mRNA_P-littoralis_Contig81.92.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig81.92.1 vs. uniprot
Match: A0A6H5K3F2_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3F2_9PHAE) HSP 1 Score: 201 bits (511), Expect = 3.730e-60 Identity = 98/172 (56.98%), Postives = 121/172 (70.35%), Query Frame = 1
Query: 1 RQRRSWAAYSKPLLADGTFRSSFRMDHDDFMDLVDMLRPEMERNPHMGSLRNGAVPVEYQVGNTLRWFAGGQMLDIKQGHVIAKSTAYQTAVRVIKAINACEALECRWPEKQTDYDSIAAGFNSRSTNGVIAKCVGAMDGLFVRTLRPNSRDTHEPNSFYSGHKKGFGMNFQ 516
R+RRSW Y+KP++ DGTFR FRMD+ +F L DMLRP++ERN MG+LRNG +PVE+Q+ LR+ AGG + ++ G+VIA+STAY RVI AIN L+C WPE + D + RSTNGVI CVGAMDGLFVR +P+ R P SFYSGHKKGFGMNFQ
Sbjct: 48 RERRSWYTYAKPMVQDGTFRLRFRMDYTEFALLADMLRPKLERNERMGALRNGVIPVEFQLAMALRFLAGGSVFEVMDGNVIARSTAYAIVHRVIDAINQTRELDCVWPEGEDALDQCGM-YRRRSTNGVIRMCVGAMDGLFVRMTQPSLRRHVNPRSFYSGHKKGFGMNFQ 218
BLAST of mRNA_P-littoralis_Contig81.92.1 vs. uniprot
Match: A0A6H5JJA1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJA1_9PHAE) HSP 1 Score: 192 bits (489), Expect = 4.220e-57 Identity = 92/172 (53.49%), Postives = 119/172 (69.19%), Query Frame = 1
Query: 1 RQRRSWAAYSKPLLADGTFRSSFRMDHDDFMDLVDMLRPEMERNPHMGSLRNGAVPVEYQVGNTLRWFAGGQMLDIKQGHVIAKSTAYQTAVRVIKAINACEALECRWPEKQTDYDSIAAGFNSRSTNGVIAKCVGAMDGLFVRTLRPNSRDTHEPNSFYSGHKKGFGMNFQ 516
R+RR + Y KP+L D TF FRM++DDF LVD LRP +++N G LRNGA+PVEYQV TLRW AGG + + GHVIA+STAY VI A+NAC L C+WPE + D + + + V+ KCVGAMDGLFVR ++P++++ EPN +Y+GHKKGFGMNFQ
Sbjct: 52 RERRPFETYIKPMLQDHTFSMRFRMEYDDFRVLVDHLRPALQQNEKTGLLRNGAIPVEYQVAMTLRWLAGGSIYEYMDGHVIARSTAYHVTSTVINALNACPELNCKWPEGE-DLPEPPSFSATAALMDVVRKCVGAMDGLFVRMIKPSAKEVAEPNLYYNGHKKGFGMNFQ 222
BLAST of mRNA_P-littoralis_Contig81.92.1 vs. uniprot
Match: A0A6H5K6M2_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6M2_9PHAE) HSP 1 Score: 190 bits (483), Expect = 6.680e-56 Identity = 94/172 (54.65%), Postives = 121/172 (70.35%), Query Frame = 1
Query: 1 RQRRSWAAYSKPLLADGTFRSSFRMDHDDFMDLVDMLRPEMERNPHMGSLRNGAVPVEYQVGNTLRWFAGGQMLDIKQGHVIAKSTAYQTAVRVIKAINACEALECRWPEKQTDYDSIAAGFNSRSTNGVIAKCVGAMDGLFVRTLRPNSRDTHEPNSFYSGHKKGFGMNFQ 516
R+RRS+ Y +P++ D TFR FRMD+ DFM L D+LRP+++R+ MG+LRNGA+PVE+Q+ TLR+ AGG + ++ +VIAKSTAY RVI AIN L C+WP D ++ A + RSTNGVI +CVGAMDGLFVR + P + P SFYSGHKK FGMNFQ
Sbjct: 52 RERRSFYTYVRPMVEDNTFRKRFRMDYTDFMTLADILRPKLQRDEKMGALRNGAIPVEFQLAMTLRFLAGGSVFEVMDSNVIAKSTAYAIVHRVIDAINQTRQLNCKWPYGD-DAEAQAELYRRRSTNGVIRRCVGAMDGLFVRLIPPCLKRHAVPGSFYSGHKKAFGMNFQ 222
BLAST of mRNA_P-littoralis_Contig81.92.1 vs. uniprot
Match: A0A6H5JVS8_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVS8_9PHAE) HSP 1 Score: 174 bits (442), Expect = 9.890e-51 Identity = 83/166 (50.00%), Postives = 109/166 (65.66%), Query Frame = 1
