mRNA_P-littoralis_Contig81.9.2 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig81.9.2 vs. uniprot
Match: A0A6H5KJ99_9PHAE (PAP_fibrillin domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KJ99_9PHAE) HSP 1 Score: 397 bits (1019), Expect = 2.180e-131 Identity = 210/287 (73.17%), Postives = 235/287 (81.88%), Query Frame = 3
Query: 108 MNRFGRIALCLLSFKGGSESFRLRAFSPNTATXXXXXXXXXXXXXTIAPQRGARAGGFSTRQRHLSGW-RLSSSAVVDVDSTSIVESVEDLKARLLRASVGVNRGLSCQEGEEAEIVQIVEDLERQNPNPTPNDGFAEGTSILSGEWKLVFTSALDVLSLGLIPGVQVGQIFQNINEDGSEITNVVDLQPEAAPVFERFAGSTSARLKVLAASALEGDKRITLSFRSSQYAPQTLLGRDVSSTLPPFKISFPEIPGTNAGWIDTTFIDEDIRVARAFGGNLFVLARV 965
M RFGRIA CLLSFKGGS+SF LRA S G GG + S RLSSS +VDV+STS E V DLKARLLRAS GVNRGLSC+EG++ EI++IVE+LERQNPNPTPNDGF+EG SIL+GEWKL+FTSALDVLSLGLIPGV++GQIFQNINEDG+EITNVVDLQP+AAPV ERFAGSTSARL+V AA++LEGDKR+TLSFR SQY+PQTLLGRDVS+TLPPFK+SFPEIPGTNAGWIDTTFIDE+IRVARAFGGNLFVLARV
Sbjct: 2 MKRFGRIATCLLSFKGGSQSFTLRAHSAVRRAPVRRERVDCG---------GIGGGGVILNKTGYSARSRLSSSVIVDVESTSTDEPVGDLKARLLRASAGVNRGLSCREGDQEEILEIVEELERQNPNPTPNDGFSEGASILAGEWKLIFTSALDVLSLGLIPGVEIGQIFQNINEDGTEITNVVDLQPKAAPVLERFAGSTSARLEVFAAASLEGDKRLTLSFRRSQYSPQTLLGRDVSATLPPFKVSFPEIPGTNAGWIDTTFIDEEIRVARAFGGNLFVLARV 279
BLAST of mRNA_P-littoralis_Contig81.9.2 vs. uniprot
Match: A0A7S2XYK8_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XYK8_9STRA) HSP 1 Score: 209 bits (531), Expect = 5.120e-60 Identity = 103/196 (52.55%), Postives = 140/196 (71.43%), Query Frame = 3
Query: 387 LLRASVGVNRGLSCQEGEEAEIVQIVEDLERQNPNPTPNDGFAEGTSILSGEWKLVFTSALDVLSLGLIPGVQVGQIFQNINEDGSEITNVVDLQPEAAPVFERFAGSTSARLKVLAASALEGDKRITLSFRSSQYAPQTLLGRDVS---STLPPFKISFPEIPGTNAGWIDTTFIDEDIRVARAFGGNLFVLARV 965
L++ G NRGL+ E+ +I ++E LE NPNP P DG +GTS L GEW+L+FT+ALDVLS+G++P V VGQ++QN+N DGSEITN++DLQP APV GS+ ARLKV A +E KRI ++F SS+ PQTLLGRD++ S+LPP K+ FP G++DTT++D+++RVAR+ G NLFVL +V
Sbjct: 3 LIKTCSGTNRGLTTTNEEKTKIFDLLERLEELNPNPNPCDGLLDGTSPLEGEWQLLFTNALDVLSVGIVPAVYVGQVYQNVNYDGSEITNIIDLQPGLAPVLNPLIGSSVARLKVRARGKVESSKRIAINFLSSELQPQTLLGRDITGLFSSLPPLKVEFPTQAPQPFGYVDTTYVDDEMRVARSLGENLFVLIKV 198
BLAST of mRNA_P-littoralis_Contig81.9.2 vs. uniprot
Match: A0A6S9HUA9_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9HUA9_HETAK) HSP 1 Score: 207 bits (528), Expect = 2.600e-58 Identity = 108/216 (50.00%), Postives = 145/216 (67.13%), Query Frame = 3
Query: 327 AVVDVDSTSIVESVED---LKARLLRASVGVNRGLSCQEGEEAEIVQIVEDLERQNPNPTPNDGFAEGTSILSGEWKLVFTSALDVLSLGLIPGVQVGQIFQNINEDGSEITNVVDLQPEAAPVFERFAGSTSARLKVLAASALEGDKRITLSFRSSQYAPQTLLGRDVSSTLPPFKISFPEIPGTNAGWIDTTFIDEDIRVARAFGGNLFVLARV 965
