mRNA_P-littoralis_Contig805.20.2 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig805.20.2
Unique NamemRNA_P-littoralis_Contig805.20.2
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig805.20.2 vs. uniprot
Match: D7FSB4_ECTSI (Palmitoyltransferase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FSB4_ECTSI)

HSP 1 Score: 882 bits (2280), Expect = 1.100e-311
Identity = 537/723 (74.27%), Postives = 591/723 (81.74%), Query Frame = 1
Query:   58 NFFGGKRGGNHSHSHGPGQQCSHDHGSAXXXXGGMLSYPAGGALGQGQQSSSSSSTRVAQPGMEMMPTSQQQPSGLDGLPLGGGGDXXXXXGTIGMENIGQHLQGAPADVLAAAERLSLISPMMLGAGXXXXXXVMDMDGMGGVVRTAPGAESTDTGLLSEATIASQLLVAVRSRDTSTLRRLCSSTSEHLSAALKRRDGQGHTLMHWAAKSGELEMLELLANSGCPTNEFSTDAVXXXXXXXXXXXXXLRASAWLLGPGGADPESRDNQGCTALVIAAQYGFVELVIYLSHHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNRDAAEYLVIEARANVNARDKKNETPLDLARKKNQARNDRISAHSIDARMAIENGAGQSWLSPAVFLKLARTPRVWKAACETGEGVQGAGWPLPLNVVLTSFVMWMTLQRFFGEEYLSLGHNILLLVSTVAQLFMWLALFLTWASNPGFVDPTDPKVSLAFHRRVGVLTGEKGKGTTGIEEDLGHGSYSDLDIEDPSSSLMGLESGAGSVASSACYTCSIERPLRSRHCRNXXRCVRAFDHHCAFVGNCVGAGNYRWFFSYIVCLVLSTASYTAMCVDWLWHLGLSVAVVVSAAYAVFFGCFGILLFVYHAQLIRQNLTTSEHHALGRVDYLAAPNQSGQYYNPFDQGCVDNCLARVSGTHDTPPPGLLARLRAT 2226
            +FFG +R GN       GQQCSH + S+        S+PAGGALGQ Q S+++      QPGME+MPT QQQP GL GLP+GGG       G +G+ NI + L+GAP DVLAAAERLSLI+PMM GA XXXXXXVMDMDGM  VVRTAPGAESTDTG LSEATIASQLLVAVR+RD +TLRRLCSSTSEHL AALKRRDGQGHTLMHWAAKSG++ MLELLAN+GCP NEFS D V             LRASAWLLGPGGADPE RDNQGCTALVIAAQYGFVELVIYLS+HXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNRDAAEYLV EA+ANVNARDKKNETPLDLA KK Q      S+  +  R +   GAGQSWLSPAVFLKLARTP +W+AACETGEG+QGAGWPLPLN+VL  F MW+T QRFFGEE+LSLGH++LLLVSTV+QL +WL+ FLTW SNPGFVDPTDPKVS AFHRRV VLTG+K         D         D+EDP+SSLM LESGAGSV+SSACYTC+IERPLRSRHCRN  RCVRAFDHHC FVGNCVGAGNYRWFF Y++ LV ST SYT MCVDW+WH+GLS AVVVS +Y+  F  FGILLF+YHAQLIRQNLTTSEHH +GRVDYL APN SGQY+NPFDQGC+ NC+AR SGTHDTPPPGL+ARLRA+
Sbjct:    3 SFFGSRRAGNQQCR--SGQQCSHGNCSSANA---SASFPAGGALGQPQGSNAT----TVQPGMELMPTLQQQPGGLAGLPVGGGAGAG---GLMGVGNIEESLKGAPPDVLAAAERLSLIAPMMAGAXXXXXXXVMDMDGMANVVRTAPGAESTDTGALSEATIASQLLVAVRTRDVATLRRLCSSTSEHLPAALKRRDGQGHTLMHWAAKSGDVAMLELLANAGCPPNEFSKDPVGMSPLHWAATEGRLRASAWLLGPGGADPEGRDNQGCTALVIAAQYGFVELVIYLSNHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNRDAAEYLVFEAKANVNARDKKNETPLDLALKKKQ------SSMELFLRTS---GAGQSWLSPAVFLKLARTPTLWRAACETGEGLQGAGWPLPLNLVLMGFAMWVTTQRFFGEEFLSLGHDMLLLVSTVSQLLLWLSFFLTWVSNPGFVDPTDPKVSFAFHRRVRVLTGKKA--------DHXXXXXXXXDVEDPTSSLMRLESGAGSVSSSACYTCAIERPLRSRHCRNCRRCVRAFDHHCPFVGNCVGAGNYRWFFLYVIFLVASTVSYTIMCVDWMWHIGLSWAVVVSGSYSFLFAGFGILLFMYHAQLIRQNLTTSEHHMMGRVDYLLAPNYSGQYHNPFDQGCMANCVARFSGTHDTPPPGLVARLRAS 696          
BLAST of mRNA_P-littoralis_Contig805.20.2 vs. uniprot
Match: A0A836CCL2_9STRA (Spc98 family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CCL2_9STRA)

HSP 1 Score: 246 bits (628), Expect = 7.090e-64
Identity = 225/655 (34.35%), Postives = 293/655 (44.73%), Query Frame = 1
Query:  487 VVRTAPGAESTDTGLLSEATIASQLLVAVRSRDTSTLRRLCSSTSEHLSA-ALKRRDGQGHTLMHWAAKSGELEMLELLANSGCPTNEFSTDAVXXXXXXXXXXXXXLRASAWLLGPGGADPESRDNQGCTAL------------------VIAAQYGFVELVIYL----------------------------------------------SHHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNRDAAEYLVIEAR-------ANVNARDKKNETPLDLARKKNQARNDRISAHSIDARMAIENGAGQSWLSPAVFLKLARTPRVWKAACETGE-------GVQGAGWPLPLNVVLTSFVMWMTLQRFFGEEYLSLGHNILLLVST-VAQLFMWLALFLTWASNPGFVDPT-DPKVSLAFHRRVGVLTGEKGKGTTGIEEDLGHGSYSDLDIEDPSSSLMGLESGAGSVASSACYTCSIERPLRSRHCRNXXRCVRAFDHHCAFVGNCVGAGNYRWFFSYIVCLVLSTASYTAMCVDWLWHLGLSVAVVVSAAYAVFFGCFGILLFVYHAQLIRQNLTTSEHHALGRVDYLAAPNQSGQYYNPFDQG-CVDNCLARVSGTHDTPPPGL 2205
            V+ T PG ESTD G      +  QL +AVR        ++        +   LK  D  GH+LMHWAAKSG+++++ELL  +G P    S D V             L+A  WL   G AD + RD QGCT L                  VIAAQYGFVELVIYL                                               H               XXXXXXXXXXXXXXXXXXXXXX                   + DA EYLV+EA        A+  A+DK  +TPLDLA KK          H +D    +   +      PA+ L+  R P + K  C  G+       G QGA WP  LNV  +SFV    + RFF   +L       ++ +   A + MW+ L     S+PGF+    +P +S  F +R+  L          +EE+ G G   +           GL +G        CYTCS+ERP+R++HCR   RCVR FDHHCAFV NC+G  NY +F+ Y+V  + +T ++      WLW LG    V VS  Y + +   GI L  YH QLI +NLTT+EH    R  YL   + +G++ NPF +G  V N L+R+        PGL
