCAAGCGCAACGAGAACTTCGCGAAGCTGAAGGTGGATGGTCGT GACAGTTGGTTTCGTTATTGTAGCGTTATTGAAGTGAGTTACGTGCGAGG TGGTGACTGCGTTGAAGATCGGCGGCGGGTTGGTGAGAGGTTCTCCTGTG GGTTGTTCATCTTTGTCATGAACTGCTGTGTGTACAGCAGTATTAGGGCA GTTCTCCTGTAAAGCGGTAGTAACAGCAGTCAGGACAGGAGCACATGTTG GGCAATGTTGCGTTGCACAAGGAAATCGGAGAGATAGCTGTCTCTGCTGT GTCTGTGCGCCATCGGCGTACGGATCGCGGCTAGTGCTGCTCACAGATCA TACTTCGAAGTACAACACCAGCAGCGTGTCATGTGTCAAGAATTTTCTTG TTCCTAACTAGTAGCCGGTCGCCCCGGTGGTTCAGTTGGTTATCCACGCA ACCTTCTAACATTCACGCGCGCGCTCGAATCCCAGTGCAGTAACACGATC TGGGGCTTTTTCTCACATTGCGCGTGAAAGTGGAAAGCGATCAATTCGTG AGTAGGCAAACCTCGATCGTACCATCGACGAGGGAAAGGGATTGCTGTCC CCTTTCTCGCGGTAAAAGCTCAACCAAAAGGCAAGCACAGCAGAGGGAAG TGGAGAAAAAAAAAAAAAAACTAACTCCTGTGTTGACTTCCCCCTGTGTG ACCCGGGTTGGAGCGTCTACCTACCCGAAAGGCGTAGACTGGCGTCCAAT GATAGGGATGACAACACACACACACGCACACACAACTGCACCAAGTAGCA GAAAGATTTGACTTCGTATCACAGTATTTAATACTCGAAGTACAACGTAC GGAGTATTTCCTACGGTCCTGAAATGGCCACCAAGCAGTTGGTGCGCCAC TTCTGCCATATCGAATCATATGACGAGGAGTACCTTGAGCAGGAAAAAAG GCATCTGTGAGGGCTACGGTTTACAGCCGGGCATGTGGTGCAAGTCATTT GCAGGCTTTCGAAAAGTGCCTAATTATTCTGGGTTTCCAAAATGTGGATC TCGAACACTTTAGCCTACGCCACATCAATAAATCGGTCAACACACGAGAA ACATCGCGGCCACTCTGTCCAACGACGCGCGGACGCTTTGTAGTCTGCTG CTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCT GCTGCTTTACTTCTGCTGTGGTGTGTGGTAGTGGTTTGGACATTAACAAG ATGGTTGGTGTCGGTCGTTGCTCTATAAAAACGGAGAACCTTGATTGGCT TGCTCCATAGAAATGGGCCAAAAAGAGAGCCCTTTGATTATCTTGCTTTC AAAGACTGCAGCTGTACCAAAAATATCCCGCCATCTACACATCTGCATTC TTACTTCGCAGCGCGTTAATTATTGGTTCAGACGAAACAGATGATTGCTG ATGTATGATATCTGTACGACTTTTGAATACGCCTCCAGAGTAATAACTGT TGCCACCTTTTGACACGTATGAACTACTACACGATACTGCAGAGTAGAGG GGGCCGAGGAGGGTAGGGCGGGGGTGCGACCTAAAAGAGGTAAAATGAAG GGCCATGTCCGGAACGGTAAAAACGGGACGAAAATTGAGATTGAGCCCTC GAAGCGCTGTCTGTTCTCTGTCTTGTTACGTTGGACACTGCTGCTGCTGC TGCTGCTTATCTTGCCGTTTCCCTGCTGTCTGTTTGCAACCGCCGCTGTC TCAACGCACACACACACACCAGGCGGGTTACCTGTTCCCGGGGATCGCCA