prot_P-littoralis_Contig808.4.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig808.4.1
Unique Nameprot_P-littoralis_Contig808.4.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length123
Homology
[Close]
BLAST of mRNA_P-littoralis_Contig808.4.1 vs. uniprot
Match: D7FWI9_ECTSI (Histone H2A n=6 Tax=Ectocarpus TaxID=2879 RepID=D7FWI9_ECTSI)

HSP 1 Score: 225 bits (573), Expect = 3.020e-74
Identity = 119/122 (97.54%), Postives = 120/122 (98.36%), Query Frame = 0 
Query:    1 MSGKGKGGRGKKSVTRSAKAGLQFPVGRVGRFLKAGKYASRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKTVKK 122
            MSGKGKGGRGKKS TRSAKAGLQFPVGRVGRFLK GKYASRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARI+PRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKTVKK
Sbjct:    1 MSGKGKGGRGKKSTTRSAKAGLQFPVGRVGRFLKKGKYASRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKTVKK 122
[Close]
BLAST of mRNA_P-littoralis_Contig808.4.1 vs. uniprot
Match: D7G193_ECTSI (Histone H2A n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G193_ECTSI)

HSP 1 Score: 223 bits (568), Expect = 1.040e-72
Identity = 118/121 (97.52%), Postives = 119/121 (98.35%), Query Frame = 0 
Query:    1 MSGKGKGGRGKKSVTRSAKAGLQFPVGRVGRFLKAGKYASRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKTVK 121
            MSGKGKGGRGKKS TRSAKAGLQFPVGRVGRFLK GKYASRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARI+PRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKTVK
Sbjct:   46 MSGKGKGGRGKKSTTRSAKAGLQFPVGRVGRFLKKGKYASRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKTVK 166
[Close]
BLAST of mRNA_P-littoralis_Contig808.4.1 vs. uniprot
Match: A0A6H5KG79_9PHAE (Histone H2A n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KG79_9PHAE)

HSP 1 Score: 209 bits (532), Expect = 8.270e-68
Identity = 108/119 (90.76%), Postives = 116/119 (97.48%), Query Frame = 0 
Query:    1 MSGKGKGGRGKKSVTRSAKAGLQFPVGRVGRFLKAGKYASRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKT 119
            MSGKGKGGRGKKS ++S+KAGLQFPV R+GR+LK GKYA+RVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARI+PRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKK+
Sbjct:    1 MSGKGKGGRGKKSTSKSSKAGLQFPVARIGRYLKRGKYATRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKS 119
[Close]
BLAST of mRNA_P-littoralis_Contig808.4.1 vs. uniprot
Match: D7FVQ5_ECTSI (Histone H2A n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVQ5_ECTSI)

HSP 1 Score: 209 bits (532), Expect = 4.250e-67
Identity = 108/119 (90.76%), Postives = 116/119 (97.48%), Query Frame = 0 
Query:    1 MSGKGKGGRGKKSVTRSAKAGLQFPVGRVGRFLKAGKYASRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKT 119
            MSGKGKGGRGKKS ++S+KAGLQFPV R+GR+LK GKYA+RVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARI+PRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKK+
Sbjct:   52 MSGKGKGGRGKKSTSKSSKAGLQFPVARIGRYLKRGKYATRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKS 170
[Close]
BLAST of mRNA_P-littoralis_Contig808.4.1 vs. uniprot
Match: D8LLP0_ECTSI (Histone H2A n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LLP0_ECTSI)

HSP 1 Score: 206 bits (523), Expect = 1.160e-66
Identity = 106/118 (89.83%), Postives = 113/118 (95.76%), Query Frame = 0 
Query:    1 MSGKGKGGRGKKSVTRSAKAGLQFPVGRVGRFLKAGKYASRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKK 118
            MSGKGKGGRGKK  +RSAKAGLQFPVGR+GRF+K GKY+SRVG GAPVY+AAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELN+LLG+ TIASGGVLPNIHAVLLPKK
Sbjct:    1 MSGKGKGGRGKKITSRSAKAGLQFPVGRIGRFIKQGKYSSRVGGGAPVYMAAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELNRLLGDATIASGGVLPNIHAVLLPKK 118
[Close]
BLAST of mRNA_P-littoralis_Contig808.4.1 vs. uniprot
Match: A0A6H5KGY1_9PHAE (Integrase catalytic domain-containing protein n=7 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGY1_9PHAE)

