mRNA_P-littoralis_Contig806.8.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig806.8.1 vs. uniprot
Match: A0A6H5KPB3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPB3_9PHAE) HSP 1 Score: 214 bits (545), Expect = 1.050e-63 Identity = 130/170 (76.47%), Postives = 146/170 (85.88%), Query Frame = 1
Query: 1 QLADSVNGLEDRLAVMERRPVDYAFGQGELGRRRAALESLRQDVDVARGSMPLGDMSMGGXXXXXXXXXXXXTSRLEQQRQTMRDHDRMLEDLGRGVGRLKTQSVMINEETSLHVRLLDGMEGDAERASSGLETEARHAQKIREKSKTFNLYVIIVVLSVILAVLVFSGL 510
+L +SV L +RLA+MERRPVD+A G GEL RRRA LE+LR++V RG P+G XXXXXXXXXXXX SRLEQQR+TM++HDRML DLGRGVGRLKTQS MINEETSLHVRLLD MEGDAERASSGL TEARHA+KIREKSKTFNLYVII+VLS+ILA+LVFSGL
Sbjct: 33 KLGESVEALAERLALMERRPVDFAVGHGELARRRAELETLRREVGAVRG--PMGGGQXXXXXXXXXXXXXXXMSRLEQQRETMKEHDRMLADLGRGVGRLKTQSAMINEETSLHVRLLDDMEGDAERASSGLRTEARHAEKIREKSKTFNLYVIILVLSIILAILVFSGL 200
BLAST of mRNA_P-littoralis_Contig806.8.1 vs. uniprot
Match: D8LCV7_ECTSI (Soluble NSF Attachment Protein (SNAP) Receptor (SNARE) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCV7_ECTSI) HSP 1 Score: 202 bits (513), Expect = 1.310e-59 Identity = 125/155 (80.65%), Postives = 137/155 (88.39%), Query Frame = 1
Query: 46 MERRPVDYAFGQGELGRRRAALESLRQDVDVARGSMPLGDMSMGGXXXXXXXXXXXXTSRLEQQRQTMRDHDRMLEDLGRGVGRLKTQSVMINEETSLHVRLLDGMEGDAERASSGLETEARHAQKIREKSKTFNLYVIIVVLSVILAVLVFSGL 510
MERRPVD+A GQGEL RRRAAL++L ++V RGSM G XXXXXXXXXXXX SRLEQQR+TM++HDRML DLGRGVGRLKTQSVMINEETSLHVRLLD MEGDAERASSGL TEARHA+KIREKSKTFNLYVII+VLS+ILA+LVFSGL
Sbjct: 1 MERRPVDFAVGQGELARRRAALDTLHREVGAVRGSM--GGXXXXXXXXXXXXXXXXXMSRLEQQRETMKEHDRMLADLGRGVGRLKTQSVMINEETSLHVRLLDDMEGDAERASSGLLTEARHAEKIREKSKTFNLYVIILVLSIILAILVFSGL 153
BLAST of mRNA_P-littoralis_Contig806.8.1 vs. uniprot
Match: A0A835ZEW5_9STRA (Soluble NSF attachment protein receptor n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZEW5_9STRA) HSP 1 Score: 115 bits (288), Expect = 3.910e-26 Identity = 73/197 (37.06%), Postives = 108/197 (54.82%), Query Frame = 1
Query: 13 SVNGLEDRLAVMERRPVDYAFGQGELGRRRAALESLRQDVDVARGSMPLGDMSMGGXXXXXXXXXXXXTSRLEQQRQTMRDHDRMLEDLGRGVGRLKTQSVMINEETSLHVRLLDGMEGDAERASSGLETEARHAQK-------------------------------IREKSKTFNLYVIIVVLSVILAVLVFSGL 510
+++ L ++L E RP+D+ + ++ RRR+ LE L Q + G GG + RL +QR+ M++HDR++E+LG+GVGRL SV+IN+E +LHVRLLD M+ D ERA++ L E RHAQK +R+KSKTF LYV I+VL+++L +L+ SGL
Sbjct: 26 ALDSLSNQLRAAETRPMDHGLTRVKVLRRRSQLEGLEQQLQSVGG---------GGGAGMRGSGSGGISGRLAKQREAMQEHDRIVEELGKGVGRLHQTSVVINDEANLHVRLLDDMDEDIERANASLMQETRHAQKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVRQKSKTFWLYVTIIVLTIVLVLLIVSGL 213
BLAST of mRNA_P-littoralis_Contig806.8.1 vs. uniprot