Sbjct: 1105 VITTVPGLESTDVGESDPEALMRQLYLAVRMGHAQAAGQVIEKLKNRNALDMLKEPDHDGHSLMHWAAKSGDVQLMELLLLAGSPLAVPSQDPVGMYPMHWTCTEGHLKALKWLRSRG-ADVDCRDRQGCTPLXXXXXXXXXXXXXXXXXVVIAAQYGFVELVIYLIKAGARADILDENADSPLHWAXXXXXXXXXXXXXXXXXXVMMLVNLGHDAYKGHTPVMVMLLKXXXXXXXXXXXXXXXXXXXXXXVDARDAHGQSPLHLAALRGHLDAVEYLVLEANYLVLDANADTQAKDKYEKTPLDLAVKK----------HMVDVEWFLRTQSAGGAAKPAMLLECLRRPALIKTMCAMGQXXXXXXQGAQGALWPYILNVGSSSFVGGAMVTRFFDARFLYTPFAASIVTAAFTAYVMMWVFLGAVRFSDPGFISAQQEPALSANFKKRMETL----------LEEEAGEGQGPE-----------GLPTGP------LCYTCSLERPIRAKHCRVCRRCVRCFDHHCAFVRNCIGLRNYSYFYLYLVFFLAATVTHVTAGALWLWRLGFDWLVAVSTVYTILYVVMGIGLVQYHTQLISRNLTTNEHQNWHRYAYLR--DHAGRFSNPFSRGGFVANFLSRIVYMDSDKRPGL 1719          
BLAST of mRNA_P-littoralis_Contig805.20.2 vs. uniprot
Match: W7UCL7_9STRA (Palmitoyltransferase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7UCL7_9STRA)

HSP 1 Score: 179 bits (455), Expect = 4.390e-43
Identity = 218/527 (41.37%), Postives = 273/527 (51.80%), Query Frame = 1
Query:  598 RRLCSSTSEHLSAALKRRDGQGHTLMHWAAKSGELEMLELLANSGCPTNEFSTDAVXXXXXXXXXXXXXLRASAWLLGPGGADPESRDNQGCTALVIAAQYGFVELVIYLSHHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNRDAAEYLVIEARANVNARDKKNETPLDLARKKNQARNDRISAHSIDARMAIENGAGQSWLSPAVFLKLARTPRVWKAACETGEGVQGAGWPLPLNVVLTSFVMWMTLQRFFGEE-YLSLGHNILLLVSTVA-QLFMWLALFLTWASNPGFVDPTDPKVSLAFHRRVGVLTGEKGKGTTGIEEDLGHGSYSDLDIEDPSSSLMGLESGAGSVASSACYTCSIERPLRSRHCRNXXRCVRAFDHHCAFVGNCVGAGNYRWFFSYIVCLVLSTASYTAMCVDWLWHLGLSVAVVVSAAYAVFFGCFGILLFVYHAQLIRQNLTTSEHHALGRVDYLAAPNQSGQYYNPFDQGCVDNCLARV 2172
            RR   S S  L A L  RDG GHT+ HWAAK G+LE++ LLA+ G P  E STD+V     XXXXXXXX           GAD ++RD Q CT L+IAAQY            XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX     EYLV++A A  + +D+   TP DLA KK Q +        + A +A       +W      L L      WK   + G   + + WP  L V    +V+ +   RFF E   L+L  +  L    VA QL MW    L W  +PG+V+      S  +   +   + E      G+   L   +          + L    +       + C+               XX  V+ FDHHC F+GNCVGAGNYRWFF Y+  L+L+   Y A CV +L   G  + V ++  Y +  G     L  YH+QL+  N TT+EH    R DY   P  +G+  NPFD+G   N LAR+
Sbjct:  266 RRRALSPSSRLRAYLWERDGDGHTVTHWAAKRGDLELVSLLADKGAPLFEASTDSVGMQPIXXXXXXXXXXXXXXXX-RNGADLDARDKQLCTPLLIAAQYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEYLVLDADARTDRKDRNGSTPADLALKKGQRK--------VAAFLASHGLEKFNWRQ---LLSLQH----WKVWLQGGGNAEASAWPFYLVVASNVWVLGLYPLRFFSERGLLALSSHTRLNTCCVALQLSMWAFFLLAWRVDPGYVEGKREGRSQEYEEALETFSSE------GMARVLEKAAARSQHHHRQQNGLAPSTAAIKPPLPNLCHAXXXXXXXXXXXXXXXXXXVQVFDHHCPFIGNCVGAGNYRWFFLYVCDLLLAALLYIATCVIYLKRAGFDMLVFLTLLYVLSLGLMVGALAGYHSQLVALNFTTNEHQNYWRYDYFRDP-VTGRNRNPFDKGVWQNFLARI 769          
BLAST of mRNA_P-littoralis_Contig805.20.2 vs. uniprot
Match: A0A7S1UAK2_9STRA (Palmitoyltransferase (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UAK2_9STRA)

HSP 1 Score: 142 bits (357), Expect = 1.270e-31
Identity = 199/534 (37.27%), Postives = 272/534 (50.94%), Query Frame = 1
Query:  631 SAALKRRDGQGHTLMHWAAKSGELEMLELLANSGCPTNEFSTDAVXXXXXXXXXXXXXLRASAWLLGPGGADPESRDNQGCTALVIAAQYGFVELVIYLSHHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNRDAAEYLVIEARANVNARDKKNETPLDLARKKNQARNDRISAHSIDARMAIENGAGQSWLSPAVFLKLARTPRVWKAACETGEGVQGAGWPLPLNVVLTSFVMWMTLQRFFGEEYLSLGHNILLLVSTVAQLFM---WLALFLTWASNPGFVDPTDPKVSLAFHRRVGVLTGEKGKGTTGIEEDLGHGSYSDLDIEDPSSSLMGLESGAGSVASSACYTCSIERPLRSRHCRNXXRCVRAFDHHCAFVGNCVGAGNYRWFFSYIVCLVLSTASYTAMCVDWLWHLGLSVAVVVSAAYAVFFGCFGILLFVYHAQLIRQNLTTSEHHALGRVDYLAAPNQSGQYYNPFDQGCVDNCLARVSGT------HDTPPPGL 2205
            SA L RRD QGHTL HWAA++G++E+L+LL++ G P  + S D+V    XXXX      RA+  LL  G AD +S DN  C                     XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX     EYLV++   +V   D +  T   LA +K +     ++         +     +  LS    ++L    +       + E  +   + L  N + +  V    L   +G+E +   H    + + +  LFM   W+   LTW S+PG V   +  +   +                  EE L        D+E        L +G   V  + C+TC I RPLRS+HCR   +CVR FDH+C FV N VG GNYR+FF Y+V   ++  ++  +C+  LW  G    V ++  Y + F    + + VYHAQL+  NLTT+EH    R  YL   + +G ++NP+D+G + N + R          ++ PPP  
Sbjct:   63 SALLSRRDSQGHTLAHWAAQAGKVELLQLLSSIGAPMFDKSDDSVGMTPXXXXCWRGHPRAARALLDMG-ADIDSLDNAMCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEYLVLDRDVDVTVEDNEGATAQQLAVRKGKGN---VAGFLRRHSQGLWKRPLREILSLNFVMELLGFNQ-----SRSREDSKAPFYVLIFNTIWSHVVF---LSCIYGDEQMYDQH----MTAVICLLFMMVQWVFFILTWRSDPGTVRDVNGDLERRY------------------EEALN-------DVE-------ALANGDSKV--NLCHTCHIVRPLRSKHCRVSRKCVRDFDHYCPFVQNTVGQGNYRYFFLYLVTFQIAIDAFLWLCMVKLWRDGWGWVVGLTLIYFLPFWLMNLGMCVYHAQLVYGNLTTNEHSNRWRYGYLQ--DAAGGFHNPYDKGFLANVVDRCCPDRQDQFDYEQPPPNF 544          
BLAST of mRNA_P-littoralis_Contig805.20.2 vs. uniprot
Match: F0YHB7_AURAN (DHHC domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YHB7_AURAN)

HSP 1 Score: 128 bits (321), Expect = 1.910e-26
Identity = 207/563 (36.77%), Postives = 270/563 (47.96%), Query Frame = 1
