mRNA_P-littoralis_Contig805.13.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig805.13.1
Unique NamemRNA_P-littoralis_Contig805.13.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
[Close]
BLAST of mRNA_P-littoralis_Contig805.13.1 vs. uniprot
Match: A0A6H5KCS3_9PHAE (Lipoyl synthase, mitochondrial n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KCS3_9PHAE)

HSP 1 Score: 627 bits (1617), Expect = 1.790e-216
Identity = 319/393 (81.17%), Postives = 348/393 (88.55%), Query Frame = 3 
Query:  393 MRSALASSVAAWAVTC---DAFYIPPS------VAMPPKSSSGVSTEATTPTTVDGDAATLSSYPGPMVPRVGGAMPEQRPGWFRVPAPGGKHTKYEELKSSLKELNLHTVCEEAQCPNIGECWNGGTGTIMLLGDTCTRGCKFCAVKTSPKPPEPDPFEPFHTAEAISRWGIDYVVLTSVDRDDLVDGGSNHFATTVELIKAAKPEMLVECLVSDFRGSFASVDRLATSGLDVYAHNIETVRRLQPYVRDKRAGYDQSLSVLDRAKVAGKKAGVYTKTSLMLGLGETEEEIVETMRDLREAGVDVLTLGQYLRPTDHHLAVVEYVTPAKFDQYAKMGEALGFSYVASGPMVRSSYKAGEFFIENMIRRGRQEEENIVSKAMAAASALDPNDR 1544
            MR +L S+ AA A+TC   +AF++ PS      +   P++SS  S  +   T VDG   T +SYPGP++PRVGGAMPEQRPGWFRVPAPGGKH+KYEELKSSLKELNLHTVCEEAQCPNIGECWNGGTGTIMLLGDTCTRGCKFCAVKTS KPPEPDPFEPFHTAEAISRWGI+YVVLTSVDRDDL DGG+NHFATTVELIK AK +MLVECLVSDFRG +A+VDRLATSGLDVYAHNIETVRRLQPYVRDKRAGYDQSLSVL RAK+AG+  GVYTKTSLMLGLGETEEEI+ETMRDLREAGVDVLTLGQYLRPTDHHLAVV+YVTP KFDQYA+ G+ALGFSYVASGPMVRSSYKAGEFF+ENMIRRGRQ E+  V+ AMA ASA+DPN R
Sbjct:    1 MRWSLPSAAAALAITCASCEAFHVFPSSGSSPCIRSVPEASSSSSGSSMPTTEVDGP--TKTSYPGPVIPRVGGAMPEQRPGWFRVPAPGGKHSKYEELKSSLKELNLHTVCEEAQCPNIGECWNGGTGTIMLLGDTCTRGCKFCAVKTSQKPPEPDPFEPFHTAEAISRWGINYVVLTSVDRDDLEDGGANHFATTVELIKTAKSDMLVECLVSDFRGDYAAVDRLATSGLDVYAHNIETVRRLQPYVRDKRAGYDQSLSVLRRAKIAGEATGVYTKTSLMLGLGETEEEILETMRDLREAGVDVLTLGQYLRPTDHHLAVVDYVTPEKFDQYARQGDALGFSYVASGPMVRSSYKAGEFFMENMIRRGRQGED-AVAAAMAVASAMDPNAR 390
[Close]
BLAST of mRNA_P-littoralis_Contig805.13.1 vs. uniprot
Match: A0A835ZC82_9STRA (Lipoyl synthase, mitochondrial n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZC82_9STRA)

HSP 1 Score: 484 bits (1246), Expect = 6.720e-162
Identity = 237/312 (75.96%), Postives = 264/312 (84.62%), Query Frame = 3 
Query:  591 MPEQRPGWFRVPAPGGKHTKYEELKSSLKELNLHTVCEEAQCPNIGECWNGGTGTIMLLGDTCTRGCKFCAVKTSPKPPEPDPFEPFHTAEAISRWGIDYVVLTSVDRDDLVDGGSNHFATTVELIKAAKPEMLVECLVSDFRGSFASVDRLATSGLDVYAHNIETVRRLQPYVRDKRAGYDQSLSVLDRAKVAGKKAGVYTKTSLMLGLGETEEEIVETMRDLREAGVDVLTLGQYLRPTDHHLAVVEYVTPAKFDQYAKMGEALGFSYVASGPMVRSSYKAGEFFIENMIRRGRQEEENIVSKAMAAASA 1526
            MP QRP WFRVP+PG   TK+ +LK SL EL LHTVCEEAQCPNIGECWNGGTGTIMLLGDTCTRGCKFCAV TS  PP+PDPFEPFHTA+A+SRWGI+YVVLTSVDRDDL DGG+ HFA TVELIK A P MLVECLVSDFRG  A+V RLATSGLDVYAHN+ETV RLQ +VRD+RAGY QSL VL  AK A  +  +YTKTSLMLGLGETE E+++TMRD+REAGVDVLTLGQYLRPTDHHLAVVEYV P KFD Y + GEA+GF YVASGP+VRSSYKAGEF++E+M+R GR  +E     + AAASA
Sbjct:    1 MPAQRPAWFRVPSPGYDKTKFNDLKQSLSELKLHTVCEEAQCPNIGECWNGGTGTIMLLGDTCTRGCKFCAVNTSATPPKPDPFEPFHTAQAVSRWGINYVVLTSVDRDDLPDGGAGHFALTVELIKEAAPGMLVECLVSDFRGDAAAVARLATSGLDVYAHNVETVERLQAHVRDRRAGYAQSLGVLRAAKAA--RPSLYTKTSLMLGLGETEAEVLQTMRDIREAGVDVLTLGQYLRPTDHHLAVVEYVPPHKFDWYREQGEAMGFKYVASGPLVRSSYKAGEFYLEHMVRSGRAAQEQE-GGSTAAASA 309
[Close]
BLAST of mRNA_P-littoralis_Contig805.13.1 vs. uniprot
Match: W7T3L4_9STRA (Lipoyl synthase, mitochondrial n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7T3L4_9STRA)

HSP 1 Score: 482 bits (1240), Expect = 5.880e-160
Identity = 233/304 (76.64%), Postives = 260/304 (85.53%), Query Frame = 3 
Query:  564 PMVPRVGGAMPE-QRPGWFRVPAPGGKHTKYEELKSSLKELNLHTVCEEAQCPNIGECWNGGTGTIMLLGDTCTRGCKFCAVKTSPKPPEPDPFEPFHTAEAISRWGIDYVVLTSVDRDDLVDGGSNHFATTVELIKAAKPEMLVECLVSDFRGSFASVDRLATSGLDVYAHNIETVRRLQPYVRDKRAGYDQSLSVLDRAKVAGKKAGVYTKTSLMLGLGETEEEIVETMRDLREAGVDVLTLGQYLRPTDHHLAVVEYVTPAKFDQYAKMGEALGFSYVASGPMVRSSYKAGEFFIENMIRR 1472
            P+VP+VGG MPE +RP WF VPAPGG HT++EEL+ SL+EL+LHTVCEEAQCPNIGECWNGGTGTIMLLGDTCTRGCKFCAVKTS  PP  DPFEP  TAEA++RWGI+YVVLTSVDRDD+ DGG++HFA TVE IK  KPEMLVECLVSDFRG  A+V+RLATSGLDVYAHN+ETV RLQ YVRDKRA Y QSL VL  AK A  +  VYTKTSLMLGLGE E E++E MRD+R   VDVLTLGQYLRPTDHHLAVVEYVTP KFD + K GE +GF YVASGP+VRSSYKAGEFF+EN ++R
Sbjct:   62 PVVPKVGGPMPEGRRPDWFHVPAPGGSHTRFEELRESLRELDLHTVCEEAQCPNIGECWNGGTGTIMLLGDTCTRGCKFCAVKTSQAPPPADPFEPLKTAEAVARWGINYVVLTSVDRDDMPDGGADHFAQTVEYIKLRKPEMLVECLVSDFRGDLAAVERLATSGLDVYAHNVETVERLQKYVRDKRASYTQSLQVLAHAKAA--QPTVYTKTSLMLGLGEEEGEVLEAMRDMRAHNVDVLTLGQYLRPTDHHLAVVEYVTPEKFDFFRKQGEEMGFKYVASGPLVRSSYKAGEFFLENELKR 363
