mRNA_P-littoralis_Contig10.103.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig10.103.1
Unique NamemRNA_P-littoralis_Contig10.103.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
[Close]
BLAST of mRNA_P-littoralis_Contig10.103.1 vs. uniprot
Match: D7FQD7_ECTSI (PAP_fibrillin domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQD7_ECTSI)

HSP 1 Score: 425 bits (1093), Expect = 4.030e-143
Identity = 229/289 (79.24%), Postives = 254/289 (87.89%), Query Frame = 3 
Query:  123 MRLLSYMVLPQLVRLTANGFALGPAAGTGRGIELRNQNQHKRFSSTSHARRNVVVTGTSMSSVSTPADVDEVTVIKNSLLQVAAITERGQLATEAQRGDMDLLVERLEELKADQQLEPFKDEDMVGIWTLVYSSSQAFRSSPFFATFQALLGKEGVAERIFSYTDAFPNAKIGQARQIVNEDCTELLSRVEMSVWPHRWISGVVETRSKIVNDNVGDRLEVIVDDTRVSDSVLGKISPRLEELRVPVDQLSERLFDRIPRITLETVFLDQDLRVTRLPDRNFLIYVKDY 989
            MRLL   +L +LV L A GF L P  G+GR I   N+  H R  S    +    V  T MSSV TPADVDE+T+IKNSLLQVAA+TERGQLATEAQ+ DMDLL+ERLEELKA++ LEP+KDE+MVG WTLVYSSSQAFRSSPFFATFQAL+GK+GVAERIFS+TDAFPNAKIGQARQIVNEDCTELLSRVEMSVWPHRWISGVVETRSKIVND++GD+LEVIVDDTRVSDS+LGKISPRLEE+RVPVDQLSERLFDRIPRITL+TVFLDQDLRV+RLPDRNFL+YVKDY
Sbjct:    1 MRLLLCFLLARLVSLAA-GFGLRPGMGSGRSITAGNR--HTRHFSCCDGKH---VLTTRMSSVGTPADVDEITLIKNSLLQVAAMTERGQLATEAQQNDMDLLLERLEELKAEELLEPYKDENMVGTWTLVYSSSQAFRSSPFFATFQALIGKDGVAERIFSFTDAFPNAKIGQARQIVNEDCTELLSRVEMSVWPHRWISGVVETRSKIVNDDIGDQLEVIVDDTRVSDSILGKISPRLEEVRVPVDQLSERLFDRIPRITLDTVFLDQDLRVSRLPDRNFLVYVKDY 283
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BLAST of mRNA_P-littoralis_Contig10.103.1 vs. uniprot
Match: A0A835ZIJ0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZIJ0_9STRA)

HSP 1 Score: 160 bits (404), Expect = 5.270e-42
Identity = 90/198 (45.45%), Postives = 125/198 (63.13%), Query Frame = 3 
Query:  408 QRGDMDLLVERLEELKADQQLEPFKDEDMVGIWTLVYSSSQAFRSSPFFATFQALLGKEGVAERIFSYTDAFPNAKIGQARQIV----NEDCTELLSRVEMSVWPHRWISGVVETRSKIVNDNVGDRLEVIVDDTRVSDSVLGKISP-RLEELRVPVDQLSERLFDRIPRITLETVFLDQDLRVTRLPDRNFLIYVKD 986
            QR D++LLV RL+EL   +  EPF  +DM+G WTLVYSS + FR  P FA  QAL G      R++    A P A++G  +Q +     E   +    + + V+P  ++ G +ET ++IVND++GD LEVIV+ + V++S L +  P +     VPV +LSER FDR+PR+ LET++LD D RVTRLPD   LIYVKD
Sbjct:    2 QRDDVELLVTRLQELVPAE--EPFNGDDMLGSWTLVYSSGEVFRGDPVFAHIQALAGNPLWPNRVYRMAGAMPTARVGTVQQTIAAGGEEGRCKRCLVIRLEVFPWNYLQGTIETEARIVNDDIGDGLEVIVERSAVTESPLTRFWPGKNGPPAVPVARLSERFFDRLPRLALETLYLDSDFRVTRLPDDTLLIYVKD 197
[Close]
BLAST of mRNA_P-littoralis_Contig10.103.1 vs. uniprot
Match: A0A7S0WSZ6_9CHLO (Hypothetical protein n=1 Tax=Chlamydomonas leiostraca TaxID=1034604 RepID=A0A7S0WSZ6_9CHLO)

HSP 1 Score: 107 bits (267), Expect = 1.860e-22
Identity = 79/216 (36.57%), Postives = 122/216 (56.48%), Query Frame = 3 
Query:  345 IKNSLLQVAAITERGQLATEAQRGDMDLLVERLEELKADQQLEPFKDEDMVGIWTLVYSSSQAFRSSPFFATFQ-ALLGKEGVAERIFSYTDAFPNAKIGQARQIVNEDCTELLSRVEMSVWPHRWISGVVETRSKIVNDNVGDRLEVIVDDTRVSDSVLGKISPRLEELRVPVDQLSERLFDR-IPRITLETVFLDQDLRVTRL-PDRNFLIYVK 983