Query:  634 AALKRRDGQGHTLMHWAAKSGELEMLELLANSGCPTNEFSTDAVXXXXXXXXXXXXXLRASAWLLGPGGADPESRDNQGCTALVIAAQYGFVELVIYLSHHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNRDAAEYLVIEARANVNAR----DKKNETPLDLARKKNQARNDRISAHSIDARMAIENGAGQSWLSPAVFLKLARTPRVWKAACETGEGVQGAGWPLPLNVVLTSFVMWMTLQRFFGEEYLSLGHNILLLVSTVA---------------------QLFMWLALFLTWASNPGFVDPTDPKVSLAFHRRVGVLTGEKGKGTTGIEEDLGHGSYSDLDIEDPSSSLMGLESGAGSVASSACYTCSIERPLRSRHCRNXXRCVRAFDHHCAFVGNCVGAGNYRWFFSYIVCLVLSTASYTAMCVDWLWHLGLSVAVVVSAAYAVFFGCFGILLFVYHAQLIRQNLTTSEHHALGRVDYLAAPNQSGQYYNPFDQGCVDNCLARVSGTHDTPPPGLLARLR---ATESPP 2238
            AA   RD  GHTL HWAAK G+  +LE  A              XXXXXXXXXXXXX               ++RD QGCTAL++AAQ+G  +        XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX     EYL+++A      R    D+  +TP DLAR K   R+  +     D R A E G          F K    P    A    G   +   WP    V        + ++ F G  Y S    + +  +  A                     QL  W A  L W  +PG +D    + +L   RR                    + +Y +  ++       G E+G     +S C++C + RP RS+HCR    CV AFDH+C +VGN VG  NYR+F++Y      +   +  + V +L   G    ++ + A+   F CFG+ +  YH +L+ +NLTT+EH   GR D+    +  G+  NPFD G   N   R+        P +L   R   AT++PP
Sbjct:   84 AACASRDDGGHTLAHWAAKRGDAVILEW-ALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDARDRQGCTALIVAAQWGQADAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVCEYLLVDAECEAPPRLAPEDRNGKTPADLARDK---RHGHVLRFLEDRRPAFEQGL-------VAFAKSKLAPGACLAFFLGGSAPETMRWPWFAMVFNKVLAQALYVKLFLGA-YASAPPPLDVAAAGGAGXXXXXXXXAPPWAHAVAFNTQLLAWAAFVLCWRGDPGTIDGATCRGAL---RRA-------------------YDAYFERLVD-------GTETGE---TASLCHSCHVVRPKRSKHCRAARTCVMAFDHYCPYVGNTVGLSNYRYFYAYCAFFTAAALQWELLAVAYLRARGRHYGLIAAMAWFALFICFGLAMVAYHTRLLSKNLTTNEHVNFGRYDHFR--DAEGRPTNPFDMGVCANVADRLLPPPVDAHPLVLEIARDADATKAPP 600          
BLAST of mRNA_P-littoralis_Contig805.20.2 vs. uniprot
Match: A0A1E7FJW9_9STRA (Palmitoyltransferase n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FJW9_9STRA)

HSP 1 Score: 90.5 bits (223), Expect = 3.790e-16
Identity = 59/159 (37.11%), Postives = 84/159 (52.83%), Query Frame = 1
Query: 1744 CYTCSIERPLRSRHCRNXXRCVRAFDHHCAFVGNCVGAGNYRWFFSYIVCLVLSTASYTAMCVD-------------WL-WHLGLSVAVVVSAAYAVFFGCFGILLFVYHAQLIRQNLTTSEHHALGRVDYLAAP-NQSGQYYNPFDQGCVDNCLARVS 2175
            C+TC I RP RS+HCR   +CV  FDH C F+ N VG  NYR+F+ +++ LVL+  S+    V              WL   LG+ + ++  A         G+LL  YH QL   NL+T+EH  + R  YL    N   QY NP+D+G  +N + R++
Sbjct:  100 CHTCHIARPHRSKHCRVSRKCVLLFDHFCPFIDNTVGLHNYRYFYMFLLTLVLADISFAVTLVTYTSRYKSAHGSIPWLVLCLGIEMCIIGLAVA-------GLLL--YHTQLSCINLSTNEHMNIRRYKYLYPMINNKRQYRNPWDKGYFNNFIDRMN 249          
BLAST of mRNA_P-littoralis_Contig805.20.2 vs. uniprot
Match: A0A6G1S8S8_9ACAR (Palmitoyltransferase n=1 Tax=Aceria tosichella TaxID=561515 RepID=A0A6G1S8S8_9ACAR)

HSP 1 Score: 88.2 bits (217), Expect = 1.670e-15
Identity = 50/153 (32.68%), Postives = 79/153 (51.63%), Query Frame = 1
Query: 1744 CYTCSIERPLRSRHCRNXXRCVRAFDHHCAFVGNCVGAGNYRWFFSYIVCLVLSTASYTAMCVDWLWH-----LGLSVAVVVSAAYAVFFGCFGIL-LFVYHAQLIRQNLTTSEHHALGRVDYLAAPNQSGQYYNPFDQGCVDNCLARVSGTH 2184
            C TC   RP R  HC     C+  FDHHC ++ NC+G GNYR FF ++V L +   +  A C+ ++ +        +  V ++    +FF C+ I+ L ++H  LI +N TT+E         +    ++G+  NPF++GC  NC   + G H
Sbjct:   99 CVTCQFYRPPRCSHCSVCGDCIETFDHHCPWINNCIGQGNYRHFFFFLVSLSIHMITIFAWCILYILNHKEKLKETNSIVALTLIVLIFFLCWPIIGLTIFHILLISRNRTTNEQ--------MTGKYKAGE--NPFNEGCFTNCAYTLCGPH 241          
BLAST of mRNA_P-littoralis_Contig805.20.2 vs. uniprot
Match: A0A1R2B464_9CILI (Palmitoyltransferase n=1 Tax=Stentor coeruleus TaxID=5963 RepID=A0A1R2B464_9CILI)

HSP 1 Score: 88.2 bits (217), Expect = 6.900e-15
Identity = 45/146 (30.82%), Postives = 78/146 (53.42%), Query Frame = 1
Query: 1744 CYTCSIERPLRSRHCRNXXRCVRAFDHHCAFVGNCVGAGNYRWFFSYIVCLVLSTASYTAMCVDWLWHLGLSVAVVVSAAYAVFFGCFGILLFVYHAQLIRQNLTTSEHHALGRVDYLAAPNQSGQYYNPFDQGCVDNCLARVSGT 2181
            C +C +E+P+R++HC+   +CV  +DHHC+++GNC+G  NY +++ Y++   L  +      +D +      VA ++     V  G F I L + H  LI + +TT E  +  R+ YL +  +S     PFD G   N L  ++ +
Sbjct:  208 CMSCCLEQPVRAKHCKICKKCVHRYDHHCSWLGNCIGERNYFYYYVYLISQSLELSLAVYFLIDSIRITSFMVAPIIGTIVLVPLGIFSIFLLILHTYLISKGMTTWELISWKRISYLGSRRKS-----PFDFGLAKNWLIYLTSS 348          
BLAST of mRNA_P-littoralis_Contig805.20.2 vs. uniprot
Match: A0A813KWW0_POLGL (Palmitoyltransferase n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813KWW0_POLGL)

HSP 1 Score: 87.0 bits (214), Expect = 1.000e-14
Identity = 61/164 (37.20%), Postives = 75/164 (45.73%), Query Frame = 1
Query: 1744 CYTCSIERPLRSRHCRNXXRCVRAFDHHCAFVGNCVGAGNYRWFFSYIVCLVLSTASYTAMCVDWLWHL-----------GLSVAV---------------VVSAAYAVFFGCFGILLFVYHAQLIRQNLTTSEHHALGRVDYLAAPNQSGQYYNPFDQGCVDN 2157
            C TC + RPLRS+HC    RCV  FDHHC ++GNCVG GNYR F   I+   L       +    LW +           GL  A                V+  AYA       ++L +YHA ++  NLTT+EH    R  YLA         NPFD  CVDN