Query: 1 RQRRSWAAYSKPLLADGTFRSSFRMDHDDFMDLVDMLRPEMERNPHMGSLRNGAVPVEYQVGNTLRWFAGGQMLDIKQGHVIAKSTAYQTAVRVIKAINACEALECRWPEKQTDYDSIAAGFNSRSTNGVIAKCVGAMDGLFVRTLRPNSRDTHEPNSFYSGHKKG 498
R+RR + + KPLL D TF FRM++DDF L+D LRP + +N MG LR GA+PVEYQ+ TLRW AGG + + GHVIA+STAY VI A+NAC L C+WPE + D V+ KCVGAMDGLFVR ++P++++ EPN +Y+GH+KG
Sbjct: 52 RERRPFETHIKPLLQDHTFSVRFRMEYDDFRVLIDHLRPALHKNEKMGLLRIGAIPVEYQIAMTLRWLAGGSIYECMDGHVIARSTAYHVTSTVINALNACPELNCKWPEARMD---------------VVRKCVGAMDGLFVRMIKPSAKEVAEPNLYYNGHRKG 202
BLAST of mRNA_P-littoralis_Contig81.92.1 vs. uniprot
Match: A0A6H5L6B6_9PHAE (DDE Tnp4 domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6B6_9PHAE) HSP 1 Score: 169 bits (427), Expect = 1.180e-47 Identity = 80/141 (56.74%), Postives = 101/141 (71.63%), Query Frame = 1
Query: 97 LVDMLRPEMERNPHMGSLRNGAVPVEYQVGNTLRWFAGGQMLDIKQGHVIAKSTAYQTAVRVIKAINACEALECRWPEKQTDYDSIAAGFNSRSTNGVIAKCVGAMDGLFVRTLRPNSRDTHEPNSFYSGHKKGFGMNFQA 519
LVD LRP +++N MG LRNGA+PVE QV TLRW AGG + + GHVIA+STAY VI A+NAC L C+WPE + D A F +RS+ V+ KCVGA DGLFVR ++P++++ EPN +Y+GHKKGFGMNFQA
Sbjct: 73 LVDHLRPALQKNQQMGLLRNGAIPVEDQVAMTLRWLAGGSIYECMDGHVIARSTAYHVTSTVINALNACPELNCKWPEGE-DAARAAELFRNRSSMDVVRKCVGATDGLFVRMIKPSAKEVAEPNLYYNGHKKGFGMNFQA 212
BLAST of mRNA_P-littoralis_Contig81.92.1 vs. uniprot
Match: A0A6H5KD49_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KD49_9PHAE) HSP 1 Score: 151 bits (382), Expect = 3.460e-44 Identity = 72/126 (57.14%), Postives = 90/126 (71.43%), Query Frame = 1
Query: 139 MGSLRNGAVPVEYQVGNTLRWFAGGQMLDIKQGHVIAKSTAYQTAVRVIKAINACEALECRWPEKQTDYDSIAAGFNSRSTNGVIAKCVGAMDGLFVRTLRPNSRDTHEPNSFYSGHKKGFGMNFQ 516
MG LRNGA+PVE QV TLRW AGG + + GHVIA+STAY VI A+NAC L C+WPE + D A F +RS+ V+ KCVGAMD LFVR ++P++++ EPN +Y+GHKKGFGMNFQ
Sbjct: 1 MGLLRNGAIPVEDQVAMTLRWLAGGSIYECMDGHVIARSTAYHVTSTVINALNACPELNCKWPEGE-DAARAAELFRNRSSMDVVRKCVGAMDVLFVRMIKPSAKEVAEPNLYYNGHKKGFGMNFQ 125
BLAST of mRNA_P-littoralis_Contig81.92.1 vs. uniprot
Match: A0A6H5KCG0_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCG0_9PHAE) HSP 1 Score: 108 bits (270), Expect = 3.910e-25 Identity = 58/114 (50.88%), Postives = 65/114 (57.02%), Query Frame = 1
Query: 184 GNTLRWF--AGGQMLDIKQGHVIAKSTAYQTAVRVIKAINACEALECRWPEKQTDYDSIAAGFNSRSTNGVIAKCVGAMDGLFVRTLRPNSRDTHEPNSFYSGHKKGFGMNFQA 519
GN R + GG + ++ G V AKSTAY RVI AIN +C WPE D + RSTN VI CVGAMDGLFV P+ R P FYSGHKKGFGMNFQA
Sbjct: 41 GNERRTYNGTGGSIFEVMDGCVFAKSTAYAIVYRVIDAINQTREFDCVWPEGDDALDQCGV-YRQRSTNNVIHMCVGAMDGLFVLIFEPSLRRHVNPRGFYSGHKKGFGMNFQA 153
BLAST of mRNA_P-littoralis_Contig81.92.1 vs. uniprot