Match: A0A4D9D1R7_9STRA (t-SNARE coiled-coil homology domain-containing protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D1R7_9STRA) HSP 1 Score: 103 bits (258), Expect = 6.600e-22 Identity = 61/174 (35.06%), Postives = 97/174 (55.75%), Query Frame = 1
Query: 4 LADSVNGLEDRLAVMERRPVDYAFGQGELGRRRAALESLRQDVDVARGS------MPLGDMSMGGXXXXXXXXXXXXTSRLEQQRQTMRDHDRMLEDLGRGVGRLKTQSVMINEETSLHVRLLDGMEGDAERASSGLETEARHAQKIREKSKTFNLYVIIVVLSVILAVLVFSG 507
L +V+ L+ RL ME+ P + Q ++ RRR ++ LR + + S + G G + +Q+R+ + + D +LEDLG+GV RLK Q ++I +ET +H +LL+ ++GD E A+S L EARHAQ+IRE+S LY+ I +L +IL +L+ G
Sbjct: 44 LEQTVDKLDYRLGTMEQNPGQFGISQSDVVRRRELVKGLRHQLSLLGTSSHGTNGLATGTTRDGSAASGGGGVPGGLRTLAQQRREIIHEQDELLEDLGKGVDRLKMQGLVIRDETGIHHKLLEDIDGDVEAAASSLRMEARHAQRIREQSTVCRLYICIAILLIILVLLLVIG 217
BLAST of mRNA_P-littoralis_Contig806.8.1 vs. uniprot
Match: A0A7S1XYZ3_9STRA (Hypothetical protein n=3 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XYZ3_9STRA) HSP 1 Score: 89.4 bits (220), Expect = 1.990e-16 Identity = 56/163 (34.36%), Postives = 87/163 (53.37%), Query Frame = 1
Query: 19 NGLEDRLAVMERRPVDYAFGQGELGRRRAALESLRQDVDVARGSMPLGDMSMGGXXXXXXXXXXXXTSRLEQQRQTMRDHDRMLEDLGRGVGRLKTQSVMINEETSLHVRLLDGMEGDAERASSGLETEARHAQKIREKSKTFNLYVIIVVLSVILAVLVFSG 507
N L+ L M ++P D+ E+ RR++ + S ++ + R MG ++Q+ M D M+ D+G+GV RL + I +ET LHVRLLD M+ D +RA++GL EARHA++IR KS+ LY+ I +LS +L +L+ G
Sbjct: 102 NALDRELTEMAQKPADFFMSSSEVARRKSLIASYKEQLHNLR---------MGRDPGAAGADQGQQMK--QRQKDIMALQDDMIADIGKGVDRLGNTANKIKDETQLHVRLLDEMDVDVDRATAGLRAEARHAEQIRLKSQNCYLYICIAILSCVLLLLIVLG 253
BLAST of mRNA_P-littoralis_Contig806.8.1 vs. uniprot
Match: A0A6G0WAN7_9STRA (t-SNARE coiled-coil homology domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WAN7_9STRA) HSP 1 Score: 75.5 bits (184), Expect = 5.390e-12 Identity = 42/87 (48.28%), Postives = 56/87 (64.37%), Query Frame = 1
Query: 226 LEQQRQTMRDHDRMLEDLGRGVGRLKTQSVMINEETSLHVRLLDGMEGDAERASSGLETEARHAQKIREKSKTFNLYVIIVVLSVIL 486
L Q Q M+D D L +G+GV LK S+ + ET LH RLLD + D +RA+SGLE+E A+ + +KS F LY+ I+VLSVIL
Sbjct: 115 LRVQNQIMQDQDEQLNIIGQGVSNLKQYSLAVKNETDLHARLLDDINIDVDRATSGLESEGDRAEYVAKKSSNFRLYMAILVLSVIL 201
BLAST of mRNA_P-littoralis_Contig806.8.1 vs. uniprot
Match: A0A485KLB7_9STRA (Aste57867_8788 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KLB7_9STRA) HSP 1 Score: 73.9 bits (180), Expect = 1.830e-11 Identity = 42/87 (48.28%), Postives = 56/87 (64.37%), Query Frame = 1
Query: 226 LEQQRQTMRDHDRMLEDLGRGVGRLKTQSVMINEETSLHVRLLDGMEGDAERASSGLETEARHAQKIREKSKTFNLYVIIVVLSVIL 486
L Q Q M D D L +G+GV LK S+ + +ET LHVRLLD + D E+A++GLE+E A + ++S F LY+ IVVLSVIL
Sbjct: 115 LRVQNQMMLDQDEQLNMIGQGVANLKQYSLAVKDETDLHVRLLDDINVDVEKATTGLESEGDRAAILAKRSSNFRLYLAIVVLSVIL 201
BLAST of mRNA_P-littoralis_Contig806.8.1 vs. uniprot
