prot_P-littoralis_Contig809.23.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig809.23.1
Unique Nameprot_P-littoralis_Contig809.23.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length179
Homology
BLAST of mRNA_P-littoralis_Contig809.23.1 vs. uniprot
Match: A0A6H5JRZ6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRZ6_9PHAE)

HSP 1 Score: 208 bits (530), Expect = 6.210e-66
Identity = 114/179 (63.69%), Postives = 124/179 (69.27%), Query Frame = 0
Query:    1 MFLAAVSRPRFDSGRNRQFDGKIGIYPFA------------------------------------LINNVFPDIRVKFSAVWTVYVQQDNAPGHRVMQDPEVVAEAGQVGMRMELVNQPPNSPDMNILDLGFFNSIQSLQDRTTPTTIDQLVAEVEWAFWAQTPGTLGSVWTTLQSVLQ 143
            MFLAAV+RPRFDS RNR FDGKIGIYPF                                     LINNV PDIR KF AV TV+ QQD+APGHRVM DPE+VA A Q G R+EL+NQP NSPDMN+LDLGFFNSIQSLQDRTTPTTIDQLVAEVE AFWAQ+PG +  VWTTLQSV +
Sbjct:    1 MFLAAVARPRFDSSRNRHFDGKIGIYPFTVQRAAQRAAQRNSRNRAAGTIVTRSVEVNRVTYKEKLINNVLPDIRAKFPAVSTVFAQQDSAPGHRVM-DPEIVAAAAQ-GRRIELINQPANSPDMNVLDLGFFNSIQSLQDRTTPTTIDQLVAEVERAFWAQSPGAVDRVWTTLQSVFR 177          
BLAST of mRNA_P-littoralis_Contig809.23.1 vs. uniprot
Match: A0A6H5KWV2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWV2_9PHAE)

HSP 1 Score: 190 bits (483), Expect = 2.300e-54
Identity = 100/163 (61.35%), Postives = 113/163 (69.33%), Query Frame = 0
Query:    1 MFLAAVSRPRFDSGRNRQFDGKIGIYPFA-------------------------------LINNVFPDIRVKFSAVWTVYVQQDNAPGHRVMQDPEVVAEAGQVGMRMELVNQPPNSPDMNILDLGFFNSIQSLQDRTTPTTIDQLVAEVEWAFWAQTPGTLG 132
            MFLAAV+RPR+DS R+RQFDGKIGIYPF                                L NNVFPDIR KF +   ++ QQ+NAPGHR M+DP+VVA AGQ   R+ELVNQPPNSPD NILDLGFFNSIQSLQDRTTPTT+++LVAEVE A WAQ P TLG
Sbjct:   97 MFLAAVARPRYDSSRSRQFDGKIGIYPFTVQRAAQRNGRNMAAGTMVTHSVEVNRTLYKKLNNNVFPDIRAKFPSSPIIFAQQENAPGHRAMEDPDVVAAAGQGAGRIELVNQPPNSPDCNILDLGFFNSIQSLQDRTTPTTVEELVAEVERALWAQKPETLG 259          
BLAST of mRNA_P-littoralis_Contig809.23.1 vs. uniprot
Match: A0A6H5JGY9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGY9_9PHAE)

HSP 1 Score: 156 bits (394), Expect = 1.430e-43
Identity = 78/156 (50.00%), Postives = 107/156 (68.59%), Query Frame = 0
Query:   25 IYPFALINNVFPDIRVKFSAVW--TVYVQQDNAPGHRVMQDPEVVAEAGQVGMRMELVNQPPNSPDMNILDLGFFNSIQSLQDRTTPTTIDQLVAEVEWAFWAQTPGTLGSVWTTLQSVLQEVMLARGENTFKIPHLRKATAARRSTSIPPELPCS 178
            ++   +++ VFP I+ ++      T+Y+Q DN P HR+  DP+VVA     G  + L+NQP NSPD NILDLGFFN++QSLQDR TP T+D+ + EV+ AF  Q+P T   VW +LQ++LQ ++LA+G NTFK+PHL+K  AA    SIP ELP S
Sbjct:  126 VFKRKVVDEVFPAIKARWPGGRGRTIYIQLDNKPSHRINADPDVVAAGIADGWDIRLINQPSNSPDTNILDLGFFNAVQSLQDRNTPRTVDEFITEVKRAFEEQSPSTHDKVWVSLQAILQ-IILAKGNNTFKLPHLKKDNAANSGRSIPKELPLS 280          
BLAST of mRNA_P-littoralis_Contig809.23.1 vs. uniprot
Match: A0A6H5K9R2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9R2_9PHAE)

