mRNA_P-littoralis_Contig81.43.3 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig81.43.3
Unique NamemRNA_P-littoralis_Contig81.43.3
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig81.43.3 vs. uniprot
Match: D8LCB5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LCB5_ECTSI)

HSP 1 Score: 641 bits (1654), Expect = 1.830e-229
Identity = 305/343 (88.92%), Postives = 324/343 (94.46%), Query Frame = 1
Query:   10 MDGFEIPVVDLSAWVEGERGNDKDCQNLAHALHAFGIVLVRDPRVSEVDNDQFLDQMEKYYAQSDGIKDARPEWSYQVGVTPEGTERPRGHCERISRLPDGHRPLTLCPPEADPKWRFFWTIGPRPAATKYRSLNAPPVVPEGFENWSAIMDAWGNKMIGALETVSRLCAIGLDLEEDALSSLMHEGPHLLAPTGSDFGKFNSVGTVLAGYHYDFNLLTIHGKSRYPGLSVWLRDGRKMPVSVPDGCLLVQAGKQLERLTGGHVLAGFHEVAVSEATIEAMRKRKEAGRSLWRISSTCFGHVASDQVLQPLGKFATEEALAEYPPITAGDMMQEELKAINLAA 1038
            M+ FEIPVVDLS WV G +GN  DC+ LA ALHAFGIVLVRDPRVSEVDN+QFLDQMEKYYAQSDG+KDARPE+SYQVGVTPEGTERPR HCERIS+LPDGHRPLTLCPPEADPKWRFFWTIGPRPA TKY+ LN PPVVPEGFENWS IMDAWGNKMIGALETVSRLCAIGL L+E+A+S+LMHEGPHLLAPTGS+F KF+S GTVLAGYHYDFNLLTIHGKSRYPGLSVWLRDGRKMPVSVPDGCLLVQAGKQLERLTGGHVLAGFHEVAVS+ATIE MRKRK+ G+SLWRISSTCFGHVASDQVL+PLGKFATEEALA+YP ITAGDMMQEELKAINLAA
Sbjct:    1 METFEIPVVDLSGWVGGAQGNGDDCRKLAEALHAFGIVLVRDPRVSEVDNNQFLDQMEKYYAQSDGVKDARPEFSYQVGVTPEGTERPRAHCERISQLPDGHRPLTLCPPEADPKWRFFWTIGPRPAVTKYQQLNPPPVVPEGFENWSTIMDAWGNKMIGALETVSRLCAIGLGLDEEAISTLMHEGPHLLAPTGSNFDKFDSAGTVLAGYHYDFNLLTIHGKSRYPGLSVWLRDGRKMPVSVPDGCLLVQAGKQLERLTGGHVLAGFHEVAVSQATIETMRKRKQEGQSLWRISSTCFGHVASDQVLRPLGKFATEEALAQYPSITAGDMMQEELKAINLAA 343          
BLAST of mRNA_P-littoralis_Contig81.43.3 vs. uniprot
Match: A0A7S2S0B3_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S0B3_9STRA)

HSP 1 Score: 424 bits (1091), Expect = 4.270e-143
Identity = 196/345 (56.81%), Postives = 254/345 (73.62%), Query Frame = 1
Query:    7 TMDGFEIPVVDLSAWVEGERGND---KDCQNLAHALHAFGIVLVRDPRVSEVDNDQFLDQMEKYYAQSDGIKDARPEWSYQVGVTPEGTERPRGHCERISRLPDGHRPLTLCPPEADPKWRFFWTIGPRPAATKYRSLNAPPVVPEGFENWSAIMDAWGNKMIGALETVSRLCAIGLDLEEDALSSLMHEGPHLLAPTGSDFGKFNSVGTVLAGYHYDFNLLTIHGKSRYPGLSVWLRDGRKMPVSVPDGCLLVQAGKQLERLTGGHVLAGFHEVAVSEATIEAMRKRKEAGRSLWRISSTCFGHVASDQVLQPLGKFATEEALAEYPPITAGDMMQEELKAINL 1032
            T    ++PV+DL  ++  ++  +   ++   +A ALH FG  + +DPRV E  N QFLD +E+Y++ SDG  DARPE S+QVGVTPE TE+PR HC R       ++P+T+CPP ADPKWRFFW IGP+P +TKY  LNA PV+P+ F  W  +M+ WGNKM+ AL+T++ + A GLDL       +M  GPHLLAPTGSDF K+N V T LAG+HYD N LTIHGKSR+PGL VWLRDGR++PV VP+G L+VQAGKQ+E LTGGHVLAGFHEV VSEAT++ + KR+  G++LWR+SST FGH+ASD  L+PLG+F T EA A++P I AG  +Q+EL+AI L
Sbjct:   43 TASVSDLPVIDLKYYLNRDKYPEEAKREIAKVAEALHKFGCFVAKDPRVEEKHNSQFLDMLERYFSSSDGKTDARPELSFQVGVTPEMTEQPRNHCSRAKSFDKENKPVTICPPGADPKWRFFWRIGPQPKSTKYPGLNADPVIPDEFPEWHGVMNMWGNKMLAALDTLAGMAAEGLDLPPTTFQDMMSFGPHLLAPTGSDFSKYNQVDTALAGFHYDLNFLTIHGKSRFPGLYVWLRDGRRVPVKVPEGHLIVQAGKQIEYLTGGHVLAGFHEVVVSEATVKTIEKRRAEGKALWRVSSTLFGHIASDHSLRPLGRFDTPEARAQFPAIDAGQQVQKELEAIAL 387          
BLAST of mRNA_P-littoralis_Contig81.43.3 vs. uniprot
Match: A0A835ZA03_9STRA (2OG-FeII_Oxy domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZA03_9STRA)

HSP 1 Score: 417 bits (1072), Expect = 3.040e-141
Identity = 195/317 (61.51%), Postives = 240/317 (75.71%), Query Frame = 1
Query:   94 AHALHAFGIVLVRDPRVSEVDNDQFLDQMEKYYAQSDGIKDARPEWSYQVGVTPEGTERPRGHCERISRLPDGHRPLTLCPPEADPKWRFFWTIGPRPAATKYRSLNAPPVVPEG--FENWSAIMDAWGNKMIGALETVSRLCAIGLDLEEDALSSLMHEGPHLLAPTGSDFGKFNSVGTVLAGYHYDFNLLTIHGKSRYPGLSVWLRDGRKMPVSVPDGCLLVQAGKQLERLTGGHVLAGFHEVAVSEATIEAMRKRKEAGRSLWRISSTCFGHVASDQVLQPLGKFATEEALAEYPPITAGDMMQEELKAINLAA 1038