A V VD+T+ + ED LKA LL A +G+NRG S E + +VE LE NPNP P G GTS LSG+W+LV+T+ALDVL++ L+P V VGQ++QNIN D SEITNV+DLQP AAP+ ST ARLKV A+ +E R+ + F SS+++P+T LG++VS LP + SFP++ GWI+ T++D+ +RV RA G N+FVL RV
Sbjct: 73 AAVVVDTTASAPTAEDRAALKAELLGACLGLNRGFSATAAEARRVQGLVELLEADNPNPMPTQGLEFGTSPLSGDWRLVYTNALDVLTVALVPAVAVGQVYQNINGDASEITNVIDLQPSAAPLLNAAGASTVARLKVKASGKVESGTRVAIKFISSEFSPRTFLGQEVSGLLPAPRFSFPQVANP-IGWIENTYVDDSLRVCRAIGDNVFVLTRV 287
BLAST of mRNA_P-littoralis_Contig81.9.2 vs. uniprot
Match: A0A6V1M850_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1M850_HETAK) HSP 1 Score: 177 bits (450), Expect = 4.770e-48 Identity = 85/161 (52.80%), Postives = 115/161 (71.43%), Query Frame = 3
Query: 483 NPNPTPNDGFAEGTSILSGEWKLVFTSALDVLSLGLIPGVQVGQIFQNINEDGSEITNVVDLQPEAAPVFERFAGSTSARLKVLAASALEGDKRITLSFRSSQYAPQTLLGRDVSSTLPPFKISFPEIPGTNAGWIDTTFIDEDIRVARAFGGNLFVLARV 965
NPNP P G GTS LSG+W+LV+T+ALDVL++ L+P V VGQ++QNIN D SEITNV+DLQP AAP+ ST ARLKV A+ +E R+ + F SS+++P+T LG++VS LP + SFP++ GWI+ T++D+ +RV RA G N+FVL RV
Sbjct: 56 NPNPMPTQGLEFGTSPLSGDWRLVYTNALDVLTVALVPAVAVGQVYQNINGDASEITNVIDLQPSAAPLLNAAGASTVARLKVKASGKVESGTRVAIKFISSEFSPRTFLGQEVSGLLPAPRFSFPQVANP-IGWIENTYVDDSLRVCRAIGDNVFVLTRV 215
BLAST of mRNA_P-littoralis_Contig81.9.2 vs. uniprot
Match: A0A0G4GXJ9_VITBC (PAP_fibrillin domain-containing protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4GXJ9_VITBC) HSP 1 Score: 170 bits (430), Expect = 4.940e-44 Identity = 92/199 (46.23%), Postives = 132/199 (66.33%), Query Frame = 3
Query: 375 LKARLLRASVGVNRGLSCQEGEEAEIVQIVEDLERQNPNPTPNDGFAEGTSILSGEWKLVFTSALDVLSLGLIPGVQVGQIFQNINEDG--SEITNVVDLQPEAAPVFERFAGSTSARLKVLAASALEGDKRITLSFRSSQYAPQTLLGRDVSSTLPPFKISFPEIPGTNAGWIDTTFIDEDIRVARAFGGNLFVLARV 965
LK L GVNRG + + + A+I++++E LE NPNP PN +G+S L+GEW+L+FT+ALDVL LGLIP VQVGQ++QN+N DG + NVV+LQP+ V RF GST ARL+V A++ +E D ++ L+F+S + P T LG+ V P K++ G ++TT++DED+R+AR FG L+VL +V
Sbjct: 109 LKKDLYLMCPGVNRGFNAKRPDSADILEVLELLESVNPNPQPNL-MKDGSSPLNGEWRLLFTNALDVLLLGLIPAVQVGQVYQNVNLDGVVNAAENVVELQPQFDSVANRFLGSTVARLRVRASAEVESDSKLYLTFQSVAFEPDTFLGQLVPRNWPWPKVNLNREGRRGGGPVETTYVDEDLRIARGFGNELYVLTKV 306
BLAST of mRNA_P-littoralis_Contig81.9.2 vs. uniprot
Match: A0A7S0G6A7_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0G6A7_9RHOD) HSP 1 Score: 165 bits (417), Expect = 1.410e-41 Identity = 83/202 (41.09%), Postives = 131/202 (64.85%), Query Frame = 3
Query: 363 SVEDLKARLLRASVGVNRGLSCQEGEEAEIVQIVEDLERQNPNPTPNDGFAEGTSILSGEWKLVFTSALDVLSLGLIPGVQVGQIFQNIN--EDGSEITNVVDLQPEAAPVFERFAGSTSARLKVLAASALEGDKRITLSFRSSQYAPQTLLGRDVSSTLPPFKISFPEIPGTNAGWIDTTFIDEDIRVARAFGGNLFVLAR 962