HSP 1 Score: 145 bits (367), Expect = 2.490e-41
Identity = 71/126 (56.35%), Postives = 90/126 (71.43%), Query Frame = 0
Query:   53 DNAPGHRVMQDPEVVAEAGQVGMRMELVNQPPNSPDMNILDLGFFNSIQSLQDRTTPTTIDQLVAEVEWAFWAQTPGTLGSVWTTLQSVLQEVMLARGENTFKIPHLRKATAARRSTSIPPELPCS 178
            DN P H +  DP+VVA     G  + L+NQP N P  NILDLGFFN+IQSLQDRTTP T+D+ + EV+ AF  Q+P TL  VW +LQ++LQE++LA+G+NT K+PHL+K  AA    SIP ELP S
Sbjct:    4 DNKPSHCINADPDVVAAGTADGWDIRLINQPSNIPHTNILDLGFFNAIQSLQDRTTPRTVDEFIIEVKRAFEEQSPSTLDKVWESLQAILQEIILAKGDNTIKLPHLKKDKAANSGRSIPKELPLS 129          
BLAST of mRNA_P-littoralis_Contig809.23.1 vs. uniprot
Match: A0A6P6X993_COFAR (uncharacterized protein LOC113741020 n=2 Tax=Coffea TaxID=13442 RepID=A0A6P6X993_COFAR)

HSP 1 Score: 143 bits (361), Expect = 1.290e-38
Identity = 85/215 (39.53%), Postives = 119/215 (55.35%), Query Frame = 0
Query:    1 MFLAAVSRPRFDSGRNRQFDGKIGIYPFA---------------------------------LINNVFPDIRVKF---SAVWTVYVQQDNAPGHRVMQDPEVVAEAGQVGMRMELVNQPPNSPDMNILDLGFFNSIQSLQDRTTPTTIDQLVAEVEWAFWAQTPGTLGSVWTTLQSVLQEVMLARGENTFKIPHLRKATAARRSTSIPPELPCSQ 179
            MFLAAV+RPRFD  RN+ FDGKIGI+PFA                                 LI+NV P IR K+     +  +++QQDNA  H    D E +  A + G  + L  QPPNSPDMN+LDLG+F +IQSLQ +  P +ID+L++ VE +F   +  +L +V+ TLQ  + EVM   G N +K+PH+ K    R   ++P ++ C +
Sbjct:  101 MFLAAVARPRFDCSRNKHFDGKIGIFPFAFKEPAKRNSKNRVAGTLETKPILSVTKEVYRRCLIDNVLPAIRAKWPQSDVISPIFIQQDNAKPHIDPMDVEFIEAATREGFDIRLSFQPPNSPDMNVLDLGYFRAIQSLQHQEAPNSIDELISAVEKSFDELSSESLNNVFLTLQLCMLEVMKNCGGNNYKVPHIGKQRLIR-DGNLPLQIGCDK 314          
BLAST of mRNA_P-littoralis_Contig809.23.1 vs. uniprot
Match: A0A6P6VBP7_COFAR (uncharacterized protein LOC113715216 n=4 Tax=Coffea TaxID=13442 RepID=A0A6P6VBP7_COFAR)

HSP 1 Score: 143 bits (361), Expect = 1.880e-38
Identity = 85/215 (39.53%), Postives = 119/215 (55.35%), Query Frame = 0
Query:    1 MFLAAVSRPRFDSGRNRQFDGKIGIYPFA---------------------------------LINNVFPDIRVKF---SAVWTVYVQQDNAPGHRVMQDPEVVAEAGQVGMRMELVNQPPNSPDMNILDLGFFNSIQSLQDRTTPTTIDQLVAEVEWAFWAQTPGTLGSVWTTLQSVLQEVMLARGENTFKIPHLRKATAARRSTSIPPELPCSQ 179
            MFLAAV+RPRFD  RN+ FDGKIGI+PFA                                 LI+NV P IR K+     +  +++QQDNA  H    D E +  A + G  + L  QPPNSPDMN+LDLG+F +IQSLQ +  P +ID+L++ VE +F   +  +L +V+ TLQ  + EVM   G N +K+PH+ K    R   ++P ++ C +
Sbjct:  118 MFLAAVARPRFDCSRNKHFDGKIGIFPFAFKEPAKRNSKNRVAGTLETKPILSVTKEVYRRCLIDNVLPAIRAKWPQSDVISPIFIQQDNAKPHIDPMDVEFIEAATREGFDIRLSFQPPNSPDMNVLDLGYFRAIQSLQHQEAPNSIDELISAVEKSFDELSSESLNNVFLTLQLCMLEVMKNCGGNNYKVPHIGKQRLIR-DGNLPLQIGCDK 331          
BLAST of mRNA_P-littoralis_Contig809.23.1 vs. uniprot
Match: A0A834LPB9_RHOSS (Uncharacterized protein n=1 Tax=Rhododendron simsii TaxID=118357 RepID=A0A834LPB9_RHOSS)