            A +LH +G+VLVRDP V E DN  F+D ME+YY QSDG+ DARPE SYQVGVTP G E PR HC+ ++ +P   RP T+CPPEADPKWRFFW +G RP+ T++  LNA PV+P+   F +WS  MD WG  ++ +L +V+ + A+GL L  DA SS M  GPHLLAPTGSD  K   +GTVLAGYH D N LTIHGKSR+PGL +WLRDGRK  V+VP+G LLVQAGKQLE LT GH++AGFHEV V+EAT++A+ +RK AG S WR+SSTCFGH+ASDQ L+PL +F  E   A YPPI AG+ +QEEL+AI+L A
Sbjct:    8 ADSLHRYGVVLVRDPDVREEDNAAFIDMMERYYEQSDGVTDARPELSYQVGVTPGGVEVPRDHCDAVTAMPASARPATVCPPEADPKWRFFWRVGKRPSVTQFPELNAEPVMPDPKQFPDWSHKMDRWGGMVLTSLTSVAEMLAVGLKLPADAFSSRMKSGPHLLAPTGSDLAKHGQLGTVLAGYHTDLNFLTIHGKSRFPGLHIWLRDGRKCSVAVPNGALLVQAGKQLEHLTAGHIMAGFHEVCVTEATLKAIEQRKAAGGSTWRVSSTCFGHIASDQTLEPLERFQNEPLAASYPPIKAGEQVQEELRAISLRA 324          
BLAST of mRNA_P-littoralis_Contig81.43.3 vs. uniprot
Match: A0A7S0XDN5_9STRA (Hypothetical protein n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0XDN5_9STRA)

HSP 1 Score: 414 bits (1065), Expect = 3.750e-140
Identity = 183/318 (57.55%), Postives = 249/318 (78.30%), Query Frame = 1
Query:   79 DCQNLAHALHAFGIVLVRDPRVSEVDNDQFLDQMEKYYAQSDGIKDARPEWSYQVGVTPEGTERPRGHCERISRLPDGHRPLTLCPPEADPKWRFFWTIGPRPAATKYRSLNAPPVVPEGFENWSAIMDAWGNKMIGALETVSRLCAIGLDLEEDALSSLMHEGPHLLAPTGSDFGKFNSVGTVLAGYHYDFNLLTIHGKSRYPGLSVWLRDGRKMPVSVPDGCLLVQAGKQLERLTGGHVLAGFHEVAVSEATIEAMRKRKEAGRSLWRISSTCFGHVASDQVLQPLGKFATEEALAEYPPITAGDMMQEELKAINL 1032
            +C+ +A A H +G+ +V+DPRV+E +N  FL+ ME+Y+ QS+GI DARP+ SYQVGVTPE TE+PR +C +I  +    +PL+ CPPE DPKWRFFW +G  P +TK++ LNA PV+P+ F  W+ +M+ WGNKM+ AL T++ + A+G ++ +D+ +SLM +GPHLLAPTGSDF K+  + TVLAGYH D N LTIHGKSR+PGL +W R+G+K+ V+VPDGCLLVQAGKQ+E LTGG++LAGFHEV VSE+T++ +++RK   +SLWR+SSTCFGH+ SDQ+LQPL  F T EA  ++PP   GD++QEEL AI+L
Sbjct:   13 ECKKVAEAFHKYGVCIVKDPRVNESNNSTFLNMMEQYFEQSNGIDDARPDLSYQVGVTPERTEKPRDYCSKIGSIGPDDKPLSPCPPELDPKWRFFWRVGEPPKSTKFKQLNAEPVIPKNFPQWTEVMNMWGNKMLDALLTIAEMAAVGFNIPKDSFTSLMADGPHLLAPTGSDFNKYGQLNTVLAGYHTDLNFLTIHGKSRFPGLRLWTREGKKVNVAVPDGCLLVQAGKQIEYLTGGYILAGFHEVIVSESTVKVIQQRKANNQSLWRVSSTCFGHIQSDQLLQPLPPFDTPEAKEKFPPKFTGDLVQEELLAISL 330          
BLAST of mRNA_P-littoralis_Contig81.43.3 vs. uniprot
Match: A0A421GPG4_9STRA (2OG-FeII_Oxy domain-containing protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A421GPG4_9STRA)

HSP 1 Score: 410 bits (1053), Expect = 4.010e-138
Identity = 192/339 (56.64%), Postives = 248/339 (73.16%), Query Frame = 1
Query:   19 FEIPVVDLSAW-VEGERGNDKDCQNLAHALHAFGIVLVRDPRVSEVDNDQFLDQMEKYYAQSDGIKDARPEWSYQVGVTPEGTERPRGHCERISRLPDGHRPLTLCPPEADPKWRFFWTIGPRPAATKYRSLNAPPVVPEGFENWSAIMDAWGNKMIGALETVSRLCAIGLDLEEDALSSLMHEGPHLLAPTGSDFGKFNSVGTVLAGYHYDFNLLTIHGKSRYPGLSVWLRDGRKMPVSVPDGCLLVQAGKQLERLTGGHVLAGFHEVAVSEATIEAMRKRKEAGRSLWRISSTCFGHVASDQVLQPLGKFATEEALAEYPPITAGDMMQEELKAINL 1032
             EIPV+DL  + + G++    +C+  A +LH FG++ VRD R ++ DND FLD ME+Y+  +D  +DARP++ YQVGVTPE  ER R HC R + L   + P+TLCPPEAD K RFFW +G RP  T+++ LNA PV+P+ F  W +IMD WG KM+ A+  +  + A+GL LE+DAL   +  GPHLLAPTGS+F  FN +  VLA YHYD NLLTIHGKSR+PGL +WLRDG +  V +PDGCLLVQAGKQ+E LTGG+V AGFHEV V++ TIE + +RK AG+SLWR+SST F H ASD+ L+PLG+FAT +ALA+YPPI AG+ + EEL  I L
Sbjct:    2 LEIPVIDLKHYKITGDKA---ECEKAAESLHKFGVLCVRDERAADHDNDTFLDMMERYFESTDFEEDARPQYHYQVGVTPERKERARDHCARAATLDKRYAPVTLCPPEADKKSRFFWRVGGRPVDTQFKELNAEPVIPKNFPEWGSIMDMWGGKMLNAITDLVEIVAVGLGLEKDALVDRIKNGPHLLAPTGSNFNVFNQLNDVLAAYHYDLNLLTIHGKSRFPGLYIWLRDGTRTAVKIPDGCLLVQAGKQMEYLTGGYVQAGFHEVVVADTTIEKIEQRKIAGKSLWRVSSTLFSHTASDKTLEPLGRFATPDALAKYPPILAGNQVLEELSQIEL 337          
BLAST of mRNA_P-littoralis_Contig81.43.3 vs. uniprot
Match: A0A8K1FF67_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FF67_PYTOL)

HSP 1 Score: 409 bits (1052), Expect = 5.690e-138
Identity = 193/338 (57.10%), Postives = 246/338 (72.78%), Query Frame = 1