S E LK L+ A++G NRG + + EI I+ LE +NP P PN+ + L G+WKL++T+ALD+L+LG+IP VQ+GQ++QNI D E+ N+ L+P +APV RF TS + V A + ++GD + + F + +++PQ+LLGRDV LP ++ + G AG+I+T+++DE++R+A++ G N+FVL R
Sbjct: 180 STEQLKRDLVLAALGTNRGFAATADQTYEIRSIISSLESKNPTPVPNE-----SEKLEGDWKLIYTNALDILALGVIPLVQLGQVYQNIKMLSDKIEVENLAILEPSSAPVLNRFGARTSLEVSVKATAEVDGDNILNIKFENQKFSPQSLLGRDVLGKLPALELG---LRGVAAGYIETSYLDEEMRIAKSIGNNIFVLIR 373
BLAST of mRNA_P-littoralis_Contig81.9.2 vs. uniprot
Match: A0A4D9CVH1_9STRA (PAP_fibrillin domain-containing protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CVH1_9STRA) HSP 1 Score: 157 bits (397), Expect = 2.170e-39 Identity = 93/225 (41.33%), Postives = 136/225 (60.44%), Query Frame = 3
Query: 318 SSSAVVDVDSTSIVESVEDLKARLLRASVGVNRGLSCQEGEEAEIVQIVEDLERQNPNPTPNDGFAEGTSILSGEWKLVFTSALDVLSLGLIPGVQVGQIFQNINEDGSEITNVVDLQPEAA-----PVFERFAGSTSARLKVLAASALEGDKRITLSFRSSQYAPQTLLGRDVSSTLPPFKISFPEIPGTNAGWIDTTFIDEDIRVARAFGG-----NLFVLAR 962
SSS VD+T+ + ++L+ LL VG N+G S E E +I + DLE NP P P + F++GTS LSG W+LV+T ALDVL LGL+P +G++FQNI+ DG I NVV++ A+ P+ + G ++ARL+V A S + R++L+F+S+ + P TL G +V L K+ F P N GWI+TT++DE IR+ R+ GG ++FV R
Sbjct: 84 SSSGPDVVDATARATTRKELQHDLLLLLVGQNKGFSVSESEREDIDDTLRDLEAVNPTPRPTEAFSQGTSPLSGTWRLVYTDALDVLVLGLVPLAVIGKVFQNISPDGKSIANVVEVSQGASQLSFFPLLGKL-GDSTARLRVEATSEILSPTRLSLTFQSAGFEPVTLFGMEVEQQLRVPKVDFWRSP--NVGWIETTYVDEKIRIGRSPGGLGGQGSVFVFVR 305
BLAST of mRNA_P-littoralis_Contig81.9.2 vs. uniprot
Match: A0A2V3J8M9_9FLOR (Plastid-lipid-associated protein, chloroplastic n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J8M9_9FLOR) HSP 1 Score: 142 bits (357), Expect = 3.160e-34 Identity = 87/205 (42.44%), Postives = 123/205 (60.00%), Query Frame = 3
Query: 366 VEDLKARLLRASVGVNRGLSCQEGEEAEIVQIVEDLERQNPNPTPNDGFAEGTSILSGEWKLVFTSALDVLSLGLI-PGVQVGQIFQNI-NEDGSE--ITNVVDLQPEAAPVFERFAGSTSARLKVLAASALEGDKRITLSFRSSQYAPQTLLGRDVSSTLPPFKISFPEIP-GTNAGWIDTTFIDEDIRVARAFGGNLFVLARV 965
+ DLK L + VNRGL+ +I+ ++E +ER+NP P P + +L GEW+LVFT+ALDVLSLGL+ P V +++QNI N D ++ +TNVV+L+P APV F G T L V AA D RI + F+ Q+ P ++ G ++ P +S P I G+ G+I+TTF+DEDIR+ RA N+FVL RV
Sbjct: 90 LSDLKLDLFGMASSVNRGLAASPSVREQILALIEQIERENPTPCPTY-----SDLLLGEWRLVFTNALDVLSLGLLAPIALVSEVYQNIENSDQNDFSVTNVVNLEPAIAPVSNSFFGRTMGALYVSAAGTRRNDTRIDIVFKGVQFKPMSIAGLEL-----PGALSTPSIAIGSPRGYIETTFLDEDIRILRAPRSNVFVLQRV 284
BLAST of mRNA_P-littoralis_Contig81.9.2 vs. uniprot