            +K  LL+  A  +RGQ+ATE+Q+ ++++++ +LE  +A    +    E + G W LVY+S +AFRSSPFF  FQ  L+G E +A  IF +TDA P A +GQA Q  + +  E +S V++ V+P     G V T S +        L + V++TRV+ S L  +   L+ + VPV  + E +  R    ++ +  FLD +LRV R  PD    +Y K
Sbjct:   39 LKKVLLRHVAGIDRGQVATESQKQEIEMVISQLEASQAPMSEQLEVQEALQGKWQLVYTSVEAFRSSPFFWAFQEGLVGSEELASAIFKFTDAIPGATVGQAFQTFDFNTGECVSEVDLEVFPGA--KGCVVTTSTVRCSTPPTCLVLTVENTRVARSNL--LPFLLDSVVVPVKDVVEAVRGRGKTAVSADMTFLDGELRVARTRPDGAIFVYRK 250
[Close]
BLAST of mRNA_P-littoralis_Contig10.103.1 vs. uniprot
Match: A0A7R9UZ95_9CHLO (Hypothetical protein n=1 Tax=Chlamydomonas euryale TaxID=1486919 RepID=A0A7R9UZ95_9CHLO)

HSP 1 Score: 98.6 bits (244), Expect = 5.500e-20
Identity = 72/168 (42.86%), Postives = 94/168 (55.95%), Query Frame = 3 
Query:  498 GIWTLVYSSSQAFRSSPFFATFQA--LLGKEGVAERIFSYTDAFPNAKIGQARQIVNEDCTELLSRVEMSVWPHRWI---SGVVETRSKIVNDNVGDRLEVIVDDTRVSDS-VLGKISPRLEELRVPVDQLSERLFDR-IPRITLETVFLDQDLRVTR-LPDRNFLIY 977
            G W LVYSS +AFRSSPFF  FQ   L G   +A  IF+YTD+ P A IG ARQ ++     L+S V+++V P   +   SG V T   I   +   RL V V DTRVS S V G++   L++L VPV  + E L      R  + T +LD  LRV R LP++   +Y
Sbjct:   29 GTWELVYSSVEAFRSSPFFWAFQEGLLAGNVNLASAIFAYTDSVPGATIGSARQTIDTSFGTLVSEVDLTVTPLPGLPGASGAVVTGCDIDASSGDGRLVVTVTDTRVSGSNVAGQL---LDQLSVPVKDIFEALRGSGAARTEVTTTYLDDTLRVMRVLPNKELFVY 193
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BLAST of mRNA_P-littoralis_Contig10.103.1 vs. uniprot
Match: A0A0D2KT63_9CHLO (Uncharacterized protein n=1 Tax=Monoraphidium neglectum TaxID=145388 RepID=A0A0D2KT63_9CHLO)

HSP 1 Score: 95.9 bits (237), Expect = 7.560e-18
Identity = 69/174 (39.66%), Postives = 98/174 (56.32%), Query Frame = 3 
Query:  498 GIWTLVYSSSQAFRSSPFFATFQALL-------GKEG--------VAERIFSYTDAFPNAKIGQARQIVNEDCTELLSRVEMSVWPHRWISGVVETRSKIVNDNVGDR-------LEVIVDDTRVSDSVLGKISPRLEELRVPVDQLSERLF-DRIPRITLETVFLDQDLRVTR 950
            G W L+Y++++AFR+SPFFA+F  ++       G  G        +A+ IF++TDA P A IG A QI+      L+S V++SV+P   + G V TRS++               LE+ V+ TRV  S     SP L+++ VPV+QL ERL      R+T E  FLDQ+LRVTR
Sbjct:  163 GRWELLYANTEAFRNSPFFASFSNVVSGLADVAGLSGTIDVPNGALADAIFAFTDAIPGATIGAAYQIITPGA--LVSEVDLSVFPG--LRGTVVTRSRLERPATAGGAGGAPQVLELFVESTRVERS---NFSPLLDQVSVPVEQLIERLRGSEAARVTYEVTFLDQNLRVTR 329
[Close]
BLAST of mRNA_P-littoralis_Contig10.103.1 vs. uniprot
Match: A0A5J4Z5Z5_PORPP (Light-induced protein, chloroplastic n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z5Z5_PORPP)

HSP 1 Score: 91.7 bits (226), Expect = 4.580e-16
Identity = 70/216 (32.41%), Postives = 117/216 (54.17%), Query Frame = 3 
Query:  342 VIKNSLLQVAAITERGQLATEAQRGDMDLLVERLEELKADQQLEPFKDEDMVGIWTLVYSSSQAFRSSPFFATFQALLGKEGVAERIFSYTDAFPNAKIGQARQIVNEDCTELLSRVEMSVWPHRWISGVVETRSKIVNDNVGDRLEVIVDDTRVSD-SVLGKISPRLEELRVPVDQLSERLFDRIPRITLETVFLDQDLRVTRLPDRNFLIYVKD 986
            V+K  L+ +AA + RGQ A+  QR  +++L +RLEEL  +   +P     + G+W L+YSS+Q +++SPF      LLG             A P  ++G  RQ +  D  E ++ V ++ +P   ISG V T  +I   + G RLE  V+ T +   S+ G++   + ++ +PV Q+ ERL   +P    +TV+LD  +R++R  +    I+VK+
