mRNA_P-littoralis_Contig81.58.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig81.58.1
Unique NamemRNA_P-littoralis_Contig81.58.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig81.58.1 vs. uniprot
Match: D8LC94_ECTSI (SET domain and mariner transposase fusion n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC94_ECTSI)

HSP 1 Score: 360 bits (923), Expect = 2.120e-112
Identity = 201/337 (59.64%), Postives = 229/337 (67.95%), Query Frame = 1
Query:  196 MSLFDSLVGS--DATSVLLSYLRWREIVAVASTSTRIFFGTKRGQTERRLDLSCGVSPNPIPCDPPHCPPRVLQAAPSGVLSETAQGCKWNLGGPLPPSFTYLNEAIHTFDDVGDDFLEGCACFPQCDGQDGDGVDGRSLCPCVELNAAVQSGPAPLFECHAGCSCGPNCRLRATQRGGEGRGKKVPPTLRIRYMGRKGWGAYPVDAIPAGTFVADYTGEVLRVHEARKRVPAYDRDGLNYVLTTQEFFQGGKQVCQTIVDATTSGNVSRFFNHCCDPSLSVFV--IRR---GTFQRPRLAFYTRDRVEAGCELTYDYGAAGPAGGAVSQGGKRDLD 1185
            M L ++LV S  + TS LLS+L W + VA A TST +F   K    ++  D+SCG SP PIPCD  H P   +Q A  G  S ++Q  KW+LGGP+PPSF YLNEAIH FDD G D LEGCACF  C      GVD  +LCPCV+LN AVQSGPAPLFECH  C+CG  CRLRATQRG      KVPP LR+RYMG+KGWGAY V AI  GT+VADYTGEVL V EAR+RV AYDRDGLNYVLTTQEFFQGGKQV QTIVDATT GNVSRFFNH C+P+LSVFV  +RR   G F  PR   +T  R          + +AG + G    GG  D D
Sbjct:    1 MPLVEALVDSSCNTTSTLLSFLGWEDAVAFAITSTLLFVQVKAIIQKQCDDISCGSSPYPIPCDSAHRPLHGVQQATPGGSSHSSQSFKWSLGGPVPPSFMYLNEAIHAFDDSGADELEGCACFGGC------GVD-DTLCPCVQLNVAVQSGPAPLFECHTSCTCGIACRLRATQRGAA---SKVPPMLRLRYMGKKGWGAYSVGAIAGGTYVADYTGEVLPVPEARRRVHAYDRDGLNYVLTTQEFFQGGKQVFQTIVDATTCGNVSRFFNHSCEPTLSVFVAVVRRLHVGAFD-PRADSHTGLRSAV-------WKSAGGSKGPTHSGGGGDDD 319          
BLAST of mRNA_P-littoralis_Contig81.58.1 vs. uniprot
Match: L8GPN6_ACACA (SET domain containing protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GPN6_ACACA)

HSP 1 Score: 131 bits (330), Expect = 3.100e-31
Identity = 69/160 (43.12%), Postives = 92/160 (57.50%), Query Frame = 1
Query:  655 PLFECHAGCSCGPNCRLRATQRGGEGRGKKVPPTLRIRYMGRKGWGAYPVDAIPAGTFVADYTGEVLRVHEARKRV-PAYDRDGLNYVLTTQEFFQGGKQVCQTIVDATTSGNVSRFFNHCCDPSLSVFVIRRGTFQRPRLAFYTRDRVEAGCELTYDYG 1131
            PLFECH+ C C  +C  R  Q+G       +   L +     KGW    +  +  G FV++Y GEV+   EA++R    YDR GLNY+L  +EF        +T +D T  GNVSRFFNH CDP++ +F++R G+   PRLAF+    V AG ELTYDYG
Sbjct:   65 PLFECHSRCGCSADCASRVVQKG-------ITLPLEVFMSATKGWSVRVLSPVRKGQFVSEYAGEVVSTEEAQRRWRDEYDRAGLNYLLVVREFIPARGATLRTNIDGTRLGNVSRFFNHSCDPNMLLFLVRVGSLI-PRLAFFVCRDVAAGEELTYDYG 216          
BLAST of mRNA_P-littoralis_Contig81.58.1 vs. uniprot
Match: A0A7K8R1L4_9PASS (SETMR methyltransferase (Fragment) n=1 Tax=Smithornis capensis TaxID=363769 RepID=A0A7K8R1L4_9PASS)

