mRNA_P-littoralis_Contig81.146.3 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig81.146.3 vs. uniprot
Match: A0A6H5KL44_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KL44_9PHAE) HSP 1 Score: 483 bits (1244), Expect = 1.530e-161 Identity = 233/302 (77.15%), Postives = 265/302 (87.75%), Query Frame = 1
Query: 322 AAGASLLAVGLATVCWYAFGALGREKSRSPPGSIRTLRGFEPTEILKDEDDGRVVTFLGRFTWQKEGEVALVKLIAKPMTLDTLEDNLSRLTAKLKSESGAEYAFYDCSMSLWNTFLRGVEGNSYSLEVVAPASERTVNRNRPVTTAMVVETAEMHASVTAPHIDTVVGDGRALSWLFNVLSKQKEADRVLCEDADPEHGFILNIDTKWRTHPDISTVPQEEWHGHPSVTELYCLAICHRRGIRTLRDLRSEHVPMLKEMYRRGVDTIEAVYGVPEDQLRVFVHYLPQFFHFHVHFTRQALV 1227
AA LLA+G+A W GR+ S IR+LRGFEP E+LKDEDDGRVVTFLGRF WQKEGEVALVKLIAKP++L L+DNLSRL+ +LKS+SGAEY+FYDCS+SLW TFLRG+EGNSYSLEVVAPASERTVNRNRPVTTAM+ ETAEMHASVT PH+D +VGDG++LSWLFNVLSK+KEA+RVL ED DPEHGF+LNIDTKWRTHPDIST P+ EW GHPSV ELYCLAI H+RGIRTLRDLR++HVPMLKE+Y RGV+TIEAVYGVPEDQLRVFVHY+PQFFHFHVHFTR+ ++
Sbjct: 14 AAAGVLLAIGVAVAFWV-IARRGRKSVTSALAGIRSLRGFEPEEVLKDEDDGRVVTFLGRFAWQKEGEVALVKLIAKPLSLSGLKDNLSRLSIRLKSDSGAEYSFYDCSLSLWYTFLRGLEGNSYSLEVVAPASERTVNRNRPVTTAMLTETAEMHASVTGPHMDRIVGDGKSLSWLFNVLSKEKEAERVLYEDEDPEHGFLLNIDTKWRTHPDISTTPRHEWEGHPSVGELYCLAISHQRGIRTLRDLRAKHVPMLKEIYGRGVETIEAVYGVPEDQLRVFVHYMPQFFHFHVHFTRRVVL 314
BLAST of mRNA_P-littoralis_Contig81.146.3 vs. uniprot
Match: A0A0M0JXI4_9EUKA (Scavenger mRNA-decapping enzyme n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JXI4_9EUKA) HSP 1 Score: 245 bits (626), Expect = 4.720e-71 Identity = 122/247 (49.39%), Postives = 170/247 (68.83%), Query Frame = 1
Query: 481 VVTFLGRFTWQKEGEVALVKLIAKPMTLDTLEDNLSRLTAKLKSESGAEYAFYDCSMSLWNTFLRGVEGNSYSLEVVAPASERTVNRNRPVTTAMVVETAEMHASVTAPHIDTVVGDGRALSWLFNVLSKQKEADRVLCEDADPEHGFILNIDTKWRTHPDIST--VPQEEWHGHPSVTELYCLAICHRRGIRTLRDLRSEHVPMLKEMYRRGVDTIEAVYGVPEDQLRVFVHYLPQFFHFHVHFTR 1215
++ LGRF+WQ +GE ALVKL+ KP++L + L L + S SGAEY +YD SL + +YS+EV+APASE+ + R RP ++ E A ++ASV P I+++ D +A++W+ N+L+ +KE +R+L D+DPE GF+LNIDTKW++HP + + W H SV +LYCLAICHRR +R+LRDLR+ H+P+L+ + G IEAVYGVP D+LRVFVHY PQF+HFHVHFTR
Sbjct: 1 MIVVLGRFSWQAKGETALVKLVPKPLSLAS--GLLGALDVNVSSYSGAEYCYYDGRCSLSSLCTTAGLRPAYSVEVIAPASEKQIARLRPERGTLITEDAALYASVVQPFIESM--DPKAIAWVANLLALKKETERLLFNDSDPERGFLLNIDTKWKSHPPCVSDEFARVAWRCHASVQDLYCLAICHRRDLRSLRDLRARHLPLLRHILHEGCRVIEAVYGVPVDELRVFVHYQPQFYHFHVHFTR 243
BLAST of mRNA_P-littoralis_Contig81.146.3 vs. uniprot
