mRNA_P-littoralis_Contig807.21.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig807.21.1 vs. uniprot
Match: A0A6H5JCE5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCE5_9PHAE) HSP 1 Score: 486 bits (1250), Expect = 2.590e-164 Identity = 243/345 (70.43%), Postives = 293/345 (84.93%), Query Frame = 3
Query: 27 SAVLLLLPGVCHGLVETCEDLQAAFELTKTQDVEVEMYPFADIECETYTNMTMTSNTLTVSSSENLENFNGNSKLTRVRIEVTNGAKLFWETNVVFGGVEEEDEINNDGGAVYVGEGSTVRFLNNLEMTDVGIINETKEDSDFAAFVRSGGCVWTNGYFRVDGTATFTGCEIVGAGESPPGPGGAIYVGEAGSVLFNKELVITETSITDDSGGKGGGIYNLGKVNIKGNSRFEEIQASNGGAIYNGENAKFTFRNGATAFFRDVSNRDAEGSALFNLGYFKFAGPALFVGAEDPVIVAGYSSETILSKNSVFWALDDSGFETEVISISDSAEITIPSSVIFVGYD 1061
S LLL+PG CHGL+ETC+DL AAFE T+T+DV VEM+PFADIECET+TNMTMTSN+LTVSSSEN++NF+G+S L VR++VTNGAKLFWETNV+F G +EE ++ DGGAVYVGEGSTVRFLN+++M D+ IINE EDSDF++FVRSGGCVWT GYFRVDG ATFTGC+I GAGESPPGPGGA+YVGE GSVLFN + IT+T ITDD GG GGGIYNLGKVNIKG+SRFE+I AS+G AIYNGE A F FR+GA AFF+D++NRD+EGSALFN G+FKF+GPALF AE PVIVA +SETI+S++S FW D+S + +S++D A+ T+P SV FVG+D
Sbjct: 89 SLALLLIPGACHGLIETCDDLLAAFEQTQTEDVVVEMHPFADIECETFTNMTMTSNSLTVSSSENIDNFSGSSSLVNVRLDVTNGAKLFWETNVIFEG-DEETDLMVDGGAVYVGEGSTVRFLNDVQMQDIAIINERDEDSDFSSFVRSGGCVWTAGYFRVDGEATFTGCDISGAGESPPGPGGAVYVGETGSVLFNGGVTITDTHITDDFGGSGGGIYNLGKVNIKGDSRFEDISASSGVAIYNGEGATFNFRSGARAFFKDLNNRDSEGSALFNRGFFKFSGPALFFDAELPVIVAVDNSETIISEDSAFWTWDES--PGDALSVNDGADFTLPDSVTFVGFD 430
BLAST of mRNA_P-littoralis_Contig807.21.1 vs. uniprot
Match: D7FGT1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FGT1_ECTSI) HSP 1 Score: 445 bits (1145), Expect = 1.090e-149 Identity = 232/342 (67.84%), Postives = 280/342 (81.87%), Query Frame = 3
Query: 36 LLLLPGVCHGLVETCEDLQAAFELTKTQDVEVEMYPFADIECETYTNMTMTSNTLTVSSSENLENFNGNSKLTRVRIEVTNGAKLFWETNVVFGGVEEEDEINNDGGAVYVGEGSTVRFLNNLEMTDVGIINETKEDSDFAAFVRSGGCVWTNGYFRVDGTATFTGCEIVGAGESPPGPGGAIYVGEAGSVLFNKELVITETSITDDSGGKGGGIYNLGKVNIKGNSRFEEIQASNGGAIYNGENAKFTFRNGATAFFRDVSNRDAEGSALFNLGYFKFAGPALFVGAEDPVIVAGYSSETILSKNSVFWALDDSGFETEVISISDSAEITIPSSVIFVGYD 1061
LL L GV HGL+ETCEDLQAAF LT+TQDV E++PF DIECET+TNMTMTSNTLT++SSENL+NF G+S LT VR+ VTNGA+L WET+V F G +EE E+ DGGAV+VGEGSTV FLN+LEM D+ IINE EDSDFA+FVRSGGCVWT G F VDG ATFT C+I GAGESPPGPGGAIYVG GSV FN+ + I+ET ITDD GG+GGGIYNLG+V I G+SRFE+I AS+G AIYNGE A+F F N A+AFFRD++NRD+ GS L NLGYF+F+GPALFV A+ PVIVA +S+TILS+NS FW D+ E +S+ ++A+ TIP+SV+FVG++