Match: A0A6H5K540_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K540_9PHAE) HSP 1 Score: 107 bits (268), Expect = 6.250e-25 Identity = 52/88 (59.09%), Postives = 62/88 (70.45%), Query Frame = 1
Query: 1 RQRRSWAAYSKPLLADGTFRSSFRMDHDDFMDLVDMLRPEMERNPHMGSLRNGAVPVEYQVGNTLRWFAGGQMLDIKQGHVIAKSTAY 264
R RR + Y KP+L D TF FRM++DDF LVD LRP +++N MG LRNGA+PVEYQV TLRW AGG + GHVIA+STAY
Sbjct: 52 RVRRPFETYIKPMLQDHTFSMRFRMEYDDFRVLVDHLRPALQKNEKMGLLRNGAIPVEYQVAMTLRWLAGGSTYECMDGHVIARSTAY 139
BLAST of mRNA_P-littoralis_Contig81.92.1 vs. uniprot
Match: A0A6H5JYU2_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYU2_9PHAE) HSP 1 Score: 105 bits (261), Expect = 4.960e-23 Identity = 50/94 (53.19%), Postives = 65/94 (69.15%), Query Frame = 1
Query: 238 HVIAKSTAYQTAVRVIKAINACEALECRWPEKQTDYDSIAAGFNSRSTNGVIAKCVGAMDGLFVRTLRPNSRDTHEPNSFYSGHKKGFGMNFQA 519
HVIA+STAY VI A+NAC + C+WPE + D A F +RS+ V+ KCVGAMDG FVR ++P++++ EPN +GHKKGFG NFQA
Sbjct: 4 HVIARSTAYHETSTVINALNACSEVNCKWPEGE-DAARAAELFRNRSSIDVVRKCVGAMDGFFVRMIKPSAKEVVEPNLCNNGHKKGFGTNFQA 96
BLAST of mRNA_P-littoralis_Contig81.92.1 vs. uniprot
Match: A0A6H5J9B3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9B3_9PHAE) HSP 1 Score: 94.4 bits (233), Expect = 1.150e-21 Identity = 46/83 (55.42%), Postives = 55/83 (66.27%), Query Frame = 1
Query: 139 MGSLRNGAVPVEYQVGNTLRWFAGGQMLDIKQGHVIAKSTAYQTAVRVIKAINACEALECRWPEKQTDYDSIAAGFNSRSTNG 387
MG LRNGA+PVEYQV TLRW AGG + + GHVIA+STAY VI A+NAC L C+WPE + D A F +RS+ G
Sbjct: 1 MGLLRNGAIPVEYQVAMTLRWLAGGSIYECMDGHVIARSTAYHVTSTVINALNACPELNCKWPEGE-DAAGAAELFRNRSSYG 82 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig81.92.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 12
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig81.92.1 >prot_P-littoralis_Contig81.92.1 ID=prot_P-littoralis_Contig81.92.1|Name=mRNA_P-littoralis_Contig81.92.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=173bp RQRRSWAAYSKPLLADGTFRSSFRMDHDDFMDLVDMLRPEMERNPHMGSLback to top mRNA from alignment at P-littoralis_Contig81:326521..327039+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig81.92.1 ID=mRNA_P-littoralis_Contig81.92.1|Name=mRNA_P-littoralis_Contig81.92.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=519bp|location=Sequence derived from alignment at P-littoralis_Contig81:326521..327039+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig81:326521..327039+ >mRNA_P-littoralis_Contig81.92.1 ID=mRNA_P-littoralis_Contig81.92.1|Name=mRNA_P-littoralis_Contig81.92.1|organism=Pylaiella littoralis U1_48|type=CDS|length=519bp|location=Sequence derived from alignment at P-littoralis_Contig81:326521..327039+ (Pylaiella littoralis U1_48)back to top |