HSP 1 Score: 127 bits (318), Expect = 1.780e-29
Identity = 79/203 (38.92%), Postives = 106/203 (52.22%), Query Frame = 1
Query:  541 LEGCAC------FPQCDGQ-DGDGVDGRSLCPCVELNAAVQSGPAPLFECHAGCSCGPNCRLRATQRGGEGRGKKVPPTLRIRYMGRKGWGAYPVDAIPAGTFVADYTGEVLRVHEARKRVPAYDRDGLNYVLTTQEFFQGGKQVCQTIVDATTSGNVSRFFNHCCDPSLSVFVIRRGTFQRPRLAFYTRDRVEAGCELTYDY 1128
            L GC+C       P+C     GD   G+ L         +Q G AP+FEC A C C  +CR R  Q G       +   L++     KGWG   ++AIP G+FV +Y GEVL V EAR+R+ A   +  NY+L  +E    G+ V +T VD T  GNV RF NH C+P+L +  +R  +   PRLA +    + AG EL YDY
Sbjct:   21 LPGCSCGSSSCVAPECPCLWRGDSSSGQCL-----RGTELQGGSAPVFECSALCRCSDSCRNRLVQGG-------LRLRLQVFQSRGKGWGVRTLEAIPRGSFVCEYAGEVLGVAEARRRILAQTPEDSNYILALREHLHDGR-VLETFVDPTHIGNVGRFLNHSCEPNLVMVPVRVHSMV-PRLALFAATDISAGEELCYDY 209          
BLAST of mRNA_P-littoralis_Contig81.58.1 vs. uniprot
Match: A0A1S3A6M4_ERIEU (histone-lysine N-methyltransferase SETMAR n=1 Tax=Erinaceus europaeus TaxID=9365 RepID=A0A1S3A6M4_ERIEU)

HSP 1 Score: 118 bits (295), Expect = 1.310e-25
Identity = 86/271 (31.73%), Postives = 123/271 (45.39%), Query Frame = 1
Query:  334 RLDLSCGVSPNPIPCDPPHCPPRVLQAAPSGVLSETAQGCKWNLGGPLPPSFTYLNEAIHTFDDVGDDFLE------GCACFPQCDGQDGDGVDGRSLCPCVELNAAVQSGPAPLFECHAGCSCGPNCRLRATQRGGEGRGKKVPPTLRIRYMGRKGWGAYPVDAIPAGTFVADYTGEVLRVHEARKRVPAYDRDGLNYVLTTQEFFQGGKQVCQTIVDATTSGNVSRFFNHCCDPSLSVFVIRRGTFQRPRLAFYTRDRVEAGCELTYDY 1128
            + D++ G+   P+   PP   P   Q +P  V    A      L  P                  G + LE       C+C      + GD  D  +LC  ++L++   +   P+FECHA C CG +CR R  QRG       +   L++     KGWG   +D IP G F+ +Y GE+L   EA++R         NY+   +E   GG QV +T VD    GNV RF NH C+P+L +  +R  +   PRLA +    +  G EL+YDY
Sbjct:   25 KFDIARGLENVPVSAWPPGAWPEPFQYSPDLVAGPGADSDPSQLSFP------------------GCECLERPCLPGSCSCL-----RHGDNYD-DNLC-LLDLDSTGATCARPVFECHALCPCGEDCRNRLVQRG-------LQVQLQVFQTDAKGWGLRTLDPIPRGRFICEYAGELLGSAEAQRRSGLQGLRDPNYIQAVREHASGG-QVLETFVDPARVGNVGRFLNHSCEPNLLMLPVRVHSMV-PRLALFAARDILPGEELSYDY 261          
BLAST of mRNA_P-littoralis_Contig81.58.1 vs. uniprot
Match: UPI001B3AAF11 (histone-lysine N-methyltransferase SETMAR n=1 Tax=Toxotes jaculatrix TaxID=941984 RepID=UPI001B3AAF11)

HSP 1 Score: 115 bits (287), Expect = 8.250e-25
Identity = 63/170 (37.06%), Postives = 89/170 (52.35%), Query Frame = 1
Query:  619 VELNAAVQSGPAPLFECHAGCSCGPNCRLRATQRGGEGRGKKVPPTLRIRYMGRKGWGAYPVDAIPAGTFVADYTGEVLRVHEARKRVPAYDRDGLNYVLTTQEFFQGGKQVCQTIVDATTSGNVSRFFNHCCDPSLSVFVIRRGTFQRPRLAFYTRDRVEAGCELTYDY 1128