Sbjct:  224 VLKTRLVTLAAASNRGQSASVTQRDLIEVLAKRLEELNPNP--DPVDMPMIDGVWDLIYSSTQLYKTSPF------LLGA------------ATPLVQVGLVRQTIFVDSGEAINEVSVTSFPA--ISGRVITTMRIAPVS-GKRLECKVEKTELKGGSIAGRLDIGMLDVDIPVQQVVERLNGTVPETFFDTVYLDDLMRISRSKNGALYIFVKE 416
[Close]
BLAST of mRNA_P-littoralis_Contig10.103.1 vs. uniprot
Match: A0A7S2Q3I4_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2Q3I4_9STRA)

HSP 1 Score: 89.4 bits (220), Expect = 5.130e-16
Identity = 72/225 (32.00%), Postives = 125/225 (55.56%), Query Frame = 3 
Query:  345 IKNSLLQVAAITERGQLATEAQRGDMDLLVERLEELKADQQLEPFKDE--DMVGIWTLVYSSSQAFRSSPFFATFQALLGKEG--VAERIFSYTDAFPNA-KIGQARQIVNEDCTELLSRVEMSVW-----PHRWISGVVETRSKIVNDNVGDRLEVIVDDTRVSDSVLGKISPRLEE--LRVPVDQLSERLFDRIPRITLETVFLDQDLRVTRLPDRNFLIYVK 983
            +K  L+ ++++T RG  AT     + +L+V+ + +L+A   L P  D   +  G W L YSS+Q+FRSSPFF   ++ LG +   +AE  F   DA   A ++G+ RQI++++  EL+S  E+SV      P + + G V T +++      +  E+ V  T+V  S +  +   L++  L VPV +  + +   +P  TL+T ++D+ LR+TR  D NF ++ +
Sbjct:   66 LKRELILLSSVTNRGSCATTE---ESNLVVDLVTQLEA---LNPTADPAANCQGDWELCYSSTQSFRSSPFFLAIRSFLGDDNKQIAESAFDIHDAATTASRVGKVRQIIDKNNNELVSEYEVSVGLLPGLPVQ-VKGTVITSAEMSVIRP-ESWELEVKGTKVKGSNVPFLDAFLDDSDLEVPVGEAYKAVSGAVPVSTLKTFYVDEGLRITRDVDENFYVFTR 282
[Close]
BLAST of mRNA_P-littoralis_Contig10.103.1 vs. uniprot
Match: A0A1E7FER3_9STRA (PAP_fibrillin domain-containing protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FER3_9STRA)

HSP 1 Score: 88.2 bits (217), Expect = 1.250e-15
Identity = 72/227 (31.72%), Postives = 131/227 (57.71%), Query Frame = 3 
Query:  345 IKNSLLQVAAITERGQLATEAQRGDMDLLVERLEELKADQQLEPFKD--EDMVGIWTLVYSSSQAFRSSPFFATFQALLGKEG--VAERIFS-YTDAFPNAKIGQARQIVNEDCTELLSRVEMSVWPHRWI----SGVVETRSKIVNDNVGDR-LEVIVDDTRVSDSVLGKISPRLEELRV--PV-DQLSERLFDRIPRITLETVFLDQDLRVTRLPDRNFLIYVKD 986
            +K  LL +A++T+RG  A++ +R   D++++ + +L+A   L P ++      G W L YSS+Q FRSSPFF + +  +G E   + E  F+ +  A   +++G+ RQIV  D  +L+S V + V     I     G V T + +  D V D+  E+ +++T+V+ S +  I+  +++L+V  PV D  S  +  ++P I + T ++D+ LR+TR  D NF +++++
Sbjct:   64 LKRELLLLASVTDRGAFASKEER---DIVIDLVAQLEA---LNPTRNPASHCEGEWDLCYSSTQFFRSSPFFQSIRVAVGDENKDMTENGFALHEQATMGSRVGRVRQIVTSD-NKLISEVSLEVGTLPGIPISLQGTVVTTASL--DVVSDKNWELQIENTKVTGSNIPFINMFMDDLQVELPVGDFYSTVMSGKVPVIPMTTFYVDEALRITRDIDENFFVFIRE 281
[Close]
BLAST of mRNA_P-littoralis_Contig10.103.1 vs. uniprot
Match: A0A7S2Y236_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2Y236_9STRA)

HSP 1 Score: 88.2 bits (217), Expect = 1.630e-15
Identity = 87/297 (29.29%), Postives = 145/297 (48.82%), Query Frame = 3 
Query:  147 LPQLVRLTANGFALGPAAGTGRGIELRNQNQ----HKRFSSTSHARRNVVVTGTSMSSVSTPADVDEVTVI-----KNSLLQVAAITERGQLATEAQRGDMDLLVERLEELKADQQLEPFKDEDMV--GIWTLVYSSSQAFRSSPFFATFQALLG--KEGVAERIFSYTDAFPNA-KIGQARQIVNEDCTELLSRVEMSVWPHR--WISGVVETRSKIVNDNVGDRLEVIVDDTRVSDSVLGKISPRLEELRV--PVDQLSERLFDRIPRITLETVFLDQDLRVTRLPDRNFLIYVK 983