Sbjct:  132 CSTCRVYRPLRSKHCSYCDRCVFRFDHHCTWLGNCVGLGNYRSFLVLILAAALFFGHSAVIAFKVLWRVMYEVPGGLETSGLETAAWSQVLWKLFLSNGFQVLYTAYATAMFVAFVVLILYHAVIMACNLTTNEH---VRDYYLAR--------NPFDVDCVDN 284          
BLAST of mRNA_P-littoralis_Contig805.20.2 vs. uniprot
Match: X6LTY6_RETFI (Palmitoyltransferase n=1 Tax=Reticulomyxa filosa TaxID=46433 RepID=X6LTY6_RETFI)

HSP 1 Score: 84.3 bits (207), Expect = 1.150e-14
Identity = 60/177 (33.90%), Postives = 81/177 (45.76%), Query Frame = 1
Query: 1750 TCSIERPLRSRHCRNXXRCVRAFDHHCAFVGNCVGAGNYRWFFSYIVCLVLSTASYTAMCVDWLWHLGLSVA---------------------VVVSAAYAVFFGCFGILLFVYHAQLIRQNLTTSEHHALGRVDYLAAPNQSGQYYNPFDQGCVDNCLARVSGTHDTPPPGLLARL 2217
            TC I RP R++HCR    CVR FDHHC +VG CVG  NYR+F  +++ + L  A     C+ WL+H   S+A                     + +S   AV F C   L  +YH  LI  N TT+E+            N      NP+D GC +N   +    + TPP  +L  L
Sbjct:   26 TCRIWRPQRAKHCRYCDACVRKFDHHCPWVGTCVGERNYRYFAGFVISISLYAAYIGGTCLYWLYHKCNSLANDKNTKWTEQISKSIKQNPCALAISIYAAVVFLCVSSLA-LYHIHLIIINQTTNEN----------VKNTYTSTVNPYDHGCTNNF--KQVFCYPTPPRFVLFHL 189          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig805.20.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FSB4_ECTSI1.100e-31174.27Palmitoyltransferase n=2 Tax=Ectocarpus TaxID=2879... [more]
A0A836CCL2_9STRA7.090e-6434.35Spc98 family-domain-containing protein n=1 Tax=Tri... [more]
W7UCL7_9STRA4.390e-4341.37Palmitoyltransferase n=2 Tax=Monodopsidaceae TaxID... [more]
A0A7S1UAK2_9STRA1.270e-3137.27Palmitoyltransferase (Fragment) n=1 Tax=Phaeomonas... [more]
F0YHB7_AURAN1.910e-2636.77DHHC domain-containing protein n=1 Tax=Aureococcus... [more]
A0A1E7FJW9_9STRA3.790e-1637.11Palmitoyltransferase n=1 Tax=Fragilariopsis cylind... [more]
A0A6G1S8S8_9ACAR1.670e-1532.68Palmitoyltransferase n=1 Tax=Aceria tosichella Tax... [more]
A0A1R2B464_9CILI6.900e-1530.82Palmitoyltransferase n=1 Tax=Stentor coeruleus Tax... [more]
A0A813KWW0_POLGL1.000e-1437.20Palmitoyltransferase n=1 Tax=Polarella glacialis T... [more]
X6LTY6_RETFI1.150e-1433.90Palmitoyltransferase n=1 Tax=Reticulomyxa filosa T... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig805contigP-littoralis_Contig805:71076..84335 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FSB4
PFAMsAnk_2,Ank_4,DHHC
Model size2746
Max annot lvl2759|Eukaryota
KEGG koko:K20032
KEGG TC9.B.37.1,9.B.37.3
Hectar predicted targeting categoryother localisation
Exons12
Evalue1.24e-314
EggNOG OGsCOG5273@1|root,KOG0509@2759|Eukaryota
Ec32 ortholog descriptionmembrane-localised ankyrin repeat palmitoyltransferase
Ec32 orthologEc-20_004890.1
EC2.3.1.225
Descriptionprotein-cysteine S-palmitoyltransferase activity
Cds size2220
COG categoryZ
BRITEko00000,ko01000,ko04131
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791653.294088-UTR-P-littoralis_Contig805:71075..711181680791653.294088-UTR-P-littoralis_Contig805:71075..71118Pylaiella littoralis U1_48UTRP-littoralis_Contig805 71076..71118 +
1680791653.309601-UTR-P-littoralis_Contig805:75481..754921680791653.309601-UTR-P-littoralis_Contig805:75481..75492Pylaiella littoralis U1_48UTRP-littoralis_Contig805 75482..75492 +
1680791653.4629154-UTR-P-littoralis_Contig805:83863..843351680791653.4629154-UTR-P-littoralis_Contig805:83863..84335Pylaiella littoralis U1_48UTRP-littoralis_Contig805 83864..84335 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791653.3228564-CDS-P-littoralis_Contig805:75492..759751680791653.3228564-CDS-P-littoralis_Contig805:75492..75975Pylaiella littoralis U1_48CDSP-littoralis_Contig805 75493..75975 +
1680791653.333759-CDS-P-littoralis_Contig805:76662..768491680791653.333759-CDS-P-littoralis_Contig805:76662..76849Pylaiella littoralis U1_48CDSP-littoralis_Contig805 76663..76849 +
1680791653.346937-CDS-P-littoralis_Contig805:77340..774831680791653.346937-CDS-P-littoralis_Contig805:77340..77483Pylaiella littoralis U1_48CDSP-littoralis_Contig805 77341..77483 +
1680791653.3578708-CDS-P-littoralis_Contig805:77970..781031680791653.3578708-CDS-P-littoralis_Contig805:77970..78103Pylaiella littoralis U1_48CDSP-littoralis_Contig805 77971..78103 +
1680791653.3679419-CDS-P-littoralis_Contig805:78628..787621680791653.3679419-CDS-P-littoralis_Contig805:78628..78762Pylaiella littoralis U1_48CDSP-littoralis_Contig805 78629..78762 +
1680791653.3829458-CDS-P-littoralis_Contig805:79117..792451680791653.3829458-CDS-P-littoralis_Contig805:79117..79245Pylaiella littoralis U1_48CDSP-littoralis_Contig805 79118..79245 +
1680791653.3945765-CDS-P-littoralis_Contig805:80656..807951680791653.3945765-CDS-P-littoralis_Contig805:80656..80795Pylaiella littoralis U1_48CDSP-littoralis_Contig805 80657..80795 +