Match: A0A7S3SDN6_EMIHU (Hypothetical protein n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A7S3SDN6_EMIHU) HSP 1 Score: 229 bits (583), Expect = 6.950e-64 Identity = 125/268 (46.64%), Postives = 168/268 (62.69%), Query Frame = 1
Query: 418 SIRTLRGFEPTEILKDEDDGRVVTFLGRFTWQKEGEVALVKLIAKPMTLDTLEDNLSRLTAKLKSESGAEYAFYDCSMSLWNTFLRGVEGNSYSLEVVAPASERTVNRNRPVTTAMVVETAEMHASVTAPHIDTVVGDGRALSWLFNVLSKQKEADRVLCEDADPEHGFILNIDTKWRTHPDISTVPQ--EEWHGHPSVTELYCLAICHRRGIRTLRDLRSEHVPMLKEMYRRGVDTIEAVYGVPEDQLRVFVHYLPQFFHFHVHFTR 1215
S+R L F+ +E+L E +G V LG F+WQ GE ALVK+ A D + L L S SGAEYA+Y S SL + + +++LEV+APASE+ + R+RP V ETA ++ + AP+ID + D ++ SW+ L KEA+RVL D GF+LN+DTKW++HP + PQ W GH +V +LYCLAICHRR IR+LRDL +EH+P+L+ + +GV T+ YGV LRVFVHY PQF+HFHVHFTR
Sbjct: 39 SLRDLSSFKQSEVLS-EGEGHAV-LLGAFSWQPAGERALVKISAVDRASS---DVAAHLETSLSSYSGAEYAYYRGSASLASVLWKRP---AFALEVIAPASEKQIARSRPQPGVFVTETAALYHAAVAPYIDAL--DPKSTSWIDKCLDLSKEAERVLFNDPAEPTGFLLNVDTKWKSHPPCTADPQLRASWRGHTAVKDLYCLAICHRRDIRSLRDLTAEHLPLLRRILDQGVRTLCETYGVEPHDLRVFVHYQPQFYHFHVHFTR 296
BLAST of mRNA_P-littoralis_Contig81.146.3 vs. uniprot
Match: W7TMI8_9STRA (Histidine triad protein member n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TMI8_9STRA) HSP 1 Score: 213 bits (541), Expect = 8.370e-58 Identity = 119/297 (40.07%), Postives = 170/297 (57.24%), Query Frame = 1
Query: 430 LRGFEPTEILKDE----DDGRVVTFLGRFTWQKEGEVALVKLIAKPMTL---------------------------DTLEDNLSRLTAKLKSESGAEYAFYDCSMSLWNTFLRGVEGNSYSLEVVAPASERTVNRNRPVTTAMVVETAEMHASVTAPHIDTVVGDGRALSWLFNVLSKQKEADRVLCEDA----DPEHGFILNIDTKWRTHPDISTVPQEEWHGHPSVTELYCLAICHRRGIRTLRDLRSEHVPMLKEMYRRGVDTIEAVYGVPEDQLRVFVHYLPQFFHFHVHFTR 1215
LR F E+L DE DG V LGRFTWQ E A++K+ + + +L LS L+ +++ ESGAEY +Y S+S + G+ +Y +EV+APAS R + R ++ E+ ++ P D V G+GR+L W++N+L +KEA+R++ ED D GF+L D KW++HPD S P+EEW HPS + L CLAI H R I +LRDLR H+P+L+ + +G+ IEAVYGV ++++RVFVHY+PQFFHFHVHF+R
Sbjct: 42 LRDFIMEEVLTDEVTPSPDGYTV-LLGRFTWQGRDEKAILKMRPEQLPARDNAVTREHSHTGKGILKNGFWVSCKRQSLHRALSHLSLRVQLESGAEYGYYSGSLSPLSMAYLGIP-LTYHIEVIAPASPRQIVRAHVEKRVLIRESPALYRVALGPLADEVRGEGRSLQWVYNILEHKKEAERIVFEDPPDPLDSSKGFVLVPDPKWKSHPDPSRTPKEEWRHHPSTSGLACLAIVHDRSIGSLRDLRRRHLPLLQSLLAKGLAAIEAVYGVGKEEVRVFVHYVPQFFHFHVHFSR 336
BLAST of mRNA_P-littoralis_Contig81.146.3 vs. uniprot