            + L  A     +P+FECHA C+C   C  R  QRG       +   L +   G +GWG   ++AIP GTFV +Y GEV+   EAR+R      +  NY++  +E   G   + +T VD    GNV RF NH C P+L +  +R  +   PRLA +    ++A  ELT+DY
Sbjct:   89 LNLTRADSGYCSPVFECHALCTCSDTCSNRVVQRG-------LRLRLEVYCTGNRGWGVRTLEAIPQGTFVCEYAGEVISFEEARRRQLTQRSEDNNYIIAVREH-AGTGSIMETFVDPAVVGNVGRFLNHSCQPNLFMLPVRVHSVV-PRLALFAGRYIDAQEELTFDY 249          
BLAST of mRNA_P-littoralis_Contig81.58.1 vs. uniprot
Match: A0A8J4ZGR7_9CHEL (Histone-lysine N-methyltransferase SUV39H2 n=3 Tax=Nymphon striatum TaxID=424472 RepID=A0A8J4ZGR7_9CHEL)

HSP 1 Score: 117 bits (292), Expect = 6.200e-24
Identity = 81/230 (35.22%), Postives = 110/230 (47.83%), Query Frame = 1
Query:  478 PPSFTYLN-----EAIHTFDDVGDDFLEGCACFP------QCDGQDGDGVDGRSLCPCVELNAAVQSGPAPLFECHAGCSCGPNCRLRATQRGGEGRGKKVPPTLRIRYMGRKGWGAYPVDAIPAGTFVADYTGEVLRVHEARKRVPAYDRDGLNYVLTTQEFFQGGKQVCQTIVDATTSGNVSRFFNHCCDPSLSVFVIRRGTF--QRPRLAFYTRDRVEAGCELTYDY 1128
            P SF Y+N     E I     + DD L GC C         C G       G S          V +G +P++EC+  C+CGP C  R  Q G     +KV   +  R     GWG   ++AIP GTFV +Y GEV+   EA +R   YD +G  Y+      +  G   C   VDA   GN+S F NH CDP+L VF +   +   + PRLAF++   ++ G EL++DY
Sbjct:  353 PESFNYINDYKAGEGIS----IPDDPLVGCDCEDCYENRSNCCGHQ----SGSSFAYTKYKKLKVPAG-SPIYECNKRCACGPGCLNRVVQHG-----RKVKLAI-FRTSNLCGWGVKTLEAIPKGTFVMEYVGEVISEQEAERRGHKYDEEGRTYLFDLD--YDDGD--CPFTVDAAYQGNISHFMNHSCDPNLVVFGVWINSLDPRLPRLAFFSLRDIKRGEELSFDY 563          
BLAST of mRNA_P-littoralis_Contig81.58.1 vs. uniprot
Match: UPI00077FBC7C (histone-lysine N-methyltransferase SETMAR isoform X1 n=2 Tax=Parasteatoda tepidariorum TaxID=114398 RepID=UPI00077FBC7C)

HSP 1 Score: 112 bits (279), Expect = 6.560e-24
Identity = 69/234 (29.49%), Postives = 109/234 (46.58%), Query Frame = 1
Query:  475 LPPSFTYLNEAIHTFDDVGDDFLE---GCACFPQCDGQDGDGVDGRSLCPCVELNAAVQSGPA---------PLFECHAGCSCGPNCRLRATQRGGEGRGKKVPPTLRIRYMGRKGWGAYPVDAIPAGTFVADYTGEVLRVHEARKRVPAYDRDGLNYVLTTQEFFQGGKQVCQ-TIVDATTSGNVSRFFNHCCDPSLSVFVIRRGTFQRPRLAFYTRDRVEAGCELTYDYGAA 1137
            +PP  TY +  + T D   ++F      C C   C             C C +         A         P+ EC   CSC   C  R  Q+G       +  +L++     +G+G   ++ IP  +FV +Y GEV+ VHEA+KR+   + D +NY+   +E+    K+VC+ TI+D T  GN+ R+ NH C P+L    +R  +   P++ F+    ++   ELTYDYG +
Sbjct:   29 IPPMMTYTSSCVLTSDSCTEEFESVPLPCTCDDNC----------LKKCSCWDTEVYTNGKLAENYSNDFGKPIIECSNLCSCTEECSNRIVQQG-------ICFSLQVFMTMSRGFGVRTMEFIPKSSFVCEYAGEVIDVHEAKKRLAKQEFDCMNYIFVIREYCS--KEVCKRTIIDPTIVGNIGRYLNHSCSPNLISVPVRSNSMV-PKICFFANCDIDPLQELTYDYGGS 242          
