prot_P-littoralis_Contig808.7.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig808.7.1
Unique Nameprot_P-littoralis_Contig808.7.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length121
Homology
[Close]
BLAST of mRNA_P-littoralis_Contig808.7.1 vs. uniprot
Match: A0A3L6V663_9STRA (Histone H4 n=2 Tax=Stramenopiles TaxID=33634 RepID=A0A3L6V663_9STRA)

HSP 1 Score: 204 bits (518), Expect = 7.490e-66
Identity = 105/107 (98.13%), Postives = 106/107 (99.07%), Query Frame = 0 
Query:   14 PQANMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 120
            P +NMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG
Sbjct:   19 PTSNMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 125
[Close]
BLAST of mRNA_P-littoralis_Contig808.7.1 vs. uniprot
Match: A0A453LJ39_AEGTS (Histone H4 n=2 Tax=Aegilops tauschii subsp. strangulata TaxID=200361 RepID=A0A453LJ39_AEGTS)

HSP 1 Score: 203 bits (517), Expect = 1.520e-65
Identity = 108/126 (85.71%), Postives = 112/126 (88.89%), Query Frame = 0 
Query:    1 HNHNPFS------SLKFETPQANMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 120
            HNH P        +L  E  +A MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK+FLENVIRD+VTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG
Sbjct:   11 HNHQPPQLPQRQVNLTGEKGEAKMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 136
[Close]
BLAST of mRNA_P-littoralis_Contig808.7.1 vs. uniprot
Match: A0A1D6IAU4_MAIZE (Histone H4 n=2 Tax=Zea mays TaxID=4577 RepID=A0A1D6IAU4_MAIZE)

HSP 1 Score: 203 bits (517), Expect = 1.570e-65
Identity = 106/118 (89.83%), Postives = 108/118 (91.53%), Query Frame = 0 
Query:    3 HNPFSSLKFETPQANMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 120
            H P  S     P A MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK+FLENVIRD+VTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG
Sbjct:   20 HPPVRSGGDRQPAAEMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 137
[Close]
BLAST of mRNA_P-littoralis_Contig808.7.1 vs. uniprot
Match: A0A453N2X0_AEGTS (Histone H4 n=2 Tax=Mesangiospermae TaxID=1437183 RepID=A0A453N2X0_AEGTS)

HSP 1 Score: 202 bits (515), Expect = 1.660e-65
Identity = 106/114 (92.98%), Postives = 109/114 (95.61%), Query Frame = 0 
Query:    9 LKFETPQAN--MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 120
            L F+TP A   MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK+FLENVIRD+VTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG
Sbjct:    4 LHFQTPSAPPIMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 117
[Close]
BLAST of mRNA_P-littoralis_Contig808.7.1 vs. uniprot
Match: A0A2J6LJW1_LACSA (Histone H4 n=1 Tax=Lactuca sativa TaxID=4236 RepID=A0A2J6LJW1_LACSA)

HSP 1 Score: 203 bits (516), Expect = 2.720e-65
Identity = 105/118 (88.98%), Postives = 110/118 (93.22%), Query Frame = 0 
Query:    3 HNPFSSLKFETPQANMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 120
            H+ F    FE+ +  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK+FLENVIRD+VTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG
Sbjct:   26 HHHFHLHFFESTKFQMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 143
[Close]
BLAST of mRNA_P-littoralis_Contig808.7.1 vs. uniprot
Match: A0A1W0W662_SORBI (Histone H4 n=1 Tax=Sorghum bicolor TaxID=4558 RepID=A0A1W0W662_SORBI)

HSP 1 Score: 204 bits (519), Expect = 3.850e-65
Identity = 107/122 (87.70%), Postives = 111/122 (90.98%), Query Frame = 0 
Query:    1 HNHNPFSSLKF--ETPQANMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 120
            HNH+P    +     P A MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK+FLENVIRD+VTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG
Sbjct:   65 HNHHPLLPNRGGDRRPAAEMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 186
[Close]
BLAST of mRNA_P-littoralis_Contig808.7.1 vs. uniprot
Match: UPI001EEB9003 (histone H4-like n=1 Tax=Daphnia pulicaria TaxID=35523 RepID=UPI001EEB9003)

HSP 1 Score: 202 bits (514), Expect = 5.140e-65
Identity = 105/121 (86.78%), Postives = 113/121 (93.39%), Query Frame = 0 
Query:    2 NHNPFSSLKFETPQA--NMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 120
            NH+ FS + ++T +    M+GRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRD+VTYTEHA+RKTVTAMDVVYALKRQGRTLYGFGG
Sbjct:   21 NHSVFSLVVYQTSETYLKMTGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG 141
[Close]
BLAST of mRNA_P-littoralis_Contig808.7.1 vs. uniprot
Match: A0A369S8R6_9METZ (Histone H4 n=1 Tax=Trichoplax sp. H2 TaxID=287889 RepID=A0A369S8R6_9METZ)