Match: A0A7S1J2I8_9EUGL (Hypothetical protein (Fragment) n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1J2I8_9EUGL) HSP 1 Score: 196 bits (498), Expect = 3.440e-54 Identity = 93/183 (50.82%), Postives = 124/183 (67.76%), Query Frame = 1
Query: 610 SESGAEYAFYDCSMSLWNTFLRGVEGNSYSLEVVAPASERTVNRNRPVTTAMVVETAEMHASVTAPHIDTVVGDGRALSWLFNVLSKQKEADRVLCEDADPEHGFILNIDTKWRTHPDISTVPQEEWHGHPSVTELYCLAICHRRGIRTLRDLRSEHVPMLKEMYRRGVDTIEAVYGVPEDQL 1158
S SGAEY +Y SLW+ G YSLEV+APA++R + R+R + M+ ET E + VT P I ++V G +L WL+NVL +KE +R+L D DP+ GFILN+DTKW++HP+ TVP+ W GHPSV LYCL ICHRR I +LRDLRS H+P+L+ M R+G TI+ YG+ D+L
Sbjct: 24 SYSGAEYCYYAGQPSLWSILADPELGRQYSLEVIAPATDRQIERSRLLPHRMIEETREDYKRVTEPFIFSIVSSGTSLQWLYNVLELKKETERLLYNDPDPKVGFILNVDTKWKSHPNCHTVPRASWKGHPSVRWLYCLGICHRRDIASLRDLRSCHLPLLQAMLRKGQQTIKEDYGLEPDEL 206
BLAST of mRNA_P-littoralis_Contig81.146.3 vs. uniprot
Match: A0A7S2HS95_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2HS95_9EUKA) HSP 1 Score: 196 bits (498), Expect = 7.540e-54 Identity = 99/199 (49.75%), Postives = 132/199 (66.33%), Query Frame = 1
Query: 625 EYAFYDCSMSLWNTFLRGVEGNSYSLEVVAPASERTVNRNRPVTTAMVVETAEMHASVTAPHIDTVVGDGRALSWLFNVLSKQKEADRVLCEDADPEHGFILNIDTKWRTHPD-ISTVPQEE-WHGHPSVTELYCLAICHRRGIRTLRDLRSEHVPMLKEMYRRGVDTIEAVYGVPEDQLRVFVHYLPQFFHFHVHFTR 1215
EYA+YD SL + + +Y+LEV+APASE+ + R+RP VVETA ++ +V P I+++ D A +W+ VL KE +RVL D +PE GF+LN+DTKW++HP + V Q W GH SV +LYCLAI HR +R+LRDLR H+P+LK + RG +TI VYGV + RVFVHY PQF+H HVHFTR
Sbjct: 1 EYAYYDAVSSLRHLLINRRLRPAYALEVIAPASEKQIARSRPQAGVFVVETAAVYNAVVRPFIESL--DPAATAWIRKVLDLSKEKERVLFNDTNPETGFLLNVDTKWKSHPPCVEDVAQRAAWRGHESVKDLYCLAIVHRSDLRSLRDLRESHLPLLKHILLRGTETIRNVYGVQPAECRVFVHYQPQFYHLHVHFTR 197
BLAST of mRNA_P-littoralis_Contig81.146.3 vs. uniprot
Match: A0A7S4D8L5_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D8L5_HETAK) HSP 1 Score: 198 bits (504), Expect = 2.690e-53 Identity = 106/287 (36.93%), Postives = 168/287 (58.54%), Query Frame = 1
Query: 421 IRTLRGFEPTEILKDEDDGRVVTFLGRFTWQKEGEVALVKLIAKPMTLDTLEDNLSRLTAKLKSESGAEYAFYDCSMSLWNTFLRGVEGNSYSLEVVAPASERTVNRNRPVTTAMVVETAEMHASVTAPHIDTVVGDGRALSWLFNVLSKQKEADRVLCEDAD--PEHGFILNIDTKWRTHPDISTVPQEEWHGHPSVTELYCLAICHRRGIRTLRDLR-SEHVPMLKEMYRRGVDTIEAVYGVPED-----------------QLRVFVHYLPQFFHFHVHFTRQA 1221
++ L GF+ E+L D ++G+ V G G+ A++K + T + L NL L SESGAEYA++ ++ + + + SY LE++ PAS+R + R+ V +V ET++ +A++T P+I +V+GDG +L W++N+L K+KE +R++ + PE FI+NIDTKW+THPD P+E+W ++YCL I RG+++LRDLR + H+P+L+ + G+ + A+Y +P QLRVFVHY PQF+HFHVH+ A