1680791653.4088259-CDS-P-littoralis_Contig805:81550..816931680791653.4088259-CDS-P-littoralis_Contig805:81550..81693Pylaiella littoralis U1_48CDSP-littoralis_Contig805 81551..81693 +
1680791653.424708-CDS-P-littoralis_Contig805:82326..826861680791653.424708-CDS-P-littoralis_Contig805:82326..82686Pylaiella littoralis U1_48CDSP-littoralis_Contig805 82327..82686 +
1680791653.439821-CDS-P-littoralis_Contig805:83134..832631680791653.439821-CDS-P-littoralis_Contig805:83134..83263Pylaiella littoralis U1_48CDSP-littoralis_Contig805 83135..83263 +
1680791653.451109-CDS-P-littoralis_Contig805:83622..838631680791653.451109-CDS-P-littoralis_Contig805:83622..83863Pylaiella littoralis U1_48CDSP-littoralis_Contig805 83623..83863 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig805.20.2prot_P-littoralis_Contig805.20.2Pylaiella littoralis U1_48polypeptideP-littoralis_Contig805 75493..83863 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig805.20.2

>prot_P-littoralis_Contig805.20.2 ID=prot_P-littoralis_Contig805.20.2|Name=mRNA_P-littoralis_Contig805.20.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=740bp
MNFFGGKRGGNHSHSHGPGQQCSHDHGSAAAAGGGMLSYPAGGALGQGQQ
SSSSSSTRVAQPGMEMMPTSQQQPSGLDGLPLGGGGDGGDGGGTIGMENI
GQHLQGAPADVLAAAERLSLISPMMLGAGGGGAGGVMDMDGMGGVVRTAP
GAESTDTGLLSEATIASQLLVAVRSRDTSTLRRLCSSTSEHLSAALKRRD
GQGHTLMHWAAKSGELEMLELLANSGCPTNEFSTDAVGMTPLHWAATEGR
LRASAWLLGPGGADPESRDNQGCTALVIAAQYGFVELVIYLSHHGCDPGS
VDSVGDSAMHWAAYKGHVQVLSMLVKAGQDPEEEDVYGQTPLHLAALRGN
RDAAEYLVIEARANVNARDKKNETPLDLARKKNQARNDRISAHSIDARMA
IENGAGQSWLSPAVFLKLARTPRVWKAACETGEGVQGAGWPLPLNVVLTS
FVMWMTLQRFFGEEYLSLGHNILLLVSTVAQLFMWLALFLTWASNPGFVD
PTDPKVSLAFHRRVGVLTGEKGKGTTGIEEDLGHGSYSDLDIEDPSSSLM
GLESGAGSVASSACYTCSIERPLRSRHCRNCRRCVRAFDHHCAFVGNCVG
AGNYRWFFSYIVCLVLSTASYTAMCVDWLWHLGLSVAVVVSAAYAVFFGC
FGILLFVYHAQLIRQNLTTSEHHALGRVDYLAAPNQSGQYYNPFDQGCVD
NCLARVSGTHDTPPPGLLARLRATESPPARRDEQYRMMT*
back to top

mRNA from alignment at P-littoralis_Contig805:71076..84335+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig805.20.2 ID=mRNA_P-littoralis_Contig805.20.2|Name=mRNA_P-littoralis_Contig805.20.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=13260bp|location=Sequence derived from alignment at P-littoralis_Contig805:71076..84335+ (Pylaiella littoralis U1_48)
GTTGCTGTAGACGATGTATAACCTCGAGTCGGAGAGAAGCTAGGTGAGCA ACAGGCAGATGTATGTGTCAGTGTGCTTGTGCGTATTGTGCGTACTTGTA ACAACCGGATGATTTCTGAGGGAGCGATCAAAAGTTTATTGGTGTTTGGC GTACGGTTCGCCGTACATGCTGCTTCTTTACTTCTGTACAGCTGTACAGC ATAATGACATGATGATAAAGCTACAAATTGGAATTTGGAGATTTCTTTTG TTCCGGCTGCTGTTGTCACCTCCCGCACGCCGATGGATGCTCTCTCCTCT TCTCGCTCTCTCAATGCTGTCAATGCTGTCAATTCCAGCAGTACTGCTGT AGCAGCATTTATATCGGAAGATCGATATCACCCTTGTACGGTGATTGGCC CGGCAAACTCCTTTGTATTCATTTATCGTTACTTTCCTGGGATACATCGG TATCTGAGGTACCTTCCTGGAGAAATATCAAATACTGGATGGAGTACTTC GAAGTATCATATAGACGAAGTATCATATGATATGAAAGGCGCTCTTTTTC CCATTCCCCCCTCGGGACAAAGCTTTGTTGTTGTCAATACCGCTACCATC AGGCGGGCTGTTGAAGGTACAGCGCGCGGTATCGCTTTTGACATCGATCG CAGCGCCCCGGAACTACTGCTGCGGGTTTGAGATGCAGGCCCTTCTCTCT TCTGCTTCTGTGACGGATCATATAAATATATGTGTGTGTTGTCATCCCTT TAATTGGACGCAACTCTGCACCTTTCGGGTAGGTAGACGCTCCAACCGGG GTCACACAGGGGGAAGGAAGTCAACGCAGGATTTCTTTTTCTTTTTCTTT CTCCACTTCCCTATTCGGTGCTTGCCTTGTTTGGTTGAGCTTTTATCGCG AGAAAGGGGACAGCAATCCCTTTCCCTCGTCGATGGAACGATTGAATTTT GTTTACTCACGAATTGATCGCTTTCCACTTTCACTCGCAATGTGAGAAAA AACCCAGATCGTGTTATTCCACTGGGATTTGAACTCACTCGTGACTGTCA GAAGGTTGCGTGGATAACCAACTGAACCACTGGGGTGACCGGCAGCTTAT ACAAACTGAAAAGACGACCAGCAGCATCGTTCGTACAGGTGTAAAAATCT AATAAACGCCAGCTCAATCCAAATGCTGCGTCGACAGCCGATGGCGGATG TCCAACTGCTGTTACAGCAGTATTACCGGTAGCGTCCTACTTGAAGCATG ACCCTACAGTACTTCTCTTGTCCAGAGCCCGGGTCACACAATTCGCCGTC TCTACCTCTCTCCTATGTTGCGCCTTCACTTTCATAGCGCGATTGGTGCA GCGGTCATCTGTGTGTTCCCTGTCAGATCACATCATAACTGCTACGGCTG TCTACTGCCGCTCGCTTATTTACTACTGTACTTCGAAGTACAAGTAAAAG GACGAGCACTGCTGCTGTAAAATAGCTGTCCCTGGAAGTGCTTCGCCGAA CAAAGACAGCAACACGCGGTCTATATGGCATCCCTACTGCAGTACAGTCC ACCGGTCGCCCCGGTGGACTAGTGGTCCCCTCGTCAACCATTAGATGCAG AGGAACGGGGGTTCAATTCCCGGTGAATGTGTTCCTTTGCTACTTTGAAA GCGGCTATCCTGTTAGTAAAAGCAGATTCGGCTTCGCCGACGAGGGTAGG GACCGCAAACCCCTGCTCGCGAGAAAAAATCTCACGCATGTACCGCAGCA GGAAGGTGGGGTTAACTCCTCCTGTGTTGACGTTCCTCCTGTGTGACCCC GTCGATGGGCCTAGCCTGTAGTTTGAACCGCAAGGTGCAGACTAGTGTGC CAGAGAATATGGGATGACAACACAACAGTATCGCCATAGTCGAGAACGTT CGACTACGGAAGGCAGAAGTGATTGAGGTCGTGCTTATACGACTGCACGA CCCCGACCCTGCCGCCCGATGATTCCGTCACCCTGAGGCAAGCAAGCAAG CCCACCGCGGACTCTTTGCTGAGGTGCCTGAATAATGTACACGTATGATA TTATACACGCATCGATCCGCAACGCCCCCGACTATATATGAAACCACATG ATGGGCGATGATGCAGGCCACGAGGTTCTCCAAGAGGACTGGCTGCAACA ACTGCTGTGTGTATCGAGGCTTCTCATAACCCTGTCACGAAGCTAGTCCT ATGCTCTACGCCGGCCGCGTCGCGCGCACGGGTGTGATGATTCGCACAGC GAACGACTACGGTACCCACCAACTATCGTCGTGCGCCAAGACATGATCGG