AGCGCCGTAACGCGTACCTGGAGGCCAACCCCGACTGCCGGCCCATCATC TCGCTGGGGATTGGGGACACGACTCAGGTAAACGCATAAGTTGAATGCAG CAAAGGATAGCGAACGGTATAAACACATGTTCGACGGACATGCGAAAACG AAATTTAGGTGCAGGATTCCGTGATGGCTGGAAGCAAACTGTGGTTCGTT GGTACCGCAGTAGTGCATCCTCTTTGTTGCGTTGGCTGCAAGTGTTGTAT GTACAACGAAGTGGTGGATGTAGTGGATGAGCGCATCGAGATCTAGCAAA CAGATCGTGTGCTGGGAGATCGAACTCAGCGATGAAGGCGTCGCGTTTTT CGTGTGGTTCCGTTTTTCAAGGTTAAGTAACGTCCGAAATATCGACACTA GCAGGAGCTACAACAGTAGGGACAAACGATACCGCGTTGCGGGGCAAGTC CATGACTGCCCATGACGAGAACGGGGCCGTGCCCCTTCAGATGGGCGTAG CCTCGTGCCCCTAAAGATTGCCGTAAGCCACCCCTTATTGTAGACAGTCT CAGTGAGCGGCGATCAAGCTCAACCATCCTACACTTGCGCTCCCATGGTC TTTCTCGCTTCGTGTCGGTTACACAACACTCAACGGACGGGCGCCGGTTG TGTTGACTGCTGTGATTTGTCGTGCTCTCTTTCTCTTTCTGTCGACAGCC GATCCCGCCGCACATCTTGAGCGGCCTGGTTGGGGGGGCCGAGGCACTCG GAACCCAGGATGGGTACACCGGCTACGGCGCGGAGCAGGGGAAGGTGCGA AACCAGGCGCTTCTGGGCAAAATCATTGTTCGCTGGTATCACGAGGCTGT TACATACGGGCACATCCAGGCCACACGAGTCGTTTGTTGTCACCTGTCCT TGGAACTTGCTTGTTCTCGACATGGAGCAAGGCAGAGATATGTCCCAAGT GTCGGGACGAATCAAAGAGCATTTGAGACCGTTTGTTTTGGGCCGTTCGT TTGACCTGCAGATGTCGATCAGTAAGGCGGGCGGACATATGTTCGACGTG CAATGGAGGGTGCATCCCCGCAGCCTCCGGTAGGTACAGGTGCCCTTTCG GAAAACAGCAGTGAGTGTTAGCATTGGCGTTGCATACGCGATATCGACAG GGCGGGATTTCCAGGGAGAGGCGACAAAGGTCTCGGTCTCGGAAAAGAGG GGGAACAGAAGTGACAAGAGGAAGAGAACAACGGGGAAGGGGGCAGTAAT TCCTGCACAAAGCATCCGCCCGCTTTGTAGCGGGGGCACACATGTCTCTC TGAACTGGCTCGCCAACCTGGCGGCAGCTGATGACTATGTCCCGCTCCTA CCGTCGTACTTCGTACATATGTTTATGTTCAAGGCGGGGTGAAACATGCC GCGCTCATAAAACGAACGGGAGATGCACCGTGGCACACCCGCTTTCACGC GCATTTTCACAACTCCTATGACAACATCCCCGAATCATCACGAATTATTT TTGATTTCTCAGTAGGCAAGGACGGAGACTCACATCCACTGCTGTAGGGT CGGGAGCAGATTCAACGAACGAACGCAGCCCAATCCAATGCAATCCAAAC TGAAACTAAAAGAAACCCCAACCCATCCCAATCCAATGGAAACTACTGCT GCGTGGCGAGAAAAGGCCGACATCCGCGAGAAGATCTCACAGAAGCTGTA CAACGGGCTGATCAACCCCGACGAGGTCTTCGTGAGCGACGGCGCTAAGT GCGACATAGGCCGCCTGCAGATGATGTTCGGCCCGGGGGTGGTCTCCGCT