HSP 1 Score: 221 bits (563), Expect = 1.770e-64
Identity = 117/120 (97.50%), Postives = 118/120 (98.33%), Query Frame = 0 
Query:    1 MSGKGKGGRGKKSVTRSAKAGLQFPVGRVGRFLKAGKYASRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKTV 120
            MSGKGKGGRGKKS TRSAKAGLQFPVGRVGRFLK GKYASRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARI+PRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKTV
Sbjct:    1 MSGKGKGGRGKKSTTRSAKAGLQFPVGRVGRFLKKGKYASRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKTV 120
[Close]
BLAST of mRNA_P-littoralis_Contig808.4.1 vs. uniprot
Match: A0A6U2JFS4_9STRA (Histone H2A n=6 Tax=Bacillariophyta TaxID=2836 RepID=A0A6U2JFS4_9STRA)

HSP 1 Score: 198 bits (504), Expect = 1.000e-63
Identity = 105/122 (86.07%), Postives = 114/122 (93.44%), Query Frame = 0 
Query:    1 MSGKGKGGRG-KKSVTRSAKAGLQFPVGRVGRFLKAGKYASRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKTVK 121
            MSGKGKGGRG KKS T SAKAGLQFPVGR+GR+L+ GKYA+R+GAGAPVYLAAVLEYL AE+LELAGNAARDNKK+RIVPRHI LAV+NDEELNKLLG VTIASGGVLPNIHAVLLPKK+ K
Sbjct:    1 MSGKGKGGRGGKKSTTSSAKAGLQFPVGRIGRYLRQGKYATRMGAGAPVYLAAVLEYLCAEILELAGNAARDNKKSRIVPRHITLAVKNDEELNKLLGGVTIASGGVLPNIHAVLLPKKSAK 122
[Close]
BLAST of mRNA_P-littoralis_Contig808.4.1 vs. uniprot
Match: A0A061QUG5_9CHLO (Histone H2A n=4 Tax=core chlorophytes TaxID=2692248 RepID=A0A061QUG5_9CHLO)

HSP 1 Score: 199 bits (505), Expect = 1.040e-63
Identity = 104/120 (86.67%), Postives = 113/120 (94.17%), Query Frame = 0 
Query:    3 GKGKGGRGKKSVTRSAKAGLQFPVGRVGRFLKAGKYASRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKTVKK 122
            GKGK   GKK+V+RSAKAGLQFPVGRV R+LK GKYA+R+GAGAPVYLAAVLEYLTAEVLELAGNAARDNKK RIVPRHIQLAVRNDEEL+KLLG+VTIASGGVLPNIH+VLLPKK+ KK
Sbjct:    5 GKGKSAAGKKAVSRSAKAGLQFPVGRVARYLKKGKYATRIGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIASGGVLPNIHSVLLPKKSDKK 124
[Close]
BLAST of mRNA_P-littoralis_Contig808.4.1 vs. uniprot
Match: A0A836CG77_9STRA (Histone H2A n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A836CG77_9STRA)

HSP 1 Score: 198 bits (503), Expect = 1.790e-63
Identity = 105/122 (86.07%), Postives = 113/122 (92.62%), Query Frame = 0 
Query:    1 MSGKGKGGRG---KKSVTRSAKAGLQFPVGRVGRFLKAGKYASRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKT 119
            M+GKGKGGRG   KKS ++S+KAGLQFPV R+GRFLK G+YA RVGAGAPVYLAAVLEYL AE+LELAGNAARDNKK+RIVPRHIQLAVRNDEELNKLLG VTIASGGVLPNIHAVLLPKKT
Sbjct:    1 MAGKGKGGRGAEAKKSTSKSSKAGLQFPVARLGRFLKVGRYAERVGAGAPVYLAAVLEYLCAEILELAGNAARDNKKSRIVPRHIQLAVRNDEELNKLLGNVTIASGGVLPNIHAVLLPKKT 122
[Close]
BLAST of mRNA_P-littoralis_Contig808.4.1 vs. uniprot
Match: A0A835ZLE9_9STRA (Histone H2A n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZLE9_9STRA)