Sbjct: 6 LKHLSGFQFEEVLTDNNNGQFVVLKGILN----GKPAVLKFNSLHATAEQLLSNLCSAKLDLHSESGAEYAYFHATI---HNGVSKKQNPSYHLEIICPASDRQIRRSTTVPLILVDETSKDYANITLPYIQSVIGDGGSLQWVYNILDKKKEVERIVYDTGGTGPE-DFIINIDTKWKTHPDPKETPREKWKDLVKPEDIYCLGIVQLRGLKSLRDLRGAAHLPLLRRLAGEGLSQVAALYSLPRGPGGXXXXXXXXXARLRRQLRVFVHYQPQFYHFHVHYVHAA 284
BLAST of mRNA_P-littoralis_Contig81.146.3 vs. uniprot
Match: A0A7S2XNU1_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XNU1_9STRA) HSP 1 Score: 197 bits (502), Expect = 5.540e-53 Identity = 106/243 (43.62%), Postives = 150/243 (61.73%), Query Frame = 1
Query: 523 EVALVKLIAKPMTLDTLEDNLSRLTAKLKSESGAEYAFYDC---------SMSLWNTF--LRGVEGNSYSLEVVAPASERTVNRNRPV-TTAMVVETAEMHASVTAPHIDTVVGDGRALSWLFNVLSKQKEADRVLCEDADPEHGFILNIDTKWRTHPDISTVPQEEWHGHPSVTELYCLAICHRRGIRTLRDLRSEHVPMLKEMYRRGVDTIEAVYGVPEDQLRVFVHYLPQFFHFHVHFTR 1215
E V+ + L L D RLT SESGAEY++Y+ + TF +G + +E+++PA+ R + R P +TA+V ET EM+ +VT P I ++ +G +LSW+ NV+ +KE +R+L D F+LN+DTKWR+HPD + P+ EW+ HP+ +LYCL I + G+RTLRDLR EHVPMLK M + G I+ +YG+ +Q+RVFVHY PQF+HFHVHFTR
Sbjct: 46 ETEKVESVPSSTVLSFLSDFHFRLT----SESGAEYSYYEALPTPIFSEGQVERTPTFPGASSTQGG-FKMEMISPATYRQIARAMPAPSTALVNETPEMYQTVTEPFIASIC-EGNSLSWICNVVDAKKEVERLLVNHKD----FVLNVDTKWRSHPDALSTPRSEWYQHPATADLYCLGIVKQSGLRTLRDLRGEHVPMLKAMMQEGTKAIQTIYGIESNQIRVFVHYQPQFYHFHVHFTR 278
BLAST of mRNA_P-littoralis_Contig81.146.3 vs. uniprot
Match: K8EMC5_9CHLO (Uncharacterized protein n=1 Tax=Bathycoccus prasinos TaxID=41875 RepID=K8EMC5_9CHLO) HSP 1 Score: 197 bits (501), Expect = 1.060e-52 Identity = 109/296 (36.82%), Postives = 163/296 (55.07%), Query Frame = 1
Query: 412 PGSIRTLRGFEPTEILKDEDD----GRVVTFLGRFTW---QKEGEVALVKLIAKPMTLDTLEDNLSRLTAKLKSE-SGAEYAFYDCSMSLWNTFLRGVEGNS--------YSLEVVAPAS-------------ERTVNRNRPVTTAMVVETAEMHASVTAPHIDTVVGDGRALSWLFNVLSKQKEADRVLCEDADPEHGFILNIDTKWRTHPDISTVPQEEWHGHPSVTELYCLAICHRRGIRTLRDLRSEHVPMLKEMYRRGVDTIEAVYGVPEDQLRVFVHYLPQFFHFHVHFT 1212
P ++TLRGF+ ++IL D D G VV LG F ++E E ++KL P+ LD L+ +T + SG EY +Y GV NS S++V+ P + ++RN+ + E + + + P+I+ + A+ W+ +L+K+KE +R+L +D D GF+LN D KW THPD T P+E+W HPS ELYCL +CHR+ +R+LRDLR+ H+PML+ M ++G + I+ YG+ + LR+FVHY PQF+HFHVHFT
Sbjct: 7 PEKLQTLRGFKVSKILNDGKDSSSFGNVVALLGTFPGLMEEEEEESVVLKLSRPPIPLDDLDQLADAITLYERMPYSGMEYGYY-----------HGVVNNSSETFFAPYVSVDVLYPGCLKDESKEAKAKLLAKHISRNQAQRPVIFRENPKTYENAHLPYIEAIPSS--AIGWVHKILNKEKELERLLFDDDDVNDGFLLNTDPKWTTHPDPKTTPKEQWMNHPSTRELYCLGLCHRKDVRSLRDLRAAHLPMLRAMAKKGREVIKNTYGLANESLRIFVHYPPQFYHFHVHFT 289
