mRNA_P-littoralis_Contig81.68.2 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig81.68.2 vs. uniprot
Match: D8LC96_ECTSI (Peroxisomal membrane protein PEX16 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LC96_ECTSI) HSP 1 Score: 533 bits (1372), Expect = 9.950e-182 Identity = 332/548 (60.58%), Postives = 365/548 (66.61%), Query Frame = 1
Query: 91 MEYQQQDPRFVKGGWSYAKFVRDNPTAAHTLARLLQYSGFFAPARFADRDLSIESGYALSSLANLAHARILLEGQGGPGQGAVGVEETYVGSAND-----------GQFPGSRTQLESKRREKLSSKAVLAERMRVALAVIAHVQVVVEKLAGQHGGPRRRRQAITYLETLKALSRLLLLACTREMVIGGGAYVPWAKPRSPPPRNRNKPGGPGGDGGRLWREVDLGGVGSHDPQPSASRAAGADLSPSLSRHPPEVYTGKRSGVKLIVPPRASVTWSGRGRSNRPIGSVGRAFNASSSSYSIDGSSSSSCPQRRCVVDEVFTCTSCQERSSDSDCRGFVHGNGGGRDASAGGPSEPANGCCGLSCVGGEWRSQRRACECVGSGGLARPGDGGELSQVWLMAGEAIHILRPLVYSYSYGLAGEGSWRQWLTSLGMDAAAYTCTARAGGG-GARSLLTSLGATSGRAGAGDGVLVLPYLDDEQAAELSRRKMLWFLYLMRSPAFELLAEPVSRGAAGVFEGVPLLGGMADYALNMLLYVQRHHFYTSAS 1698
ME QQ+DPR + GW YA FVR NPTAA T+ LL+YSGFFAPARFADRDLSIESGYALSSLA LAH +IL+ GQGG G G G + G+AND G PGS +L+ K RE+ SS V+A+RMRVALA+IA+VQ+VVEKLA QHGGPRRR+QAI YLETLKAL+RLLLLACTREMV+GGG+YV R+PP NRNK G WREVDL G + Q S D PS PPEVYTGKRSGVKLIVPPRASV WSGRGRSNR G A ASS S C R D VF + SS S RG +G G+ GG E A+ SCV WR +R A GG Q WLMAGE IHILRPL YSY GE SWR WL SLGMDAAA+ CTARAGG GA +LLT +G AG+ GV VLPYLD+EQAAEL RRKMLWFLYLMRSPAFELLAEPVSRGAAGVFEGVP+LGGMA YALNMLLYVQRHHFYTSAS
Sbjct: 1 MEQQQRDPRASEEGWCYANFVRHNPTAARTVETLLRYSGFFAPARFADRDLSIESGYALSSLAALAHDQILIHGQGG-GLGRGGQDG---GAANDDGLDGGQVHALGIAPGSSIRLDPKNRERPSSTTVVAQRMRVALAMIANVQIVVEKLAAQHGGPRRRQQAIVYLETLKALARLLLLACTREMVVGGGSYVSGGNRRTPPLGNRNKAG--------AWREVDLNGARLNQAQ---SSEFAVDRPPSPPCPPPEVYTGKRSGVKLIVPPRASVVWSGRGRSNRSGGVSRLAATASSPS----------CGSSRRSADGVFQ----NDSSSSSSFRGCANG---GQGIGTGGSMEAASD---ESCV---WRQRREA-------------QGG---QAWLMAGEVIHILRPLAYSYGCAATGERSWRPWLISLGMDAAAFACTARAGGSSGAMALLTPIG----EAGS-SGVPVLPYLDEEQAAELRRRKMLWFLYLMRSPAFELLAEPVSRGAAGVFEGVPILGGMAGYALNMLLYVQRHHFYTSAS 489
BLAST of mRNA_P-littoralis_Contig81.68.2 vs. uniprot
Match: A0A835Z8Q5_9STRA (Peroxisomal membrane protein-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8Q5_9STRA) HSP 1 Score: 221 bits (563), Expect = 8.300e-60 Identity = 181/528 (34.28%), Postives = 240/528 (45.45%), Query Frame = 1