GTGCAGGTACGCGATGGGGTTGGTTTGGTACCGGTTCGTTGTGTGGGGTT TGATGCGGCGTTGTTGTGTGTGTATGTACATATGTGTTGGTCCACGGCAC GTCGACGCTACGTGATCGTTCGTACTCTGTACTGTATGCTCGTGCAGGAA ATATATGTCCCCGTCGACGCTGCATGAAGGAGTCGAGCCCTTGGATGTTG TTGGCATTTCCGTGTGTGTTTGTGTAGATAAATGTGTGTCCATTGTCGCA GCTGTATGTAGCAGTCGAGCACCCGGAATTTGTTGGCCTCTTCTTGTGTT GTTGTTATTGTTGTAATTGTTGTTGTTTTCCGCTGCAGGGTCTGACACTA TGTCTATGACACACCGCTGCTGTTGGCTTGTAAAGATGTGCATCTCTTGG ATGGTCTGTTCGTGTCGAAAACTTCTTGTGACTAGCAGACCAAATGTAAC ACACGACGCAGATATCCACCGCACGACGACTACTTTTTTGCCTCGTTTTT AATATGATGCATGGTCGTGACGAAGGTGGTTTGGAAGAGGCAACCCTGAT TTGTGTCTTCCTCGTCGCTCCTCTTCGCGCTGTCTCTCTTGGCTGTTACC AAGTGTTAGCATGCCCAATCCTTCCTGGTCAACCCATTTTTTTTTTTTTT TCAGGAATCTGTTGTCCTGGGCCGATATTTTGTGGTTTGGGATTATTTTG GTACACGCCGTATGTATGCTAAACCGGCGTACATTCTCACACGTTTACAT CTATTTTCTCCGTTCTGATTGCTCTTTTTTTCATTCTGATTTGCTTCCGT ATTTTTATTTTTTACTCATTTTCGTGCAGGACCCTTCCTACCCGGTGTAC GTAGACACCTCGGTGATGATGGGACAGACCGGCGAGATCAACGAGGACAC CATGCAGTACGACAACATCGTTTACATGCCGTGCAAGCCGAGCAACGACT TTTTCCCTGACCTCGAGGTTAGTTACACGGTATTGCCTTGTTTATGATAT GTCAGTTTATATGTTTCTCTATCTCCTAGTATAAGATGTGTGTGTTTTGT GACCACGGGCGAGACGATAGCGGTTAGCTAGTGTGGTAATCAACAACAAT CACCGACATCAACATGGATGCACCTGTCCTTTCGGTGTGCTGACTGTGGT AGGTTTGTTGATCGTGCACTTTCGATCAATCAGTCAACCCTTTCTGTTGC GTGTTGCACATATCTGTCCGTCCCCGTTTCCGCGTGCGGCGACTGAACTA CCGCCAATCTCCGGGGGTGTTCCACGCGAACAGTCGTTGCCCCACGCGGA CGTGATCTACTTCTGCTCCCCGAACAACCCGACGGGAGCCGTTGCCACCC GCGAGCAGCTGGAGGCGCTCGTCGCGTACGCGAACAAGAAGGTGGGCCAG GGTCCCAGCGCAAACGGGAAACCAAGCGGGATATGTTGACTTGGAGCAGG CAGTAACGATCACAGGCCGAGCCTCGTTGCTCTCTGTGTGTGTGTTGTGA AACCGTCGATGTTCGATGGCAGCATCGATCAAAACCTGAGCACCCAAAAA TAGCGCTTGTTATCTTTCGTTTCTGTTGTTTGTAGTTTATACCTGGTGCA TCGTTTGTTTGTTTTTGTCGGCGATCTTTCGTTTCGTTTGCAAGGGCTCC ATCGTTGTCTTCGACGCCGCGTACGCGCCCTTCATCCGCACCCCGGGAGT GCCCAAGTCCATCTTCGAGATCGAGGGGTCGCGGTCCTGCTGCATCGAGG TAGAAAGGCTTCCCCTCCTGTACCGGCAACAGCAGCAGCGCTTGCTTTCG