HSP 1 Score: 141 bits (355), Expect = 9.330e-37
Identity = 86/213 (40.38%), Postives = 117/213 (54.93%), Query Frame = 0
Query:    1 MFLAAVSRPRFDSGRNRQFDGKIGIYPFA---------------------------------LINNVFPDIRVKF---SAVWTVYVQQDNAPGHRVMQDPEVVAEAGQVGMRMELVNQPPNSPDMNILDLGFFNSIQSLQDRTTPTTIDQLVAEVEWAFWAQTPGTLGSVWTTLQSVLQEVMLARGENTFKIPHLRKATAARRSTSIPPELPC 177
            MFLAAV+RPRFD+ RN++F GKIGI+PF                                  LI  V P IR K+   + + T+ +QQDNA  H    D E + EA + G  + L  QPPNSPD+N+LDLGFF +IQSLQ +  P  ID+LV+ V  AF   +P TL +V+ TLQ+ + E+M   G   +K+PH+ K     R  ++P +L C
Sbjct:  215 MFLAAVARPRFDTTRNQEFSGKIGIFPFTYKEPAKRTSKNRVAGTLETKVVVSVTKEIIRKCLIEKVLPAIRAKWPRGNGIETILIQQDNARPHIREFDAEFLEEASKDGFDIRLSFQPPNSPDLNVLDLGFFRAIQSLQYQKAPKNIDELVSVVVSAFEELSPQTLDNVFLTLQACMIEIMKVNGGIGYKVPHIGKG-GLMRDDNLPTQLQC 426          
BLAST of mRNA_P-littoralis_Contig809.23.1 vs. uniprot
Match: UPI00125DF384 (uncharacterized protein LOC116015901 n=1 Tax=Ipomoea triloba TaxID=35885 RepID=UPI00125DF384)

HSP 1 Score: 139 bits (351), Expect = 2.030e-36
Identity = 86/212 (40.57%), Postives = 114/212 (53.77%), Query Frame = 0
Query:    1 MFLAAVSRPRFDSGRNRQFDGKIGIYPFA---------------------------------LINNVFPDIRVKFS--AVWTVYVQQDNAPGHRVMQDPEVVAEAGQVGMRMELVNQPPNSPDMNILDLGFFNSIQSLQDRTTPTTIDQLVAEVEWAFWAQTPGTLGSVWTTLQSVLQEVMLARGENTFKIPHLRKATAARRSTSIPPELPC 177
            MFL AV+RPRFDSGRN  FDGKIGI+PF                                  LI+ V P IR K+S  +  ++++QQDNA  H  + D E +  A + G  + L  QPPNSPDMN+LDLGFF +IQSLQ +  P  +D+LV   + AF   +  +L +V+ TLQ  + EVM   G N +KIPH+ K    R    +P  + C
Sbjct:  185 MFLCAVARPRFDSGRNEMFDGKIGIFPFIYKEAAKRRSKNREAGTLVTKPIESVNKEVTRKWLIDYVLPAIRAKWSLSSSKSIFIQQDNARPHISVNDAEFLEAAQKDGFDIRLTCQPPNSPDMNVLDLGFFRAIQSLQYQEAPRNVDELVVATQKAFDDISIESLSNVFLTLQLCMVEVMKRFGGNNYKIPHINKQKLEREGR-LPTTISC 395          
BLAST of mRNA_P-littoralis_Contig809.23.1 vs. uniprot
Match: UPI000B8EED4A (uncharacterized protein LOC110944677 n=1 Tax=Helianthus annuus TaxID=4232 RepID=UPI000B8EED4A)