BLAST of mRNA_P-littoralis_Contig81.146.3 vs. uniprot
Match: C1MPA0_MICPC (Predicted protein n=1 Tax=Micromonas pusilla (strain CCMP1545) TaxID=564608 RepID=C1MPA0_MICPC) HSP 1 Score: 194 bits (493), Expect = 8.120e-52 Identity = 103/276 (37.32%), Postives = 157/276 (56.88%), Query Frame = 1
Query: 412 PGSIRTLRGFEPTEILKDEDDGRVVTFLGRFTWQKEGEVALVKLIAKPMTLDTLEDNLSRLTAKLKSE-SGAEYAFYDCSMSLWNTFLRGVEGN--------SYSLEVVAPASERTVNRNRPVTTAMVVETAEMHASVTAPHIDTVVGDGRALSWLFNVLSKQKEADRVLCEDADPEHGFILNIDTKWRTHPDISTVPQEEWHGHPSVTELYCLAICHRRGIRTLRDLRSEHVPMLKEMYRRGVDTIEAVYGVPEDQLRVFVHYLPQFFHFHVHFT 1212
P + +LRGF+ + +L D + VV LG F V VKL P+ L L+ + +T ++ SG EY +Y ++ + F G+ + + S E A + V+RN + E +A+ P+ID + A+ W++ +L+K+KE +R+L +D D GF++N D KW THPD P+E+W HP ELYCL +CHR+ +R+LRDLR+ H+PML+ M R+G + I+ YG+ ++ LR+FVHY PQF+HFHVHFT
Sbjct: 10 PDRLPSLRGFKTSRVLNDGKESGVVALLGTFPGCDTESV--VKLSRPPIPLGDLDGLATAVTLSERAPYSGMEYGYYHGVVA--SEFAPGLSVDVLYPGCLANESEEARAKLLAKHVSRNASQAPVVFRENPRAYAAAHLPYIDAIPSS--AIGWVYKILNKEKELERLLFDDDDANDGFLVNTDPKWVTHPDPKATPKEQWMNHPGTRELYCLGLCHRKDVRSLRDLRAAHLPMLRAMARKGREVIKNTYGLADESLRIFVHYPPQFYHFHVHFT 279 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig81.146.3 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig81.146.3 >prot_P-littoralis_Contig81.146.3 ID=prot_P-littoralis_Contig81.146.3|Name=mRNA_P-littoralis_Contig81.146.3|organism=Pylaiella littoralis U1_48|type=polypeptide|length=386bp MEETGGFQAAGASLLAVGLATVCWYAFGALGREKSRSPPGSIRTLRGFEPback to top mRNA from alignment at P-littoralis_Contig81:494665..500135+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig81.146.3 ID=mRNA_P-littoralis_Contig81.146.3|Name=mRNA_P-littoralis_Contig81.146.3|organism=Pylaiella littoralis U1_48|type=mRNA|length=5471bp|location=Sequence derived from alignment at P-littoralis_Contig81:494665..500135+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig81:494665..500135+ >mRNA_P-littoralis_Contig81.146.3 ID=mRNA_P-littoralis_Contig81.146.3|Name=mRNA_P-littoralis_Contig81.146.3|organism=Pylaiella littoralis U1_48|type=CDS|length=1158bp|location=Sequence derived from alignment at P-littoralis_Contig81:494665..500135+ (Pylaiella littoralis U1_48)back to top |