AGGGAAGAGGAGGGCAGGCCAGTCCGCGAAAACGCCTCCAGTATCGTATG GCAGTACAGTACAGTCAGTATCACGGAACATTGCTCCGCCCTCGGGATGT TGACTGCTGTAGATGCGGCGGCATAAATGCGGACCGCGCAGATACGGCCG AGTGGTGTCACCGGGCGTGTCTTGAGCAGAAAGGTGTGCGCATGGAACGC GGAAACTCAAAACACTCCCCCTCATTGGCAAAAAACAGGTGAAACTTTCC TGAAAATATTTTCTGCCACCGGAGCTTCTTGTTTGTCGTTCCCTCCGCAA AAATATTTGTAAAAGGCACGCGTTCCTCGTCTCATACTGAACCACTGCTG TAGACCGTATGGAACGGACTGCTGGCGAGAACCAAACAAGCTTCTGGATC GAGCACGAAGCACAGCCAGCAGCTTTCTCCTCCCTCTCTCCCTATCTCTA ATCACAACCAACCCTAGAACACTCACAAACATACACACACACGCTCAGCT CCCCCCCCACAACCCCCGCCTAGCGCCACGCACCGAATCCTGAGCCCTCT CGCTGATGAGCGGAGTCACCGCGAAGAAGTATAGCCGCAGAAGGAACGCG GTTACCACCATCATTCCGTTTGTTTGTTGCTCACGCTGTCAACCTCGTCC ATTTTGTTTATCCGCTTTGTAATCAATCGAGCACGGAACGGACGACTGCA GAATAACCATCTACAGTAACACTGCTGTATTGATGTGATGTGCTGCTCTG CTGTGTATCGTACTTGTGCGAGAGATGGGTGTATATGTGAGTGCGTGTGT GATTCGTGTTTAAAGGAATCACAGCAGCAGCAGCCAGCAGGCTCTTCGCC TGCAATCAGGTTCCACATTTTTCCCATCCGTTTTGGATTATCATTTTTTT ATCCAAGACGCGACGCATGGACCAGGGAAAAGGAATGCGGAATTCTAAGT TTCACGTTCCACACCTCACGCGCCAATTTTTTCTTCAATAAACGCCCTCT CGTTGTACTCTATTGTGCTAGGAGGGGGACAGACTGAGCCATGCATATCA GGCAGGCTTATTCCATATTGGTACCCCTCTGCAGTAGCATACCAGATAAA GGCAAACATATGTGCCAGGTATCAGGGTTTGTGACGGGGTTGTTGGGTGT ATTTTTTTACCGAAAATCAGGGTTCGGTGTCGACCCGACCCAACCCAGCC CTGTCCCGACCGCTCCGCGCATTCTGGACAACGTTAAACAAAATATCGAA TGTTTTCCGCCCTTTTTCTGGTCTGCTACGGGGTGTTATGATATGACATT CCATATGAACCCGACCGGTGCTCGCCATGCTCATGATTTTTTTCGGTGTG TTGCCATTAGCATTCTCTTATATACAGCCGTGGTGTCGATTGAAAGGTTG CAGACATGTAACAGGTGGCACAACCTCGGTACCTGTGGGAATGCTGTCAA AACTCTACCTTGGTACAAACATATCCATGTATTTTACGGCTGATTGTTTT TTTTTCTCTTGGTTTTTGTTTTCTCATTTTCTGGGCGCATCCGATTGTCT TATCTCCCTCCAATCAGCTCTATCTAAAGGGTAGGAGACATGTTGGTTGT TTGAGAGTTTCGGAAGAAGCCGTACAATGACAACTCCTCCATCATATTGT TGTACGGCAAGTAAGACGGAAAACGATAAAAAAATAACAAAAAAAAAGTA AAATCAAAATCATAAATCATAAATCAAACACAAACATCATAAAGCAAAAA TAGTAATAATAGTAACAATAACAACAATAATAATTATAATTATAATTATA ATAATAATAGTAATAATTGTAGCAACACAAACATATCATGGCATAGATGG AGGGGGCACCACAACAAACGGAGAAGGGCTTCGAGCTCGATACCACACCC GAAGCGCAACGCCGGAAGCTGTTGTGGTCTCCTTCCGACGACGGGAAGGA ACGCACACACATACAAAATGCAAATAGACGCCAAAAACAAACACACTTGC TGTAGTATCGCTTATACACGCGCACGCACGCATGCACTATTTTAACCCCC ACAGACCCCCCCCCCCGCCGCCGTCCCCCCCGCCTCGTGGATCCGACCTG GAACAGCTACCTAAACGATGAATTTCTTCGGTGGAAAACGAGGTGGCAAT CATAGCCATTCCCACGGCCCCGGACAGCAATGTTCCCACGACCACGGCTC AGCTGCCGCTGCCGGCGGCGGGATGCTCTCTTACCCGGCTGGGGGCGCTC TCGGACAAGGCCAACAAAGCAGCAGCAGCAGCAGCACTAGGGTTGCTCAG CCAGGGATGGAGATGATGCCGACGTCGCAGCAGCAGCCTTCCGGGCTCGA CGGGTTGCCTTTGGGTGGTGGTGGTGATGGTGGAGACGGAGGAGGAACTA TAGGCATGGAAAACATCGGACAGCATTTGCAGGGTGCGCCCGCCGATGTA CTAGCTGCGGCCGAGCGTCTGTCTTTGATTTCCCCGATGATGCTCGGGGC TGGGGGTGGCGGCGCGGGTGGCGTTATGGACATGGATGGCATGGGGGGGG TGGTGAGAACGGCGCCTGGGGCGGAGAGCACCGACACTGGCTTGCTGAGC GTGAGTCGGGTGTCTTTATTGCTTTATGCTTCGCTGTCCATGATAAATAG CGGGCGTGAACAACATTTTTTTTATCGACAATCGTAGGTTGTACTTGTAA TTGCACCGCCGTGTGCCCTGCTGTAGGTGACGGACGCGTTGTACCTCCCC CCCAAGCGGTTTCGTTGTGCTGCCCCCCCGAAGCAGTTTCTTTGTTTGTT TTTGGGCGTTGGGCGAGGAATGGGGTAATGGCGTTTTCACGGTCTTTTAA TGTTGCGCAGTCTGCCAAAATATTGGCCCAGGTTTATCCAACTTGATGGC TTTCCTAACCGTTCACGGGATCGGCCGTACAGCAGTATTTTTTATACATT TCACATGCAGCACTCGTGTATTGTGCAGATCGGTTGTGTTCGTTCCCAAC TGGCTGTCATTCGCACGTAAACAGAAAAAATATGTCATACGAAGTACCTT GATGCGGTGGGTGGGACAACTGCGTTGGTGCCCGGGGTGTAAGACACAAC AGCGCGCCTGGCCCGCTGATCGCTTCGTCGAGTGCCTTCCTTCCTTTCTT CCTTCCCTCCTGCCGTAGCTCCAAACCTTTTCGCATGTGTCCTCCATCCA TCTCACCCGGCTAATCTATCTTACCTCCTTGTTGTTCCGGCTATGATAAT CCTTGTTTTTTTCATTGCTGTACTCGTACCCCCACAGGAGGCCACTATTG CGAGCCAGCTCCTCGTGGCGGTGCGCTCCAGAGATACGTCCACTCTGAGG CGGCTTTGCTCGAGTACTTCCGAGCACCTGAGCGCCGCGCTAAAGCGGAG GGACGGGCAGGGGCACACGCTGATGCACTGGGCGGCCAAGTCTGGGGAGT TGGAGATGCTGGAGCTGTTGGCCAGTAAGTTAGTTGCGGCCATCAATTCA CTTCTGTGCGTTCGTCGTTTCCGCCATGGTCGCAGCAGAAGTGCGAGAAA CATACGGCGTGGCGGACTTTTGTTTTGGATCAACGAAATTTACGAGACAA TCGTCAATTTTTGGCCGCGTTACTCAATCGTGACTTGGTGCCACACCTTT TTCCCGTTGTTTTTGTGCACGTGGCGAGCTTGTCTTGAGGATGAATCAAA TGCGAGAGAAAACCGTCAATCTCTAAGGCGCTCTCTATGATACTCACGAT ACACGTTCCCCACGTTGCCCTCATCGAAGCTTTTTGCAAATGGCTAGAGG GCTGAGGTTAGACTAGACTGCGGATGCGGCACGGCTAGCAGTGTGCGGCA TCTACCGGAACTGACGCGACAGCTCCATACGGCGGTTGCTCCCGACATCC ACCAGCTCCTCCTTGTTCATATTTGCACCCCTCGATCGATATACCTAAAC TGCCGGCGTTTCCAGATTCGGGTTGCCCCACGAACGAGTTTAGCACCGAT GCCGTGGGCATGACACCCCTGCACTGGGCGGCCACAGAGGGGAGGTTGAG AGCGTCGGCGTGGCTTCTCGGACCTGGAGGCGCAGACCCAGAGAGCCGGG ATAACCAGGTGACCCTTAGGGGATCGGATCACGTTGATGTTCGGTCCTCA GGTGTATGTATTGCCTTGCGAGGCTGTGAAAATGTTGTTCCTCCTCGTCC CCTCGTGAAAAACCCGCAGCATTGACGACACTTTTCAGTGTCATCCCAAA GGTGCCACCAACACAACACAGGCAACCAGGATATCGGGGTATTTGTTTTT ACCTTTCGTCGAGGGGGTAGCCGCAGCCGGGGTATTTGCTCGAAGGGCGA GTGCAGTGCACAAGTCGTGCCCGATTTTTGCGGTACGGATCTCGAAGTGA CACCTACCTACCGGTAGCTTCAAGGCAAAAATTCGGGCTAACGGGTTTGT ACCGATTCGATGTCGCGTATAAAAAAGCTAGGTTTGGCGGTAAGTACCAC