prot_P-littoralis_Contig12.47.2 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig12.47.2
Unique Nameprot_P-littoralis_Contig12.47.2
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length229
Homology
BLAST of mRNA_P-littoralis_Contig12.47.2 vs. uniprot
Match: D8LAV1_ECTSI (Similar to syntaxin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LAV1_ECTSI)

HSP 1 Score: 184 bits (466), Expect = 8.090e-56
Identity = 98/128 (76.56%), Postives = 104/128 (81.25%), Query Frame = 0
Query:    1 MNDWKSP----AGGGGRKYRGPNGTAEKVDYSQLPIGGXXXXXXXXXXDDWIQRQIRGHKSQIENQDAHLSEIGQTATRLGSISLEISNELDQQNKMLNNVNADFEEAIGGLDAVTKKTQELIKKSAG 124
            MNDWK+P    AGGG R Y GPNGTAEKVDYS+LP             DDWIQRQIRGHKSQ+E+QDAHLSEIGQTA+RLG+ISLEIS ELDQQNKML NVN DFEEAIGGLDAVTKKTQELIKKS G
Sbjct:    1 MNDWKAPIGRGAGGGSRNYGGPNGTAEKVDYSRLP--NEAGPGDDGEGDDWIQRQIRGHKSQMEHQDAHLSEIGQTASRLGNISLEISKELDQQNKMLENVNTDFEEAIGGLDAVTKKTQELIKKSGG 126          
BLAST of mRNA_P-littoralis_Contig12.47.2 vs. uniprot
Match: A0A835YWI7_9STRA (t-SNARE coiled-coil homology domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YWI7_9STRA)

HSP 1 Score: 108 bits (269), Expect = 2.830e-26
Identity = 62/134 (46.27%), Postives = 80/134 (59.70%), Query Frame = 0
Query:    1 MNDWKSPAGGGGRKYRGPNGTAEKVDYSQLPIGGXXXXXXXXXXDDWIQRQIRGHKSQIENQDAHLSEIGQTATRLGSISLEISNELDQQNKMLNNVNADFEEAIGGLDAVTKKTQELIKKSAGRAVKCSAPVL 134
            MN+WK     GG    G +   +  DYS+LP             +DWI+RQ+R HK+Q+  QD HL +IG+   RLG ISLEIS ELD QNKML+ +  D++EAI G++ VTKKT+ELIK S G    C    L
Sbjct:    1 MNNWK-----GGSSRGGMSPYTDTPDYSRLPRN----TNASDDENDWIRRQVREHKTQVAEQDRHLEDIGRGVERLGEISLEISKELDGQNKMLSEMEVDYDEAIYGMEMVTKKTKELIKTSGGPRNFCIIAFL 125          
BLAST of mRNA_P-littoralis_Contig12.47.2 vs. uniprot
Match: A0A7S2P3Q0_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2P3Q0_9STRA)

HSP 1 Score: 88.6 bits (218), Expect = 9.530e-19
Identity = 48/103 (46.60%), Postives = 65/103 (63.11%), Query Frame = 0
Query:   27 YSQLPIGGXXXXXXXXXXDDWIQRQIRGHKSQIENQDAHLSEIGQTATRLGSISLEISNELDQQNKMLNNVNADFEEAIGGLDAVTKKTQELIKKSAGRAVKC 129
            Y Q+PI G          DD+IQRQI+  + Q++ QD  L  +  +ATRLG +S+ IS ELD QNKMLN++  D  +A   LD VT+KT+ELI+KS G+   C
Sbjct:   16 YQQVPISGDSDDSDND--DDFIQRQIKDQRQQLQKQDEGLEMLSLSATRLGELSMNISTELDAQNKMLNDMENDLSDATDNLDYVTRKTKELIQKSGGKKNFC 116          
BLAST of mRNA_P-littoralis_Contig12.47.2 vs. uniprot
Match: A0A7S4IM31_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4IM31_9STRA)

HSP 1 Score: 74.7 bits (182), Expect = 1.770e-13
Identity = 36/81 (44.44%), Postives = 57/81 (70.37%), Query Frame = 0
Query:   45 DDWIQRQIRGHKSQIENQDAHLSEIGQTATRLGSISLEISNELDQQNKMLNNVNADFEEAIGGLDAVTKKTQELIKKSAGR 125
            DD+I +Q+R  + Q++ QD  L  +GQ+A RLG +S+ I  EL QQNK+L+ +  D ++A   LD VT+KT+EL+++S G+
Sbjct:   31 DDFISQQVRNQRLQMKRQDEGLEMLGQSADRLGQLSMNIHEELGQQNKLLDEMEDDLDQATTRLDFVTQKTRELVQRSGGK 111          
BLAST of mRNA_P-littoralis_Contig12.47.2 vs. uniprot
Match: A0A225UWR2_9STRA (t-SNARE coiled-coil homology domain-containing protein n=17 Tax=Phytophthora TaxID=4783 RepID=A0A225UWR2_9STRA)