            L  LV L+ N  A  P   TG  I L ++       K F+    +  +       +S+     D+DE   I     K  LL +++++ RG+ A+     D +++ + + +L+A   L P +D  M   G W L  SS+Q FRSSPFF T +A +G   + +AE  F   D    A +IG+ RQ +  D       +E+ V+P     + G V TR+        +  E+ V  T V  S +  ++  L+ L++  PV+Q+ ER+   +P + L+T ++D+ +R+TR  D NF +Y +
Sbjct:    9 LALLVLLSTNADAFAPCGRTGTSIGLSSERNVPVGSKLFTYYDESSPSDYDEDDLVSAKGVEVDMDEGDDIIRDELKRELLLLSSVSNRGEFAS---LDDQNVITDLVAQLEA---LNPTEDPAMKCEGEWDLALSSTQFFRSSPFFLTIRAAMGASNKAMAENAFDIHDRATTAGRIGRVRQTIVGDTLTSEVDLEVGVFPGLPFRVKGSVITRASF-RPVSSETAELQVGATEVKGSNIPILNQYLDNLKLELPVNQIFERIQGSVPTVELKTYYIDEGMRITRDMDDNFFVYTR 298
[Close]
BLAST of mRNA_P-littoralis_Contig10.103.1 vs. uniprot
Match: A0A2V3IV97_9FLOR (Chromoplast-specific carotenoid-associated protein C1, chromoplastic n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IV97_9FLOR)

HSP 1 Score: 87.0 bits (214), Expect = 2.780e-15
Identity = 68/213 (31.92%), Postives = 113/213 (53.05%), Query Frame = 3 
Query:  357 LLQVAAITERGQLATEAQRGDMDLLVERLEELKADQQLEPFKDEDMVGIWTLVYSSSQAFRSSPFFATFQALLGKEGVAERIFSYTDAFPNAKIGQARQIVNEDCTELLSRVEMSVWPHRWISGVVETRSKIVNDNVGDRLEVIVDDTRVSDSVLGKISPRLE----ELRVPVDQLSERLFDRIPRITLETVFLDQDLRVTRLPDRNFLIYVK 983
            LLQ AAIT+RGQ AT+AQ   +D +V  LEE+  + Q  P + + + G W LVY++++ F+++PF                      A P  ++GQ RQ ++ D  +L + VE+  +P    S  V+T  +I      +RLEV V+ T ++    GKI+ R++       VPV+Q+  R+ +  P   ++T +LD+ LR++R  +    IY +
Sbjct:   88 LLQYAAITDRGQSATDAQVSAVDDIVMSLEEVNPNPQ--PVEIDLIDGEWNLVYTAAKLFQTNPFLMA------------------AATPLLQVGQVRQRISVDEGKLSTEVEVIAFPVT--SWTVKTTGRITPVGA-ERLEVTVETTNITG---GKIADRIDLGGISFDVPVEQIYSRIRNASPETYVDTYYLDETLRISRSKEGKLYIYTR 274
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig10.103.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FQD7_ECTSI4.030e-14379.24PAP_fibrillin domain-containing protein n=2 Tax=Ec... [more]
A0A835ZIJ0_9STRA5.270e-4245.45Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S0WSZ6_9CHLO1.860e-2236.57Hypothetical protein n=1 Tax=Chlamydomonas leiostr... [more]
A0A7R9UZ95_9CHLO5.500e-2042.86Hypothetical protein n=1 Tax=Chlamydomonas euryale... [more]
A0A0D2KT63_9CHLO7.560e-1839.66Uncharacterized protein n=1 Tax=Monoraphidium negl... [more]
A0A5J4Z5Z5_PORPP4.580e-1632.41Light-induced protein, chloroplastic n=1 Tax=Porph... [more]
A0A7S2Q3I4_9STRA5.130e-1632.00Hypothetical protein n=1 Tax=Skeletonema marinoi T... [more]
A0A1E7FER3_9STRA1.250e-1531.72PAP_fibrillin domain-containing protein n=1 Tax=Fr... [more]
A0A7S2Y236_9STRA1.630e-1529.29Hypothetical protein n=1 Tax=Amphiprora paludosa T... [more]
A0A2V3IV97_9FLOR2.780e-1531.92Chromoplast-specific carotenoid-associated protein... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig10contigP-littoralis_Contig10:433887..441034 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FQD7
PFAMsPAP_fibrillin
Model size1847
Max annot lvl2759|Eukaryota
Hectar predicted targeting categorysignal peptide
Exons7
Evalue6.24e-149