BLAST of mRNA_P-littoralis_Contig81.58.1 vs. uniprot
Match: UPI00189F8CEF (histone-lysine N-methyltransferase SETMAR isoform X1 n=2 Tax=Sebastes umbrosus TaxID=72105 RepID=UPI00189F8CEF)

HSP 1 Score: 112 bits (280), Expect = 7.210e-24
Identity = 75/201 (37.31%), Postives = 102/201 (50.75%), Query Frame = 1
Query:  538 FLEGCACFPQCDGQDGDGVDGRSLCPCVELNAAVQSGPAPLFECHAGCSCGPNCRLRATQRGGEGRGKKVPPTLRIRYM----GRKGWGAYPVDAIPAGTFVADYTGEVLRVHEARKRVPAYDRDGLNYVLTTQEFFQGGKQVCQTIVDATTSGNVSRFFNHCCDPSLSVFVIRRGTFQRPRLAFYTRDRVEAGCELTYDY 1128
            F E C+C  Q  GQ  D     +L      N+   S   P+FEC+A C+C   C  R  QRG           LR+R +      +GWG   ++AIP GTFV +Y GEV+   EAR+R  A   +  NY++  +E   G   + +T VD  T GNV RF NH C P+L +  +R  +   PRLA +    V+A  ELT+DY
Sbjct:   65 FPENCSCL-QTHGQAYDSTG--TLLTLSRTNSGYCS---PVFECNALCTCSDACSNRVVQRG-----------LRLRLVVYGTENRGWGVRTLEAIPCGTFVCEYAGEVISFEEARRRQLAQRSEENNYIIAVREH-AGTGSITETFVDPATVGNVGRFLNHSCQPNLFMQPVRVHSVV-PRLALFAGRDVDAQEELTFDY 246          
BLAST of mRNA_P-littoralis_Contig81.58.1 vs. uniprot
Match: A0A5J5DJK1_9PERO (Uncharacterized protein n=5 Tax=Percidae TaxID=8165 RepID=A0A5J5DJK1_9PERO)

HSP 1 Score: 110 bits (276), Expect = 2.680e-23
Identity = 64/170 (37.65%), Postives = 90/170 (52.94%), Query Frame = 1
Query:  619 VELNAAVQSGPAPLFECHAGCSCGPNCRLRATQRGGEGRGKKVPPTLRIRYMGRKGWGAYPVDAIPAGTFVADYTGEVLRVHEARKRVPAYDRDGLNYVLTTQEFFQGGKQVCQTIVDATTSGNVSRFFNHCCDPSLSVFVIRRGTFQRPRLAFYTRDRVEAGCELTYDY 1128
            + LN       +PLFEC+A C+C   C  R  QRG       +   L +    ++GWG   ++AIP GTFV +Y GEV+   EAR+R  A   +  NY++  +E   G   V +T VD    GNV RF NH C P+L +  +R  +   PRLA +    ++A  ELT+DY
Sbjct:   93 LNLNKTNSGYCSPLFECNALCTCSDACSNRVVQRG-------LRLRLEVYSTEKRGWGVRTLEAIPHGTFVCEYAGEVISFEEARRRQRAQRSEDNNYIIGVREH-AGTGCVTETFVDPAMVGNVGRFLNHACQPNLFMQPVRVHSVV-PRLALFAGRNIDAQEELTFDY 253          
BLAST of mRNA_P-littoralis_Contig81.58.1 vs. uniprot
Match: A0A182TP51_9DIPT (Histone-lysine N-methyltransferase n=1 Tax=Anopheles melas TaxID=34690 RepID=A0A182TP51_9DIPT)

HSP 1 Score: 111 bits (278), Expect = 2.950e-23
Identity = 84/225 (37.33%), Postives = 111/225 (49.33%), Query Frame = 1
Query:  478 PPSFTYLNEAIHTFD-DVGDDFLEGCACFPQCDGQD---GDGVDGRSLCPCVELNAAVQSGPAPLFECHAGCSCGPNCRLRATQRGGEGRGKKVPPTLRIRYMGRKGWGAYPVDAIPAGTFVADYTGEVLRVHEARKRVPAYDRDGLNYVLTTQEFFQGGKQVCQTIVDATTSGNVSRFFNHCCDPSLSVFVIRRGTFQR--PRLAFYTRDRVEAGCELTYDYGA 1134