Query: 139 YAKFVRDNPTAAHTLARLLQYSGFFAPARFADRDLSIESGYALSSLANLAHARILLEGQGGPGQGAVGVEETYVGSANDGQFPGSRTQLESKRREKLSSKAVLAERMRVALAVIAHVQVVVEKLAGQHGGPRRRRQAITYLETLKALSRLLLLACTREMVIGGGAYVPWAKPRSPPPRNRNKPGGPGGDGGRLWREVDLGGVGSHDPQPSASRAAGADLSPSLSRHPPEVYTGKRSGVKLIVPPRASVTWSGRGRSNRPIGSVGRAFNASSSSYSIDGSSSSSCPQRRCVVDEVFTCTSCQERSSDSDCRGFVHGNGGGRDASAGGPSEPANGCCGL---SCVGGEWRSQRRACECVGSGGLARPGDGGELSQ-----------------VWLMAGEAIHILRPLVYSYSYGLAGEGSWRQWLTSLGMDAAAYTCTARAGGGGARSLLTSLGATSGRAGAGDGVLVLPYLDDEQAAELSRRKMLWFLYLMRSPAFELLAEPVSRGAAGVFEGVPLLGGMADYALNMLL 1662
Y+ FV+ NP A+ L +L+YSGF APA+F +R+L +E+GYA SSLA L H I Q + G EE V + +R AL V+AH++VV EK+A GG RRRQ IT +E KA+ RL +LA TREM++ GG + P A PP R + G G R+ V G+G D A G P+ P +Y GKR G K +P RA R + G A+ S+ +++G SS+ + S +D G A CCGL +C GG G+G +A + GEL + WL+ GE +H +RP YS + G GE +W WL S+ +D A+ CTARA R G G+G + P EQ AEL RRK+ W LYL+R+PAFELL P + GAAG F GVP+LGG+A YAL MLL
Sbjct: 10 YSAFVKANPGTANLLESVLRYSGFLAPAQFGERELLVEAGYAASSLAGLLHDGINAPQQQHQQRSTGGHEEGVVAT------------------------------LRTALVVLAHIEVVAEKVAAASGGAVRRRQLITAIEVAKAVMRLTILALTREMLLAGGHHAPGA----PPLRGQTIAGRVGS---RVLSTV---GLGLED---RAENGTGHGPPPA-----PVMYQGKRCGRKYALPARAQA---------RHGSAPGLRLGANGSAPALNGCSSA-------------------QNGSHTDMYG-------------------AASCCGLQHAACGGGHGD---------GAGWMAEEDEDGELERHRRWLHAGRAPAPPPPKAWLLLGEGLHAIRPAAYSAACGRLGEAAWAPWLLSMSVDVASRACTARA--------------VEVRGGRGNGGALTP----EQRAELRRRKVQWVLYLLRTPAFELLLGPAATGAAGAFGGVPVLGGLASYALQMLL 415
BLAST of mRNA_P-littoralis_Contig81.68.2 vs. uniprot
Match: W7TST8_9STRA (Peroxisomal membrane protein PEX16 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TST8_9STRA) HSP 1 Score: 88.6 bits (218), Expect = 6.680e-15 Identity = 131/448 (29.24%), Postives = 180/448 (40.18%), Query Frame = 1
Query: 451 ERMRVALAVIAHVQVVVEKLAGQHGGPRRRRQAITYLETLKALSRLLLLACTREMVIGGGAYVPWAKPRSPPPRNRNKPGGPGGDGGR----LWREVDLGGVGSHDPQPSAS---RAAGA---------DLSPSLSRHPPEVYTGKRSGVKLIVPPRASVTWSGRGRSNRPIGSVGRAFNASSSSYSIDGSSSSSCPQRRCVVDEVFTCTSCQERSSDSDCRGFVHGNGGGRDASAGGPSEPANGCCGLSCVGGEWRSQRRACECVGSGGLARPGDGGELSQV---WLMAGEAIHILRPLVY-SYSYGLAGEGSWRQWLTSLGMDAAAYTCTARAG---GGGARSLLTSLGA---------TSGRAGAGDGVLVLPYLDDEQAAELSRRKMLWFLYLMRSPAFELLAEPVSRGAAGVFEGVPLLGGMADYALNMLLYVQRHHFYTSAS 1698
+R+ + L +I+H +V+ EK++ G + +LE LK L RL L++ ++ GG A V DGGR R V+ S P ++S + +GA D L P EV KR+ R W RGR GR F S SY+ D S+ R ++ ++ C + SS S G + PS P G C VG EW + R E++Q L+AGE +HILRPLV S + LA R+ + + A + R G SLL L A T+G GD L D EL RRK LW LYL+R+P FE L PV+R G +PL+GG+A Y+ L+Y+QRH TS S