TTTCGCGCACTCAAGGTTTAATAAGAAAAACAGAGGCGTAGCAATAGCTT CAAGGATGCTGCCGGTGCTCCACGTCTGATCGGAATAGGCACCGGCGCCC CGTCTCAACCGGAATGCGTATTGCAAATAGGTAGCCAATGATCTATCAAG GCTATGAGAGCAATACGGGTGGATAAATGCCACCACTGACTGTGGTTCCT GACCCCCGAATGACCTTGTGTACGATCTATCAAGGCTATGAGAGCAATAC GGGTGGATAAATGCCACCACTGACTGTGGTTCCTGACCCCCGAATGACCT TGTGTACGAGTAGACCCTGTCAAGGTGTTGGCCTCCCGGTCTAGATCAAA ATCACCTCGATGAGTCTACACAAGGTCATTCGGGGTCAGGCGCCTTAGTC ATGGGAGGGGGGGGGGGGGATTTGTCCACCTGTGAAGACAAGCAACCAAC GTAGATCTCCTTTCCCGTCCCCCGCTCCGCCCGCTCCCCGGGCTCCTCGC CACTCAATACGTACTGCTGTGCCGCTTCACCCGCCCCTACAGGTGAACTC GTTCTCCAAGTACGCGGGCTTTACCGGCGCGCGGCTGGGGTGGACGGTCA TCCCCGACGAAGTCAAGTACGCCGACGGCTCGCCCGTAAGGAACGACTTT AACCGGGTCATGACAACCGCCTTTAACGGTGCCTCCAACATCGTGCAGGC AAGCGTAAAAAACTAGCGTAGGCTTACAGTAGCCCACCTCCTCTTTCAGG CAGGCAGGCAGGCGGGCAGTTCTTGTTGTGTCAGCTGCTACCCGCGTTGC TCTTTTTTCACGTTTTTGTTGTTTGTCGGTGGTGCTGGTGGCGCTGGTAT TTTCGCGTGTCGTTGTCGTGTTTTTGTGGGGTTTTCCATTCGTTACTGGC ACGAGTGTGTATCGCGTGCAAGTACAACGTCCCGGCTCCGCCTATTTTCA CCCTTGCGTGTTGTGCGCCCCATTCCCGCTCTCTCTCTCTCTCTCTCTCT TGTGCTGTGAAAAATGACTCACCGGTGTGTGCTCCACGCCATGCATGCTA TGAAAGAAAGGAAACGCCTGTAGAACCCAAGTGGGAATACCCTTGTTCTT CGCATTGGCGTCGACGACAGCGCTCATGCGGCGCAACCTGTAACCGCCAA GAGGTTAATAAATATGGCACAGGGAAAAACTCTCCTTGTTGATGCCGAAG ACAACGTCGGCCCCGTCTTTTCGTTTTTGAATGACTAGCACCTGAACGTG GAATTTCGTGTTTCCTCTCCCTTGTCCCTCCCTTCCTCCCCCCGCCGACG CTTGTCGTTAATGCCATGGATCGATGTTTGGGGGTGTGCCGTGGTGGCTG CTTCCGGCGTGCGTAGTCCGGGGGTCTGACTTGCCTTGACGACGAGGGAA TGGAGGAGATCTCGAATCTCATGGACTACTACCTCGAGAACGCCAGGATT CTCAAGGAGGTGCGTTTTTTCATCTCGTGTGTGAATTTACTCGATGGCAG CGCAAGGCGGTGTAATGTGTTTTTTCATCTCTTTCGTCTTGTGTTTTGCT TGAAATCGAAAGAGCTGAAAGTTGGTGTACATCGTAAGTCTGTTCAAGTA CAGCAGTTTACATTTTGAATTTTAGTTGGCTCGTGTCTGGTTGAAGGCAT TTGTCTCTCTAGCTTACTAAGAAAATTTCCCCAGTTGGTATCATGCCAGT GTGTTTTTATTGTTTTCGGCTCTCGTCTGAAATGATCGCGTTTTTTTTTG GCTCTCGGATGGATGAGATAGGTAACGATCAGAGGGAGAGTGAAATGGCG