Sbjct: 11 LLFLVGVAHGLIETCEDLQAAFNLTQTQDVIDEIHPFQDIECETFTNMTMTSNTLTLNSSENLDNFFGSSSLTNVRLVVTNGAELIWETHVNFIG-DEEVELMVDGGAVFVGEGSTVHFLNDLEMEDIRIINERDEDSDFASFVRSGGCVWTAGSFIVDGEATFTRCDITGAGESPPGPGGAIYVGATGSVSFNQGVAISETFITDDFGGQGGGIYNLGEVTIAGDSRFEDISASSGVAIYNGEGAEFYFTNDASAFFRDLNNRDSVGSGLTNLGYFEFSGPALFVEADAPVIVATETSQTILSENSAFWTFDEEF--GEALSVDEAADFTIPASVVFVGFE 349
BLAST of mRNA_P-littoralis_Contig807.21.1 vs. uniprot
Match: D7G1Q9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1Q9_ECTSI) HSP 1 Score: 444 bits (1141), Expect = 1.620e-149 Identity = 231/345 (66.96%), Postives = 270/345 (78.26%), Query Frame = 3
Query: 27 SAVLLLLPGVCHGLVETCEDLQAAFELTKTQDVEVEMYPFADIECETYTNMTMTSNTLTVSSSENLENFNGNSKLTRVRIEVTNGAKLFWETNVVFGGVEEEDEINNDGGAVYVGEGSTVRFLNNLEMTDVGIINETKEDSDFAAFVRSGGCVWTNGYFRVDGTATFTGCEIVGAGESPPGPGGAIYVGEAGSVLFNKELVITETSITDDSGGKGGGIYNLGKVNIKGNSRFEEIQASNGGAIYNGENAKFTFRNGATAFFRDVSNRDAEGSALFNLGYFKFAGPALFVGAEDPVIVAGYSSETILSKNSVFWALDDSGFETEVISISDSAEITIPSSVIFVGYD 1061
S LLL+PG CHGL+ETC+DL AAFE T+T+DV VEM+PFADIEC+T+TNMTMTSNTLT LFWETNV+F G +EE E+ DGGAVYVGEGSTVRFLN+++M DV IINE EDSDFA+FVRSGGCVWT GYFRVDG ATFTGC+I+GAGESPPGPGGA+YVGE GSVLFN+ + ITETSITDD GGKGGGIYNLGKVNIKG+SRFEEI AS G AIYNGE A F FRNGA AFFRD++NRD+EGSAL NLG+FKF+GPA F AE PVIVA +SETILS++S FW D+S + +++++ A+ T+P SV FVG+D
Sbjct: 8 SLALLLMPGTCHGLIETCDDLLAAFEQTQTEDVVVEMHPFADIECDTFTNMTMTSNTLT----------------------------LFWETNVIFEG-DEEAELMVDGGAVYVGEGSTVRFLNDVQMRDVVIINERDEDSDFASFVRSGGCVWTAGYFRVDGEATFTGCDIIGAGESPPGPGGAVYVGETGSVLFNEGVTITETSITDDFGGKGGGIYNLGKVNIKGDSRFEEISASAGVAIYNGEGATFNFRNGAGAFFRDLNNRDSEGSALVNLGFFKFSGPAFFFDAELPVIVAMDNSETILSEDSAFWTWDES--PGDALTVNEGADFTLPDSVTFVGFD 321
BLAST of mRNA_P-littoralis_Contig807.21.1 vs. uniprot
Match: D7G0Q4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0Q4_ECTSI) HSP 1 Score: 428 bits (1101), Expect = 4.910e-143 Identity = 220/344 (63.95%), Postives = 272/344 (79.07%), Query Frame = 3
Query: 27 SAVLLLLPGVCHGLVETCEDLQAAFELTKTQDVEVEMYPFADIECETYTNMTMTSNTLTVSSSENLENFNGNSKLTRVRIEVTNGAKLFWETNVVFGGVEEEDEINNDGGAVYVGEGSTVRFLNNLEMTDVGIINETKEDSDFAAFVRSGGCVWTNGYFRVDGTATFTGCEIVGAGESPPGPGGAIYVGEAGSVLFNKELVITETSITDDSGGKGGGIYNLGKVNIKGNSRFEEIQASNGGAIYNGENAKFTFRNGATAFFRDVSNRDAEGSALFNLGYFKFAGPALFVGAEDPVIVAGYSSETILSKNSVFWALDDSGFETEVISISDSAEITIPSSVIFVGY 1058
S LL++PGV GL+ETCEDLQAAFELT+TQDV E+ F DIEC +TNMTMTSNTLT++S+E+L +G++ L VR+EVTNGAKL WET+V F G +EE E N +GG V+VGEGSTVRFLN++++ DV I NE DSD A FVR GGCVWT G+FRVDG ATFT C I+G GESPPG GGA++V GSVLFN+ + I++T IT+D GG GGGI+NLGKVNIKG+SRFEE+ A +G AI+NGE+A F FRNGA+AFFRD+SNRD+EGSAL NLG+FKF+GP LFV AE PVIVA S TI+S++S FW ++ E IS++DSAE++IP SV FVG+