Query:   19 FEIPVVDLSAWVEGERGNDKDCQNLAHALHAFGIVLVRDPRVSEVDNDQFLDQMEKYYAQSDGIKDARPEWSYQVGVTPEGTERPRGHCERISRLPDGHRPLTLCPPEADPKWRFFWTIGPRPAATKYRSLNAPPVVPEGFENWSAIMDAWGNKMIGALETVSRLCAIGLDLEEDALSSLMHEGPHLLAPTGSDFGKFNSVGTVLAGYHYDFNLLTIHGKSRYPGLSVWLRDGRKMPVSVPDGCLLVQAGKQLERLTGGHVLAGFHEVAVSEATIEAMRKRKEAGRSLWRISSTCFGHVASDQVLQPLGKFATEEALAEYPPITAGDMMQEELKAINL 1032
             E+PV+DL  ++    G++  C+ +A  LH +G++ +RD R +E DND FL  ME+Y+  +D ++DARPE+ YQVGVTPE  ER R HC R + L   + P+TLCPPE D K RFFW IG RP  TK+  LNA PVVP+ F  W ++M+ WG KM+ A+  +  + A+GL LE+DAL   +   PHLLAPTGS+F  FN++  VLAGYHYD NLLTIHGKSR+PGL VWLRDG +  V +PDGCLLVQAGKQ+E LTGG+++AGFHEV VSEAT + + +RK AG+SLWR+SST F H ASD  L+PLG FATEEAL++YPPI AGD +  ELK I L
Sbjct:    2 IELPVIDLQQYLA--TGDEALCKQVAECLHKYGVLCLRDERATEQDNDTFLSMMERYFEATDFVEDARPEFHYQVGVTPELKERARDHCARAATLDKENAPVTLCPPELDKKSRFFWRIGERPQNTKFAELNAEPVVPKAFPEWESVMNMWGGKMLAAIGVLVEMAAVGLGLEKDALVKRIQNAPHLLAPTGSNFNSFNTLNDVLAGYHYDLNLLTIHGKSRFPGLYVWLRDGTRTAVKIPDGCLLVQAGKQIEYLTGGYLVAGFHEVIVSEATQKTIEERKAAGKSLWRVSSTLFSHTASDVTLEPLGHFATEEALSKYPPILAGDQVLAELKHIEL 337          
BLAST of mRNA_P-littoralis_Contig81.43.3 vs. uniprot
Match: A0A5D6YAR2_9STRA (2OG-FeII_Oxy domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YAR2_9STRA)

HSP 1 Score: 409 bits (1050), Expect = 1.140e-137
Identity = 194/338 (57.40%), Postives = 242/338 (71.60%), Query Frame = 1
Query:   19 FEIPVVDLSAWVEGERGNDKDCQNLAHALHAFGIVLVRDPRVSEVDNDQFLDQMEKYYAQSDGIKDARPEWSYQVGVTPEGTERPRGHCERISRLPDGHRPLTLCPPEADPKWRFFWTIGPRPAATKYRSLNAPPVVPEGFENWSAIMDAWGNKMIGALETVSRLCAIGLDLEEDALSSLMHEGPHLLAPTGSDFGKFNSVGTVLAGYHYDFNLLTIHGKSRYPGLSVWLRDGRKMPVSVPDGCLLVQAGKQLERLTGGHVLAGFHEVAVSEATIEAMRKRKEAGRSLWRISSTCFGHVASDQVLQPLGKFATEEALAEYPPITAGDMMQEELKAINL 1032
             E+PV+DL  +     G+  +C   A +LH +G++ +RD R  + DND FLD ME+Y+  +D + DARPE  YQVGVTPE  E  R HC R   LP  H P++LCPPEAD K RFFW IG RPA T++  LNA PVVP  F  W+A+M+ WG KM+ A+  +  L A+GL LE+DAL++ +  GPHLLAPTGS+F +FN++  VLA YHYD NLLTIHGKSR+PGL +WLRDG +  V +PDGCLLVQAGKQ+E LTGG+V AGFHEV VSEAT+ A+  RK AG+SLWR+SST F H  SD  L+PLG+FAT EA A+YPPI AGD +  EL  I L
Sbjct:    2 IELPVIDLQHYKR--TGDQAECVKAAESLHKYGVLCLRDERAKDADNDTFLDMMERYFETTDFVADARPELHYQVGVTPELKELARNHCARAEALPREHAPVSLCPPEADKKSRFFWRIGARPAQTQFDELNAEPVVPAAFPEWAAVMNMWGGKMMDAVRDLVELVALGLGLEKDALATRLQYGPHLLAPTGSNFARFNALNDVLASYHYDLNLLTIHGKSRFPGLFIWLRDGTRTAVKIPDGCLLVQAGKQMEYLTGGYVQAGFHEVVVSEATLAAIADRKAAGKSLWRVSSTLFSHSGSDTTLEPLGRFATPEAAAKYPPILAGDQVLAELAHIEL 337          
BLAST of mRNA_P-littoralis_Contig81.43.3 vs. uniprot
Match: A0A7S3MHZ8_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3MHZ8_9STRA)

HSP 1 Score: 410 bits (1055), Expect = 1.240e-137
Identity = 189/341 (55.43%), Postives = 249/341 (73.02%), Query Frame = 1
Query:   19 FEIPVVDLSAWVEGERGND---KDCQNLAHALHAFGIVLVRDPRVSEVDNDQFLDQMEKYYAQSDGIKDARPEWSYQVGVTPEGTERPRGHCERISRLPDGHRPLTLCPPEADPKWRFFWTIGPRPAATKYRSLNAPPVVPEGFENWSAIMDAWGNKMIGALETVSRLCAIGLDLEEDALSSLMHEGPHLLAPTGSDFGKFNSVGTVLAGYHYDFNLLTIHGKSRYPGLSVWLRDGRKMPVSVPDGCLLVQAGKQLERLTGGHVLAGFHEVAVSEATIEAMRKRKEAGRSLWRISSTCFGHVASDQVLQPLGKFATEEALAEYPPITAGDMMQEELKAINL 1032
              +PVV+LS +   ++  +   ++C+ +AHALH +G+V+++DPRV+E DND+F+D MEKY+  SDG++DARPE+ YQVGVT E  E PR HC+ +      ++PL+ CPPE DPKWRFFW  GP+P  T++ + N   V+P  F  W  +MD WG++M  AL T++ + A+G  +  DA +S M  GPHLLAPTGSDF KF   GTVLAG+HYD N LTIHGKSR+PGL VW R+G +  VSVPDGCLLVQAGKQ+E LTGGHVLAGFHEV V+++T + +  +K  G SLWR+SSTCFGH+ASDQVLQPL  F + EA+ ++P I AG+ +  ELKAI L