TGATTGCTCTAATGATAAATGCATATTTCGAGTCGCACGGGGGATGGACC TTGGGAAACTTGTACCGATCGGTGCCAATGAAATTGAAAATATTCACGTC TAATGATGTTGCCGCATCGCCAAAAGCCCCGCGCGAAACAACTGCTTCCA AAAGTACAGTCTCAAAAAATTTAGCGCCATACTTTGGTGCTTTGAGAAGT ACTTCAATACTCCGTCCTTGCTCTAGAAACCAAGGGGGTGTTTCAGTCCT GTGCTTTTTTTGCTGTCATTCCTCGAAGTATGTCTTTTACTGAAACTTGA AATAAATCACATTGATAAAATTGAAATAATCGTTGTTGTTTTTTGACGCT CTCATCATAGGGTATCGAGTCTTGCGGCTTCAAGTCTCACGGGGGAACAG ACGCGCCTTACGTGTACGTGGACTTGGAAGGGAAGCCGAGCTGGGATGTC TTCAGCGAAATCCTCGAGAAGGCGCAGGTATGTTCACTTGTCGTCCTCCG GGCTTTGATGAATAAACATGTAGCAGATTTTATCAGAGGGACAAAGCGAG ACCCCGACACTACTGCTGCCTAAAAAAGTTTATTGGAATAGGCACTCAAG GGGAAGTTTTTTTTTTTCTGTGATGAGTGGAGAGGACGAAATTCTACTTC TTGGTACACCTTTGTGGGACACACTTGACACCCCCAACAGAGACGCAGCA TGCAGCCTGGTACACAACAAGCCACAAGAATACTTCAAATTGATGCCCAT GCTATGCTAACGACAACCTTTCAGCAAGAGGGCGCAGAGAAAGAGAGAGA GAGAGAGAGAGAGCAGCGCAACCTCAAACGCCCTTCACACGACACAGGGG CATACGAACAGATTGGACTTCAACGCCGTGTGCCACGAAAACCCTAGTGT CTTGATACTTGTAGCTGAGTTTTTAGCCGAGTTTTTCACGATGGAGAGCG TGCGCGCGGGGTAGGGAGGGATGTTGGTCTACTGTATCTCCACTCATTTT GGGGGTTTGAGGGCTTCATGTGCGGATCACGAGTATGGCAAAGGAAACGG TCAATTTTCGATATGTGAAATGATTGATCGCGGTATATGAACCATATGTC TTGCAAGCATTCGCTTAGTCTCGTCTCGTCCAAATATTAATCTCCCGCCT TTCGCACGGGTGTACGCTCCAGCGTATGGTACACGCTCTTGTCTTGGGTC TGCAAGAGTTATGGTCGCGAGGATTCATACGAAAATGGTTGAGAGCTGAA CACACGTGTGTCGATATCTCTTTCGCTGAGTGACATTATACTGGCGTGTT GAGGTAGTATTTCGAGGCCGCGGAGATGTGCTTTGTGTTGTTCTTAGTAC GATCACGAGGATGGCATACGAAAATGGTTAAGAGCTGAATACACAAGTGT CGATACCCTCTTTCGCTGAGTGACGTACAACTGGTGTGCTGAAGTGTCGT GGGGGCGTGTATGTGCTTGTTCTATTTGAAAATGAATTACACAGCAGTTG TTCTTAGACTCACGAGGATGGCATACGAAAATGGTTAAGAGCTGAACACA TAAGTGTCGATATCTCTTCCGCTGAGTGACAACTGGCGTGTTGAGGTAGT GCTAAAAGTGCGTTAATGTGCTATTTGTTGGAAGGGGAAGGGGATGACAC AGCAGTTGTTCTTTACAGTATCACGAATACGGCATACAAAAAAGGTTGAG AGCTGAACACATGAGTGTCGATATCTGTTTCGCTGAGTACAACTGGTGTG CTGAAGTATACTTGCAGGGGCATGCATGTGCTTTGTTTTTGTCTGAAGGG