Match: A0A024G688_9STRA (t-SNARE coiled-coil homology domain-containing protein n=3 Tax=Albugo candida TaxID=65357 RepID=A0A024G688_9STRA) HSP 1 Score: 72.0 bits (175), Expect = 7.510e-11 Identity = 39/79 (49.37%), Postives = 49/79 (62.03%), Query Frame = 1
Query: 235 QRQTMRDHDRMLEDLGRGVGRLKTQSVMINEETSLHVRLLDGMEGDAERASSGLETEARHAQKIREKSKTFNLYVIIVV 471
Q+Q MRD D L+ +G+GV LK S+ + +ET LH+RLLD M+GD A GL TE A KI +S LYV IVV
Sbjct: 113 QKQIMRDQDDQLDIIGKGVANLKNFSMAVKDETDLHIRLLDDMDGDVLHAKDGLNTEGARAAKIARQSGNIKLYVTIVV 191
BLAST of mRNA_P-littoralis_Contig806.8.1 vs. uniprot
Match: W4FTN5_9STRA (t-SNARE coiled-coil homology domain-containing protein n=6 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FTN5_9STRA) HSP 1 Score: 72.4 bits (176), Expect = 9.340e-11 Identity = 42/87 (48.28%), Postives = 54/87 (62.07%), Query Frame = 1
Query: 226 LEQQRQTMRDHDRMLEDLGRGVGRLKTQSVMINEETSLHVRLLDGMEGDAERASSGLETEARHAQKIREKSKTFNLYVIIVVLSVIL 486
L Q Q M D D L +G+GV LK S+ + ET LHVRLLD + D +RA++GLE E AQ + +KS F LY+ IVVL+ IL
Sbjct: 139 LRVQNQIMLDQDDQLSLIGQGVSNLKQYSLSVKNETDLHVRLLDDINVDVDRATTGLEAEGDRAQILAKKSSNFRLYLAIVVLTAIL 225
BLAST of mRNA_P-littoralis_Contig806.8.1 vs. uniprot
Match: A0A024TYR3_9STRA (t-SNARE coiled-coil homology domain-containing protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TYR3_9STRA) HSP 1 Score: 70.5 bits (171), Expect = 2.940e-10 Identity = 41/87 (47.13%), Postives = 54/87 (62.07%), Query Frame = 1
Query: 226 LEQQRQTMRDHDRMLEDLGRGVGRLKTQSVMINEETSLHVRLLDGMEGDAERASSGLETEARHAQKIREKSKTFNLYVIIVVLSVIL 486
L Q Q M D D L +G+GV LK S+ + E LHVRLLD + + +RA++GLE+E AQ + +KS F LY+ IVVLS IL
Sbjct: 117 LRVQNQIMLDQDDQLHLIGQGVSNLKQYSLAVKNEADLHVRLLDDINIEVDRATTGLESEGDRAQVLAKKSSNFRLYLAIVVLSAIL 203 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig806.8.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 14
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig806.8.1 >prot_P-littoralis_Contig806.8.1 ID=prot_P-littoralis_Contig806.8.1|Name=mRNA_P-littoralis_Contig806.8.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=156bp MERRPVDYAFGQGELGRRRAALESLRQDVDVARGSMPLGDMSMGGGAAGGback to top mRNA from alignment at P-littoralis_Contig806:36439..40856+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig806.8.1 ID=mRNA_P-littoralis_Contig806.8.1|Name=mRNA_P-littoralis_Contig806.8.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=4418bp|location=Sequence derived from alignment at P-littoralis_Contig806:36439..40856+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig806:36439..40856+ >mRNA_P-littoralis_Contig806.8.1 ID=mRNA_P-littoralis_Contig806.8.1|Name=mRNA_P-littoralis_Contig806.8.1|organism=Pylaiella littoralis U1_48|type=CDS|length=468bp|location=Sequence derived from alignment at P-littoralis_Contig806:36439..40856+ (Pylaiella littoralis U1_48)back to top |