Sbjct:   58 LSLPVVELSTFFNKDKDPESYRRECEKVAHALHHYGLVVLKDPRVAEADNDRFVDMMEKYFEGSDGLRDARPEYGYQVGVTKERVELPRNHCKAMGAYGPDNKPLSPCPPEKDPKWRFFWRTGPQPETTEFPAENMDAVIPVEFPEWKEVMDGWGSQMTRALFTLAEMAAVGFKMPSDAFTSRMMYGPHLLAPTGSDFNKFGQEGTVLAGFHYDLNFLTIHGKSRFPGLYVWTREGVRTAVSVPDGCLLVQAGKQIEYLTGGHVLAGFHEVLVNKSTSKVIEAKKAKGESLWRVSSTCFGHIASDQVLQPLAPFNSPEAVEKFPAIKAGNQVIAELKAIAL 398          
BLAST of mRNA_P-littoralis_Contig81.43.3 vs. uniprot
Match: H3GBW1_PHYRM (2OG-FeII_Oxy domain-containing protein n=21 Tax=Phytophthora TaxID=4783 RepID=H3GBW1_PHYRM)

HSP 1 Score: 407 bits (1047), Expect = 3.250e-137
Identity = 188/340 (55.29%), Postives = 246/340 (72.35%), Query Frame = 1
Query:   19 FEIPVVDLSAWVEGERGNDKDCQNLAHALHAFGIVLVRDPRVSEVDNDQFLDQMEKYYAQSDGIKDARPEWSYQVGVTPEGTERPRGHCERISRLPDGHRPLTLCPPEADPKWRFFWTIGPRPAATKYRSLNAPPVVPEGFENWSAIMDAWGNKMIGALETVSRLCAIGLDLEEDALSSLMHEGPHLLAPTGSDFGKFNSVGTVLAGYHYDFNLLTIHGKSRYPGLSVWLRDGRKMPVSVPDGCLLVQAGKQLERLTGGHVLAGFHEVAVSEATIEAMRKRKEAGRSLWRISSTCFGHVASDQVLQPLGKFATEEALAEYPPITAGDMMQEELKAINLAA 1038
             EIPV+DL  +     G+  +C+  A +LH FG++ VRD R ++ DND FLD ME+Y+  +D ++DARPE+ YQVGVTPE  ER R HC R   L   + P++LCPPEAD K RFFW +G RP +T +  LNA PV+P+ F  W  +M+ WG KM+ A+  +  + A+GLDL+++AL   +  GPHLLAPTGS+F  FN +  VLA YHYD NLLTIHGKSR+PGL +WLRDG +  V +PDGCLLVQAGKQ+E LTGG+V AGFHEV V+E+T+E + +RK AG+SLWR+SST F H ASD+ L+PLG+FAT E++A+YPPI AG  + EEL  I L +
Sbjct:    2 LEIPVIDLKHYKA--TGDKTECEKAAESLHKFGVLCVRDERAADNDNDTFLDMMEQYFESTDFVEDARPEYHYQVGVTPERKERARNHCARAETLDKRYAPVSLCPPEADKKSRFFWRVGERPVSTNFEELNAEPVIPKTFPEWENVMNMWGGKMLDAITDLVEIVALGLDLKKEALVDRIKYGPHLLAPTGSNFNVFNQLNDVLAAYHYDLNLLTIHGKSRFPGLYIWLRDGTRTAVKIPDGCLLVQAGKQMEYLTGGYVQAGFHEVVVAESTLETIAQRKNAGKSLWRVSSTLFSHTASDKTLEPLGRFATPESMAKYPPILAGSQVLEELSKIELGS 339          
BLAST of mRNA_P-littoralis_Contig81.43.3 vs. uniprot
Match: K3WGK9_GLOUD (2OG-FeII_Oxy domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WGK9_GLOUD)

HSP 1 Score: 407 bits (1047), Expect = 3.250e-137
Identity = 190/338 (56.21%), Postives = 241/338 (71.30%), Query Frame = 1
Query:   19 FEIPVVDLSAWVEGERGNDKDCQNLAHALHAFGIVLVRDPRVSEVDNDQFLDQMEKYYAQSDGIKDARPEWSYQVGVTPEGTERPRGHCERISRLPDGHRPLTLCPPEADPKWRFFWTIGPRPAATKYRSLNAPPVVPEGFENWSAIMDAWGNKMIGALETVSRLCAIGLDLEEDALSSLMHEGPHLLAPTGSDFGKFNSVGTVLAGYHYDFNLLTIHGKSRYPGLSVWLRDGRKMPVSVPDGCLLVQAGKQLERLTGGHVLAGFHEVAVSEATIEAMRKRKEAGRSLWRISSTCFGHVASDQVLQPLGKFATEEALAEYPPITAGDMMQEELKAINL 1032
             E+PVVDL  +     G+  +C   A +LH +G++ +RD R ++ DND FLD ME+Y+  +D + DARP+  YQVGVTPE  E  R HC R   LP  H P+++CPPEAD K RFFW IG RP  TK+ +LNA PV+P+ F  W  +M+ WGNKM+ A++ ++ + AIGL LE+DALS  +  GPHLLAPTGS+FG+FN +  VLA YHYD NLLTIHGKSR+PGL +WLRDG +  V +PDGCLLVQAGKQ+E LTGG++ AGFHEV VSEAT+  +  RK AG+SLWR+SST F H  SD  L+PLG FA  E+ A+YPPI AGD +  EL  I L
Sbjct:    2 IELPVVDLKHYKL--TGDKAECAKAAESLHKYGVLCLRDERAADSDNDTFLDMMERYFETTDFVADARPDLHYQVGVTPELKENARNHCARAVTLPKEHAPVSICPPEADKKSRFFWRIGERPTVTKFAALNAEPVIPKDFPEWETVMNMWGNKMLDAIKDLAEMAAIGLGLEKDALSQRLEYGPHLLAPTGSNFGRFNQLNDVLASYHYDLNLLTIHGKSRFPGLFIWLRDGTRTAVKIPDGCLLVQAGKQIEYLTGGYIQAGFHEVIVSEATLATIEARKAAGKSLWRVSSTLFSHSGSDTTLEPLGHFANPESTAKYPPILAGDQVLAELNQIEL 337          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig81.43.3 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LCB5_ECTSI1.830e-22988.92Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S2S0B3_9STRA4.270e-14356.81Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A835ZA03_9STRA3.040e-14161.512OG-FeII_Oxy domain-containing protein n=1 Tax=Tri... [more]
A0A7S0XDN5_9STRA3.750e-14057.55Hypothetical protein n=1 Tax=Chromulina nebulosa T... [more]
A0A421GPG4_9STRA4.010e-13856.642OG-FeII_Oxy domain-containing protein n=3 Tax=Phy... [more]