HSP 1 Score: 202 bits (514), Expect = 5.310e-65
Identity = 105/114 (92.11%), Postives = 108/114 (94.74%), Query Frame = 0 
Query:    7 SSLKFETPQANMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 120
            SSL FE     MSGRGKGGKGLGKGGAKRHRK+LRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRD+VTYTEHA+RKTVTAMDVVYALKRQGRTLYGFGG
Sbjct:   29 SSLIFELRLLKMSGRGKGGKGLGKGGAKRHRKILRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG 142
[Close]
BLAST of mRNA_P-littoralis_Contig808.7.1 vs. uniprot
Match: A0A453FVP7_AEGTS (Histone H4 n=2 Tax=Triticinae TaxID=1648030 RepID=A0A453FVP7_AEGTS)

HSP 1 Score: 201 bits (512), Expect = 6.790e-65
Identity = 107/116 (92.24%), Postives = 109/116 (93.97%), Query Frame = 0 
Query:    5 PFSSLKFETPQANMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 120
            PF S   E  QA MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK+FLENVIRD+VTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG
Sbjct:   15 PFLSSYSE--QAAMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 128
[Close]
BLAST of mRNA_P-littoralis_Contig808.7.1 vs. uniprot
Match: A0A1J3ENA7_NOCCA (Histone H4 (Fragment) n=2 Tax=Noccaea caerulescens TaxID=107243 RepID=A0A1J3ENA7_NOCCA)

HSP 1 Score: 201 bits (512), Expect = 7.250e-65
Identity = 105/113 (92.92%), Postives = 109/113 (96.46%), Query Frame = 0 
Query:    8 SLKFETPQANMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 120
            S KF+ P+  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK+FLENVIRD+VTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG
Sbjct:   19 SRKFKFPEK-MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLYGFGG 130
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig808.7.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A3L6V663_9STRA7.490e-6698.13Histone H4 n=2 Tax=Stramenopiles TaxID=33634 RepID... [more]
A0A453LJ39_AEGTS1.520e-6585.71Histone H4 n=2 Tax=Aegilops tauschii subsp. strang... [more]
A0A1D6IAU4_MAIZE1.570e-6589.83Histone H4 n=2 Tax=Zea mays TaxID=4577 RepID=A0A1D... [more]
A0A453N2X0_AEGTS1.660e-6592.98Histone H4 n=2 Tax=Mesangiospermae TaxID=1437183 R... [more]
A0A2J6LJW1_LACSA2.720e-6588.98Histone H4 n=1 Tax=Lactuca sativa TaxID=4236 RepID... [more]
A0A1W0W662_SORBI3.850e-6587.70Histone H4 n=1 Tax=Sorghum bicolor TaxID=4558 RepI... [more]
UPI001EEB90035.140e-6586.78histone H4-like n=1 Tax=Daphnia pulicaria TaxID=35... [more]
A0A369S8R6_9METZ5.310e-6592.11Histone H4 n=1 Tax=Trichoplax sp. H2 TaxID=287889 ... [more]
A0A453FVP7_AEGTS6.790e-6592.24Histone H4 n=2 Tax=Triticinae TaxID=1648030 RepID=... [more]
A0A1J3ENA7_NOCCA7.250e-6592.92Histone H4 (Fragment) n=2 Tax=Noccaea caerulescens... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001951Histone H4PRINTSPR00623HISTONEH4coord: 94..106
score: 90.05
coord: 22..33
score: 95.59
coord: 57..77
score: 93.56
coord: 37..56
score: 93.38
coord: 79..93
score: 91.96
coord: 106..117
score: 97.79
IPR001951Histone H4SMARTSM00417h44coord: 33..107
e-value: 1.8E-29
score: 113.9
IPR001951Histone H4CDDcd00076H4coord: 35..118
e-value: 4.28801E-47
score: 144.566
IPR035425CENP-T/Histone H4, histone foldPFAMPF15511CENP-T_Ccoord: 55..113
e-value: 1.2E-7
score: 31.8
IPR009072Histone-foldGENE3D1.10.20.10Histone, subunit Acoord: 19..120
e-value: 1.8E-58
score: 196.9
IPR009072Histone-foldSUPERFAMILY47113Histone-foldcoord: 20..119
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..35
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..15
NoneNo IPR availablePANTHERPTHR10484HISTONE H4coord: 14..120
NoneNo IPR availablePANTHERPTHR10484:SF185HISTONE H4coord: 14..120
IPR019809Histone H4, conserved sitePROSITEPS00047HISTONE_H4coord: 32..36

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig808contigP-littoralis_Contig808:33407..33769 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig808.7.1mRNA_P-littoralis_Contig808.7.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig808 33407..33769 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig808.7.1 ID=prot_P-littoralis_Contig808.7.1|Name=mRNA_P-littoralis_Contig808.7.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=121bp
HNHNPFSSLKFETPQANMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKP
AIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDSVTYTEHARRKTVT
AMDVVYALKRQGRTLYGFGG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001951Histone_H4
IPR035425CENP-T/H4_C
IPR009072Histone-fold
IPR019809Histone_H4_CS