Sbjct: 8 SLALLVIPGVARGLIETCEDLQAAFELTQTQDVVDEISTFGDIECPMFTNMTMTSNTLTLNSAEDLSITSGSTSLINVRLEVTNGAKLVWETSVFFLG-DEEVENNVNGGGVFVGEGSTVRFLNDVQIRDVRITNERDGDSDNAVFVRDGGCVWTAGFFRVDGEATFTSCAIIGTGESPPGSGGAVFVDATGSVLFNQGVAISDTFITNDGGGDGGGIFNLGKVNIKGDSRFEELSARSGAAIFNGEDASFNFRNGASAFFRDLSNRDSEGSALVNLGFFKFSGPVLFVDAEAPVIVATEGSTTIISRDSAFWMFENDDVTGEAISVADSAEVSIPGSVSFVGF 350
BLAST of mRNA_P-littoralis_Contig807.21.1 vs. uniprot
Match: D7G2Y5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2Y5_ECTSI) HSP 1 Score: 300 bits (768), Expect = 6.760e-93 Identity = 172/356 (48.31%), Postives = 227/356 (63.76%), Query Frame = 3
Query: 9 LSAAAASAVLLLLPGVCHGLVETCEDLQAAFELTKTQDVEVEMYPFADIECETYTNMTMTSNTLTVSSSENLENFNGNSKLTRVRIEVTNGAKLFWETNVVFGGVEEEDEINNDGGAVYVGEGSTVRFLNNLEMTDVGIINETKEDSDFAAFVRSGGCVWTNGYFRVDGTATFTGCEIVGAGESPPGPGGAIYVGEAGSVLFNKELVITETSITDDSGGKGGGIYNLGKVNIKGNSRFEEIQASNGGAIYNGENAKFTFRNGATAFFRDVSNRDAEGSALFNLGYFKFAGPALFVGAEDPVIVAGYSSETILSKNSVFWALDDSGFETEVISISDSAEITIPSSVIFVGYDDDELG 1076
LS +A+A+LL+ VC G +ETC+DL AF LT +QDV VE+ P DI C+++T M+M++N+LTV + + G+ L VR EVT+GAKL W F G E +D +N GGAVYVGEGS+ RF + L ++VG+ + +E SDFA++ GGCV+ +GYFRV+G A+F GCE G GES PGPGG +YVGE GSVLF E+ + + SI DD G GGGIYNLGKVNIKGN+ F+ ++A GGAI+NG A+F F+ GATA F D + D G A+FN GYFK +GPA V P V G S T LS+ SVF D S + ++ + + +T V F D G
Sbjct: 4 LSKISAAALLLVSGSVCQGQLETCQDLLDAFALTASQDVVVEIQPGQDITCDSFTTMSMSANSLTVMTPDGQS---GSVGLNEVRFEVTDGAKLLWYPGASFTGTEYQD-VN--GGAVYVGEGSSARFYDTLTTSEVGVRSVPEEGSDFASYQLIGGCVYVDGYFRVEGHASFVGCENSGGGESSPGPGGVMYVGETGSVLFAGEVTMQDVSIIDDEGNNGGGIYNLGKVNIKGNAVFQNLRAEAGGAIFNGSGAEFRFKKGATADFIDCLSFDGIGGAVFNAGYFKLSGPAEVVECRAPTFVVGSSGYTRLSEGSVFNG-DGSDYPEPIMFVMEGGRLTGVGKVTFDNAADTGCG 352
BLAST of mRNA_P-littoralis_Contig807.21.1 vs. uniprot
Match: A0A6H5JYQ0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYQ0_9PHAE) HSP 1 Score: 295 bits (756), Expect = 3.310e-88 Identity = 171/355 (48.17%), Postives = 225/355 (63.38%), Query Frame = 3
Query: 3 KTLSAAAASAVLLLLPGVCHGLVETCEDLQAAFELTKTQDVEVEMYPFADIECETYTNMTMTSNTLTVSSSENLENFNGNSKLTRVRIEVTNGAKLFWETNVVFGGVEEEDEINNDGGAVYVGEGSTVRFLNNLEMTDVGIINETKEDSDFAAFVRSGGCV----WTNGYFRVDGTATFTGCEIVGAGESPPGPGGAIYVGEAGSVLFNKELVITETSITDDSGGKGGGIYNLGKVNIKGNSRFEEIQASNGGAIYNGENAKFTFRNGATAFFRDVSNRDAEGSALFNLGYFKFAGPALFVGAEDPVIVAGYSSETILSKNSVFWALDDSGFE--TEVISISDSAEITIPSSVIF 1049