A0A8K1FF67_PYTOL5.690e-13857.10Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A5D6YAR2_9STRA1.140e-13757.402OG-FeII_Oxy domain-containing protein n=1 Tax=Pyt... [more]
A0A7S3MHZ8_9STRA1.240e-13755.43Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
H3GBW1_PHYRM3.250e-13755.292OG-FeII_Oxy domain-containing protein n=21 Tax=Ph... [more]
K3WGK9_GLOUD3.250e-13756.212OG-FeII_Oxy domain-containing protein n=1 Tax=Glo... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig81contigP-littoralis_Contig81:168703..177072 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LCB5
PFAMs2OG-FeII_Oxy,DIOX_N
Model size1430
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons9
Evalue2.39e-232
EggNOG OGsCOG3491@1|root,2QR0G@2759|Eukaryota
Ec32 ortholog descriptionIsopenicillin N synthase-like
Ec32 orthologEc-14_005370.1
Descriptiondioxygenase activity
Cds size1032
COG categoryS
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig81.43.3prot_P-littoralis_Contig81.43.3Pylaiella littoralis U1_48polypeptideP-littoralis_Contig81 168712..176683 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791659.437636-UTR-P-littoralis_Contig81:168702..1687111680791659.437636-UTR-P-littoralis_Contig81:168702..168711Pylaiella littoralis U1_48UTRP-littoralis_Contig81 168703..168711 +
1680791659.5727618-UTR-P-littoralis_Contig81:176683..1770721680791659.5727618-UTR-P-littoralis_Contig81:176683..177072Pylaiella littoralis U1_48UTRP-littoralis_Contig81 176684..177072 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791659.4597633-CDS-P-littoralis_Contig81:168711..1688101680791659.4597633-CDS-P-littoralis_Contig81:168711..168810Pylaiella littoralis U1_48CDSP-littoralis_Contig81 168712..168810 +
1680791659.478261-CDS-P-littoralis_Contig81:172106..1722261680791659.478261-CDS-P-littoralis_Contig81:172106..172226Pylaiella littoralis U1_48CDSP-littoralis_Contig81 172107..172226 +
1680791659.4879928-CDS-P-littoralis_Contig81:172950..1730971680791659.4879928-CDS-P-littoralis_Contig81:172950..173097Pylaiella littoralis U1_48CDSP-littoralis_Contig81 172951..173097 +
1680791659.49879-CDS-P-littoralis_Contig81:173882..1739871680791659.49879-CDS-P-littoralis_Contig81:173882..173987Pylaiella littoralis U1_48CDSP-littoralis_Contig81 173883..173987 +
1680791659.5103352-CDS-P-littoralis_Contig81:174381..1744931680791659.5103352-CDS-P-littoralis_Contig81:174381..174493Pylaiella littoralis U1_48CDSP-littoralis_Contig81 174382..174493 +
1680791659.524638-CDS-P-littoralis_Contig81:174855..1749821680791659.524638-CDS-P-littoralis_Contig81:174855..174982Pylaiella littoralis U1_48CDSP-littoralis_Contig81 174856..174982 +
1680791659.53804-CDS-P-littoralis_Contig81:175312..1754121680791659.53804-CDS-P-littoralis_Contig81:175312..175412Pylaiella littoralis U1_48CDSP-littoralis_Contig81 175313..175412 +
1680791659.5502024-CDS-P-littoralis_Contig81:176013..1761211680791659.5502024-CDS-P-littoralis_Contig81:176013..176121Pylaiella littoralis U1_48CDSP-littoralis_Contig81 176014..176121 +
1680791659.5621932-CDS-P-littoralis_Contig81:176569..1766831680791659.5621932-CDS-P-littoralis_Contig81:176569..176683Pylaiella littoralis U1_48CDSP-littoralis_Contig81 176570..176683 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig81.43.3

>prot_P-littoralis_Contig81.43.3 ID=prot_P-littoralis_Contig81.43.3|Name=mRNA_P-littoralis_Contig81.43.3|organism=Pylaiella littoralis U1_48|type=polypeptide|length=344bp
MDGFEIPVVDLSAWVEGERGNDKDCQNLAHALHAFGIVLVRDPRVSEVDN
DQFLDQMEKYYAQSDGIKDARPEWSYQVGVTPEGTERPRGHCERISRLPD