AAAAAGGGTTGTTCATTATAGAATCACGAATATGGCATACGAAAATGGCC GAGAGAGCTTAGTACAATTCCCTTTTACGGAGTGACGTTATACTTGCGTG TTGAAGGCGTAATAAGAGTGCGTATATGTGCTTGCTTTGGTTGAAATGAA CTACACAGCAGTTGTTCTTCGTAGACTACGAGGATGGCATACGAAAATGG TTAAGAGCTGAACACAGAGTGTCGATATCTCTTTCGCTGAGTGACGTACA ACTGGCGTGTTGAGGTATCGTGGGGGCGTGCATGTGCTTTGCTTTGGTCG GAAGGGAACTGAAACAGCATTTGTTCTTAAGAGACTCACGAGGATGGCAT GCAAAAATGGTTAAGAGCTGAACACATGAGTGTCGATATCTCTTTCGCTG AGTGACGTACAACTGGTGTGCTGAAGTATACTTGCAGGGGCGTGCATGTG CTTTGTTTAAGTCGGAAGGGAAAAATAGTTGTTCTTTATAGAATCACGAA TGTGGCATGTACGAAAATGTCCGAGAGCTTAATACAAATCTTTTTTATGG AGTGACGTTATACTTGCGTGTTGAAGGCGTAATAAGAGGGCGCATATGTG CTGTTTCGGTTGAAAATGTAATACACAGCAGTTGTTCTTCCTAGACTCAC GAGGATGTCATACGAAAAATGGTTCAGAGCTGAACACATTAGTGTCGGTA TCTCTTTCGCTGAGTGACTACAACTGGCGTGTTGAGATAGTGCTAAAAGT GCGTTAATGTGCTAATGTTGGAAGGGAATGACACAGCAGTTTTTCTTGGT GGAATTGCGTACGAGCATGGTGAAGAGCTTAACATTTAAGTGTCGATATC TCTTTCGCTGAGTAACCTACAACCGGTGTGCCGAAGTTGCTTCGTGGGGG CGTGCGTGTGCTTTGTTTTGGTCGGAAGGGAATGGCACAGCAGTTGTTCT TGATAGTCTCACGATGATGGCATACGAAAATGGTTAAGAGCTGAACACAC ACGTGTCGATATCTCTTTCGCTGAGTGACGTGCAACTGGTGTGCTGAAGT AATATTGCGAGGGCGTGCATGTTCATTGTGTTTGGTCGGAAGCGAATGAT ACAGCAGGTTGTTCTTAATACGATCACGAGGATGGCATACGAAAATGGTT AAGAGCTGAACAAACAAGTGTCGATATCTCTTTCGCTGAGTGACGTACAA CTGGTGTGCTGAAGTAACACTTACAGGGGCGTGCATGTGCCTTGTTTTGG TCTTCAAAATAGGGAAGTTTTTGAACAGACTCACGAGAAGACCTCAATAC ACGAGTGTTGATATCTCTTTCGCTGAGTTACGTGATGCGGGCGCGTTCAA GCAGTTGTGAGATGACGTCTGCATCCTTTAAGTTTGTACCGAAGAGGGTG GGAATGGCGAAGACAAGGAGTCACGAGAACGGCATACAAAATTGGTTGAG AGCTGAACACAAAAGTGTCGACACCCTACTGGCTGAGTGACGTATACCCA CGTGTTCACGTGGGTCTCCCTCACACTGTAGGCTTTGTCCGGGTACTCCT CCATTCGTATATAAGGTGAATATGGTACTCGAGGCCTCTGTATCGGGTTT TTGCACGTTTCCATGCAAGACGCTAGAGGCCACGGAGGGCGTCGGCCTCC ATTTTGCCACACTCCGCCGAACGCGCTCGACGTTTTCTGTCGTCACCCAA AAGTGCGATGGTTTCCACGGTCATTCCGAAGAGATTTGTATTTTATCTCG GAAGGGGTGCGTGATCATACTGTGTCAAATTACGAAGGCAAGGAAAAGTT GAGTAACTCCCCCCCCCCTGCTTCGGGTTCGTGTGTCCGTTTTTTACCCT TCTCTTTGTTTTCGTCCGTCACAGGTGGTGACAATCCCGGGAGCGGGCTT CGGCCCCGGCGGTGAAGGTTTCCTGCGATTGTCAGCGTTTGCTCCTAGGG AATCGTGTGTAGAAGCCGTTGAACGGTTGCGCGCGGTGTTGGCCTAA