[Close]
BLAST of mRNA_P-littoralis_Contig805.13.1 vs. uniprot
Match: A0A0G4EX03_VITBC (Lipoyl synthase, mitochondrial n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4EX03_VITBC)

HSP 1 Score: 471 bits (1211), Expect = 6.160e-156
Identity = 221/311 (71.06%), Postives = 262/311 (84.24%), Query Frame = 3 
Query:  570 VPRVGGAMPEQRPGWFRVPAPGGKHTKYEELKSSLKELNLHTVCEEAQCPNIGECWNGGTGTIMLLGDTCTRGCKFCAVKTSPKPPEPDPFEPFHTAEAISRWGIDYVVLTSVDRDDLVDGGSNHFATTVELIKAAKPEMLVECLVSDFRGSFASVDRLATSGLDVYAHNIETVRRLQPYVRDKRAGYDQSLSVLDRAKVAGKKAGVYTKTSLMLGLGETEEEIVETMRDLREAGVDVLTLGQYLRPTDHHLAVVEYVTPAKFDQYAKMGEALGFSYVASGPMVRSSYKAGEFFIENMIRRGRQEEENIVS 1502
            +PRVG AMP QRP WFRVPAPGG +T++EELK SL++L LHTVCEEAQCPNIGECWNGGT TIMLLGDTCTRGC+FCAV TSP+PP PDP EP +TA AIS+WG+DY+VLTSVDRDD+ DGG++HFA TVE +KAA P +LVECLVSDF+G   +V+RLATSGLDVYAHN+ETV RLQ +VRDKRA Y QSL VL +AK A  +  VYTKTSLMLGLGETE+E+++TM+DLR+   DV+T GQYLRPTDHHL+VVEY+TP KF +Y ++GE +GF YVASGP+VRSSYKAGE+F+ NMI   R  E   V+
Sbjct:   47 IPRVGAAMPAQRPDWFRVPAPGGIYTRFEELKDSLRDLKLHTVCEEAQCPNIGECWNGGTATIMLLGDTCTRGCRFCAVNTSPEPPAPDPDEPLNTATAISQWGVDYIVLTSVDRDDMADGGADHFARTVEFLKAASPHILVECLVSDFQGDKEAVERLATSGLDVYAHNVETVERLQRFVRDKRANYKQSLDVLRQAKEAEPR--VYTKTSLMLGLGETEDEVIQTMKDLRDIDCDVITFGQYLRPTDHHLSVVEYITPDKFAKYGRLGEEMGFRYVASGPLVRSSYKAGEYFMTNMINTDRDNEAAAVA 355
[Close]
BLAST of mRNA_P-littoralis_Contig805.13.1 vs. uniprot
Match: A0A7S4VVM7_9STRA (Lipoyl synthase, mitochondrial n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4VVM7_9STRA)

HSP 1 Score: 469 bits (1207), Expect = 1.240e-154
Identity = 221/307 (71.99%), Postives = 262/307 (85.34%), Query Frame = 3 
Query:  573 PRVGGAMPEQRPGWFRVPAPGGKH-TKYEELKSSLKELNLHTVCEEAQCPNIGECWNGGTGTIMLLGDTCTRGCKFCAVKTSPKPPEPDPFEPFHTAEAISRWGIDYVVLTSVDRDDLVDGGSNHFATTVELIKAAKPEMLVECLVSDFRGSFASVDRLATSGLDVYAHNIETVRRLQPYVRDKRAGYDQSLSVLDRAKVAGKKAGVYTKTSLMLGLGETEEEIVETMRDLREAGVDVLTLGQYLRPTDHHLAVVEYVTPAKFDQYAKMGEALGFSYVASGPMVRSSYKAGEFFIENMIRRGRQEEE 1490
            P+VG  MP+ RP WFRVPAP  +  ++Y E+KSSL +LNLHTVCEEAQCPNIGECWNGGTGTIMLLGDTCTRGC FCAV T  KPP PDPFEPF TAEA+++WG+DY+VLTSVDRDD+ DGG++HF TTVEL+KA KP +LVECLVSDF+G   SV+ LA SGLDVYAHN+ETVRRLQ +VRD RAGYDQSLS L  AK A  K G+YTKTS+MLGLGET+EE+++TM+DLRE  VDV+T GQYLRPT++HL+VVEYVTP KFD + K+GE +GF YVASGPMVRSSYKAGEF++++MI + R E+E
Sbjct:   90 PKVGAEMPKGRPSWFRVPAPSQQEKSRYSEVKSSLADLNLHTVCEEAQCPNIGECWNGGTGTIMLLGDTCTRGCMFCAVNTDSKPPPPDPFEPFKTAEAVTQWGVDYIVLTSVDRDDIPDGGASHFGTTVELLKAKKPSLLVECLVSDFQGDLNSVETLACSGLDVYAHNVETVRRLQKFVRDPRAGYDQSLSTLKHAKEA--KPGLYTKTSIMLGLGETDEEVIQTMKDLREIDVDVVTFGQYLRPTENHLSVVEYVTPEKFDHFRKVGEEMGFKYVASGPMVRSSYKAGEFYLKHMISKERAEKE 394
[Close]
BLAST of mRNA_P-littoralis_Contig805.13.1 vs. uniprot
Match: A0A7S2UUF0_9STRA (Lipoyl synthase, mitochondrial n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UUF0_9STRA)

HSP 1 Score: 460 bits (1184), Expect = 1.690e-151
Identity = 224/305 (73.44%), Postives = 254/305 (83.28%), Query Frame = 3 
Query:  573 PRVGGAMPEQRPGWFRVPAPGGKHTKYEELKSSLKELNLHTVCEEAQCPNIGECWNGGTGTIMLLGDTCTRGCKFCAVKTSPKPPEPDPFEPFHTAEAISRWGIDYVVLTSVDRDDLVDGGSNHFATTVELIKAAKPEMLVECLVSDFRGSFASVDRLATSGLDVYAHNIETVRRLQPYVRDKRAGYDQSLSVLDRAKVAGKKAG--VYTKTSLMLGLGETEEEIVETMRDLREAGVDVLTLGQYLRPTDHHLAVVEYVTPAKFDQYAKMGEALGFSYVASGPMVRSSYKAGEFFIENMIRRGRQ 1481
            PRVGG MP QRP WFRVPAPG  HT + +L+ SLK+L L+TVCEEAQCPNIGECWNGGTGTIMLLGDTCTRGCKFCAV TSP P    P EPFHTAEA+++WGI YVVLTSVDRDDL DGG+ HFA TVE +K  +P +LVECLVSDF G  +SV+ LA SGLDVYAHN+ETVRRLQ +VRDKRA YDQSL VL  AK   +K G  +YTKTSLMLGLGETEEE+++ MRDLR A VDV+T GQYLRPT+HHLAVVEYV P KFD Y ++GE +GF YVASGPMVRSSYKAGEFF+E+MI+ GR+
Sbjct:   78 PRVGGDMP-QRPNWFRVPAPGYDHTHFNKLQQSLKDLKLNTVCEEAQCPNIGECWNGGTGTIMLLGDTCTRGCKFCAVSTSPTPXXXXPQEPFHTAEAVAQWGITYVVLTSVDRDDLPDGGAGHFAQTVEFLKLRQPGILVECLVSDFAGDLSSVETLALSGLDVYAHNVETVRRLQGFVRDKRAEYDQSLKVLKHAKQVAQKDGRDLYTKTSLMLGLGETEEEVIQCMRDLRAADVDVVTFGQYLRPTEHHLAVVEYVHPDKFDNYRRIGEEMGFKYVASGPMVRSSYKAGEFFMEHMIKTGRK 381
[Close]
BLAST of mRNA_P-littoralis_Contig805.13.1 vs. uniprot
Match: A0A7S3V5A7_9STRA (Lipoyl synthase, mitochondrial n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3V5A7_9STRA)

HSP 1 Score: 454 bits (1168), Expect = 1.030e-148
Identity = 218/305 (71.48%), Postives = 251/305 (82.30%), Query Frame = 3 