GHRPLTLCPPEADPKWRFFWTIGPRPAATKYRSLNAPPVVPEGFENWSAI
MDAWGNKMIGALETVSRLCAIGLDLEEDALSSLMHEGPHLLAPTGSDFGK
FNSVGTVLAGYHYDFNLLTIHGKSRYPGLSVWLRDGRKMPVSVPDGCLLV
QAGKQLERLTGGHVLAGFHEVAVSEATIEAMRKRKEAGRSLWRISSTCFG
HVASDQVLQPLGKFATEEALAEYPPITAGDMMQEELKAINLAA*
back to top

mRNA from alignment at P-littoralis_Contig81:168703..177072+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig81.43.3 ID=mRNA_P-littoralis_Contig81.43.3|Name=mRNA_P-littoralis_Contig81.43.3|organism=Pylaiella littoralis U1_48|type=mRNA|length=8370bp|location=Sequence derived from alignment at P-littoralis_Contig81:168703..177072+ (Pylaiella littoralis U1_48)
ACTCGTACGATGGACGGATTCGAGATACCTGTCGTCGATCTCTCCGCGTG GGTGGAGGGAGAACGCGGAAATGATAAAGACTGCCAGAACTTGGCGCATG CTCTGCATGTGAGCGAATACCGGTACAGCAGTTTGTCACAGTTTTTTTTA CAAACAAGTTTTTTTTTTTTTAATATGCCGCACAACGGACAACACAACAA CCCAGGCGATGGCACCCACAATACAACATGTTACAGCCGCAACGCTGCAC ACAGCTGTACTCACGTCGAATCACAACAGCCTTCTCGATAAACACATGCC GTATTTGAACGCTGTACAGCCGCACCCCCCCCCCCCCTCCCACCCTGCCG AGTAATGCGTATCTCATCGCAGCCGTTCCCTTCGCTCCCCCGGCAAGGTA TGCTGTTGGGCATTACCCTTGAGCGGGTTGAGGGGGTCTTTCTGGCGGGT GTAAGGTCGGACTTACCCTCAAGGTGTGATCCCTTCTGGCTTCTACGCTG TGGTCGGATGCCTACGGACGTGGCGGTAGAGTTGGGTCGTTTTGGTTCGC CAGGCATACATGTGACGATTCGCGGGCCTCGTTTGGTTACCGAGTACAAC AGCGATGTATGCTCCATCAAAACTATTTGTGCGCGGAGGCAGTCGGCACC TTGGGCGAAAAGACGGAGCGGTCTAAGATGGAGAGAGAGAGACTTGCTGT CCAGCAGCCAGATTCGCCTCCAAAGCTGGAGGGAGACGAGCGGCGACGAA CGGGGATACTTTCGAAGCACAAGTTTACAGTATTTTTATTTTTATCTACC ACACAACCTACCACTACTGCTGCATGCGCTGCTGGGAACAACGCATCACC GGCTCCTGCTGCGGGCCATTGGATACCGCCGCATACGTGGCACCTACCGA TCGGTTTCATATACCGAAGCGCCCGGAAAGACCCGGCGAGCCAATGTATT TCAAGCGATTTTCCGGCAAAGGCGACTTCTATTCGCGGGAGCCCTGGCTA GACAAGACGACGGGCGACTTCCGAAGCGGCTGATGTTCGGGAACCTCGTA GGGGGTGAGGACCCAGGCACAGGCCGTCCGGCGCAAAACTGGTGAAGATT GTTTGAGGACGATTTAAAAGCTTTCGGAGCCACGGACGGTTCGACGGATG ACAGGCGCCCCACTCTTGGAATCGGCACCGCCCTGTGGGCTACGACCGCG AAGGAGAATAAGGGAGTGCCGTGGTACGCGGGGGTGGTCAAGGGGGCTGC GCGGTTTATGGCCGCTTGGCACAAGGAGGAGAAGGAGGCAAGCAGGAAAC GTGCAGGAAAGCGAATCGAGAGATAATTCAGCGTAACCAAGGAGAGAACC GCGAAGGAGAAGGGAGAGGGGGAAGCTCGAGGAAGCAAGCGCTGAAAGAC CCGGAAGGATGAGACCACGGCGACAGAGGAGAGCAAGAGGGGACTGATGG AAAGAGTAGCACGGCATATGCACCAGATTGATTGACACTGCTGTGATAGC TCTAACCTTTTCTACCCTTTGCCCCCCGCAGCAGTGCGCCCCCCCCTGTT GTGTTACCGTGGCCTGCGTTATTACGAACCTCGAAGTGTTACTTTTATGT CTTAAGCCCTTCTGCCTTTTGCCCTTTCACGTCTGCTTGTATTGCCTGAA ATTGTCGCTGGGCCGGTGAAGAGAGTTGCAAGCCCGATGTCCATTTTTCT CGGCACCTTCGGCAACTGAAATCGGGTTCTTCTTTGTCACTTTTTATTTC ATTTTTGACGTTGCTCTGGACCATGCTCCCTTTTTCCGTTCTCTTTTTGT AGCGTTGTGTGACGTTTCGGGGTCCGTTTTGTTTTGCCGAGTTTCCTTGT CGTACCTTAAGTGGATTGATGGCATCTCCCGCGTACTACGAATATACACC TGGTATTGGTTAAGCAGCTGGGACCACGGAAATCGTCCATGATCGGAGGA GTTCGGACTTAGAAGGTATTGGGTAGAGATCGGAATGGTTTTTAATGTGA AGACAACACACATAACGCACAACACACCAGGCGGAGGCACCCGCGTACTA CAAGTTACAGCCGTAGCTGCTGTACACAGTGGTATTCACGTCCAACGTCA CAACAACCTTCGACATACACATACAGCAGTACCGTATTTGAACGCTGCAC AGCAGCACCCTTCCCCCCCCCGCCGAGCAATGCGTATCTCATCGCAGCGG CACGCGAGCAATAGCTGCCTTGCGCGGGAGACGTTCTTCCACCAAATTCA GATTCAAAACCTTGAGTACTGCTGTTGTATGGCATCATGTACTTGTGCTT TACTGCCGTTGCAGAAACCTCGAAATCCAACAGCAGTAAGTATAATCTTT GTGTGTACAACAATAGTCTTCATCGGGGCGCGTACCACTTCCCCTGTGAA GTACAGGCACTTCTCGTCATGCTAGCATCATATCATAGCAAGTTTCATAG TTTTCTTGCGTGTGGGCGCAGCAGCCATCACAACGATAAATGGTGAGGAA GAAAAATAAAAAATGACGAATCAGCGAAATTTCAAGTTTTCGTACAAGTA CTGTACGGCACCAAGGGAGACGTCGTTAACAGGGAGCCGAACAGCAACGA GGCCGTTTCGGCTGGAAAGCATTGGGGCTTTATCGAAAAGTGATGCGGGG CCGCAAGACCACAAGAACGTGTGGTTTGAAAGACTTATGGCTGCGAATCT GAGAAGGATTAAATGTATGGCTTCTTGACTATGTCCTGTCTTACGCGACG GTACGGAAAAGGCCGAAACCGATTTGCCGAAATAGTCCGGGGGGTGGGGG GGGTTCGGGCTACAATGACTTGTCTTGAGAGTAGCGAATTGTTTCCATTA