Sbjct: 78 DRLGLTLLLISHTEVLAEKIS-MRLGDGTDHLVVLWLEALKVLLRLRLVSLQQQH--GGNANVVLL------------------DGGRAIPTFHRPVESARPSSSTPGETSSLGVKNSGATSGVEEDQEDEEVLLRVLPEEVARPKRAEC------REGQEWK-RGRR------TGRKFRYFSESYNGDDDYGSN----RHLIGDLTRCNARWTLSSPSPSSASSSTESGASTS----PSAPTTGDCEGVAVGIEWTREERP----------------EVAQARARLLLAGEILHILRPLVLASLRWALAR----RRRVKGRAVAAPPMGRSLRRGPLHSAAPESLLVLLPALMDLVSYQCTTGALNGGDNALKQSCED-----ELRRRKNLWLLYLLRTPVFEGLTHPVTRAVDGSLVRLPLVGGLASYSYQALIYIQRHFTLTSGS 458
BLAST of mRNA_P-littoralis_Contig81.68.2 vs. uniprot
Match: A0A7R9U860_9STRA (Peroxisomal membrane protein PEX16 n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U860_9STRA) HSP 1 Score: 83.2 bits (204), Expect = 1.570e-13 Identity = 60/177 (33.90%), Postives = 84/177 (47.46%), Query Frame = 1
Query: 1255 LMAGEAIHILRPLVYSYSYGLA----------GEG---SWRQWLTSLGMDAAAYTCTARAGGG-----------GARSLLTSLGATSGRAGAG----DGVLVLPYLD-DEQAAELSRRKMLWFLYLMRSPAFELLAEPVSRGAAGVFEGVPLLGGMADYALNMLLYVQRHHFYTSAS 1698
L+ GE +HILRP ++ L GEG S+ WL G + +G G RS + T R G G + L + EQ EL RRKM W LYL+RSP F+L+ EPV++ V PL+G +++YA+ +L+++Q HHFYTS S
Sbjct: 171 LLLGEILHILRPFLFCVIERLVLRRQLRRLGKGEGPPNSYGSWLLLAGSFWMDFLSDRSSGAALARREVDLLELGVRSAESLRSTTGPRTGTGILTREASLTRAMMRFAEQKEELRRRKMQWLLYLLRSPLFQLICEPVAKTTDKVLGRAPLIGSLSNYAMQLLMHIQSHHFYTSGS 347
BLAST of mRNA_P-littoralis_Contig81.68.2 vs. uniprot
Match: A0A1W0AC00_9STRA (Peroxisomal membrane protein PEX16 n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0AC00_9STRA) HSP 1 Score: 75.1 bits (183), Expect = 5.360e-11 Identity = 51/148 (34.46%), Postives = 70/148 (47.30%), Query Frame = 1
Query: 1258 MAGEAIHILRPLVYSYSYGLAGEGSWRQWLTSLGMDAAAYTCTARAGGGGARSLLTSLGATSGRAGAGDGVLVLPYLDDEQAAELSRRKMLWFLYLMRSPAFELLAEPVSRGAAGVFEGVPLLGGMADYAL-NMLLYVQRHHFYTSAS 1698
+AGE +HILRP++Y+ E SW +L S + C++ L S +D A EL RRKM LYL+R+P F +P++ A + VPLLG + +A+ N L Y QR HFYTSAS
Sbjct: 192 LAGEVLHILRPVIYAILCQRKTEQSWIPFLASFSTEILGIACSSAG--------LEHSNKLS--------------VDPLVAEELRRRKMCLLLYLLRNPFFSSATQPLADNVANATKPVPLLGRLLQFAIDNGLHYYQRRHFYTSAS 317
BLAST of mRNA_P-littoralis_Contig81.68.2 vs. uniprot
Match: A0A7R9XXJ3_9VIRI (Peroxisomal membrane protein PEX16 n=1 Tax=Prasinoderma coloniale TaxID=156133 RepID=A0A7R9XXJ3_9VIRI) HSP 1 Score: 70.9 bits (172), Expect = 1.480e-10 Identity = 53/179 (29.61%), Postives = 82/179 (45.81%), Query Frame = 1