EggNOG OGs2CY64@1|root,2S2BE@2759|Eukaryota
Ec32 ortholog descriptionPlastid lipid-associated protein/fibrillin conserved domain
Ec32 orthologEc-01_006500.1
DescriptionPAP_fibrillin
Cds size870
COG categoryS
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig10.103.1prot_P-littoralis_Contig10.103.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig10 434009..440179 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789331.7038803-UTR-P-littoralis_Contig10:433886..4340081680789331.7038803-UTR-P-littoralis_Contig10:433886..434008Pylaiella littoralis U1_48UTRP-littoralis_Contig10 433887..434008 +
1680789331.788869-UTR-P-littoralis_Contig10:440179..4410341680789331.788869-UTR-P-littoralis_Contig10:440179..441034Pylaiella littoralis U1_48UTRP-littoralis_Contig10 440180..441034 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789331.7178855-CDS-P-littoralis_Contig10:434008..4340491680789331.7178855-CDS-P-littoralis_Contig10:434008..434049Pylaiella littoralis U1_48CDSP-littoralis_Contig10 434009..434049 +
1680789331.7278485-CDS-P-littoralis_Contig10:435088..4352031680789331.7278485-CDS-P-littoralis_Contig10:435088..435203Pylaiella littoralis U1_48CDSP-littoralis_Contig10 435089..435203 +
1680789331.7359238-CDS-P-littoralis_Contig10:436169..4362561680789331.7359238-CDS-P-littoralis_Contig10:436169..436256Pylaiella littoralis U1_48CDSP-littoralis_Contig10 436170..436256 +
1680789331.7486455-CDS-P-littoralis_Contig10:436751..4368801680789331.7486455-CDS-P-littoralis_Contig10:436751..436880Pylaiella littoralis U1_48CDSP-littoralis_Contig10 436752..436880 +
1680789331.7613928-CDS-P-littoralis_Contig10:437482..4377031680789331.7613928-CDS-P-littoralis_Contig10:437482..437703Pylaiella littoralis U1_48CDSP-littoralis_Contig10 437483..437703 +
1680789331.772434-CDS-P-littoralis_Contig10:438097..4382621680789331.772434-CDS-P-littoralis_Contig10:438097..438262Pylaiella littoralis U1_48CDSP-littoralis_Contig10 438098..438262 +
1680789331.7808232-CDS-P-littoralis_Contig10:440067..4401791680789331.7808232-CDS-P-littoralis_Contig10:440067..440179Pylaiella littoralis U1_48CDSP-littoralis_Contig10 440068..440179 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig10.103.1

>prot_P-littoralis_Contig10.103.1 ID=prot_P-littoralis_Contig10.103.1|Name=mRNA_P-littoralis_Contig10.103.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=290bp
MRLLSYMVLPQLVRLTANGFALGPAAGTGRGIELRNQNQHKRFSSTSHAR
RNVVVTGTSMSSVSTPADVDEVTVIKNSLLQVAAITERGQLATEAQRGDM
DLLVERLEELKADQQLEPFKDEDMVGIWTLVYSSSQAFRSSPFFATFQAL
LGKEGVAERIFSYTDAFPNAKIGQARQIVNEDCTELLSRVEMSVWPHRWI
SGVVETRSKIVNDNVGDRLEVIVDDTRVSDSVLGKISPRLEELRVPVDQL
SERLFDRIPRITLETVFLDQDLRVTRLPDRNFLIYVKDY*
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mRNA from alignment at P-littoralis_Contig10:433887..441034+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig10.103.1 ID=mRNA_P-littoralis_Contig10.103.1|Name=mRNA_P-littoralis_Contig10.103.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=7148bp|location=Sequence derived from alignment at P-littoralis_Contig10:433887..441034+ (Pylaiella littoralis U1_48)