            P +FTYL   I      + +D   GC C P C G+    G   +GR     V+    +Q G AP+FEC+  CSCGP+C  R  Q GG     K   TL     GR GWG      I  G ++++Y GEV+   EA KR   YD  G  Y+      F G        +DA   GNV+RFFNH CDP+  ++ +         PRLAF+ + R+E G ELT++Y A
Sbjct:   66 PNNFTYLQGNIPAEGISIPNDPPVGCECNP-CTGRSTCCGKLSEGR-FAYSVKKRLLLQPG-APIFECNKKCSCGPDCLNRVVQNGG-----KCNLTLFKTPNGR-GWGVRTNTVIYEGQYISEYCGEVISYDEAEKRGREYDAVGRTYLFDLD--FNGTDN--PYTLDAARYGNVTRFFNHSCDPNCGIWSVWIDCLDPYLPRLAFFAQRRIEIGEELTFNYHA 277          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig81.58.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LC94_ECTSI2.120e-11259.64SET domain and mariner transposase fusion n=1 Tax=... [more]
L8GPN6_ACACA3.100e-3143.13SET domain containing protein n=1 Tax=Acanthamoeba... [more]
A0A7K8R1L4_9PASS1.780e-2938.92SETMR methyltransferase (Fragment) n=1 Tax=Smithor... [more]
A0A1S3A6M4_ERIEU1.310e-2531.73histone-lysine N-methyltransferase SETMAR n=1 Tax=... [more]
UPI001B3AAF118.250e-2537.06histone-lysine N-methyltransferase SETMAR n=1 Tax=... [more]
A0A8J4ZGR7_9CHEL6.200e-2435.22Histone-lysine N-methyltransferase SUV39H2 n=3 Tax... [more]
UPI00077FBC7C6.560e-2429.49histone-lysine N-methyltransferase SETMAR isoform ... [more]
UPI00189F8CEF7.210e-2437.31histone-lysine N-methyltransferase SETMAR isoform ... [more]
A0A5J5DJK1_9PERO2.680e-2337.65Uncharacterized protein n=5 Tax=Percidae TaxID=816... [more]
A0A182TP51_9DIPT2.950e-2337.33Histone-lysine N-methyltransferase n=1 Tax=Anophel... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig81contigP-littoralis_Contig81:225100..228442 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LC94
PFAMsLin-8,Pre-SET,SAD_SRA,SET
Model size1712
Max annot lvl2759|Eukaryota
KEGG rclassRC00003,RC00060,RC00181,RC00496
KEGG koko:K11419,ko:K11433
KEGG ReactionR03875,R03938,R04866,R04867
KEGG Pathwayko00310,map00310
Hectar predicted targeting categoryother localisation
GOsGO:0000228,GO:0000785,GO:0000790,GO:0000792,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005694,GO:0005720,GO:0031974,GO:0031981,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044446,GO:0044454,GO:0044464,GO:0070013
Exons4
Evalue3.93e-115
EggNOG OGsCOG2940@1|root,KOG1082@2759|Eukaryota
Ec32 ortholog descriptionSET domain protein
Ec32 orthologEc-14_005625.1
EC2.1.1.43
DescriptionHistone-lysine N-methyltransferase
Cds size1299
COG categoryZ
BRITEko00000,ko00001,ko01000,ko03036