Query:  573 PRVGGAMPEQRPGWFRVPAPG-GKHTKYEELKSSLKELNLHTVCEEAQCPNIGECWNGGTGTIMLLGDTCTRGCKFCAVKTSPKPPEPDPFEPFHTAEAISRWGIDYVVLTSVDRDDLVDGGSNHFATTVELIKAAKPEMLVECLVSDFRGSFASVDRLATSGLDVYAHNIETVRRLQPYVRDKRAGYDQSLSVLDRAKVAGKKAGVYTKTSLMLGLGETEEEIVETMRDLREAGVDVLTLGQYLRPTDHHLAVVEYVTPAKFDQYAKMGEALGFSYVASGPMVRSSYKAGEFFIENMIRRGRQE 1484
            P+VG  MP  RP WFRVPAP   + ++Y E+K SLKEL+L TVCEEAQCPNIGECWNGGTGTIMLLGDTCTRGC FCAV TS  P  PDPFEPF TA+A+SRWG+DY+VLTSVDRDD+ DGGS HFATTVELIK  KPEMLVECLVSDFRG+  SV  LA  G+DVYAHNIETV RLQ +VRD RAGY QS+S L+ AK       +YTKTS+MLGLGET+EE+++TM+DLR   VDV+T GQYLRPTD+HL+VV+YVTP KFD+Y  M E +GF Y ASGPMVRSSYKAGEFF+ENMI+R R++
Sbjct:   96 PKVGAEMPNGRPSWFRVPAPSQSQKSRYAEVKDSLKELSLATVCEEAQCPNIGECWNGGTGTIMLLGDTCTRGCMFCAVDTSQAPSPPDPFEPFKTADAVSRWGVDYIVLTSVDRDDIPDGGSQHFATTVELIKHQKPEMLVECLVSDFRGNLDSVSTLAACGMDVYAHNIETVERLQKFVRDPRAGYKQSMSTLEHAKEVN--PDLYTKTSIMLGLGETDEEVIQTMKDLRAIDVDVVTFGQYLRPTDNHLSVVDYVTPEKFDEYRVMAEDMGFKYCASGPMVRSSYKAGEFFLENMIKRERKD 398
[Close]
BLAST of mRNA_P-littoralis_Contig805.13.1 vs. uniprot
Match: A0A448Z673_9STRA (Lipoyl synthase, mitochondrial n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z673_9STRA)

HSP 1 Score: 454 bits (1168), Expect = 3.940e-148
Identity = 213/308 (69.16%), Postives = 261/308 (84.74%), Query Frame = 3 
Query:  573 PRVGGAMPEQRPGWFRVPAPGG-KHTKYEELKSSLKELNLHTVCEEAQCPNIGECWNGGTGTIMLLGDTCTRGCKFCAVKTSPKPPEPDPFEPFHTAEAISRWGIDYVVLTSVDRDDLVDGGSNHFATTVELIKAAKPEMLVECLVSDFRGSFASVDRLATSGLDVYAHNIETVRRLQPYVRDKRAGYDQSLSVLDRAKVAGKKAGVYTKTSLMLGLGETEEEIVETMRDLREAGVDVLTLGQYLRPTDHHLAVVEYVTPAKFDQYAKMGEALGFSYVASGPMVRSSYKAGEFFIENMIRRGRQEEEN 1493
            P+VG  MP+ RP WFRVPAP   + ++Y E+KSSL++L+L+TVCEEAQCPN+GECW+GGTGTIMLLGDTCTRGC FCAVKT  KPP PDPFEPF TA+A+++WG+DY+VLTSVDRDD+ DGG+ HFA TVEL+K  KPE+LVECLVSDF+G+  SV+ LA SGLDVYAHN+ETV RLQ +VRD RAGY QSLS L+ AK A  K G+YTKTS+MLGLGET+EE+++TM+DLRE  VDV+T GQYLRPT++HLAVVEYV P  FD Y ++GE +GF YVASGP+VRSSYKAGEF++E+MI+  R  ++N
Sbjct:  131 PKVGAEMPQGRPSWFRVPAPSLLEESRYTEVKSSLEDLSLNTVCEEAQCPNVGECWSGGTGTIMLLGDTCTRGCMFCAVKTDTKPPPPDPFEPFKTADAVAKWGVDYIVLTSVDRDDIDDGGAQHFAHTVELLKYKKPELLVECLVSDFQGNLTSVETLAVSGLDVYAHNVETVERLQKFVRDPRAGYQQSLSTLEHAKKA--KPGLYTKTSIMLGLGETKEEVLQTMKDLREIDVDVVTFGQYLRPTENHLAVVEYVKPEVFDYYREVGEEMGFKYVASGPLVRSSYKAGEFYLEHMIKTERSAQQN 436
[Close]
BLAST of mRNA_P-littoralis_Contig805.13.1 vs. uniprot
Match: A0A0G4FFX4_9ALVE (Lipoyl synthase, mitochondrial n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4FFX4_9ALVE)

HSP 1 Score: 452 bits (1163), Expect = 6.850e-148
Identity = 219/329 (66.57%), Postives = 264/329 (80.24%), Query Frame = 3 
Query:  522 TVDGDAATLSSYPGPM-VPRVGGAMPEQRPGWFRVPAPGGKHTKYEELKSSLKELNLHTVCEEAQCPNIGECWNGGTGTIMLLGDTCTRGCKFCAVKTSPKPPEPDPFEPFHTAEAISRWGIDYVVLTSVDRDDLVDGGSNHFATTVELIKAAKPEMLVECLVSDFRGSFASVDRLATSGLDVYAHNIETVRRLQPYVRDKRAGYDQSLSVLDRAKVAGKKAGVYTKTSLMLGLGETEEEIVETMRDLREAGVDVLTLGQYLRPTDHHLAVVEYVTPAKFDQYAKMGEALGFSYVASGPMVRSSYKAGEFFIENMIRRGRQEEENIVSK 1505
            T+D  +++ ++   P+ VPRVG  MP QRP WFRVPAPGG  TK+ EL+S L++LNLHTVCEEAQCPNIGECWNGGT TIMLLGDTCTRGC+FCA+KT  KPP  DP EPF+TA  I+RWG+DY+V+TSVDRDD+ DGG++HFA TVE +KA KPE+LVECLVSDF+G+  +V RL+ SGLDVYAHN+ETV RLQ +VRD+RA Y QS+ VL  AK A     VYTKTSLMLGLGETEEE++  M DLR    DVLTLGQYLRPTDHHLAVVEYVTP +F +Y  +G A+GF Y+ASGP++RSSYKAGEFF+++MI R R     +V +
Sbjct:   72 TLDISSSSPTTSDAPLRVPRVGADMPAQRPDWFRVPAPGGDKTKFRELQSGLRDLNLHTVCEEAQCPNIGECWNGGTATIMLLGDTCTRGCRFCAIKTDSKPPPADPEEPFNTACEIARWGVDYIVMTSVDRDDMEDGGADHFAKTVEYLKAIKPEVLVECLVSDFQGNKPAVSRLSRSGLDVYAHNVETVERLQRHVRDRRANYKQSMDVLAYAKEAN--PDVYTKTSLMLGLGETEEEVIRCMEDLRSIDCDVLTLGQYLRPTDHHLAVVEYVTPEQFKKYEDVGMAMGFKYMASGPLIRSSYKAGEFFMKSMIARERGLSSGLVGQ 398
[Close]
BLAST of mRNA_P-littoralis_Contig805.13.1 vs. uniprot
Match: B8BQ31_THAPS (Lipoyl synthase (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BQ31_THAPS)

HSP 1 Score: 447 bits (1151), Expect = 1.180e-147
Identity = 211/305 (69.18%), Postives = 254/305 (83.28%), Query Frame = 3 
Query:  573 PRVGGAMPEQRPGWFRVPAPGGKH-TKYEELKSSLKELNLHTVCEEAQCPNIGECWNGGTGTIMLLGDTCTRGCKFCAVKTSPKPPEPDPFEPFHTAEAISRWGIDYVVLTSVDRDDLVDGGSNHFATTVELIKAAKPEMLVECLVSDFRGSFASVDRLATSGLDVYAHNIETVRRLQPYVRDKRAGYDQSLSVLDRAKVAGKKAGVYTKTSLMLGLGETEEEIVETMRDLREAGVDVLTLGQYLRPTDHHLAVVEYVTPAKFDQYAKMGEALGFSYVASGPMVRSSYKAGEFFIENMIRRGRQE 1484