GACGCTGCGCGTCTTGATTATGCGTCTTGATTGTGCGTTTGGGTTTTGCC ATCCGAAAAGGCTTGTTGTTTGTTTTGTTATTTCCCTTTCCGTTCTTTCT TTCTACGTTTTTACGTTGTGCGCTGGGTCGATGGGAGTTGCAACCTCTCG ATGCTTGATTTCGGCCCTTTGAACGAGGTGTTGATACTGTTGATCCTGCC GTACCTGGTATTTTACGCGAAAAGCCGATGAGGGGGAAAGGGTTGGCCGG ACCCTTCTCGCGATAAAAATGAAGGCCAGCACCGCAGACGGAGGGTGGAG GAAAACGAAACAAAAAAGACGCGTTGACCTTCCTTCTGGTGTGTGACCCC GGCTGATGCGCACTACCTTTCCCGAAAAGGGTGTCACTCATAGACTGGCG ATAGATGGGATGACAACACGCACAACAAACACGTACTACTGCTTCATGAT GGTTCTTTGTTTTGTGTCGATGTGATCCCCATTTTCGTGTGTACCACTGC TGTGTGTGTTTGTTACCTACGGGGGGGGGCGGGGGCAACTTCTGCATTTT ATAGGCCTTTGGAATCGTGCTAGTTCGAGACCCGAGGGTGTCCGAGGTGG ACAACGATCAGTTTCTGGACCAGATGGAGAAGTACTACGCTCAGAGCGAT GGGATCAAGGACGCAAGACCAGAGGTATGATAGGTGTGCAGGTATGCGTA TGCACTACACAGCTGCACCGCCGTTCGATGTGCCGACCAGTTCTGCACTG GTTGTTCCGCGAGCGGCCGTCCCCACGGTATCACAGCTGTGTCGCCCCTC CACCCCCCCCCCCCCCGCTCGCCCGTCGCTACAGTCATGTGAGAACTGCC ATCTGCTCGGTCGTAGAAGAGGAGGTCTTGGGGTTTTGCAAGTGTGAGAA CTGCGTGCAGTGGGTCGTGCCAAGCGGTACAAGTACGAAGGCTTTTCCCA CGTACACACGCGCGCGCGCGCGCGACCTTCATGTATTCGAAGTTTCTGTA TCCGAGAAACGCAGTATAGCAGCAGTACGCCCCTCTATGAGACACGTTAG GGCCTTCATTGTTTGTCTCGCTGGCGCGGATAATGTTGAGGTCGGCATCG TTGGTCAGGTCACTGAAATCCAACTTTAGTGTCGCACGTATGATACTCCC GCCCGAGTGTGCTATCATAGCCTGTACCGGTCATGCATTCTTCTCCTCAC CCCAACCCATGCTCTACGGCGTTCTGCCACGGTCACACTGAAAGAAGTAC TGCAAAGGTTATACATGGAAAGATGGGCATGGGCTTGTTCTGGCTCTTGT TCTTGGCCCTAACGCCCCCCGCCCTGCCCCACCCCGCCCCACCCCACCCC ATCCCACCCCACCCTTCCCCATCCTTGGAACTCAACGCCCGACTAAAGTG GTCCTACCAAGTTGGCGTAACTCCAGAGGGCACCGAGCGACCGAGAGGAC ACTGCGAGCGCATCAGTCGCTTGCCGGACGGGCATCGACCGCTGACGCTG TGCCCCCCCGAGGCTGACCCCAAGTGGCGATTCTTCTGGACGATCGTGAG CATTTTCTTTTAAAGATGCGACTATGATAACCCACTGTAGGCAAAAATAT AGCAGGTTTTGTTTTCGTGCCCTCACCGATGTTGACCGCAACCTTGGCTG CCAGGCGATTAATGTTGGCCAGAACCTTTGTGGCCAGGCGGTTACTGATT GCTTGGTCCAGAGTTACACACTCTAGTGTAGTTGGCGAGAAAAGTGCCAA GAAGATACACACCGAGGATCATTGACACGTGAAAACTCTTGCCTTGCCTG TTTTTTTGCTAACTATGCAAGAGTACAAGTATGTCACATCACGTAGCTGG CATGCGCCATGTCTCGTACTTGGAGTATTTTGTGTGAAATGCAAGGAAAT GTCCACGATTTCGTGCAACGATATTGTCTTGCCGTATCAGTCGATTGTAC CAGATAAGTCATTCAAGTAAACGGCACGTGGTCGCTTTATATTTTGTGGG CCGGCACCTGTTTATTGCACTCGATCGATCGCTACACCACCAGTAGTCGG GCCATGTAAAACGTTTTTTTACGGCCCTCCTTTATATGATGTCCAATTTA ATCGGGCGTGATCGTTGCTTGCAATATGACGGGAATGTCCATCCAATACA GCAATTTAGTGTCGTGTTAGTCTCTCGGGCTCATAGCCCGATATGGTACA TGATGCTTTTAAAAGGAGCCCAACGGTCAGACGTGGTGCAACGTACAGTA GTGTCGTGCCGGTCCGTCGTCGGTCTAAGCATGGCACACGGTTGTTTGAC TGTTTGGTTGCACTTATCGTGTTCACGCAGGGTCCACGCCCGGCAGCGAC GAAATATCGCAGCCTCAATGCCCCGCCCGTCGTGCCGGAAGGCTTCGAAA ACTGGTCCGCGATCATGGACGCATGGGGAAACAAGGTAGACGTGAACAGC TGTGCGCCCCTCGCTTTCGAACACGCACAGCAGCAGACCACGACATGTGC TCCGGCTTCTTGTCCCGTAGAAGTACCTCAGTAGAGGATATAATTCCTAG CTTTACGGCGCGACGGTTGGAGCCGAGAAAGTAACGCTCGTGCACGAGTA TGCGCCTGATAAGAACGAACAGGCTAATAGGAGGGACGCTGTGTGCGGTC GACGCTGCCGCCGTCACGAATCGCGGTGAGGTTGCTCGGCCGACTGACTG GGCATGGTTTTGTGTGTGCCTCTTTTTTGTTGCCTTCTCGTGGTCCGGCC CCCTCGAGGTGTTTTCTGTCGGTCATCACATGGTTGTTTGTTTTTTTATT TTGCTGTCGTTCACTGGCCCTGTTGTCAGATGATTGGCGCGCTGGAGACA GTCTCGCGGCTGTGCGCGATCGGCCTCGATCTCGAGGAAGACGCCTTGTC CTCGCTCATGCACGAGGGTCCTCACCTTCTGGCGCCGACGGGTGAGAGCG AGATTGAGTAACTTGTTCGAACACCCTCTTCTTCTTTTTCCGACTGCATC GAGATATCATACGCCAAACAAAGCCATTCCACGAGAGCAATATTAAAGCT TCTGCGTCTCTCTTTGTTCCCGACCGAAACTCCCTCCCCAGCATGTTTAC GGTGCACCACACACCGTACGCAACATGTCTGTCAAACCCGAAGGTCGGGA TAAACCGGCACGCGGGCCACGAACCACAACAACTCGTGTGTAGAGCTTTC GTCAGGGAAGCTTAAGGTTTCAATCTGCACGCAGCCAGGTATCGCGTCGT GTTCGTCGCACCACCAAACCCCTCCACACACCCTGTCTTGGCATCATGTG CAGGCTCGGATTTCGGAAAATTCAACTCCGTCGGCACGGTCCTAGCAGGT TATCACTACGACTTCAACCTGTTGACTATCCACGGAAAGAGCCGATACCC CGGTCTCAGCGTTTGGCTTCGAGATGGCAGGTAGGTATCATGGGGTGTCA