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig81.58.1prot_P-littoralis_Contig81.58.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig81 225318..228247 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791660.4479094-UTR-P-littoralis_Contig81:225099..2253171680791660.4479094-UTR-P-littoralis_Contig81:225099..225317Pylaiella littoralis U1_48UTRP-littoralis_Contig81 225100..225317 -
1680791660.5103219-UTR-P-littoralis_Contig81:228247..2284421680791660.5103219-UTR-P-littoralis_Contig81:228247..228442Pylaiella littoralis U1_48UTRP-littoralis_Contig81 228248..228442 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791660.4599686-CDS-P-littoralis_Contig81:225317..2257701680791660.4599686-CDS-P-littoralis_Contig81:225317..225770Pylaiella littoralis U1_48CDSP-littoralis_Contig81 225318..225770 -
1680791660.4748065-CDS-P-littoralis_Contig81:226591..2266901680791660.4748065-CDS-P-littoralis_Contig81:226591..226690Pylaiella littoralis U1_48CDSP-littoralis_Contig81 226592..226690 -
1680791660.4854012-CDS-P-littoralis_Contig81:227083..2273811680791660.4854012-CDS-P-littoralis_Contig81:227083..227381Pylaiella littoralis U1_48CDSP-littoralis_Contig81 227084..227381 -
1680791660.495295-CDS-P-littoralis_Contig81:227798..2282471680791660.495295-CDS-P-littoralis_Contig81:227798..228247Pylaiella littoralis U1_48CDSP-littoralis_Contig81 227799..228247 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig81.58.1

>prot_P-littoralis_Contig81.58.1 ID=prot_P-littoralis_Contig81.58.1|Name=mRNA_P-littoralis_Contig81.58.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=433bp
MSLFDSLVGSDATSVLLSYLRWREIVAVASTSTRIFFGTKRGQTERRLDL
SCGVSPNPIPCDPPHCPPRVLQAAPSGVLSETAQGCKWNLGGPLPPSFTY
LNEAIHTFDDVGDDFLEGCACFPQCDGQDGDGVDGRSLCPCVELNAAVQS
GPAPLFECHAGCSCGPNCRLRATQRGGEGRGKKVPPTLRIRYMGRKGWGA
YPVDAIPAGTFVADYTGEVLRVHEARKRVPAYDRDGLNYVLTTQEFFQGG
KQVCQTIVDATTSGNVSRFFNHCCDPSLSVFVIRRGTFQRPRLAFYTRDR
VEAGCELTYDYGAAGPAGGAVSQGGKRDLDSSSPQQQPVCKTPRRPRRSE
SFEPVEGGGPGNKSSPHGNENLSHGEQGEKMDEQETAGIAGDSEGLWKSD
DTHYQQEMSIRRPCLCGSRCCRGLLPCNRAIL*
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mRNA from alignment at P-littoralis_Contig81:225100..228442-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig81.58.1 ID=mRNA_P-littoralis_Contig81.58.1|Name=mRNA_P-littoralis_Contig81.58.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=3343bp|location=Sequence derived from alignment at P-littoralis_Contig81:225100..228442- (Pylaiella littoralis U1_48)