Query: 1264 GEAIHILRPLVYSYSYGLAGEGSWRQWLTSLGMDAAAYTCTARAGGGGARSLLTSL----------GATSGRAGAGDG---------VLVLPYLD----------------DEQAAELSRRKMLWFLYLMRSPAFELLAEPVSRGAAGVFEGVPLLGGMADYALNMLLYVQRHHFYTSA 1695
GE ++I RP++Y+ G +W WL+SLG+D A+ R+ R + +L G+++ AGAG+G L L +D E+ AE RR+ L YL RSP F +LA+ EGVPLLG + + + + + Q ++FYTS+
Sbjct: 1 GEVLYITRPVLYALMLRRYGRTAWMPWLSSLGIDLASDALRVRS-----RQQIEALLRAVGHAGEDGSSASSAGAGEGEDKLAAAVKALTLADMDTATKAALVRALGHPQLQEERAETGRRRALLLYYLARSPIFNILAKRPLEAVGRSAEGVPLLGTIVSFLVEIAVGSQYYYFYTSS 174
BLAST of mRNA_P-littoralis_Contig81.68.2 vs. uniprot
Match: A0A8K1FKN1_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FKN1_PYTOL) HSP 1 Score: 69.3 bits (168), Expect = 6.430e-9 Identity = 52/149 (34.90%), Postives = 73/149 (48.99%), Query Frame = 1
Query: 1255 LMAGEAIHILRPLVYSYSYGLAGEGSWRQWLTSLGMDAAAYTCTARAGGGGARSLLTSLGATSGRAGAGDGVLVLPYLDDEQAAELSRRKMLWFLYLMRSPAFELLAEPVSRGAAGVFEGVPLLGGMADY-ALNMLLYVQRHHFYTSAS 1698
L+AGE +H+ RPLVY+ E SW L +L ++ + ++ SL S T LP Q ELS RKM LYL+R PA+ L +PV+ GV + VP+LG + ++ ++ Y R HFYTSAS
Sbjct: 236 LLAGEILHVFRPLVYAVLRQRRDENSWLPALVALAIEVSGLVLSST-------SLENSKLVTP---------TTLPQNKKAQE-ELSARKMQLLLYLLRDPAYVNLTKPVATTVCGVTDYVPVLGKVFRLVSIGLMDYYARFHFYTSAS 367
BLAST of mRNA_P-littoralis_Contig81.68.2 vs. uniprot
Match: D0MV74_PHYIT (Peroxisomal membrane protein PEX16 n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0MV74_PHYIT) HSP 1 Score: 62.0 bits (149), Expect = 1.610e-6 Identity = 47/150 (31.33%), Postives = 72/150 (48.00%), Query Frame = 1
Query: 1252 WLMAGEAIHILRPLVYSYSYGLAGEGSWRQWLTSLGMDAAAYTCTARAGGGGARSLLTSLGATSGRAGAGDGVLVLPYLDDEQAAELSRRKMLWFLYLMRSPAFELLAEPVSRGAAGVFEGVPLLGGMADYALNMLL-YVQRHHFYTSAS 1698
+L+AGEA HILRP+VY+ SW + SL ++ + +A A + SL +G D+ E++ RKM LYL+R P + + +P + AA V + VP +G + + +L Y + HFYTSAS
Sbjct: 257 FLVAGEACHILRPVVYALLRRRRPATSWTPVVVSLLVELSGLALSAAA-----VEPVESLKHDAG---------------DKAKDEIAARKMALLLYLLRDPVYATVTKPATGKAADVLDYVPGVGKLFRFGTRAVLDYYHQFHFYTSAS 386
BLAST of mRNA_P-littoralis_Contig81.68.2 vs. uniprot
Match: A0A6I9QDC5_ELAGV (Peroxisomal membrane protein PEX16 n=7 Tax=Arecaceae TaxID=4710 RepID=A0A6I9QDC5_ELAGV) HSP 1 Score: 61.6 bits (148), Expect = 1.950e-6 Identity = 49/162 (30.25%), Postives = 64/162 (39.51%), Query Frame = 1