HSP 1 Score: 139 bits (350), Expect = 2.220e-36
Identity = 76/179 (42.46%), Postives = 112/179 (62.57%), Query Frame = 0
Query:    1 MFLAAVSRPRFDSGRNRQFDGKIGIYPFALINNVFPDIRVKFSAVWTVYVQQDNAPGHRVMQDPEVVAEAGQVGMRMELVNQPPNSPDMNILDLGFFNSIQSLQDRTTPTTIDQLVAEVEWAFWAQTPGTLGSVWTTLQSVLQEVMLARGENTFKIPHLRKATAARRSTSIPPELPCSQ 179
            MFLAAV+RPR+DS  N  F GKIGI+PF  +    P  R + +    +Y+QQDNA  H  + D E   EA + G  + L  QPPNSPD+N+L+LGFF +IQSLQ++    +ID+LV+ V+ +F       L  V+ TLQ+ ++E+M  +G N +KIPH+ K    R+  ++P ++ C +
Sbjct:  210 MFLAAVARPRYDSSGNEVFSGKIGIFPFTTLE---PAKRSR-NHTGPIYIQQDNAKPHIEVNDAEFKLEASKDGFDIRLCFQPPNSPDLNVLNLGFFRAIQSLQEQEVLGSIDELVSAVKSSFERMPSHELNKVFLTLQTCMKEIMKVQGGNNYKIPHIGKGKLERQG-NLPLQIECDE 383          
BLAST of mRNA_P-littoralis_Contig809.23.1 vs. uniprot
Match: A0A6A4Z6G2_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A4Z6G2_9STRA)

HSP 1 Score: 130 bits (327), Expect = 1.780e-34
Identity = 79/193 (40.93%), Postives = 106/193 (54.92%), Query Frame = 0
Query:    1 MFLAAVSRPRFDSGRNRQFDGKIGIYPFA--------------------------------LINNVFPDIRVKFSAVWTVYVQQDNAPGHRVMQDPEVVAEAGQVGMRMELVNQPPNSPDMNILDLGFFNSIQSLQDRTTPTTIDQLVAEVEWAFWAQTPGTLGSVWTTLQSVLQEVMLARGENTFKIPHLRK 161
            MFLAAV+RPR+D+ + + FDGKIGI+PF                                 ++N V P I+VK      V +QQDNA  HR +   E++A  G   +  E+ NQPPNSPD N+LDLGFFNSIQSLQ +    +I +L+A VE AF+      LG  + TLQ V++  M   G NT+ +PH+ K
Sbjct:   16 MFLAAVARPRYDAHKKQMFDGKIGIWPFVEEVAAVRSSKNRPKGTLELTTQSVNADVYQDMVMNEVVPAIQVKMPRGVVVKLQQDNASPHRCVTT-ELIARHGVDSI--EVANQPPNSPDFNVLDLGFFNSIQSLQQQKVARSIGELIAAVEEAFYELPVTILGKTFITLQKVMELSMGCSGGNTYTMPHMSK 205          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig809.23.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JRZ6_9PHAE6.210e-6663.69Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KWV2_9PHAE2.300e-5461.35Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JGY9_9PHAE1.430e-4350.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K9R2_9PHAE2.490e-4156.35Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6P6X993_COFAR1.290e-3839.53uncharacterized protein LOC113741020 n=2 Tax=Coffe... [more]
A0A6P6VBP7_COFAR1.880e-3839.53uncharacterized protein LOC113715216 n=4 Tax=Coffe... [more]
A0A834LPB9_RHOSS9.330e-3740.38Uncharacterized protein n=1 Tax=Rhododendron simsi... [more]
UPI00125DF3842.030e-3640.57uncharacterized protein LOC116015901 n=1 Tax=Ipomo... [more]
UPI000B8EED4A2.220e-3642.46uncharacterized protein LOC110944677 n=1 Tax=Helia... [more]
A0A6A4Z6G2_9STRA1.780e-3440.93Uncharacterized protein n=1 Tax=Aphanomyces astaci... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 26..153
e-value: 6.3E-22
score: 80.3
NoneNo IPR availablePANTHERPTHR47169OS01G0541250 PROTEINcoord: 1..29
coord: 30..178

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig809contigP-littoralis_Contig809:53850..54463 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig809.23.1mRNA_P-littoralis_Contig809.23.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig809 53217..54463 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig809.23.1 ID=prot_P-littoralis_Contig809.23.1|Name=mRNA_P-littoralis_Contig809.23.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=179bp
MFLAAVSRPRFDSGRNRQFDGKIGIYPFALINNVFPDIRVKFSAVWTVYV
QQDNAPGHRVMQDPEVVAEAGQVGMRMELVNQPPNSPDMNILDLGFFNSI
QSLQDRTTPTTIDQLVAEVEWAFWAQTPGTLGSVWTTLQSVLQEVMLARG
ENTFKIPHLRKATAARRSTSIPPELPCSQ
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036397RNaseH_sf