GGGGAATAAGATGTGTGGGGGGTGCTCGTAGCTCTTTCAGCCTTTTGCTG AATAGAATACATTGTATACGAATTAAGAAAGACTGGACTGCTCTGCAGTC GAAGTCGTCCGTTTCGAAAATGGTGTGTATGTTCACAGAAACCAATAGCC GTAGCACACGGTTGTGAAGATACGGCACGGAGTAGACACGACTGGATGTC GTTATTCGATTCGCTTGTCGGTTCTGACGCGACTTCAGTCCTTCTGTCCT ATCTTAGATGGCGTGAAATAGTCGCCGTTGCGTCGACATCGACACGCATA TTCTTCGGGACCAAGAGAGGACAGACCGAAAGGCGATTAGATTTATCATG TGGGGTTAGCCCCAACCCGATACCTTGTGACCCTCCGCACTGTCCACCGC GTGTGTTGCAAGCAGCGCCATCAGGAGTTTTGTCAGAAACAGCTCAAGGT TGCAAATGGAACCTCGGTGGACCTCTGCCGCCCAGCTTCACGTATCTCAA CGAAGCGATCCACACGTTCGATGATGTCGGGGACGATTTTTTAGAGGGTT GTGCGTGTTTCCCCCAGTGTGACGGCCAAGATGGGGATGGCGTGGATGGC AGGAGCCTCTGTCCGTGCGTAGAGCTGAACGCAGCCGTGCAGAGGTGAGA ACGAAGTATCCTTTACTCACTGCTGTAATTCCGATTATCTGTACGTTTAC GTCAAGCGTCTTTGTACGATGCGATGATGTTATCTTTTCGGCCGATTGAC GTCCGAGGGACGCATCCGTGTCATTTCACCCTCTCGCTACTTCAATTATA CAAATTGACGTCGACGTCCGAGGGACGCATCCGTGTCATTTCACCCTCTC GCTACTTCAATTATACAAAGTATGATAGGTATGTAATTCAACAGGAGCGG TGCACAACAGCAGCTGTCTTCGTCCGCCACGCCTTGTATGCGATCCCGCA CACTTTCGTGCTGTACCGAGTGGTATGCCCCACAACCTTCATCCCCTCCT ACTTCTTCATCCCCTCGTCTCTTTAACGGTCTGCTCTCTCTACTTGTATC CGCCCTCGAAGTGGTCCTGCGCCGCTTTTCGAGTGTCATGCTGGTTGCTC TTGCGGCCCCAATTGTCGATTAAGAGCCACCCAGAGAGGAGGAGAAGGGA GAGGGAAGAAGGTGCCCCCGACACTTAGAATTCGCTACATGGGAAGAAAG GGGTGGGGTGCATATCCTGTCGACGCCATACCTGCAGGGACGTTCGTGGC GGACTACACCGGCGAGGTGCTCCGGGTACACGAAGCGAGAAAGAGGGTGC CCGCGTACGATCGCGATGGCTTGAACTACGTCTTGACCACCCAGGAGTTC TTCCAAGGGGTGCGTACCGCATGACAACATCCGTACCGCCAGTGTTGCGA TCCCTGCTGGTCTCGCAGGAATCTTGAGGATGATTATTTTTCAGGAGTTA TTTTCGTCATCCTGCTGTGTTTGATGCTCCGGCGTTCGTGAGCGCGGTCG ATCGTCCCTACGTGTGCTTGGCTTGTAGTGATCTGAAAGTGCTTCACTCC GCAAGAGCTCGGCACTTTTGAGACCATTAGGACGAGCGTAAGACAGAAAC CGCAAAGTATTTCCATGAAGAAGGTCGAGCACAATCAATGGACTGCTGCA TATTGTGTGTGGATGTTTCGGGGGGTTCCCTGTCATTGTTCTTCCAACTA CCTTTGACCCTCATCATATGTGTACAAACATTTCGTTCAACTCTACGCGC AGGGAAAGCAGGTGTGCCAGACCATCGTCGATGCCACAACGTCTGGGAAC GTGTCGAGGTTTTTTAACCACTGTTGCGACCCTAGCCTGTCCGTGTTTGT GGTGAGCGAGGGTCAGGATCGGGTTGATCTTTAGCTTGCAGTGTACGCGG TGTGTGCAGATTGTTGTGCTGAATGCGAACCTATCGCACAACGGATCAGG GCTATCGGCACTACATTGCCGATCATCCAACCTGTGGCCAGAGATATGCG AGGCCGAGTCGCCATCAACTAGAATGTTTAATCCGCGCCCACATGCTCCA ACAAGGTTCAAGGCTCATGTGTGCGGTGACGGGAGAACACGGGGGGCGGG GAAGAGTTACTGCGCTCCCCCCGTGCTGCAACGGCCATCTTCAAAACTGG GCTCGTCTTAACCCCCACCAATAGTCTGAGAACGTCCTTCACAGACATGC CATGCGGGTGGAGTGTAAAGACCGCCGACCACCAGCTCGGTTTCTACTTG GGGAATGGTTCTTACATGAGGAAAACGACGGGGTCGATACGAACGCTCAA GGTTGACGTAATCATCATCGAAGAAGCTGCTTATATGCCTCTCCAGACCT TAAGCATGATCCTGGCTGCTGCCCATAGCAGCGGCACCCACGTGATAAGG ACATACGATACGCACCAACTCCAACCCGTGTGCGAAAGCAGCGGCATGTC AATTAGCAAGGACAACGTCGACAGGGATTTTTTGCCCGTTCTTTGGAACG GTCCTAAAGTGATTGGCCAATCAATTAATTGCGGCATGTAGATAACGCAT TTCACTCGAGTTTGGTGTATCATCTGCTTTGCCCACCACCAGTGCACGTT TACGTTCGTTTTTCTTTCTTGTCGCGTTCGCTCCGCGTTCACACGGTGCC