back to top

Coding sequence (CDS) from alignment at P-littoralis_Contig81:612118..623264-

>mRNA_P-littoralis_Contig81.173.1 ID=mRNA_P-littoralis_Contig81.173.1|Name=mRNA_P-littoralis_Contig81.173.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1254bp|location=Sequence derived from alignment at P-littoralis_Contig81:612118..623264- (Pylaiella littoralis U1_48)
ATGGTCGCGACACCCGACAAGGTCGGCAGCGGAGTCAAGCGCAACGAGAA
CTTCGCGAAGCTGAAGGCGGGTTACCTGTTCCCGGGGATCGCCAAGCGCC
GTAACGCGTACCTGGAGGCCAACCCCGACTGCCGGCCCATCATCTCGCTG
GGGATTGGGGACACGACTCAGCCGATCCCGCCGCACATCTTGAGCGGCCT
GGTTGGGGGGGCCGAGGCACTCGGAACCCAGGATGGGTACACCGGCTACG
GCGCGGAGCAGGGGAAGGCCGACATCCGCGAGAAGATCTCACAGAAGCTG
TACAACGGGCTGATCAACCCCGACGAGGTCTTCGTGAGCGACGGCGCTAA
GTGCGACATAGGCCGCCTGCAGATGATGTTCGGCCCGGGGGTGGTCTCCG
CTGTGCAGGACCCTTCCTACCCGGTGTACGTAGACACCTCGGTGATGATG
GGACAGACCGGCGAGATCAACGAGGACACCATGCAGTACGACAACATCGT
TTACATGCCGTGCAAGCCGAGCAACGACTTTTTCCCTGACCTCGAGTCGT
TGCCCCACGCGGACGTGATCTACTTCTGCTCCCCGAACAACCCGACGGGA
GCCGTTGCCACCCGCGAGCAGCTGGAGGCGCTCGTCGCGTACGCGAACAA
GAAGGGCTCCATCGTTGTCTTCGACGCCGCGTACGCGCCCTTCATCCGCA
CCCCGGGAGTGCCCAAGTCCATCTTCGAGATCGAGGGGTCGCGGTCCTGC
TGCATCGAGGTGAACTCGTTCTCCAAGTACGCGGGCTTTACCGGCGCGCG
GCTGGGGTGGACGGTCATCCCCGACGAAGTCAAGTACGCCGACGGCTCGC
CCGTAAGGAACGACTTTAACCGGGTCATGACAACCGCCTTTAACGGTGCC
TCCAACATCGTGCAGGCAAGCTCCGGGGGTCTGACTTGCCTTGACGACGA
GGGAATGGAGGAGATCTCGAATCTCATGGACTACTACCTCGAGAACGCCA
GGATTCTCAAGGAGGGTATCGAGTCTTGCGGCTTCAAGTCTCACGGGGGA
ACAGACGCGCCTTACGTGTACGTGGACTTGGAAGGGAAGCCGAGCTGGGA
TGTCTTCAGCGAAATCCTCGAGAAGGCGCAGGTGGTGACAATCCCGGGAG
CGGGCTTCGGCCCCGGCGGTGAAGGTTTCCTGCGATTGTCAGCGTTTGCT
CCTAGGGAATCGTGTGTAGAAGCCGTTGAACGGTTGCGCGCGGTGTTGGC
CTAA
back to top