            P+VG  MP+ RP WF VPAP     ++Y+++K SL  L+L+TVCEEAQCPNIGECWNGGTGTIMLLGDTCTRGC FCAVKT  KPPEPDPFEPF TAEA+++WG+DY+VLTSVDRDD+ DGG+ HFATTVEL+K A P +LVECLVSDF+G   SV  LATSGLDVYAHN+ETV RLQ YVRD RAGY QS++ L  AK A  +  +YTKTSLMLGLGET++E+++TM+DLR   VDV+T GQYLRPT++HL+VVEYVTP KFD + ++GE LGF YVASGP+VRSSYKAGEF++ +MI + R+E
Sbjct:    4 PKVGAEMPKGRPSWFHVPAPSSSEASRYQQVKESLSTLSLNTVCEEAQCPNIGECWNGGTGTIMLLGDTCTRGCMFCAVKTDQKPPEPDPFEPFKTAEAVTKWGVDYIVLTSVDRDDIPDGGAQHFATTVELLKQANPSLLVECLVSDFQGDSKSVATLATSGLDVYAHNVETVERLQKYVRDARAGYWQSINTLRDAKRA--QPDLYTKTSLMLGLGETDDEVIQTMKDLRSVDVDVVTFGQYLRPTENHLSVVEYVTPEKFDHFREIGEELGFKYVASGPLVRSSYKAGEFYLTHMINKEREE 306
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig805.13.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KCS3_9PHAE1.790e-21681.17Lipoyl synthase, mitochondrial n=2 Tax=Ectocarpus ... [more]
A0A835ZC82_9STRA6.720e-16275.96Lipoyl synthase, mitochondrial n=1 Tax=Tribonema m... [more]
W7T3L4_9STRA5.880e-16076.64Lipoyl synthase, mitochondrial n=2 Tax=Monodopsida... [more]
A0A0G4EX03_VITBC6.160e-15671.06Lipoyl synthase, mitochondrial n=2 Tax=Vitrella br... [more]
A0A7S4VVM7_9STRA1.240e-15471.99Lipoyl synthase, mitochondrial n=2 Tax=Ditylum bri... [more]
A0A7S2UUF0_9STRA1.690e-15173.44Lipoyl synthase, mitochondrial n=1 Tax=Fibrocapsa ... [more]
A0A7S3V5A7_9STRA1.030e-14871.48Lipoyl synthase, mitochondrial n=1 Tax=Chaetoceros... [more]
A0A448Z673_9STRA3.940e-14869.16Lipoyl synthase, mitochondrial n=1 Tax=Pseudo-nitz... [more]
A0A0G4FFX4_9ALVE6.850e-14866.57Lipoyl synthase, mitochondrial n=1 Tax=Chromera ve... [more]
B8BQ31_THAPS1.180e-14769.18Lipoyl synthase (Fragment) n=1 Tax=Thalassiosira p... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig805contigP-littoralis_Contig805:35932..50671 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FSB7
Preferred namelipA
PFAMsLIAS_N,Radical_SAM
Model size2733
Max annot lvl2759|Eukaryota
KEGG rclassRC01978
KEGG koko:K03644
KEGG ReactionR07767,R07768
KEGG Pathwayko00785,ko01100,map00785,map01100
Hectar predicted targeting categorysignal peptide
Exons7
Evalue2.55e-213
EggNOG OGsCOG0320@1|root,KOG2672@2759|Eukaryota
Ec32 ortholog descriptionElongator protein 3/MiaB/NifB
Ec32 orthologEc-20_004920.1
EC2.8.1.8
Descriptionlipoate synthase activity
Cds size1155
COG categoryH
BRITEko00000,ko00001,ko01000
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig805.13.1prot_P-littoralis_Contig805.13.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig805 36324..48377 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791652.9277163-UTR-P-littoralis_Contig805:35931..363231680791652.9277163-UTR-P-littoralis_Contig805:35931..36323Pylaiella littoralis U1_48UTRP-littoralis_Contig805 35932..36323 +
1680791653.010262-UTR-P-littoralis_Contig805:48377..493161680791653.010262-UTR-P-littoralis_Contig805:48377..49316Pylaiella littoralis U1_48UTRP-littoralis_Contig805 48378..49316 +
1680791653.0234265-UTR-P-littoralis_Contig805:49995..501691680791653.0234265-UTR-P-littoralis_Contig805:49995..50169Pylaiella littoralis U1_48UTRP-littoralis_Contig805 49996..50169 +
1680791653.037994-UTR-P-littoralis_Contig805:50598..506711680791653.037994-UTR-P-littoralis_Contig805:50598..50671Pylaiella littoralis U1_48UTRP-littoralis_Contig805 50599..50671 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791652.9415374-CDS-P-littoralis_Contig805:36323..365811680791652.9415374-CDS-P-littoralis_Contig805:36323..36581Pylaiella littoralis U1_48CDSP-littoralis_Contig805 36324..36581 +
1680791652.9577267-CDS-P-littoralis_Contig805:45242..454551680791652.9577267-CDS-P-littoralis_Contig805:45242..45455Pylaiella littoralis U1_48CDSP-littoralis_Contig805 45243..45455 +
1680791652.9724839-CDS-P-littoralis_Contig805:46072..462491680791652.9724839-CDS-P-littoralis_Contig805:46072..46249Pylaiella littoralis U1_48CDSP-littoralis_Contig805 46073..46249 +
1680791652.9823449-CDS-P-littoralis_Contig805:47191..473981680791652.9823449-CDS-P-littoralis_Contig805:47191..47398Pylaiella littoralis U1_48CDSP-littoralis_Contig805 47192..47398 +
1680791652.9993308-CDS-P-littoralis_Contig805:48077..483771680791652.9993308-CDS-P-littoralis_Contig805:48077..48377Pylaiella littoralis U1_48CDSP-littoralis_Contig805 48078..48377 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig805.13.1