HSP 1 Score: 198 bits (504), Expect = 1.800e-63
Identity = 104/121 (85.95%), Postives = 115/121 (95.04%), Query Frame = 0 
Query:    3 GKGKGGRG-KKSVTRSAKAGLQFPVGRVGRFLKAGKYASRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKTVKK 122
            GKGKGGRG KK+V++SAKAGLQFPVGRVGRFLK G+YA RVGAGAPVY+AAV+EYL AEVLEL+GNAARDNKK+RI+PRHIQLAVRNDEELNKLLG+VTIA+GGVLPNIHAVLLPKKT  K
Sbjct:    5 GKGKGGRGDKKAVSKSAKAGLQFPVGRVGRFLKQGRYAKRVGAGAPVYMAAVMEYLCAEVLELSGNAARDNKKSRIIPRHIQLAVRNDEELNKLLGKVTIAAGGVLPNIHAVLLPKKTRSK 125
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig808.4.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FWI9_ECTSI3.020e-7497.54Histone H2A n=6 Tax=Ectocarpus TaxID=2879 RepID=D7... [more]
D7G193_ECTSI1.040e-7297.52Histone H2A n=1 Tax=Ectocarpus siliculosus TaxID=2... [more]
A0A6H5KG79_9PHAE8.270e-6890.76Histone H2A n=1 Tax=Ectocarpus sp. CCAP 1310/34 Ta... [more]
D7FVQ5_ECTSI4.250e-6790.76Histone H2A n=1 Tax=Ectocarpus siliculosus TaxID=2... [more]
D8LLP0_ECTSI1.160e-6689.83Histone H2A n=2 Tax=Ectocarpus TaxID=2879 RepID=D8... [more]
A0A6H5KGY1_9PHAE1.770e-6497.50Integrase catalytic domain-containing protein n=7 ... [more]
A0A6U2JFS4_9STRA1.000e-6386.07Histone H2A n=6 Tax=Bacillariophyta TaxID=2836 Rep... [more]
A0A061QUG5_9CHLO1.040e-6386.67Histone H2A n=4 Tax=core chlorophytes TaxID=269224... [more]
A0A836CG77_9STRA1.790e-6386.07Histone H2A n=2 Tax=Tribonema minus TaxID=303371 R... [more]
A0A835ZLE9_9STRA1.800e-6385.95Histone H2A n=2 Tax=Tribonema minus TaxID=303371 R... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002119Histone H2APRINTSPR00620HISTONEH2Acoord: 12..34
score: 69.69
coord: 56..69
score: 90.54
coord: 98..116
score: 76.04
coord: 41..56
score: 90.36
coord: 70..84
score: 74.98
IPR002119Histone H2ASMARTSM00414h2a4coord: 3..121
e-value: 8.5E-79
score: 277.8
IPR002119Histone H2APANTHERPTHR23430HISTONE H2Acoord: 4..121
IPR002119Histone H2ACDDcd00074H2Acoord: 13..118
e-value: 2.92601E-67
score: 196.402
IPR032454Histone H2A, C-terminal domainPFAMPF16211Histone_H2A_Ccoord: 90..122
e-value: 2.2E-19
score: 68.9
IPR009072Histone-foldGENE3D1.10.20.10Histone, subunit Acoord: 1..122
e-value: 1.3E-63
score: 214.6
IPR009072Histone-foldSUPERFAMILY47113Histone-foldcoord: 2..121
IPR007125Histone H2A/H2B/H3PFAMPF00125Histonecoord: 11..87
e-value: 4.4E-15
score: 56.2
NoneNo IPR availablePIRSRPIRSR037942-1PIRSR037942-1coord: 5..119
e-value: 6.7E-53
score: 178.0
NoneNo IPR availablePANTHERPTHR23430:SF308HISTONE H2AXA-RELATEDcoord: 4..121
IPR032458Histone H2A conserved sitePROSITEPS00046HISTONE_H2Acoord: 20..26

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig808contigP-littoralis_Contig808:8477..8845 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig808.4.1mRNA_P-littoralis_Contig808.4.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig808 8477..8864 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig808.4.1 ID=prot_P-littoralis_Contig808.4.1|Name=mRNA_P-littoralis_Contig808.4.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=123bp
MSGKGKGGRGKKSVTRSAKAGLQFPVGRVGRFLKAGKYASRVGAGAPVYL
AAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELNKLLGEVT
IASGGVLPNIHAVLLPKKTVKK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002119Histone_H2A
IPR032454Histone_H2A_C
IPR009072Histone-fold
IPR007125Histone_H2A/H2B/H3
IPR032458Histone_H2A_CS