K +A+A+LL+ VC G VETC+DL AF LT +QDV VE+ P DI C+ +T M+M++N+LTV++++ G+ L VR EVT+GAKLFW F E D + +GGAVYVGEGST RF + L ++VG+ + +E SDFA++ GGCV + +GYFRV+G A+F GCE G GES PGPGG +YVGE GSVLF E+ + + SI DD G GGGIYNLGKVNIKGN+ F+ ++A GGAI+NG A+F F+ GATA F D + D G A+FN GYFK +GPA V P V G S T LS+ SVF + G+E +I + + +T V F
Sbjct: 232 KNFGKISAAALLLVSGSVCRGQVETCQDLLDAFALTASQDVVVEIQPGQDITCDNFTTMSMSANSLTVTATDGQS---GSVGLNEVRFEVTDGAKLFWHPGASF---TETDYQDVNGGAVYVGEGSTARFYDTLTTSEVGVRSVPEEGSDFASYELIGGCVRAYTYVDGYFRVEGHASFVGCENSGGGESSPGPGGVMYVGETGSVLFAGEVTMQDVSIIDDEGNNGGGIYNLGKVNIKGNALFQNLRAEAGGAIFNGSGAEFRFKKGATADFIDCLSFDGTGGAVFNAGYFKLSGPAEVVECRAPTFVVGSSGYTRLSEGSVF---NGDGYEYPEPIILVREGGRLTGVGKVTF 577
BLAST of mRNA_P-littoralis_Contig807.21.1 vs. uniprot
Match: D8LG63_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LG63_ECTSI) HSP 1 Score: 229 bits (584), Expect = 4.100e-68 Identity = 115/167 (68.86%), Postives = 136/167 (81.44%), Query Frame = 3
Query: 408 MTDVGIINETKEDSDFAAFVRSGGCVWTNGYFRVDGTATFTGCEIVGAGESPPGPGGAIYVGEAGSVLFNKELVITETSITDDSGGKGGGIYNLGKVNIKGNSRFEEIQASNGGAIYNGENAKFTFRNGATAFFRDVSNRDAEGSALFNLGYFKFAGPALFVGAEDP 908
M DVGIINET EDSD+A++ SGGCV T G F V+G ATFTGCE VGAGES PGPGGAI+V E GSV F++ + I ETSITDD GG+GGGIYNLG+VN+ G SRFE+I AS+G A+YNGE A+ F NGATA FRD+SNRD+ GSAL+ LGYF+F+GPALFV A+ P
Sbjct: 1 MRDVGIINETDEDSDYASYQHSGGCVRTAGTFTVNGDATFTGCESVGAGESAPGPGGAIFVSETGSVSFSEGVTIMETSITDDFGGQGGGIYNLGEVNVAGGSRFEDISASSGVAVYNGEGAQLRFTNGATACFRDLSNRDSVGSALYYLGYFEFSGPALFVEADTP 167 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig807.21.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 7
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig807.21.1 >prot_P-littoralis_Contig807.21.1 ID=prot_P-littoralis_Contig807.21.1|Name=mRNA_P-littoralis_Contig807.21.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=316bp MYPFADIECETYTNMTMTSNTLTVSSSENLENFNGNSKLTRVRIEVTNGAback to top mRNA from alignment at P-littoralis_Contig807:117726..119629- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig807.21.1 ID=mRNA_P-littoralis_Contig807.21.1|Name=mRNA_P-littoralis_Contig807.21.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=1904bp|location=Sequence derived from alignment at P-littoralis_Contig807:117726..119629- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig807:117726..119629- >mRNA_P-littoralis_Contig807.21.1 ID=mRNA_P-littoralis_Contig807.21.1|Name=mRNA_P-littoralis_Contig807.21.1|organism=Pylaiella littoralis U1_48|type=CDS|length=948bp|location=Sequence derived from alignment at P-littoralis_Contig807:117726..119629- (Pylaiella littoralis U1_48)back to top |