CTCAAGTACCCTACTGCTGTATCTTTGGAAAAGTTAATGTTATATTCACG GTGCTCTCCGCCCCCCCCTGCCCCATTTTTTTTTGTGTGTTTCAGGGCTG CACAGCCCTCGTCATCGCGGCGCAGTACGGTTTCGTGGAGCTCGTGATTT ATTTAAGCCACCACGGCTGCGACCCAGGGTCTGTCGATAGCGTTGGAGAC TCTGCGATGCACTGGGCCGCCTATAAAGGTCCGTCAGATATATAAATACT TCGTACTTGGAAGTATATGTTTTGTGTACCTGGTACCGGGGTTTGCCGTG ATGATGTCGTCAGCGTCAAGAGAAGAGTCGAGAATGAGGGTGAGCTGGAA CTTGAGTCCGCGAGTCAAAGCGCGGGGGCAGTGCTGCTGAGCCGCCGCAT GTGTATCGTAAAGTGGGCTGGGGATGTCGTGCTTCACCACATCCGCGGCG TTAACCTTTTTTTCTTTTTTTGCACCGGAGGTCTGTTAGAAAAAAAAAAA TTGATTGCGCTCGCTGAGATAGTCCCCCTCTGACAGCAGTGAGGGTCATG TCCTCGTTGCTGTTGATTTTAGTGGAGGCAGGTGTCCCGCCAGGGCGGGA CACCTGCTATCGCAAAAAAAGGCGTTTTGGTGTGTGTGTGCGTGTGTGTG TATGTGTGACGCCCATCGAGTCAGCCCTGAAGCCTAAAGTGTGTGGAAAC TACCTACACAGCATGTGTGTATGATAGTATACTCGCCTTTCGATTTGGCT CAGGGCATGTCCAGGTGCTGTCGATGCTGGTGAAGGCCGGCCAGGACCCT GAGGAGGAGGACGTCTACGGCCAGACTCCGCTACACCTTGCCGCTCTCAG AGGGAACCGAGACGCCGCGGAATACCTTGTCATAGAGGTATCATATCATA TACGAAGAACTTCGTATATACTGGGGTATTATTTATGAAGTACTTTGGAG GACAGCAAGTACGTACTGGACTATACTTCGAAGTACATGCGTGTGGTGCT GTCGAGGCTTTTTGGTTCTATCGAGATGTGGGTTCAGCCAGGAATCGCCA CAATGGGCGTTAGTTGAGCGAGAAGGGTGACGTCACCGACGTCTTTTTAA CGTAGTTAACGTTGAGTCACTCGTCGTCGTCATGGCCATTGGAAACGTCC GTACTTGTACATGAAGAGAGATTTTGTACCTGCCTTGTGCTGTTCTCTCG TCTCGCGGACTCTTCCCGCGCCCCCCGTGTGTGTGCATACAGGCCAGGGC AAACGTGAACGCGAGGGATAAGAAGAACGAGACGCCACTGGACCTTGCTC GCAAGAAAAATCAGGCGAGGAACGACAGAATATCAGCACACTCAATCGAT GCAAGAATGGCCATCGAAAAGTGCTTGCTTCACACGAAGCACGGATGATG TGAACATACGAAGTAGTACGTACAAACATACATCCATACATCCAGTATAT GCATTACATACATACATGCGTACAAACATACTCGAAGAACATATCATACA AAGCGATGAATCAACGGGCCTTCCGGTTGGAAACTGAACATATTGAGGGC GATGTCATGGGTAGTTATTGGTACACATACTCCCTCTGTATCATAAGTCT GTGCCGTTATGGGCGTGTAATTGTTTGCGCGTCCATACTGTTTCGATCAT CCTATAGTTAGGTTCGTTCGAAAGATGAAGTCTCAAAGAAGCTGATTTAA AAAAAAAGAAAACAAAAGCCAGTTGTTTTTATACTAAAATGAAGTCAAAA TATGCCCATTTTGGCCCATTTTTGAGAATTTTGATTCCGCCAGATGTCTT GGTTTTAGCTTGAGTCCCAAGTATCTTCGTTTTAGTGTGGAAAACCCAAG TGTCTTGGTTTTAGTGTGGCGTCACTATTATACTGATTTTAGTAAGGGGG GACTCGACATGAATCTTTGAGTTAGAGGGGCTAGGTTCAGGGTTAGGGAT AATTTTGGGGGGGATTGCATTGTGTTTTTGTTGTGCCCCCGCCCCCCCCT CCACCTCTGGAAAGGGTCAAATACGGCCATTTTTGGCCTGACTACTTTTT TGCTAGCCGCTAGCCCATATGCAGGGTAGTGCGCAAGAAAAAAAAAATGT GTTTCAACCCAAAAAAACTCCGAAGATTTCGGAAAAATTATCGCCGAAGA CATGGGACACCGTTGAGGTGGCGTAAAAACATAACGGCACAGACTTATGA TACAGAGGAAGTACAAGTTTTGCTCTATCATTCAGGCATGTATCATCCAA GATGGAATATATGCGCTGGAATTCTGAGTGGAAGGGTGTGTGTCTGCTCA TCGCGGACACCATAAAATGCGCGAACGAACCGTGCGACGGTTGCCCGAAG GCCATTTCGGGGCCGCCTCGGCCGTACTAAATACGGCAGACAACCATTCT AAATAGCTCCAAGAGAGGGTGCGGTTGCTCTCTCTCTCTCTCTCTCTCTC TCTCTGCGAAACACGGGGCGGTGGGGGTGCTTCTTGCGTGAACATCGAAC GTATCGTATCGTATCGACGTTGAGCAGAGACGCCGTCAATTTTTATTCGA CCGCCGCATCCTTGCGTCGACGTTTTGCAGAGACGTGGTCAATTTTTATT CGACCGCCTGGTCTTTTAAGAATTTGTACGAGTATGTGTGATGCCTCGCT TTTTTACTACTCCGGAGTATTTTTTTCATTCGATAACCTCCTCCCCCTCC TCCTCCTCCTCCTCTTCTCCCTCCTCCTCTTCCTCTTCCGCCCTCTCCCC AGCCTTCCATGGAGCTGTTCTTGCGCACCAGTGGGGCCGGCCAGTCTTGG CTCAGCCCTGCCGTTTTCCTCAAGCTGGCGCGCACTCCCCGAGTTTGGAA GGCGGCGTGCGAAACGGGCGAGGGGGTCCAGGGCGCCGGGTGGCCGTTGC CTCTGAATGTGGTGCTCACGGTGAGGACTTGAATGCAAAGTGTTGGCGGC CTCGGCATGAAGCGCTGTGCAGGAGAGAGAGGAAGGCTGCGCCACGCCAA GGAATACAAGTACCGCGCCTGTGGCCTTGTTATTTTTTTGGTTTTTTTGG TGAAGCGGATGTTCTGACAGATGGAGAGAGAGAGAGAGAGAGAGAGAGAG AGACGGGTGTCTCCGAGGAGGTGGTTGGTTCGCGGCAGAGGATTTCGTAA GAACCCGCCGTGTTTGACGCGTGACGTTGATCCTCGACATCTGCTGACTG TGGTTTGGATTCCACGTCTTTCTCGCCTCTGGTGGCATATGCCGAGCTGA ACCCCCGGCGAAACGGAAATTTTTACCCCGCCGTCTCCAGAGAACGTCGG TGCTCGCAACAATTGAAGGCCCAACATTTTCTCCGTCTCCCGTGTGCCCC CGTGTGGGTATATGGCATTACTCTTTGGAAGTATCTCTTCCTTCTCGTGA TGAAGGAAATAATAAAAACTGATGTTTACATGCCTGTCTGTTGTGACCCC AGCTGAGGCGCCCAAGTTACACCGAAAGGTACATGGGTAGGTGTAGATCG GCGTCCAGATGTGATGCGGTGACAACACACACCCACACACATGAACGTTC GAATCCTGTCGACCGTCACTCGCGTCATCTCTCTTAGGAATGCGAAGGTC TTTCCGCTTTATGTGATACGAGTTCATTCCCCCTCCCCCACCCGCCGCAT CTGCCCCTATCGAAACCCTCCGTAGTCTTTCGTGATGTGGATGACCTTGC AACGGTTCTTCGGGGAGGAGTATCTCTCCCTAGGGCACAACATATTGCTG TTGGTGTCCACCGTAGCGCAGCTGTTCATGTGGCTCGCGCTCTTTCTGAC GTGGGCATCCAACCCTGGGTGAGCAAGCGAGTTCGTGTCGACGACTTTCG TTTTTGCAGTTTGGGACAGCAGTAGTACGTTTGTCGGCTTGATGCTTGTT TACGCGATTACGTGCTGCTGTATGCTCTGAGGATTTCGGTTAGGCATTGG TTGCGGTGAAGGCGAGTGGTTTCTCGTTTCTCAACAAACCGATATATTGT TTCGTTTCTACGCTGCTGCGGTGTTGGTTGGGGTGCTGTGCGAGGTAGAC GGGGCCAGGGAGAAGATGCGCGATGGTAGATGCGGGGGCCGACAGTACGG TAAATGCTGTGGGGAGTTGTGCAAGTTTTTCTGTATGCCGGATCAGCTGC GCACATGTGTGAGTGGTGTCCCAACTAATTCATGTTGAAGACTCGTTTCG ACAGAATGGCCCCAATCATTTACCTGGCACATGTAGTTCGAGGTTCCATG TCATGTCTACGTAAAGTTGACATACTTATGCCGAAACTTTTTTGTTTCTG TATTTTTGGCCTTCCTTTTTTATCCTCTTCACCTTTTTTTTTATCGGTCT CTCAATCAAGCCTGTCCGGTCCGTGCCCTACCGCAAGAGTTCCGCCGCCG CCCCGCGCCGGTGAATTTAATGCCAATCTCGATTTATTTATTTTTCCCCA GGTTCGTAGACCCCACGGACCCCAAGGTGTCCTTGGCGTTCCACCGACGA GTTGGCGTTCTCACGGGTGAGAAGGGGAAGGGGACCACCGGCATCGAGGA