Match: R7Q658_CHOCR (PAP_fibrillin domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q658_CHOCR) HSP 1 Score: 127 bits (319), Expect = 5.190e-29 Identity = 85/222 (38.29%), Postives = 119/222 (53.60%), Query Frame = 3
Query: 339 VDSTSIVESVEDLKARLLRASVGVNRGLSCQEGEEAEIVQIVEDLERQNPNPTPNDGFAEGTSILSGEWKLVFTSALDVLSLGLI-PGVQVGQIFQNINE---DGS-----EITNVVDLQPEAAPVFERFAGSTSARLKVLAASALEGDKRITLSFRSSQYAPQTLLGRDVSSTLPPFKISFPEIPGTNAGWIDTTFIDEDIRVARA-----FGGNLFVLAR 962
VD+ + + DLK L A NRGL+ + A I+ +V +LER P P A+ +L G W+L+FT+ALDVLSLGL+ P QVGQIFQNI E +G +I NVV L+P APV G + + V A D R+ ++F + + + G + + +P K + G+ G+I+TTF+DEDIRVARA G LF+L R
Sbjct: 76 VDAQTRAVPISDLKCSLYAAVSSTNRGLTASADDRANILSLVAELERAKPPTAP----ADDPGMLCGRWRLLFTNALDVLSLGLLAPVAQVGQIFQNIYEVPLEGKGDYDYDIENVVQLEPAFAPVSNVLGGQSITSITVSAEGRKTSDSRVDITFVQNAIKQEKIFGMQLPNEIPAAKFAI----GSPVGYIETTFLDEDIRVARAPPVRSQEGGLFLLIR 289
BLAST of mRNA_P-littoralis_Contig81.9.2 vs. uniprot
Match: A0A7S0BNX1_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0BNX1_9RHOD) HSP 1 Score: 119 bits (299), Expect = 4.410e-28 Identity = 57/136 (41.91%), Postives = 93/136 (68.38%), Query Frame = 3
Query: 561 SALDVLSLGLIPGVQVGQIFQNIN--EDGSEITNVVDLQPEAAPVFERFAGSTSARLKVLAASALEGDKRITLSFRSSQYAPQTLLGRDVSSTLPPFKISFPEIPGTNAGWIDTTFIDEDIRVARAFGGNLFVLAR 962
+ALD+L+LG+IP VQ+GQ++QNI D E+ N+ L+P +APV RF TS + V A + ++GD + + F + +++PQ+ LGRDV LPP ++ + G AG+I+T+++DE++R+A++ G N+FVL R
Sbjct: 1 NALDILALGVIPLVQLGQVYQNIKMLSDKIEVENLAILEPSSAPVLNRFGARTSLEVSVKATAEVDGDNILNIKFENQKFSPQSFLGRDVLGKLPPLELG---LRGVAAGYIETSYLDEEMRIAKSIGNNIFVLIR 133 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig81.9.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig81.9.2 >prot_P-littoralis_Contig81.9.2 ID=prot_P-littoralis_Contig81.9.2|Name=mRNA_P-littoralis_Contig81.9.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=317bp MVAMLQPSICGIISLLPLILLPRPVGESSAMNRFGRIALCLLSFKGGSESback to top mRNA from alignment at P-littoralis_Contig81:31456..42654- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig81.9.2 ID=mRNA_P-littoralis_Contig81.9.2|Name=mRNA_P-littoralis_Contig81.9.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=11199bp|location=Sequence derived from alignment at P-littoralis_Contig81:31456..42654- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig81:31456..42654- >mRNA_P-littoralis_Contig81.9.2 ID=mRNA_P-littoralis_Contig81.9.2|Name=mRNA_P-littoralis_Contig81.9.2|organism=Pylaiella littoralis U1_48|type=CDS|length=951bp|location=Sequence derived from alignment at P-littoralis_Contig81:31456..42654- (Pylaiella littoralis U1_48)back to top |