prot_P-littoralis_Contig12.61.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig12.61.1
Unique Nameprot_P-littoralis_Contig12.61.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length380
Homology
BLAST of mRNA_P-littoralis_Contig12.61.1 vs. uniprot
Match: D8LAT5_ECTSI (Calmodulin 2 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LAT5_ECTSI)

HSP 1 Score: 191 bits (486), Expect = 2.380e-56
Identity = 112/209 (53.59%), Postives = 124/209 (59.33%), Query Frame = 0
Query:  171 FTTIAASLGLKTTREKLREDFEKVVLSNRLVESSPGDPWVGAHDTERLVIGFTYKIFRRYYLDKIQGDLLEVNIRQAWEDLHHGTGSKVFSLPGPSPGIGFDAPEEAASSAMVPSGRRGERQEDRRHYHXXXXXXXXXXXXXXXXXXXXPDHGRGRPYVARAELQKILTREGEALTDEEVDQLLRECRPDEEGRIVYEGYRRMLIDPSL 379
             TT    + L++T         KVV SN LV++SPGDPW+GA DTER V+ FTYK+FRRYYL KIQG+LLEVNIRQAWEDLH GT                       +S     GR     + R                            RGRPYVARAELQKILTREGEALTDEEVD+LLRECRPDE GRIVYEGYRRMLIDPSL
Sbjct:   13 ITTRDCRIRLRSTAHVWSCLQRKVVRSNGLVDTSPGDPWLGADDTERPVVAFTYKVFRRYYLAKIQGELLEVNIRQAWEDLHQGT----------------------ETSGGGDGGRHYRHHQQR------------------GDSDIGGGDSRGRPYVARAELQKILTREGEALTDEEVDELLRECRPDEVGRIVYEGYRRMLIDPSL 181          
BLAST of mRNA_P-littoralis_Contig12.61.1 vs. uniprot
Match: A0A7S2S2F4_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S2F4_9STRA)

HSP 1 Score: 64.7 bits (156), Expect = 3.020e-8
Identity = 27/54 (50.00%), Postives = 40/54 (74.07%), Query Frame = 0
Query:  325 GRPYVARAELQKILTREGEALTDEEVDQLLRECRPDEEGRIVYEGYRRMLIDPS 378
            G  Y+ + +L +++T+ G+ LTDEE  +++REC PDEEGRI +E YR MLID +
Sbjct:  192 GEEYITKDKLFEVMTKHGDKLTDEEAAEMIRECNPDEEGRIFFEKYRTMLIDTT 245          
BLAST of mRNA_P-littoralis_Contig12.61.1 vs. uniprot
Match: UPI0007EE2F04 (LOW QUALITY PROTEIN: calmodulin-like protein 3 n=1 Tax=Oryctolagus cuniculus TaxID=9986 RepID=UPI0007EE2F04)

HSP 1 Score: 52.4 bits (124), Expect = 5.560e-5
Identity = 23/51 (45.10%), Postives = 37/51 (72.55%), Query Frame = 0
Query:  325 GRPYVARAELQKILTREGEALTDEEVDQLLRECRPDEEGRIVYEGYRRMLI 375
            G  YV+ AEL+ ++TR GE L+DE+VD+++R    D +G++ YE + RML+
Sbjct:   62 GNGYVSAAELRHVMTRLGEKLSDEKVDEMIRSANTDGDGQVNYEEFVRMLV 112          
BLAST of mRNA_P-littoralis_Contig12.61.1 vs. uniprot
Match: UPI00193F3D22 (neo-calmodulin-like n=1 Tax=Mauremys reevesii TaxID=260615 RepID=UPI00193F3D22)

HSP 1 Score: 53.5 bits (127), Expect = 7.040e-5
Identity = 24/47 (51.06%), Postives = 36/47 (76.60%), Query Frame = 0
Query:  328 YVARAELQKILTREGEALTDEEVDQLLRECRPDEEGRIVYEGYRRML 374
            Y++ AEL++I+T  GE LTDEEVD+L++E   D +GR+ YE + RM+
Sbjct:  125 YISVAELRQIMTNLGEKLTDEEVDELIKEADADRDGRVNYEAFVRMM 171          
BLAST of mRNA_P-littoralis_Contig12.61.1 vs. uniprot
Match: A0A670JEP2_PODMU (Calmodulin-A-like n=1 Tax=Podarcis muralis TaxID=64176 RepID=A0A670JEP2_PODMU)