HSP 1 Score: 71.6 bits (174), Expect = 2.280e-12
Identity = 38/80 (47.50%), Postives = 54/80 (67.50%), Query Frame = 0
Query:   45 DDWIQRQIRGHKSQIENQDAHLSEIGQTATRLGSISLEISNELDQQNKMLNNVNADFEEAIGGLDAVTKKTQELIKKSAG 124
            DD++  Q R  + + + QD  L E+     RLG +SL IS+ELD QNKML+++N D ++A   L+ VTK+TQELIK+S G
Sbjct:   26 DDYVGEQRRSQQIERQKQDESLDELHSAVKRLGDMSLNISSELDTQNKMLDDLNDDTDKAKQALEIVTKQTQELIKQSGG 105          
BLAST of mRNA_P-littoralis_Contig12.47.2 vs. uniprot
Match: A0A3M6VA46_9STRA (t-SNARE coiled-coil homology domain-containing protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VA46_9STRA)

HSP 1 Score: 70.1 bits (170), Expect = 8.460e-12
Identity = 37/80 (46.25%), Postives = 54/80 (67.50%), Query Frame = 0
Query:   45 DDWIQRQIRGHKSQIENQDAHLSEIGQTATRLGSISLEISNELDQQNKMLNNVNADFEEAIGGLDAVTKKTQELIKKSAG 124
            DD++  Q R  + + + QD +L E+     RLG ISL IS+ELD QNKML++++ D ++A   L+ VTK+TQ LIK+S G
Sbjct:   25 DDYVTDQYRAQQVERQKQDENLDELHSAVKRLGDISLNISSELDTQNKMLDDLSDDTDKAKQALEVVTKQTQALIKQSGG 104          
BLAST of mRNA_P-littoralis_Contig12.47.2 vs. uniprot
Match: K3X1D9_GLOUD (t-SNARE coiled-coil homology domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X1D9_GLOUD)

HSP 1 Score: 68.6 bits (166), Expect = 3.200e-11
Identity = 36/80 (45.00%), Postives = 53/80 (66.25%), Query Frame = 0
Query:   45 DDWIQRQIRGHKSQIENQDAHLSEIGQTATRLGSISLEISNELDQQNKMLNNVNADFEEAIGGLDAVTKKTQELIKKSAG 124
            DD++QR+    + + E QD  L ++     RLG +SL IS ELD QN ML+++N + ++A   L AVTKKT+ELI++S G
Sbjct:   25 DDYVQRERNQQQVEREKQDESLDQLHTAVKRLGDMSLSISTELDSQNAMLDDLNEETDKASEALQAVTKKTKELIEQSGG 104          
BLAST of mRNA_P-littoralis_Contig12.47.2 vs. uniprot
Match: A0A0P1A685_PLAHL (Osmotic stress-sensitive mutant 1 n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1A685_PLAHL)

HSP 1 Score: 68.6 bits (166), Expect = 3.280e-11
Identity = 37/80 (46.25%), Postives = 55/80 (68.75%), Query Frame = 0
Query:   45 DDWIQRQIRGHKSQIENQDAHLSEIGQTATRLGSISLEISNELDQQNKMLNNVNADFEEAIGGLDAVTKKTQELIKKSAG 124
            D+++  Q R  + + + QD +L E+     RLG +SL IS ELD QNKML++++ D ++A   L+AVTK+TQELIK+S G
Sbjct:   26 DNFVADQRRTQQIERQKQDENLDELHSAVKRLGDMSLNISTELDTQNKMLDDLSDDTDKAKHALEAVTKQTQELIKQSGG 105          
BLAST of mRNA_P-littoralis_Contig12.47.2 vs. uniprot
Match: A0A5D6Y543_9STRA (t-SNARE coiled-coil homology domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y543_9STRA)