>prot_P-littoralis_Contig805.13.1 ID=prot_P-littoralis_Contig805.13.1|Name=mRNA_P-littoralis_Contig805.13.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=385bp
MRSALASSVAAWAVTCDAFYIPPSVAMPPKSSSGVSTEATTPTTVDGDAA
TLSSYPGPMVPRVGGAMPEQRPGWFRVPAPGGKHTKYEELKSSLKELNLH
TVCEEAQCPNIGECWNGGTGTIMLLGDTCTRGCKFCAVKTSPKPPEPDPF
EPFHTAEAISRWGIDYVVLTSVDRDDLVDGGSNHFATTVELIKAAKPEML
VECLVSDFRGSFASVDRLATSGLDVYAHNIETVRRLQPYVRDKRAGYDQS
LSVLDRAKVAGKKAGVYTKTSLMLGLGETEEEIVETMRDLREAGVDVLTL
GQYLRPTDHHLAVVEYVTPAKFDQYAKMGEALGFSYVASGPMVRSSYKAG
EFFIENMIRRGRQEEENIVSKAMAAASALDPNDR*
back to top

mRNA from alignment at P-littoralis_Contig805:35932..50671+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig805.13.1 ID=mRNA_P-littoralis_Contig805.13.1|Name=mRNA_P-littoralis_Contig805.13.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=14740bp|location=Sequence derived from alignment at P-littoralis_Contig805:35932..50671+ (Pylaiella littoralis U1_48)
CACGGACGTCCAATCGGGGCCGTGGTGGCGAGACAGACACGAACGCGGCT
GCGCCACGTTCGTGGTCCGCAAGTCAGAATGTTCTTACTTCGCAGGGAGT
GTCACTGAGAACCAATCACGAGTCGAGCGTGCACGTTCTTGTTTGCAAGT
GCGGCGTGCAAATAGGGGTAGCCGTGCATCGTTACATATCAGCATTTACG
GAGCTCTTGACAAGGGCTGGGCGCTATGCGCGCGGGTGCGAGGCATGGCA
GGGAGTAGGGAGGTAAACAAAGGGGCAAAGAACATCTCAAACACGCACGA
GTCTGGCTGAACGCGAGTGCGTGTCAGAATCATAGCACGGGTTGGTGTTA
CCTTCATTGGGTGGGAAGGGGGCAAGCTGCACAGTCCTCGGCATGCGGTC
TGCACTTGCCTCATCCGTCGCCGCTTGGGCTGTAACATGCGACGCCTTCT
ACATACCGCCCAGTGTGGCGATGCCCCCAAAGAGCAGCAGTGGGGTTAGC
ACGGAGGCCACCACTCCAACAACAGTAGATGGCGATGCTGCTACACTGAG
CAGTTACCCTGGACCTATGGTACCGAGGGTGGGCGGGGCGATGCCGGAGC
AGCGGCCGGGATGGTTCCGGGTTCCTGCTCCAGGTGGAAAACACACGAAG
GCAAGGTACCTTCACAACTACAGACATAAGTAGGGTACAATATCACACTG
AGTACAATATGTATGATATGATACAAATGTTGTCATCCCATATTCTCTGG
CACACTAGTCTGCACCCTGCGGTCCAAACTACAGGCTAGGCCCATCGACG
GGGTCACACAGGAGGGAGGTCAACACAGGAGGAGTTACCTCCACCTTCCT
TCTGCGGTACACCGGTCGCCCCGGTGGACTAGTGGTCCCTCGTTAACCAC
TAGATGCAGAGGAACGGGGGTTCGATTCCCGGTGAATGTGTTCCTTTGCT
ACTTTGAAAGCGGCTATGCTGTTAGTAAAATCAGATTCGGCTTCGCCGAC
GAGGGTAGGGACCGCGGACCCCTGCTCGCGAGAAAAAATCTCACGCATGT
ACCGCAGAAGGAAGGTGGGGGTAACTCCTCCTGTGTTGACCTTCCTCCTG
TGTGACCCCGTCGATGGGCCTAGCCTGTAGTTTGCAGACTAGTGTGCCAG
AGAACATGGGATGACAACACATGCGTGAGATTTTTTCTCGCGAGCAGGGA
TCCGCGGTCCCTACGAACCCTCGTCAGCGAACAGCGAAGCCGAATCTGGT
TTTACTAAAAGCATATCCGCTATCAAAGTAGCAAAGGAAGATATTCACCG
GGAATCGAACCCCCGTTCCTCTGCATCTAGTGGTTAACGAGGGGACCACT
ACCGTATTCTACACAAGATACCACACCCCGTGTTAAGCTTTTTGCATTCC
GTATAGCTCCACAACCAGGAGGGTGCCACTGCCGAAAAGGGTGGTTTTGG
AAAGATCTCGTCGAGAGCTTTCGTATGACGGGTTGTTTGGTGTTCGCACC
CTCCTGGTTGTGGAGCAATACGGAATGCAAAAAACCTAACACGGGGTGTG
GTATCTTGTGTAGAATACGGTAGTCCACCGGGGCGCGTGTGTGTGTGTGT
GTGTGTGTTGCCATCCCTTTCATTGGACGCCACTCTACACCTTTCGGGTA
GGTAGACGCTCCAACCGGGGTCACACAGGGGGAAGTCAACACAGGATTTT
TTTTTTTTTCTCTACTTCCCTCTGCGGTGCTTGCCTTTTTGGTTGAGCTT
TTATCCCGAGGAAGGGGACAGCAATCCCTTTCCCTCGTCGATGGTACGAT
CGAATTTTGATTACTTACGAATTGATCGCTTTCCACTTTCACGCGCAATG
TGAGAGAAAGCCCCAGATCGTGTTACTGCACTGGGATTCGAACCCACGCG
TGTTTGTCAGAACGTTGCGTGTATTACCAACGGAACCACCGGGGCGACCG
GTCATACAAGAATTTGAAGTATTATCATCCTCTCGCCACATATGGTCCAT
GCAGAGGAATTTTCCCAAAGGGGGTACCCGTTTTTTCTCCTTCATTTTTG
AGAGTTGAAAACTGAAACCAAGCAGATTGATTGACACTGCTGTGATAGCA
CTAACCCTTCCCATCCGTTTCCTCACTGCATCAGTACGTCCCCCCCTGTT
TGTTGAGTACCGTTGACTGAGCTATCACGTCCTTCGAAGTTTTCTTTTTG
TGTTCCCTGTTTCTGCCCTTCTGCCTTTTTGCCCCCTGCACGCCTGCGTA
CTTGCGCTGCCTGAAACCGTACTGGGCCGGTGAAGAGAGTAGCACGCCTG
ATGTCCATTTTATCGACACCTTAGCAACTGGATTCGGTGTCTTTTTGTCT
TTTTTGTCACTCCTCTGTGACTTTTTATTTTATTTTTGACTTTTTATTTC
TGTTATTTCATTTTGTGACTTGGCTCTGGACCAGGCTTCCTTTTCTTGTT
TTCTTGTATCGTGTTCTACTTTTGTACAGCGTTGTGTGATTTCTCGGGGT
CCGTTTTTGTTTTTGCCGGAGTCTCCTTGTCGTGCCTTTATTTGGTGGAC
TGAGGGGATCTCCCGAGTACTACATACCTCTTTTGGGGCAAGCAGCCTGT
GACCACGGAAATCGTACCTGATCGGGGGAGTACGGACATTAGAAGGTACT
TAGGAGAGATCGGAATGGTTTCTAATGTGAAGACAACAACAACAACAACA
AGCACACCGTAAAGACAATGAATAGACGAACACGGGCCTTGAGTCAACAA
AGAATTTCATTAACAATGGCCACGGGTCGATACTCTAATCAAGTAAGTGT
TATTTTGGACGTGAAATTGGAACGATACAGCTCAACTTCTATTTCACTTT
GTGAGAGTAAACAAAATCGATTTTTGTAAAACTTTTGAGTGATCTGAACT
CGCTGTGAAGAGTTCGAAATCGTCGGAAAAAAATAGTTGCCAAAAAGTAC
TCAAGGGACGAGATAGATATACGAAGAATAAGCATGTAACACTGCTGTGA
AAGATGATCGGTTTGTTACTCAAGGCACCAACAGAAAGACGACCACACAC
ACGCACCGTCATGATTTGTTCACATTCATGTTACAGCGGCACTTCTGTGT
AGCTCAGCTGAACAGCAGTACGACAGTGGCTGTGGTTTTCGAGATTTTTT
TTTTTCAAAGGTACACCTACCCGAAAGGTGTAGAGTGGCGTCCAATTAAA