CGCGTTGATTGACTTCGTGCAGATCCGACGAGGCACATTCCAACGACCCC GCCTGGCTTTTTACACTAGAGATCGCGTGGAGGCAGGCTGCGAACTGACC TACGACTACGGAGCTGCAGGTCCGGCGGGTGGGGCCGTCTCACAAGGCGG CAAGCGCGATCTCGACAGCAGCAGTCCGCAGCAGCAGCCGGTGTGCAAGA CACCACGAAGGCCACGAAGAAGCGAAAGTTTCGAACCCGTGGAAGGCGGT GGACCTGGAAATAAATCTTCACCCCACGGAAATGAAAACTTGTCCCACGG CGAACAAGGGGAGAAGATGGACGAGCAGGAGACGGCGGGAATCGCGGGTG ATTCTGAAGGCCTTTGGAAATCTGACGACACGCACTATCAGCAGGAGATG TCTATACGGCGACCGTGTTTGTGTGGCTCGCGGTGCTGTCGTGGTCTCTT GCCCTGTAATCGAGCCATCCTTTAGAATGGTACATAGGTGACATATTTTT CGGGAGGACTGGGCGAATAAGTTCCAAATAGTGGACAGAGCGTGCCCGTC CTAAGAAGCAGACGTTCCGAGTAAGCCAGGAGGGACTTCAAGCAGCTTTG CTTTTGATTTGCTTGGGTATTGGCGTGGAGGGCGCTGGTGATACCTGTTC GGTTTGCCCCGCGGTACGGGTGAGACGGTGCGGTGCAACCCCA
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Coding sequence (CDS) from alignment at P-littoralis_Contig81:225100..228442-

>mRNA_P-littoralis_Contig81.58.1 ID=mRNA_P-littoralis_Contig81.58.1|Name=mRNA_P-littoralis_Contig81.58.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1299bp|location=Sequence derived from alignment at P-littoralis_Contig81:225100..228442- (Pylaiella littoralis U1_48)
ATGTCGTTATTCGATTCGCTTGTCGGTTCTGACGCGACTTCAGTCCTTCT
GTCCTATCTTAGATGGCGTGAAATAGTCGCCGTTGCGTCGACATCGACAC
GCATATTCTTCGGGACCAAGAGAGGACAGACCGAAAGGCGATTAGATTTA
TCATGTGGGGTTAGCCCCAACCCGATACCTTGTGACCCTCCGCACTGTCC
ACCGCGTGTGTTGCAAGCAGCGCCATCAGGAGTTTTGTCAGAAACAGCTC
AAGGTTGCAAATGGAACCTCGGTGGACCTCTGCCGCCCAGCTTCACGTAT
CTCAACGAAGCGATCCACACGTTCGATGATGTCGGGGACGATTTTTTAGA
GGGTTGTGCGTGTTTCCCCCAGTGTGACGGCCAAGATGGGGATGGCGTGG
ATGGCAGGAGCCTCTGTCCGTGCGTAGAGCTGAACGCAGCCGTGCAGAGT
GGTCCTGCGCCGCTTTTCGAGTGTCATGCTGGTTGCTCTTGCGGCCCCAA
TTGTCGATTAAGAGCCACCCAGAGAGGAGGAGAAGGGAGAGGGAAGAAGG
TGCCCCCGACACTTAGAATTCGCTACATGGGAAGAAAGGGGTGGGGTGCA
TATCCTGTCGACGCCATACCTGCAGGGACGTTCGTGGCGGACTACACCGG
CGAGGTGCTCCGGGTACACGAAGCGAGAAAGAGGGTGCCCGCGTACGATC
GCGATGGCTTGAACTACGTCTTGACCACCCAGGAGTTCTTCCAAGGGGGA
AAGCAGGTGTGCCAGACCATCGTCGATGCCACAACGTCTGGGAACGTGTC
GAGGTTTTTTAACCACTGTTGCGACCCTAGCCTGTCCGTGTTTGTGATCC
GACGAGGCACATTCCAACGACCCCGCCTGGCTTTTTACACTAGAGATCGC
GTGGAGGCAGGCTGCGAACTGACCTACGACTACGGAGCTGCAGGTCCGGC
GGGTGGGGCCGTCTCACAAGGCGGCAAGCGCGATCTCGACAGCAGCAGTC
CGCAGCAGCAGCCGGTGTGCAAGACACCACGAAGGCCACGAAGAAGCGAA
AGTTTCGAACCCGTGGAAGGCGGTGGACCTGGAAATAAATCTTCACCCCA
CGGAAATGAAAACTTGTCCCACGGCGAACAAGGGGAGAAGATGGACGAGC
AGGAGACGGCGGGAATCGCGGGTGATTCTGAAGGCCTTTGGAAATCTGAC
GACACGCACTATCAGCAGGAGATGTCTATACGGCGACCGTGTTTGTGTGG
CTCGCGGTGCTGTCGTGGTCTCTTGCCCTGTAATCGAGCCATCCTTTAG
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