HSP 1 Score: 67.4 bits (163), Expect = 8.480e-11
Identity = 36/80 (45.00%), Postives = 51/80 (63.75%), Query Frame = 0
Query:   45 DDWIQRQIRGHKSQIENQDAHLSEIGQTATRLGSISLEISNELDQQNKMLNNVNADFEEAIGGLDAVTKKTQELIKKSAG 124
            DD++ R+    + + + QD  L E+     RLG +SL IS ELD QN ML+ +N D ++A   L AVTKKT+ELI++S G
Sbjct:   24 DDYVARERAQQQVERQKQDESLDELHTAVKRLGDMSLSISTELDSQNAMLDELNEDTDKASDALQAVTKKTKELIEQSGG 103          
BLAST of mRNA_P-littoralis_Contig12.47.2 vs. uniprot
Match: A0A7S4A8R5_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4A8R5_9STRA)

HSP 1 Score: 67.0 bits (162), Expect = 1.900e-10
Identity = 36/83 (43.37%), Postives = 50/83 (60.24%), Query Frame = 0
Query:   52 IRGHKSQIENQDAHLSEIGQTATRLGSISLEISNELDQQNKMLNNVNADFEEAIGGLDAVTKKTQELIKKSAGRAVKCSAPVL 134
            IR  +  ++ QDA L  + Q+  RLG +S  IS EL QQNKML ++  D +EA   LD VT+ T+ELI +S G +  C   +L
Sbjct:   52 IRNQQIMMQQQDAGLDLLSQSVIRLGEMSTNISEELGQQNKMLESMETDLDEAGDELDIVTRSTKELIARSGGMSTFCLIAIL 134          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig12.47.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 20
Match NameE-valueIdentityDescription
D8LAV1_ECTSI8.090e-5676.56Similar to syntaxin n=1 Tax=Ectocarpus siliculosus... [more]
A0A835YWI7_9STRA2.830e-2646.27t-SNARE coiled-coil homology domain-containing pro... [more]
A0A7S2P3Q0_9STRA9.530e-1946.60Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
A0A7S4IM31_9STRA1.770e-1344.44Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
A0A225UWR2_9STRA2.280e-1247.50t-SNARE coiled-coil homology domain-containing pro... [more]
A0A3M6VA46_9STRA8.460e-1246.25t-SNARE coiled-coil homology domain-containing pro... [more]
K3X1D9_GLOUD3.200e-1145.00t-SNARE coiled-coil homology domain-containing pro... [more]
A0A0P1A685_PLAHL3.280e-1146.25Osmotic stress-sensitive mutant 1 n=1 Tax=Plasmopa... [more]
A0A5D6Y543_9STRA8.480e-1145.00t-SNARE coiled-coil homology domain-containing pro... [more]
A0A7S4A8R5_9STRA1.900e-1043.37Hypothetical protein n=1 Tax=Pseudo-nitzschia aust... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 84..104
NoneNo IPR availableGENE3D1.20.5.110coord: 56..118
e-value: 1.1E-13
score: 53.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..48
NoneNo IPR availablePANTHERPTHR12791:SF47SYNTAXINcoord: 47..122
NoneNo IPR availableCDDcd15841SNARE_Qccoord: 59..117
e-value: 9.75328E-16
score: 67.1984
NoneNo IPR availableSUPERFAMILY58038SNARE fusion complexcoord: 55..118
IPR000727Target SNARE coiled-coil homology domainSMARTSM00397tSNARE_6coord: 51..118
e-value: 3.7E-5
score: 33.1
IPR000727Target SNARE coiled-coil homology domainPROSITEPS50192T_SNAREcoord: 56..118
score: 13.725183
IPR039897BET1-like proteinPANTHERPTHR12791GOLGI SNARE BET1-RELATEDcoord: 47..122

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig12contigP-littoralis_Contig12:228234..232214 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig12.47.2mRNA_P-littoralis_Contig12.47.2Pylaiella littoralis U1_48mRNAP-littoralis_Contig12 228185..233538 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig12.47.2 ID=prot_P-littoralis_Contig12.47.2|Name=mRNA_P-littoralis_Contig12.47.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=229bp
MNDWKSPAGGGGRKYRGPNGTAEKVDYSQLPIGGGGSDDDDGGNDDWIQR
QIRGHKSQIENQDAHLSEIGQTATRLGSISLEISNELDQQNKMLNNVNAD
FEEAIGGLDAVTKKTQELIKKSAGRAVKCSAPVLWSHAQPTLSFPSGSGW
TGPPTASKGVGAEGGGGMNAPAERHSIPSDMKVSKRRVSFAAARPKHPAI
GQLPSCYCFYGHDAPSSLVSPRACPRAR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000727T_SNARE_dom
IPR039897BET1