GTTGGTTTGTTGGGTTGGGTTTAGCGGGCTTCTTCTGTGTGTGTACGAGT
ATTTGTCACAACGCAGGTGCCGCTGCCTCACGCTTCCTCTCTTCTCGCAC
GACAACTCCTCTGGAATACATCATGCGGCTACTCTCGTATATGGTCCTCC
CACAGCTCGTCAGGTGAGAGGATGATCGCAGCTCGTAGACAGTTGGAGTG
CAAGGAGGATACACGAACCAAGCTGACAGTCCCGCATGATACGGACGCAG
GGCTGCCACGTCTCGCCTGTTCATCTCTCTCTCTCCCTCTCTCCCTTTCG
TTCTCTCTCTCTCTTTCCCTCTCCCTCTCTCTGTTCATGTCTCTCCCCTG
ATATCCCGGCTCCAGCCCAAGTGGACATCTAGGCGATAATTATCCACAAC
GTCAATATGCTATAATACAACGGTTGTGTCGTTTGTTTGTGTATCTTGCT
CTCTACCCGCCATTCTGCCTGTTCCTGCCATCTGTTATGGTTTCTAACAT
TTCCACATTTCACGTTTGACTTTCAACGAGAACCGATCTCTGAGGCAAGA
AACGCCATTTTTAAGGCCCGGCAGGGTCAATAAACATATCGCTTAGACGG
TCCAATTAACAGAGACAGAAAGGCATCGCAATTATAGACAGCATCTGATC
GCTCACCGTAATTGTCGATGAAGATATCGCACCCCAGGGCTGAAACGATT
TTCGAAGCTCAAGCACAAAAGCACCAAGCAGTACTCTGCAGCGGCTACTC
ACAAACAGAGTGCCTGGACTGAAAGGATAATCGATCAGCGTTGGAACCGT
CTGGCCGAGAGATTACAAAAGGTGTAGACATCGTTTGATGTTGGCACCGT
CTCCGTCGTTGAGTAAGTACTGCAAGCACCGCCTTCTTTGCGGAGCAAGT
CAGCACTATTATCGGTCGAGGTATAATATCATATGTATGTTGGAGGTAAG
CTTTCTTCGCCGTGGAGTAATCGACCTTTCAAAGGCGGCTTAGGGGGATG
TGGTATATCGTGCGATCTAAGCACACACATCTTACACGACATCACATGAC
ACATACGCGCGTGCACGTACCTGATACTGCTGTGCGGTACGGAGAACTCG
TACGCTTGTACAGCAGTACTGTGATGTATGTTGCGTTCGTACTGCTGTAT
GTACGCCCGCGTTATCTCGTTCGACGGGTGGTTGGTACTGTGTCGATGTC
AGGTTGACGGCCAACGGATTCGCCCTCGGACCGGCAGCGGGGACGGGGAG
AGGCATCGAGCTTCGGAACCAAAATCAGCACAAGCGCTTTTCCTCTACTT
CACACGCCAGAAGAAATGTGTGTACACGTCACGACTAAGTGGGGGCATCA
CCGTGCGTAGTACTGCTACATGGATGGCAGAAAATATTAAAAAAATCTTC
GCATGGATGATGAAATACCCTCTGCTGTCGTGTGCGCAGGTCGCACAATA
TGTTTGTTTGTTTTGAGCTGTGCCAGTTTACAGGAAGCGCACGTCCCCAA
ATATGGACGTTGATCCTCGTCGGTATTTTCTACCACCTGCGACAGGCGGT
GTCTGTCTGGTTGTCTTTTTTCGAAAAGTGCGCGTGTGACTGACAAAGGC
GCTCCGCTCATGATGTTTGTTGTCATCCTGTATACTCGTCTGTTTTTTAT
TAAAGCTGGCTTTGACGCCGACGATTTTTTGTTCGACATGCGCACGCAGA
CCTGTCACGATACAGCGTGAAACCGTACATCCAGATGCCGAGAATCTGAA
ACCGCAATACGAGCTTTTCGTGGTACAAATCTCTGGGGTACGGAACACAA
GTACCAGTGTATATTTTCATCGAAAAAGTGTTCATTCTCAATCGAACATG
GTAACACAGATTGTTCAAAAACAAGCCTCTCGTCAACCTATTCCTCGTCA
AACGCCTCAAATAAGCAGAACACACCATATAGCTATGACCTGCGTGTTGG
TACGCTCATATCTGCTGTTGAGGCTGAGATGTCGGAGGTTGAAATTATGG
TTCAGGCAGTCCAGAAACCTTCGGCATGTCAGCCAGACCCCAAACATGCT
GTACTCTTCGCCACGGACCTCATCTCTTGAACGGCGGGTCGACAACAGTA
GCTAAAGGTAGAAGAGAGACTTATTTCTGAACAACTGTGTTATCGTCGAG
GGGTGAGACTTGATTTTTTTTATAAAAAACAACAAGGATATTTTCATATT
TTCTGGACCAGACCCTCAACGCCCACCGTACGTCGTCTCACTGTCGCTGC
TGCTCCTGATGTTTCCGATCAATGTTTTTGGAGGTCGTCGTCACAGGCAC
AAGTATGAGTTCGGTGAGCACACCTGCTGATGTCGATGAGGTCACTGTCA
TCAAGAACTCGCTTCTCCAGGTCAGTGAGACAGCGACCTACCGTGCGCCA
GATAAGCCCCCGCACACGGATACCAAATACGTTGACTGATGTGTGTGTTG
TCATTCCGCCTGTTCTGCATATCAGTCTACGCCTCACGGTAGAAGTGGGG
CGCACCGGAGTCACACTCGATGCACAGGGTATCCGATAAAGTACGAATGA
ATGTGCTATCGTGGGGTAGCTCCGGGAGGTGCACACCAAAAGCAAAATAA
AATGCAGAGCCACTTCTGTGCTGCTCTTCTCCTAGCTGTCGCCCTGTTCC
CGTTGGTCTATATTTATGTTCCCGTTGATGTACAGCCTGGAAGTGTGGCA
GAGGAGGTTTCGTAGTTGGGGTGAAGTGAGAACCAACAAGGCATCCAGAC