GATCAGACCCGCGCTTTTGGTGCGCATGCCCTTGGTTGTCGTTGAGAGCC GCCCTCCAGCGGGCTTGCCCGCTTGATTTATTTTGGAGCCTGAACCCGGC GGTTAAACCCCCAGAAACGGGGAGCTTTATCGGTGGATGTGCGATACCGG ACGTGTGCTTCGCTGGCCAATTTTTTTTCCCCCTTGGTTGCTCGTTTGCT TGTTTCATTTGTCACACCACCAATCAGCTCGCGGATACCTTCTTCGGTTG TTCGTTTTTTCCCACAAAAGTTTTTCGTGGTCTCGTCCTTTGTGTTTTGC AATTTGCCAGGAAAATGCCAGTTTCTGTGCCAGATGGGTGCCTGTTAGTC CAGGCCGGGAAGCAGCTGGAACGGCTCACCGGAGGGCACGTGTTGGCAGG CTTTCATGAGGTGCGATAGATGAATGTCGGACTATCATACACCTGTATGC ATAGTGCACGAATTTAATTCAGGCTTGAGCAATTATCCTTGTTTTTGTTT CGTTTTTCCTTTTCTCATTGATTGGTGTACACCGTGTCTTCCCTTTCTCT CTTGTCCTTCAAGTCTTGACATACAGCATGTCCATGTTCCGCCGGGGCCA CACAGAAGAATTCCTCTGGCCCACACCCCCTCCCCCCACCTGCCTCCTGG AGTAGGAGGTCATTTTTGTGCGTAATTTCATGCAAGAAGTCCTCTTATTC TCTGTGTGTCGATACTAATTTTTGTACGGCATCGATAGTATGGTAGGCTC TCGTTTGTTTGAGCTGAAAGCTTCAGCTTTGCCGAGGTATGCCCTTTCCT TCCTCCGTGTACGTTGCCTCCACTGGCTGAAGCCGAAAGATGCGCGTGTA GTCGCCACCATCCGCAAGATTTGACCCTTATTGCTGCTGTGGGACATGTC CTGCTGACGCCATGTAGGCGTGCGTGAGGTTTGTCTTACCCACCTGTTGT GCTTCCGCCACACCCGTTGTGACCTGATGCTTTTTTAACGGCTGTGGCAA CGATGTCACAGGTTGCGGTGTCGGAGGCGACCATCGAGGCAATGCGGAAA CGGAAAGAAGCGGGCCGATCTCTGTGGAGGATTTCATCCACCTGTTTCGG ACACGTGGCTTCCGACCAGGTCTGCGTTGTTATCCCAAATTCTTGGGGCA AGGTTTGATGATAGCCGGTTTGAGTGATTTTCGAACTTTCAGCAGCTTCC ACAGAAGCCGACTTTTCACCGAGATTCTTTAGAAATAGAAATTGCACTTG ACTTTCTCCGATCCAAAACCTCCCGTAGAACGTATCCACGACTCCCACGG AAATCGAAGGAATCCTTGGAACGTCTTCGATCACAGGGGCACTTCCGGCC TGTCGTGACCGTCTGGGTTGGGTCGGTGTGCGAACTGTTGTGGGTAGACA GACGGCAATGGTCTGTACCAATGCAAACGTTCACTAGAATGCCTACAAGC ACCTCGCAGGCATGCTTAACATGTATATCTTCGTTGATAATCTTGCGCGT GATAACCTGGAATCTACGTATGGTGGCAAATCAATAATGCCTTTGCTGTT TGCCTGTTCGCGCCCAGGTTCTTCAGCCGCTCGGAAAGTTCGCCACGGAA GAGGCCCTTGCAGAATACCCCCCCATCACGGCAGGAGACATGATGCAGGA GGAGCTCAAGGCTATCAATCTGGCCGCATGATGTACGGAGGAGCTCAATC GAGGCTACATCGATGGGGCTACATGATCTCATCGACTGCGCGCATGGTTT TGGAAGACCTCCGCGATCACCGCCTGCTAATCTGATAAGTCGACTTAAGC TGCCTGCGTCAGTGGCAGGGGGCAGGGACCTACCCTTGCAGTGGCGAAAA TGATAGATGCTTGTATGTCACACCCAGGGTCGCGAAGGTCAATCGGGGGG TGCTATGCTCTTACGGTAGGTTATCACACGTGAAGAGATTGTACATTAAC AACGCGTACCGAACCATCGCGTCACCTGAAGTGGCCTGAATTGAGCATCG CTGCATGTGAAAAAAAAGTTGTGAATCAATTTTGGGGGGGGGGGTTCATA TGACGTGTGATTTCTGCGCT
back to top

Coding sequence (CDS) from alignment at P-littoralis_Contig81:168703..177072+

>mRNA_P-littoralis_Contig81.43.3 ID=mRNA_P-littoralis_Contig81.43.3|Name=mRNA_P-littoralis_Contig81.43.3|organism=Pylaiella littoralis U1_48|type=CDS|length=1032bp|location=Sequence derived from alignment at P-littoralis_Contig81:168703..177072+ (Pylaiella littoralis U1_48)
ATGGACGGATTCGAGATACCTGTCGTCGATCTCTCCGCGTGGGTGGAGGG
AGAACGCGGAAATGATAAAGACTGCCAGAACTTGGCGCATGCTCTGCATG
CCTTTGGAATCGTGCTAGTTCGAGACCCGAGGGTGTCCGAGGTGGACAAC
GATCAGTTTCTGGACCAGATGGAGAAGTACTACGCTCAGAGCGATGGGAT
CAAGGACGCAAGACCAGAGTGGTCCTACCAAGTTGGCGTAACTCCAGAGG
GCACCGAGCGACCGAGAGGACACTGCGAGCGCATCAGTCGCTTGCCGGAC
GGGCATCGACCGCTGACGCTGTGCCCCCCCGAGGCTGACCCCAAGTGGCG
ATTCTTCTGGACGATCGGTCCACGCCCGGCAGCGACGAAATATCGCAGCC
TCAATGCCCCGCCCGTCGTGCCGGAAGGCTTCGAAAACTGGTCCGCGATC
ATGGACGCATGGGGAAACAAGATGATTGGCGCGCTGGAGACAGTCTCGCG
GCTGTGCGCGATCGGCCTCGATCTCGAGGAAGACGCCTTGTCCTCGCTCA
TGCACGAGGGTCCTCACCTTCTGGCGCCGACGGGCTCGGATTTCGGAAAA
TTCAACTCCGTCGGCACGGTCCTAGCAGGTTATCACTACGACTTCAACCT
GTTGACTATCCACGGAAAGAGCCGATACCCCGGTCTCAGCGTTTGGCTTC
GAGATGGCAGGAAAATGCCAGTTTCTGTGCCAGATGGGTGCCTGTTAGTC
CAGGCCGGGAAGCAGCTGGAACGGCTCACCGGAGGGCACGTGTTGGCAGG
CTTTCATGAGGTTGCGGTGTCGGAGGCGACCATCGAGGCAATGCGGAAAC
GGAAAGAAGCGGGCCGATCTCTGTGGAGGATTTCATCCACCTGTTTCGGA
CACGTGGCTTCCGACCAGGTTCTTCAGCCGCTCGGAAAGTTCGCCACGGA
AGAGGCCCTTGCAGAATACCCCCCCATCACGGCAGGAGACATGATGCAGG
AGGAGCTCAAGGCTATCAATCTGGCCGCATGA
back to top