GGGATGACAACACACAACACACACAGGAGCAGTCCGTTGTGGGTGGTGAT
ATTTCCGGACTCATGCTGACATCTCAGGGTGGAGAGATTTTTCTTGAAGC
AGTACTCGACGCAACGGCTGGGAATGCTTTCAAGACATGCATCCCATCAT
GAGGCCGCTAGTGATGGATATCGTTCTGTTTTGAGAACGATACGAGTTTA
GTTCGCGGAGCGGACGATAATCGATCCGGTACGATAATAACGGCTTGCGC
TTGCGCAGCGAGCCGTGTCCGCTCGCTGTGCGAGCCCCAAGAGGCCCGGC
TGGCGAGGGGGCCCCGCTGGAGGCGCCGCCGGAGGCCAAAAAAATTGTGC
ATGTTTGGTTCATTTTCCATCACAATTGTCTTAGGCTGAATCTTATGGCA
CACCGATTTTGAGACAGGTTTCCAAATGTTTGGTTCATTTTCCATCACAA
TTGTCTTAGGCTGAATCTTATGGCACACCGATTTTGAGACAGGTTTCCAA
ATCTCGTTGGGCCAAAATCGGTGGGCCCACAGGCTGACTGTGTGTCTTAT
GGGACACACCGTTATTGATAAAAATCAAGCGTGTCGATTTCAGCCCTGGT
TTTCAGCGTCCTCCAGAAGCGTTTTGCATCAGGGACATGATTTAACAGAG
AGAGAACAGGCCGCACCGCGCCCCGCACACCACATAAATGTTGGTCGCTG
ACACTGACACGGAGAGAACACCTATTATCCTCTTGTTGTTTTCAGCGTCC
TCCCTCACGGGTCGGGTGTGGGGTTTGGTTGCGGTTCGAGTTTGGTGCTG
TGCGCTTGTCACGAATGCAATCAACAACAACTGAACAAAGAATAAAGGGC
AGACGCCAGAAAGCGGTATACCGCCATGGTTCCGCGCCACTAAGCGGTAC
ACCAAAATACACCACGGCGTTTGACCAGCATCCGCGTCGCTGATTGGCCG
ACTAAGCCCTGTACCGTCTGCTGGCATAAGAACGTGGCGGTATACCGTTC
CTTGGCTTCTCAGGTCGAATTGTACCGTTTTCTGGCATGGGGTGTACCGA
CTTCTGGCGGACCACAGCACCCCCAGCGGAATATTTCGCAGACCGTTCGT
GCCGAAAAGAGTTTGGCAGAAATTTCTAGAAGGGACGAGAATTTTCATTT
CACAACCAACATAGCCACGTCACGTCTCCGTCGTGTCACGGACGTATGCA
CGTTGCACGCATTGCACGGCTATTATCGTGCACGGATAGCACGGCTCTCT
CGATCTCTCCATGCTGCGGCTCTCGCGTGTTGGTCATTCGGGTATTTGAA
GTTGGCCCTTTGAAGTATGTAGGGAAATGTGGGACACGAGAGGGTGACAG
CGGGGTGGGTATAAAGCTCGTACTAGTTGAGGGGTCGCGATGGCGATTGT
GGTGCGTGCAGTCACCCCGCCAGTGTTGGAGGTGTGCGGTCACAGCGTCG
CAGCTTTGATGCCGGCAGGACTGTCGGCTGTCTTTCGAAGCAGCATGGAG
AGATCGCGAGAGCCGCAGCATGGAGAGATCGAGAGAGCCGTGCTATCCGT
GCACGATAATAGCCGTGCAATGCGTGCAACGTGCATACGTCCGTGACACG
ACGGAGACGTGCGTGACGTGGCTATATGTTGGTTGTGAAATGAAAATTCT
CGTCCCTTCTAGAATTTCTCCCAAACTCTTTTCGGCACGAACGGTCTGCG
AAATATTCCGCTGGGGGTGCTGTGGTCCCGGGTGACCGGCGCCAGAAGTC
GGTACACCCCATGCCAGAAAACGGTACAATTCGACCTGAGAAGCCAAGGA
ACGGTATACCGCCACGTTCTTATGCCAGCAGACGGTACAGGGCTTAGTCA
GCCAATCAGCGACGCGGATGCTGGTCAAACGCCGTGGTGTATTTTGGTGT
ACCGCTTGGTGGCGCGGAACCATGGCGGTATACCGCTTTCTGGCGTCTGC
CCAAGAACAAATACAGCAGCAGTAGCTCGGGGATCGATGCGGTGCGACCC
GCTATGTTGGTAGAATGGTCAAAACTCAAATCTCGTGGGCCAGATCTCGT
GCGTGGAGACACACGAGATTTGGGCCCAAAATCGGTGGGACTGGCTCCCC
GATTTTCGTTCACAGGTTTTCAAACCTCGTTTTGCCCAAAATCTGTATCC
ATAAAGTGGACCAAATTTTTTTCAACGAGGTTTGAAAACCTGTGGCTCAA
AACCGGTGTGCCATAAGATTCAGCCTTCGGCTGTTTCTTACGGTCGACGT
TATTTTGGCCTGGCGTATTGACCCCCCTACAAGAATCCAACCAGATTACC
CCCCTACCCCCCCGCACCCGCAAACAGCCCTGTTGCACATATCATGCGAC
AGCACCAACCAGAACTCGACCCCTAGGTCACAGATGCCGATCAAACCTGA
TGGAGCGTGTGCTCCTATGTTCTCAAGTTGGCCACAGGAAGTTTGGTGGC
AGTGGGTTCGGGCTGTAGCGAGATTTTGGCGGCGGTGTGTGTGGAAGATG
GAAAAACAGATGCAACTAAATAACGGTCTTCGCTCCTGTTTTCCGGCCAA
AAAACAGGCTCGGACAGCGTTTTTTTTTCCACCGGATTTTCCTACCTCAA
CCCACTCCGCCGCCGAAACCTCGCCACAGCCAAAGCCCATACCCACCAAA
TTTCCTGTGGCCAACCTGAGAACACTAGAGCGTACCGTCCAACAGTTGTA
GTCTCGATTGGTGTCCCAGGGGTCGAGTTCTGCTTGGTGCTGTCTCCTGT
TGTGCTCAAAAAGTATATTTTTCAACCGTTTGGGCTCTCTGTTGTTGGGG
GGGGGGGGGTACCTCAGGAGAAAAAACGCATGACCAAATAGCGGAGCCGT
AAGAAACGGTCTTAAAATGGAGTTGTATAACCAGCCTGCTCATTGTGCAG
ATGCTGCTGAACAGTGAGAGTAGGAGAAAATACGACATTCAAAATTATGA
TTGAAAGCCTCAACAGCAAAAAATTAGAGTTGCGACCCGTGTGTTCCCCG
GGTCTTTGGGCAACAACCCGGATGATTTTGAGAGCAATGGAGCAATGCCC
CAACATGTATGCGTGTCCGCGGGTACCCGGATGCCGGGTGCTCGACCCGC
AACCCGAAAACCCGCATTTTTTATGTCTCGTAAACTGCTGTTCTTCGGAA
GTATTATACCTGGTATGTAGTAGGATAGTAGGTTTGGCACATCAGTATGC
AGCGCGTGGGGAGCAGCGTTCCAGCCAGCTGTAGCGTTGTTTCTTGTTTC
GACCCCGCAACGTTTGAACAGATTTTGGGCAAAGCGCAACACCGCCGGCT
ACTTCTACTACTACTGTGTCTGCTTGCCGCAACGAAAATAATTGGGCGGC
ATACCTTCTCTCGCCTAAGGCGAAAACAATTGTTGGGGTACATTTTCATG
CCGAAGGTGCAGAAAATTCACTATTCTTTGAAGTCGCACCTCGTTACGTC
GTTCGAAGTACTTCGAAGTATTTTGAGTGTTTTTTAATATGATTTTGTGG
AAAAAAAATCAGATGTCCGAAAAAAATGGCCTCCGGCGGTACTACTCCGG
AAGGCCCCTACGCGGGGAGCGTGCTTTTGCCGCAACGTAGCACCTGCAAG
ATAGGCCTGCGGCCTATCTGAATCGCTGGTGGGGACCCAAAGTTTCTTCG
CCCACGCATATGATAGCCCCCAAATTTAGCTTTCCACTTGCTGCGAGGTA
GACCTTCCCGTCATCATCCACCATCTCGACGCTTGCCGATGGCGCCGCCG
TCGTCGATGGCACACCCCTCCCGGTGCTATATGTTGGGTGTGCTGTCTAG
CTGTGGTAGTGTGTGTTGCGTTCTGCGCGCCGCGGTGCTGTGCTGGTCTG
CTCTGTGCTCTGTGCTGCTGTTCTGTTCTATGCTGTGGGAGTGCGAGAGG
TGTTCCTGTCCCCCCCGGGGTCATTCCGCAAGTATTATCGCATCGTATCG
TATCATATCGTTTTATCGTTTATCGTTATCGCTATCGTAATACCGAATGT
TTTTCGGTACGATGACGATACGATCCGTACGGTACGATATATCGTTTGAA
ACGATAAGACATCCATCACTAGAGGCCGCCCTTCAGACAGCGCTATCAAC
AGGTCCGAATTCCTGACGCTATGATACCCCTCAAACTCGATCAGCGATGC