AGACCTCGGCCACGGATCCTACAGCGACCTCGACATCGAGGACCCGTCGT CGAGCCTGATGGGTCTGGAGAGCGGAGCGGGTTCCGTGGCCAGCTCGGCG TGCTACACGTGCTCGATCGAGAGGCCACTGCGGTCCCGGCACTGCAGGAA CTGCCGTCGGTGTGTGCGGGCTTTCGACCACCACTGCGCGTTCGTCGGGA ACTGCGTCGGCGCGGGCAACTACCGGTGGTTCTTTTCGTACATCGTGTGT CTCGTGTTGAGGTGGGTTTGTACCGCCTTATTTCTTCCCGAGCGTGCCGC TGGTGCTGGTGCTGGTGCTGGTGCTGGTGCGTGCGGTGGTGGTGTGGTTG GCAGCGGCGACCGTCATCCCTGCGTTCCTCACTAGGATTATTTTTCACTT GGTATCGACGAGTTTTACATTTTCTTCGTTTTAATTGGTATCGACGAGTT GGCACTTTTCTCCTGTGTTGTCATGACACCACATCAGCACAGGCTATACG CCGCACTACGAGGGAGGGCGCAGCGGCCTACGCTTTCTCTCGGAGCGCAC ACTTCATATGAATATCCTTGCTTTCATCACACTAAAAGTTTTTTTTTATT CACCTGGCATGATACAATTTTTTTTTTTTCTGGATGCTCTTGCCTCTTTT ATCTTTCCAACTTCCGCAAAAATCACCCTTTCGTGCCCCCCCCCCCGGTT GCCCGTCAGTACCGCGTCCTACACCGCCATGTGCGTCGACTGGCTGTGGC ATCTGGGCTTGAGCGTGGCGGTGGTGGTGTCTGCAGCCTACGCGGTGTTT TTCGGCTGTTTCGGGATTTTGCTCTTCGTCTACCACGCGTGAGTTCAATC GAGTTGGCGTTGATGCGGGACCACTCACACTCAAAACCAAAGCTTTTTGT ATAGGCGCGTAGCCCAAACCTTGCCGTTTTGTCGCGGTGTTTCGCACTTC GGTGGGGGAGAAGCAGGGGGGGGGGACCCCCTAACCTTACGTTGTCGGGT TGACGTTTGGCAAGAGCTTCTGGTCACGTGCGCACGACGAATTAATACCC TCGGCACTCGCGTGCGGCATCAGTTCCTTCCCGACGTACACGCCCGCCCA CCTCACCTGCTCATGCTCATGCTCATGTTCATCGTCCCTCGACCTGTCGT GCGTCGTTTCGGTTGATTTTTTTGTTCGTTTTTTTTTCTTGGTGCAGCCA ACTTATCCGGCAGAATCTCACCACCAGCGAGCACCACGCTCTGGGGCGCG TGGACTACCTTGCGGCGCCCAACCAGAGCGGCCAGTACTACAACCCGTTC GACCAGGGTTGCGTGGACAACTGCCTTGCCCGCGTGTCCGGCACGCACGA TACTCCCCCGCCCGGCCTCCTGGCGAGGTTGAGGGCAACCGAAAGTCCTC CGGCACGGCGGGACGAACAATATCGCATGATGACGTAGAACATGCTCGTG GTGCGGTGGGGTGCGACGGTTGTTTGTGTGTGTGTGTTGCTTCGCTTTGA ATGCTGAAGTAGCTCAGCGGGTAACACTGCTGTGGCTTGAAGCTATCATA AGGGGTGTTTCTTTACAACTTTTTGAGTACGCGATCGTCGTGGCTTGTGC CTGCGCCGCCGTCCATGTGGTTGTTTTTGTGTACGGTCGGCGCCTGCGTT GTTGCTGTCAACGAAAGGAAAGGCGTGTTGCCTGTAAAGGCCGCTGCAAT TTTGAAGTCGGTTCGCGGTTGTGAAGTTTTTTTTTTTTGTGGGGGGGGGG TGGAAATCACACCACACTTGCTGTGATTGGATTGCCGCTCAATGTTGGAT TGTCGTCTTTTCATGTTTGAAAACGCTTTTTTTTTCCTTTCATGTGCATG GGTATGATGTCGACCATGTCGACCAGTTGGCGTTTCGCAGGAGAAATAAA TTGCGATGGT
back to top

Coding sequence (CDS) from alignment at P-littoralis_Contig805:71076..84335+

>mRNA_P-littoralis_Contig805.20.2 ID=mRNA_P-littoralis_Contig805.20.2|Name=mRNA_P-littoralis_Contig805.20.2|organism=Pylaiella littoralis U1_48|type=CDS|length=2220bp|location=Sequence derived from alignment at P-littoralis_Contig805:71076..84335+ (Pylaiella littoralis U1_48)
ATGAATTTCTTCGGTGGAAAACGAGGTGGCAATCATAGCCATTCCCACGG
CCCCGGACAGCAATGTTCCCACGACCACGGCTCAGCTGCCGCTGCCGGCG
GCGGGATGCTCTCTTACCCGGCTGGGGGCGCTCTCGGACAAGGCCAACAA
AGCAGCAGCAGCAGCAGCACTAGGGTTGCTCAGCCAGGGATGGAGATGAT
GCCGACGTCGCAGCAGCAGCCTTCCGGGCTCGACGGGTTGCCTTTGGGTG
GTGGTGGTGATGGTGGAGACGGAGGAGGAACTATAGGCATGGAAAACATC
GGACAGCATTTGCAGGGTGCGCCCGCCGATGTACTAGCTGCGGCCGAGCG
TCTGTCTTTGATTTCCCCGATGATGCTCGGGGCTGGGGGTGGCGGCGCGG
GTGGCGTTATGGACATGGATGGCATGGGGGGGGTGGTGAGAACGGCGCCT
GGGGCGGAGAGCACCGACACTGGCTTGCTGAGCGAGGCCACTATTGCGAG
CCAGCTCCTCGTGGCGGTGCGCTCCAGAGATACGTCCACTCTGAGGCGGC
TTTGCTCGAGTACTTCCGAGCACCTGAGCGCCGCGCTAAAGCGGAGGGAC
GGGCAGGGGCACACGCTGATGCACTGGGCGGCCAAGTCTGGGGAGTTGGA
GATGCTGGAGCTGTTGGCCAATTCGGGTTGCCCCACGAACGAGTTTAGCA
CCGATGCCGTGGGCATGACACCCCTGCACTGGGCGGCCACAGAGGGGAGG
TTGAGAGCGTCGGCGTGGCTTCTCGGACCTGGAGGCGCAGACCCAGAGAG
CCGGGATAACCAGGGCTGCACAGCCCTCGTCATCGCGGCGCAGTACGGTT
TCGTGGAGCTCGTGATTTATTTAAGCCACCACGGCTGCGACCCAGGGTCT
GTCGATAGCGTTGGAGACTCTGCGATGCACTGGGCCGCCTATAAAGGGCA
TGTCCAGGTGCTGTCGATGCTGGTGAAGGCCGGCCAGGACCCTGAGGAGG
AGGACGTCTACGGCCAGACTCCGCTACACCTTGCCGCTCTCAGAGGGAAC
CGAGACGCCGCGGAATACCTTGTCATAGAGGCCAGGGCAAACGTGAACGC
GAGGGATAAGAAGAACGAGACGCCACTGGACCTTGCTCGCAAGAAAAATC
AGGCGAGGAACGACAGAATATCAGCACACTCAATCGATGCAAGAATGGCC
ATCGAAAATGGGGCCGGCCAGTCTTGGCTCAGCCCTGCCGTTTTCCTCAA
GCTGGCGCGCACTCCCCGAGTTTGGAAGGCGGCGTGCGAAACGGGCGAGG
GGGTCCAGGGCGCCGGGTGGCCGTTGCCTCTGAATGTGGTGCTCACGTCT
TTCGTGATGTGGATGACCTTGCAACGGTTCTTCGGGGAGGAGTATCTCTC
CCTAGGGCACAACATATTGCTGTTGGTGTCCACCGTAGCGCAGCTGTTCA
TGTGGCTCGCGCTCTTTCTGACGTGGGCATCCAACCCTGGGTTCGTAGAC
CCCACGGACCCCAAGGTGTCCTTGGCGTTCCACCGACGAGTTGGCGTTCT
CACGGGTGAGAAGGGGAAGGGGACCACCGGCATCGAGGAAGACCTCGGCC
ACGGATCCTACAGCGACCTCGACATCGAGGACCCGTCGTCGAGCCTGATG
GGTCTGGAGAGCGGAGCGGGTTCCGTGGCCAGCTCGGCGTGCTACACGTG
CTCGATCGAGAGGCCACTGCGGTCCCGGCACTGCAGGAACTGCCGTCGGT
GTGTGCGGGCTTTCGACCACCACTGCGCGTTCGTCGGGAACTGCGTCGGC
GCGGGCAACTACCGGTGGTTCTTTTCGTACATCGTGTGTCTCGTGTTGAG
TACCGCGTCCTACACCGCCATGTGCGTCGACTGGCTGTGGCATCTGGGCT
TGAGCGTGGCGGTGGTGGTGTCTGCAGCCTACGCGGTGTTTTTCGGCTGT
TTCGGGATTTTGCTCTTCGTCTACCACGCCCAACTTATCCGGCAGAATCT
CACCACCAGCGAGCACCACGCTCTGGGGCGCGTGGACTACCTTGCGGCGC
CCAACCAGAGCGGCCAGTACTACAACCCGTTCGACCAGGGTTGCGTGGAC
AACTGCCTTGCCCGCGTGTCCGGCACGCACGATACTCCCCCGCCCGGCCT
CCTGGCGAGGTTGAGGGCAACCGAAAGTCCTCCGGCACGGCGGGACGAAC
AATATCGCATGATGACGTAG
back to top