AGCCACTGCTGCTGCTACGGAACCCGCGAATACATCCGCAATGTACGTGC
GCGCGGAGGTACTTGCCGCTCTTGAAAATACCCTTTAAATTGAAATACTC
TGCTCCCAAACCAAGGTGGCGGCCATAACAGAACGCGGCCAGCTAGCAAC
GGAGGCCCAGCGAGGCGACATGGACCTTTTAGTCGAGCGTCTGGAGGAGC
TCAAGGCAGACCAGCAGCTTGAGCCCTTCAAGGACGAGGACATGGTGATT
TCGTGATCTTTTGTGCAATGCGTTCATGGAATTGTCTGCTTTATGATACG
ACAAAGTGATGAATTCCATATCGTATGATACGTCAAAGTACATATCTGCT
GTGTTTTGGGCTGTTCTGTATGTATATCCTTCCTTCTACGTGACCCCGGA
TGGTGTACCCATGTCATACCGAAAGGTTTAGAATGGTGCCCAGGATTGAT
TGGACGAAAACACGCGCAAACACAAGCATACACACCCGTCTTTGTACGAG
TTTTTGCTCCACATGTACGCAATTCAAGGCGGAGTGTCCCACGGTGAAAA
CGGGTTGTGTGTGCATGTTGACGAGTACGGTTTGTCCCATGCGAATGTCG
AAATTATGAATGTAAGAAGCAAATGCTCGGTTCGGTTGATCACTTACATT
TCCCTGGGTCGTCTTATGTGTCATTTTCTCTCCTCTAAATCATATATCGC
GTCTGAAACTTGAACCTCTGGGACGTGCACGCAACAACGATCGGCCTTCC
ACTACTTTTATCCTACGATCGGGCCTGTACAATCTGACGAATGGACGGAC
GGACTGGTGGCGGCGCAACTAAAACACACAAAAAAACAAAAAAAAGGTTG
GAATATGGACGCTGGTCTACTCGTCTTCCCAGGCCTTCCGTTCCAGCCCG
TTCTTCGCGACGTTCCAGGCGCTTCTCGGAAAAGAGGGCGTCGCGGAGAG
GATTTTTTCCTACACCGACGCGTTCCCCAACGCCAAGATAGGCCAGGCGA
GGCAGATCGTGAACGAGGACTGCACGGAGCTCTTGTCACGGGTGGAGATG
TCTGTCTGGCCTCATAGGTGGGTGATTTGGTGTAGTGCGTGGTGCGATGA
AATAAGAAAAGTCAAGCCAAAGGCGCCGGCCCGCGCGCGAGGATGAAACG
CCGGAAATGGGTACGAAAGGTGGCGGTTTCACAGTCGAAGCGATATCGGC
ACGGCGTCAGCACTTTTTCGAGAATGACAAATATCTCTCGTGTACTCCAT
TCATCACCCGCATACACAAGAACGCGACACGATGCACCACCATCATTAAC
CCCACTCCCAAAAAACGACACCGATGCAAGATACTGACCAAGCTCAGCGA
GCGAAGCGACCGAGCGTCGATTTGTATTCCACGCCAACCGCCCGCCGTCA
TTCCGTTCATGTCGCGCTTCATTTCCTTTCTTTGCCGGGCCTGCTTGGAA
CGACGACTCAGATGGATATCGGGCGTCGTGGAGACGCGGTCGAAGATCGT
CAACGACAACGTCGGCGATCGATTGGAGGTCATCGTGGACGACACCAGGG
TTAGCGACTCCGTCCTGGGAAAGATCAGCCCCCGGCTGGAGGAGCTGAGA
GTGCCTGTCGACCAGCTCTCGGAGAGGTGAGGGAGGGAAGGAGGGAGAGA
GAAAGGCGCGCTATAAAAAAATTTGGGATATACACTTCGAAAGGAAAAAT
TGTGTGTGTGTGGATAATAATCTTGCCAGGTAGGTATGATATCATACCAC
AACCATTGCGAGCGAGCGAGCGAGCGCGCACGGCAAACTTTGACTGCGAA
CGTCTGGAGGCGGCGAGTACATATGTTGCCTTGATGGCACAAAGGCCGGT
TTGGCCGTCGCCCTCGTCCTTAGGAAGCGTTCATGGTGGCTGTCCGTGTT
TCGGATACTGTACAACAAAGCAAATCATTTGCGGAAGTCAATCAATGGCC
AACGATATATTTATTCAGAAGCAAATGGACGAACGAAAGGCTAAAAAACT
CATACATGACCAAATGAATAGTGGCGTCCATCGAAGTCTTTGCGCGACAA
GGATACGGCTCGCAAGTTTTCAAGCGTCGCCGACGACTAAGTGGTTGGCC
ACCCCAGTGGGGAAGGTGGTTTTGGTCGTCCAACGTGACCAGCTGTAGCG
GAACCCCTATATGGCGGACGGGGTAGAATTGGCCGTGAAGCAGGACCTGA
TCTGCGTGAGCTGCTGGTATCACGGCATATGCCATTGGTCGCAGTTGGGT
CGCTGACAGTCCCCAAGGTGGTATTGGTGGTCATGGGTTTGCTGCTCTTA
AACAACGCCGGATCAAAATTCTTAATTCATGCGGCGGAATCTGCATCGAG
CGTTACTGGTTGGACCTTTAATGTCGCGCTCGTCGTGTCCAGGGTGCTAA
GGACACCACGGCTGACCGGAGATAGGAGGCACCAAAGATCCCAAGCCTGG
GCGAGGCCGTCTCGTGTCACAACGGGCGCCTAGTCGTGTTGTTGGCTGTG
TCGCGCGCGCGGCCCAGAGCCCTCAGCTGCATTGCGAGACAAAGTTTGGC
AAGAGTCGACCCCGCTGAGTGGATAGCGGAGAAGCTCTTGCGCATTTGTT
GAATTCCGTCCGCAAATACGTTTAAGTAGCCAGGAGCTACCTCAGGTATT
GGATGAGAAAGAAGAATCCACAGCTCACACACACAACGGTAGGGGGGCGA
TATTTTCACGAAAATATTACGGGTGCAGCGGCGAAAACATTCTGGGTGTG
AGTTTTCACAGAGAATTATCACTGCATAGTACACCATTTCCATGAAGTAC
GGAATGTTGGCCACTCTCCTCCTCGGCGTGTTACAGTAGAAGCCCTCCTT