AAGCCCGAGATCTGCAGTAGACGTGTCCAAAATCCAGCAGGATTGGCAAA
GGGGAATGGCACGTGATGGAGAAAACACTGAACTACGAACAGCTACAAGA
AGTTCCCCAGATTCAACAAGGATTCACCTAGTTGTTTGTTGTTGCTGTTG
ATTCTCACATTAGCTCACCGCCATCGCAGTCTAGCCCGTGGTCACAAACC
AGGCACATGTCGTGATAGGAGGGAAATGAAAATAACATAAAAGAAATAGA
CGATCGTCACCCAATCAAATCAGATAGGGTACCGTTGGGGTACCATCTGT
GGTGGCCAAAGTACAAAATACAGAAAAAAATAAAACAGAAAAAACAGGCT
CGAAAGAAAGAAAAACAAAATTGGAAAAAGTACAAAAAAAAAAAGAAAAG
ACAAACCTGAACCATGTACTCGCACGTATACCGAACCAGAGCACAAACCC
AGGCAAACCAGGGCGCGTGGTCCAGCACTTTCGATCAAAATACGTAGACT
AAATCAAGACGCAAGACAATAGACAAAGGACAGGGGGGGGGGCACGAAGA
CTGAGGGAAGGTGAACAAACAAACAGGCAGCCAGACAGAGGAAGCAGAGG
AAAAGGGAAAATAAAAGAGACAGAGAGGAAAAGTACACAGAGTGCAGAGC
AAAAAGTCGGGAGGGGGGGGGGAACAAAAAAAAGGCATGCAATCAGTCGC
AAACATGTATGTCTTGCTACGAGGTCTGCCTGTTCGCGCTTGCTCTCCTC
AGTCGCACTCATGCCTCCTGTCTCTGGTACCACCGTACACAGCAGTTGTT
TCTGCCCCACATCTTTGGCAGCAGCTACAACACCGCTCTGTGATTTCCGC
CCTTCAGGTTTTCCGATCCGGCCACCCCGTAGCTTGGCCTCGGGTTGCTT
CTTCTGCCGCGCAACTCCAACCCCACTACCCCGCTGCCCTTTTGGCCTCC
TGTACTTCTCTCGTTTCTCCTCGCCATCCGTTCTCCCTCTTTTGGGCAAG
GCCTGCCCCTCAGCCGCGTCCCTCTCCCTTTTCCGTCGACGTGTCTCTGA
TAAGCCTCCCTCATTCTTGAGCCACTCGTGCGTGAACCGCCGCGCACCCT
CGTCGATCCCGTCGTACCACTCATCCGCTCTCTTGGCACTTACCTCCCAC
CCCTCTTTCTCGTCGATAGCGATGCCGAATGCTTCGAGGTCCTCCTGCAG
TCGCTTCAGCCAGTCAACTTATTGTCCCCCCGAATACCTCGCACCCCCCT
GCAATTTTTCCAAAAGAGCAATTTTCGGGAGTCTCTCGTCTCTCATGCGC
GCAACGAATCCTGCGAAGCACAGTCGCCGCTTGCGCACGGTGGCCTCAAT
GCTCTCGTCGTAACCCGCGGTGATCAGGGCTGTGGCGTAGGAGAGGGGTT
GGTCTGTTCTCTCCCTCTTTTTCCATCCGATGCAGCGAAGGAGGAAGAAG
TGGTGGGCTGACCGAAGTTTGCGGTACTCGGCTGGCTCCAGGTTCCATGT
AACAAACCCGTAGAGTAGGACCTCCACGACTTCGGCTTGGAGTCGTACTC
TGAGTCGAACGGGGGCCCCCGGACAGTCGTACATTGCCTGGCTGTTGCGC
CGGAAGCAGGCGTGAGCTCGCTGCGCTCGGTGTTTTATCTCGCCCTCCAA
TGCTACCGTCCTCACAAACCTTACCCCCGAGATATACAGAGTCTCTCTTC
TGCTTGAAGACCGTCCCGGCTTTGTATGATATACTGACGGTACATTTTTA
ACCCCCCACGTAAACAGCGAAGAACACACGAACGTTGACAGGAGTCAACC
TACGATCCATACACACCCGGCGGGCTGCGCTCGTTCGGGTACTATTGATT
GACCTACGGTGTATCTTAAACCTCTTTTCGGAACTTGACTCTACCAAACC
AAGCCTAACCCAAACTCTTTCTTACCTGCTCGATTGCTTGCTTGACTGTC
ACTCTCTTCAGTACGAAGAGTTGAAATCCTCGCTGAAAGAGCTGAATCTG
CACACTGTGTGCGAGGAGGCCCAGTGTCCCAACATCGGGGAGTGTTGGAA
TGGGGGCACGGGCACGATCATGCTGCTGGGAGACACCTGCACACGTGGCT
GCAAGTTTTGTGCTGTGAAGACGTCGCCAAAGCCGCCGGAGCCGGACCCG
TTCGAGCCGTTCCACACGGCAGAGGTAGGTGTGATGATTGCGTGCACGTA
GGATATGATTTGATACTATTGCCGTTCAAGCGCGTGTCTACCGCTTCTTT
TGATCCCCTCTCCACAAGTATTCCTTGCTCGTTTCGGCTGACATTGTTTT
GTGGTCGTTCTCCTGTTGGTGCGTTGAGTAAATAAAGCACAAGCCACGCA
GCCCGATGCAAGCTCACCACGCCTCCAGCGGCAAGCTGTTTCATGCGCTG
CTCACCATGTGTCTGGCGTTACACGGAGGCGTTCTAGTTCACACCTCACC
CCAACACCGCCGTACTGTGCTACAGGCGACCTCTAGATGAGGTTTCCGCT
ACTGGCTGTGCTGCTTCCGTCGGTCTAGTCATGCGGGTACGGTCGGTGGT
TAGTTGACACGTGAGGGTCTTTCCTTTTTGATATATTTCCAATCTGTCAA
GCACGACATGTTTGCGGGCAAACTCTTCACCCCGGGTGATGCTGAGGTGC
ACAGACCAGACTGCTACCGCCGTGTACTTGTATGCATATATTTTCCACAC
ATGATGTTTCACCAGCACACATTTCTTCAACGGCATGTCTTCTCGTTGTT
TGTGCGACACCACGTATCGTTGGATGGTTGAATCGAGCCAGGCAATCTCG
AGGTGGGGAATCGATTACGTCGTGCTGACGTCGGTAGATCGCGACGACCT
TGTGGACGGCGGGTCCAACCACTTCGCCACGACGGTGGAGCTCATCAAGG
CCGCCAAACCGGAGATGCTCGTCGAGTGCCTGGTCAGCGATTTCAGAGGG
AGCTTCGCTTCCGTCGATGTGAGAGCTAAAATGGTTGTGGTTTTCTGCTG
CGACGCAACCTTCGTCGCGTGAAAAACAGCGCAGCATTCGACGAATCGTG
TGTGATTACGGGGGACTGACCGCTACTTGCTTTGTCGGAGTCCTCTCTCT
GATTCAGCGAATCCGAGCAACATTTGAACTCGCGCAATTTCTTGGTCGTG
TTTTTCTCTTTTTGAACGAAGTCATTCGCCCCGGTGGTTCAGTTGATTTT
CCTCGAAATCTTCTGACACTTACGCTTGACTTCGAATCCCGGTGCAGCAA
CACGGTCTGGGGTTTTTCTCATGTCATGCTTGAGGGTGGAAGGCGATTAA
TTCGTGAGTAAACAAAATTCGAAGTGTCGACGAGGGAAAGGGATGGCTGT
ACCCTTTCTCGCTATAAAAAAATAAGGTAGGTACCGCAGAGGGAAGCGGA
GAAAAAAAAAAAACTCCTGTGTTGACTTCCTACTGTGTGACCCCGGTTGG
AGCGTTAACCTACCCGAAAGGTGTAGAGCGGCGTCCAATTAAAGGGATGA
CAACACACACAGTCTTAGTGGCTATTTTGTGTCCGCTGTCCATCGCTGTA
GAAACCGTCGCGCGTATGACACTAATTGTCGTCCATCGCGCGAAGCTATC
GGCCGAATGCTTGCGCTTCGATTCCGTTTTTGATTCTTGCCGTGATCAAC
AAACTGTATGATATTTTGCCGCGACCTGTCTTCTGCAAGATGGGTGCCCC
GCCGTGGTTGGACTGCCATGTCGCCAGTGTTGAAGCAAAAACTCACAGAG
TAGAGGGCCACTCGACTAGACGTTTGTCGGTGGTAACATGAAAAGTTCTG
CTTCATCGACATTTTTGGCGCTAGGGTCTAAATTTTTAAAATTTAAAATT
TATTTCGAAATTTCAGCGTGTCTTGAGATGTTTTCGCTTTCCTTTGCCCC
GCACCCTCAGCGATTAGCCACGTCCGGCCTCGACGTTTACGCGCACAATA
TCGAGACTGTGAGGCGACTGCAACCCTACGTCCGCGACAAAAGGGCTGGC
TACGACCAATCGTTGTCCGTGCTTGATAGGGCCAAGGTTGCCGGGAAGAA
GGCGGGGGTCTACACAAAAACTTCGCTCATGTTAGGATTGGGAGAGACGG
AGGAGGAGATAGTAGAGGTGAGCTTCGGAGGTGTTGACGGTCAAGTAGTG