Query: 1240 LSQVW---------LMAGEAIHILRPLVYSYSYGLAGEGSWRQWLTSLGMDAAAYTCTARAGGGGARSLLTSLGATSGRAGAGDGVLVLPYLDDEQAAELSRRKMLWFLYLMRSPAFELLAEPVSRGAAGVFEGVPLLGGMADYALNMLLYVQRHHFYTSAS 1698
LS +W + GEA+ ILRPL+Y G SW WL SL +D G G S TS G+ SG L + E RRK+ W LY+MR P F + VP +G + + +L Q + YTS S
Sbjct: 222 LSNIWSEKGLSGGLFVTGEALFILRPLIYVMFIRKYGIRSWTPWLISLAVDLT---------GMGVLSYATSQGSRSGDK--------FYQLSSSEKDEFKRRKLTWALYIMRDPFFAKYTKNRLEKTDKYLSQVPFIGFLTAKLIELLEGAQTRYTYTSGS 366
BLAST of mRNA_P-littoralis_Contig81.68.2 vs. uniprot
Match: A0A7S3FGG8_9VIRI (Peroxisomal membrane protein PEX16 n=1 Tax=Prasinoderma singulare TaxID=676789 RepID=A0A7S3FGG8_9VIRI) HSP 1 Score: 61.6 bits (148), Expect = 2.730e-6 Identity = 50/170 (29.41%), Postives = 74/170 (43.53%), Query Frame = 1
Query: 1261 AGEAIHILRPLVYSYSYGLAGEGSWRQWLTSLGMDAAAYTCTAR------------AGGGGARS---------LLTSLGATSGRAGAGDGVLVL----PYLDDEQAAELSRRKMLWFLYLMRSPAFELLAEPVSRGAAGVFEGVPLLGGMADYALNMLLYVQRHHFYTSA 1695
A E + ++RP+VY+ G +W WLTSLG+D + + AG GA + L A LV P L E+A E RR+ L YL RSP F+++A+ EG+PLLG + Y +++ + ++FYTSA
Sbjct: 297 AAEVLFVVRPVVYALMLRRYGRTTWLPWLTSLGIDLTSDSLRVHSRQRIEALLRLAAGAAGADQEGDESDSDEAIPKLAMRGMETDAAKAALVRALGHPQLQAERA-ETGRRRALLAYYLARSPVFDIIAKRPLEAVGRSAEGIPLLGTVVTYLVDIAVGSSYYYFYTSA 465 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig81.68.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 11
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig81.68.2 >prot_P-littoralis_Contig81.68.2 ID=prot_P-littoralis_Contig81.68.2|Name=mRNA_P-littoralis_Contig81.68.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=537bp MEYQQQDPRFVKGGWSYAKFVRDNPTAAHTLARLLQYSGFFAPARFADRDback to top mRNA from alignment at P-littoralis_Contig81:250535..255833+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig81.68.2 ID=mRNA_P-littoralis_Contig81.68.2|Name=mRNA_P-littoralis_Contig81.68.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=5299bp|location=Sequence derived from alignment at P-littoralis_Contig81:250535..255833+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig81:250535..255833+ >mRNA_P-littoralis_Contig81.68.2 ID=mRNA_P-littoralis_Contig81.68.2|Name=mRNA_P-littoralis_Contig81.68.2|organism=Pylaiella littoralis U1_48|type=CDS|length=1611bp|location=Sequence derived from alignment at P-littoralis_Contig81:250535..255833+ (Pylaiella littoralis U1_48)back to top |