TTACCTTTTAATGTTGCACGAAGTAATTGTTGGTCCATTTCACGGACACG
TGTCGGCGACGAATCGTAGTAGGCGGCGTATTGTCAATCGGTCAGGGCGC
GTCGCCCAGATGAAACACAGCAGTGGCAGGTTATGAGGTGGATCCGACAG
GACCTCTCCAACACTCAGAGGATCGTTCTTTGTGCACACACGTGCACACC
AAGCACGTCGCATGCGGTTCAAGATCTCTGCAGAGGGTAAGTAAAAAAGC
ACCTGCTTGGTGTGACTCCGATTTCGCCCGCCTGTTGGGTGTGTCGGAGA
CCGTTGTTGTTTGCCAGGTCCGAAATGTCGTCGTCGGTCGCTTGCCTTCT
TGGCGAACAGAATTGCACAGCACACTATTACGAACTAGCAACAAATGCAC
GCTTGACGGTGACGGCGGCGTACATAAATTCAGTTTCGCAAAACGGTACC
ACCGCCGTTTCGCCAAATTTATTGGTGTCTCCTTCGACCAGCTAGATCGC
CGTCGTCCGCATAGCTGGCGCCGCGCTGAACCCCTCCCCCCTTCCACCGC
CAACCCGTCCCGTGCTTTTGCCCCGCAACAGATTGTTCGACCGCATCCCG
CGCATCACGCTGGAAACAGTTTTCCTTGACCAGGATCTGCGCGTGACTCG
ACTCCCCGACAGAAATTTCTTAATCTACGTGAAGGATTACTGACTCTGAA
TTAACAAAGTAACAAATTTGCTAAATCATTGGGCGAGATGTGTGTAGTAC
GTGTTTACAGGCATAGCATCAAGTGCTTGAAAGTGGGCGGTAGAGACTGT
GGGAACACGGATTATCCCGGCAGAGAGGAAGGCATCCTCCACTTTTGGGC
TAGGTGTTCGTAGGACCGGGTCGGTGCGCATGAATACTTCGGGTGTCAAT
TTATCTATTTAGGTGCAGACTACGGTGAGATCATCCATGGGTGAGGATTG
ATCGATCGAGCAATTAGATGATCGGTTGGTCTTGAAGTGCAGCATGCATT
CTTATCGCGGTGTCGATTGAGTTTGTCCGTTGTCGTCTTGTTTTTTTTGC
AAGCGAGCGAGCGCAGCGAGAAGACTTTGGAATCGGCGAGGGCTTACGTG
TATGATGGCGGGTGAATGTGTTTGCTTGTGTTGTGTACTGCAGATGGTTC
GAGTACCGATTGTAGCAGAACGGCATTTTTAGGCCCGGAGATGGTTCAGA
ATGCGCGGTTTTTGTTTATTGCACCATAGAGCGTCGTGGATTCGTCTCCT
GATTGTCTCATGTATTGATTTTTCATTCGTGAAAAATTCGGTTTTCGTGG
AAGGCACAAGAGCTGTCGTTCAGGGCGCGTTCTGCCTGGTGGAGCGATGT
ACAAAACGGGGGTACGAAATGAAGCAAAGGGAGTGCGTGTCGTCTCTTCT
TCACGCGCCATTTGGCCGAGTGCAGATTCCACACGACCCGTAACAAATTT
CACGGAGAGGAAACGAAACCACGTTTCGCTTAGGTATGTTCGAGGTTGGG
TTCAAACAGATGATTCCTTTTCGGGCGGACGGACGACCATGCCCGCCC
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Coding sequence (CDS) from alignment at P-littoralis_Contig10:433887..441034+

>mRNA_P-littoralis_Contig10.103.1 ID=mRNA_P-littoralis_Contig10.103.1|Name=mRNA_P-littoralis_Contig10.103.1|organism=Pylaiella littoralis U1_48|type=CDS|length=870bp|location=Sequence derived from alignment at P-littoralis_Contig10:433887..441034+ (Pylaiella littoralis U1_48)
ATGCGGCTACTCTCGTATATGGTCCTCCCACAGCTCGTCAGGTTGACGGC
CAACGGATTCGCCCTCGGACCGGCAGCGGGGACGGGGAGAGGCATCGAGC
TTCGGAACCAAAATCAGCACAAGCGCTTTTCCTCTACTTCACACGCCAGA
AGAAATGTCGTCGTCACAGGCACAAGTATGAGTTCGGTGAGCACACCTGC
TGATGTCGATGAGGTCACTGTCATCAAGAACTCGCTTCTCCAGGTGGCGG
CCATAACAGAACGCGGCCAGCTAGCAACGGAGGCCCAGCGAGGCGACATG
GACCTTTTAGTCGAGCGTCTGGAGGAGCTCAAGGCAGACCAGCAGCTTGA
GCCCTTCAAGGACGAGGACATGGTTGGAATATGGACGCTGGTCTACTCGT
CTTCCCAGGCCTTCCGTTCCAGCCCGTTCTTCGCGACGTTCCAGGCGCTT
CTCGGAAAAGAGGGCGTCGCGGAGAGGATTTTTTCCTACACCGACGCGTT
CCCCAACGCCAAGATAGGCCAGGCGAGGCAGATCGTGAACGAGGACTGCA
CGGAGCTCTTGTCACGGGTGGAGATGTCTGTCTGGCCTCATAGATGGATA
TCGGGCGTCGTGGAGACGCGGTCGAAGATCGTCAACGACAACGTCGGCGA
TCGATTGGAGGTCATCGTGGACGACACCAGGGTTAGCGACTCCGTCCTGG
GAAAGATCAGCCCCCGGCTGGAGGAGCTGAGAGTGCCTGTCGACCAGCTC
TCGGAGAGATTGTTCGACCGCATCCCGCGCATCACGCTGGAAACAGTTTT
CCTTGACCAGGATCTGCGCGTGACTCGACTCCCCGACAGAAATTTCTTAA
TCTACGTGAAGGATTACTGA
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