HSP 1 Score: 52.8 bits (125), Expect = 8.410e-5
Identity = 23/52 (44.23%), Postives = 38/52 (73.08%), Query Frame = 0
Query:  325 GRPYVARAELQKILTREGEALTDEEVDQLLRECRPDEEGRIVYEGYRRMLID 376
            G  Y++ AEL+ +LT  GE LTDEEVD++++E   D +GR+ YE + R++++
Sbjct:   97 GNGYISTAELRHVLTNLGEKLTDEEVDEMIKEADVDGDGRVNYEEFVRVMME 148          
BLAST of mRNA_P-littoralis_Contig12.61.1 vs. uniprot
Match: A0A6F9B9H4_9TELE (EF-hand domain-containing protein n=1 Tax=Coregonus sp. 'balchen' TaxID=861768 RepID=A0A6F9B9H4_9TELE)

HSP 1 Score: 50.8 bits (120), Expect = 9.300e-5
Identity = 24/55 (43.64%), Postives = 37/55 (67.27%), Query Frame = 0
Query:  325 GRPYVARAELQKILTREGEALTDEEVDQLLRECRPDEEGRIVYEGYRRMLIDPSL 379
            G  Y++ AEL+ ++T  GE LTDEEVD+++RE   D +G++ YEG    L+  +L
Sbjct:   26 GNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEGQFPHLLSLTL 80          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig12.61.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D8LAT5_ECTSI2.380e-5653.59Calmodulin 2 n=1 Tax=Ectocarpus siliculosus TaxID=... [more]
A0A7S2S2F4_9STRA3.020e-850.00Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
UPI0007EE2F045.560e-545.10LOW QUALITY PROTEIN: calmodulin-like protein 3 n=1... [more]
UPI00193F3D227.040e-551.06neo-calmodulin-like n=1 Tax=Mauremys reevesii TaxI... [more]
A0A670JEP2_PODMU8.410e-544.23Calmodulin-A-like n=1 Tax=Podarcis muralis TaxID=6... [more]
A0A6F9B9H4_9TELE9.300e-543.64EF-hand domain-containing protein n=1 Tax=Coregonu... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 298..318
NoneNo IPR availableGENE3D1.10.238.10coord: 162..376
e-value: 3.2E-8
score: 35.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 287..301
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 262..331
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 302..316
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 145..165
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 62..126
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 78..126
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 62..77
IPR011992EF-hand domain pairSUPERFAMILY47473EF-handcoord: 325..374

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig12contigP-littoralis_Contig12:277439..282883 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig12.61.1mRNA_P-littoralis_Contig12.61.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig12 277410..283448 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig12.61.1 ID=prot_P-littoralis_Contig12.61.1|Name=mRNA_P-littoralis_Contig12.61.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=380bp
MPCVGTFIRFVTLLQPPAQLELWTLHWCTMDGRSGAKEKCRPVDDYDDKV
YYGDGDDGLAEEYDDYDYSYGDEKEEEDESFVVQHNDVEDDERKAPRSGY
TDRPHDDHRRPNVESEDGHDTGIKLSDKDEHRLLGAFLLAADGGLDGSRS
GDGGGEEPQLPTDGPTCLKKFTTIAASLGLKTTREKLREDFEKVVLSNRL
VESSPGDPWVGAHDTERLVIGFTYKIFRRYYLDKIQGDLLEVNIRQAWED
LHHGTGSKVFSLPGPSPGIGFDAPEEAASSAMVPSGRRGERQEDRRHYHR
QQQQQQQQQQQQQQHQDQDPDHGRGRPYVARAELQKILTREGEALTDEEV
DQLLRECRPDEEGRIVYEGYRRMLIDPSL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011992EF-hand-dom_pair