GTGGCGTCGTTGCTGTGTTGGTTTGGTCGGTGTGTTTCGTCCTTTTGGTT
GTCCTCGTCAGCACCCCTCTTTTTCTGAAATGGTGTTTTCGTTGTCGCTC
TCTCGGCTCCGCTCAACTCTGGTTTTCCTCCCTCTTCTTGGCCTTGACAC
CCTTAACACCCTTACCCCATGGTGTACATACGGCGGGGGGGTACGTGTGC
CGTTTCCACAAAAGTTGGAAGTAAAAGCTGCCTCTGAAGGGGCCGCTGCT
GAAGAGATACAAACACTGAGATGCGGACGAGTAGAGGGTGAAAACCTCGA
ATATCCGTGTTGCCAACGGCATTTGAAACCCAAGGAACTTGAGACGTCCA
AAGCGTAATCTTAAGAGGCACGGGCAGCTCCTTTCTTCAGAAGCGCAAGA
ACAAATGTTGACGACGCCAAGACCATGTTTATTAGAGACATGACATAGCT
AGACATCATGTCTCATCGCATATTCAACGGGGTCCCGTAGATCAGTATCT
ACTGCCGGGTACACCAAACACGTTATGTGTAGCTGTTGCAGAAGGTGACA
AGCAACGAATCACTTGGTTCGAATTTTTAATCCCCCACCTCTGTGTTTTT
TTGTATTGAAATTTTCTCTCTGTGACGACCCAAAATCTCCGGATAGACCA
TGCGGGATCTCCGAGAGGCCGGAGTGGACGTGCTGACCCTGGGCCAATAT
CTGAGACCCACAGACCACCACTTGGCAGTTGTGGAGTACGTTACACCCGC
AAAGTTCGACCAGTACGCCAAAATGGGTGAAGCGTTAGGCTTCAGTTACG
TTGCGAGCGGGCCAATGGTGCGCTCGTCCTATAAGGCCGGCGAGTTCTTC
ATAGAAAATATGATTCGCCGGGGCCGGCAGGAAGAGGAGAACATCGTGTC
CAAAGCTATGGCAGCAGCTTCGGCGCTTGACCCGAATGACCGCTAGGCTT
GTTTTGTGGTTTAGGCTGTGCTTGTTTAAGCTGCATGTTGGGTGGCGGTG
CGGAGAGTCTGTTGTCAAAGAAGTCAGAGCAGCGTTTTTGGCGGGGGGCC
TAGGATACAACTACAATGTACAACGTTTGTGAAGGCGTCAGGTAGTCCAA
CCCTCACCAACAAAAATACGGCCGATCAGGCACACGCCTTGACGCCGTTT
GCACACCAGTACCCCGAACATCCTCACGGTGATCATCACACAATTTCCTT
ACACGCGTCGTGACAAATCGCAATCGCGAGACCTGCATGGTTTCCGTTCC
CTGCCGAGGGAGCGGAGCACGCACGTTCGGCAAGGTCAATCGAACGGGTA
GTCACACACGGTAAAACCTGAACGCCAAACACGACTTGTACATAGAGGTT
GAGATACAGCAGAAATTTGGGCACTGGTGCATCATAGCGCGGCAGTCGCC
ATGTGTCATACGGGTTTGACTGTTTATGCTCCCCTGTTTATCTGCCACGT
CAACATCATCACGTCAAAAGGTGAACTGAAAACAAAAACAATACGTTTCT
AATGCGCCTCAATCGGCGTACTTTCCACACTACTCTTGGGACTCCGCACA
ACTACCGCACAACTACACCGGCCTTGCTTAACATCGCGCTCAGCCGCGGC
CCGACCGTGCCATTGTACTCCTTTTATGCACCACTATTCTACTGAAAACA
AAACAGCACCTGCTGTCACCCAAAACCCACAAAACAATGCGCTGTCAGTG
TTGAAGCTCAAGTTCGCAACATCAACTTCAACTTGGTTCTTTCTGCCTAC
TGCCCTCCGGCAGATGCCACTGAGTGGTTTTGTCCCGTTTGTTGAAGAAG
TAGAAACGCTTCTCCCTGTTGGAATGTGCCAGTACCCATCCCTCTGGTAG
AATGTAGTCTTCCGGGGTCAGCACCTGCAGGGAAGGCATACATGGATCAC
CACCGGGCATTTGTGCACACGCCGGAAATTTGTACTTCGTATCTGAGATG
AAAGCCTCACCCATCACGGCATTGCATTATACTCGTACACCTATCCAGAC
TGCGAATCTCTTGCCGTAGATACGAGTACAAAGCTGCTGTGTATGGATCG
GGTGATAAAACAAGTTTTGATAAATGATAGCACCCTGCACGTCATGCTGT
CGGAAATGTGAACAAGAACCACAGCGTGCGCCTTTACGACCCGAATCGTT
TCCAAAGAGCTGTCTCGGTACTGCCTTATACGATCCCGTCGGCCAACATT
CGAGACTTGGCATCTCCACAGAGTCAGAAGTCGGCGCCGACTCGGGCAGT
CATGAAAGGTCTTGCTGAGGGTCTTCCGGAAAATGTCGTGGAATTTTGGC
ATCCTCCTCTCTTGTTGACACATGATCGGCCCCCTTAGGGGATCGACCTA
CGGCGACGTACTACAGTCGGAACGAAAACACGCTGAACCACAAAGACACG
TCATGAAACTGACTCTGGAGGTCCGAGCAACAACCCGAGCAACAACCAAT
TACAAATCTATCTCGAGGCCTGGAGCGAGTATTCTTCAAAGAACATCTTG
CGATCAATACCTTCTTTGGCTGCTGCTGCAGCTGCTGCTGCTGCAGCTGC
TGCTGCAGCTGCAGCTGCTGCTGTTGCTGCTGCTGCTGTTCTTCTCTTGG
TCGTTTTCTGGGTCTAGAGCCCTCCGCTTGATCTAATACCACCCCCGCAG
CCGCGCTCACGCTACCTGCCACTCCATTGGTGTGCATGGCTCTCCCGCTT
TGCCCAGCCACCCCTGCCAATCGTTGCTGCTGCTGCTGCTGCCAAAAGCG
TCCGCCATAAGTCAAAGAAAACATCAAACAAAATATACACGACCGAGGTG
CATGTCACGCGCGACGTTGATCGACAGGAGAGTTCGATCCACCAGTCAAT
ATCCCAACGTTTTCACATTAAAGAAATTCGACTTTATCAATTGTCGGCTA
GGGAAAGAGGAGTTCCGAGCTCTTCTCTCGCGAAAACGCTCAATGTACGC
AACGCCTGGGGCAGAAAGGGCGGCGGGGGGCCTCAGGCGAAAAACCTCTT
CGGTGATACCTCGGCTTCACCAGAGTGATTGAGCGATAAGAGACTGGACT
ACGGCGGTAGAGAACAGGCAGGATGAACAATAACAACGACTTAATTTAGT
ACGCGTGTCTGGGTGAAACCACCACGCGTGCTGGCATTGCATGTGCGAAT
CACTTCGTCGCACCCACCTCACTGCCAACCACCGAAGACCTCCCGGTAGC
ACCGGCGGAGGAACCTGAATCTAGCCTCCCCCCTCTCTCC
back to top

Coding sequence (CDS) from alignment at P-littoralis_Contig805:35932..50671+

>mRNA_P-littoralis_Contig805.13.1 ID=mRNA_P-littoralis_Contig805.13.1|Name=mRNA_P-littoralis_Contig805.13.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1155bp|location=Sequence derived from alignment at P-littoralis_Contig805:35932..50671+ (Pylaiella littoralis U1_48)
ATGCGGTCTGCACTTGCCTCATCCGTCGCCGCTTGGGCTGTAACATGCGA
CGCCTTCTACATACCGCCCAGTGTGGCGATGCCCCCAAAGAGCAGCAGTG
GGGTTAGCACGGAGGCCACCACTCCAACAACAGTAGATGGCGATGCTGCT
ACACTGAGCAGTTACCCTGGACCTATGGTACCGAGGGTGGGCGGGGCGAT
GCCGGAGCAGCGGCCGGGATGGTTCCGGGTTCCTGCTCCAGGTGGAAAAC
ACACGAAGTACGAAGAGTTGAAATCCTCGCTGAAAGAGCTGAATCTGCAC
ACTGTGTGCGAGGAGGCCCAGTGTCCCAACATCGGGGAGTGTTGGAATGG
GGGCACGGGCACGATCATGCTGCTGGGAGACACCTGCACACGTGGCTGCA
AGTTTTGTGCTGTGAAGACGTCGCCAAAGCCGCCGGAGCCGGACCCGTTC
GAGCCGTTCCACACGGCAGAGGCAATCTCGAGGTGGGGAATCGATTACGT
CGTGCTGACGTCGGTAGATCGCGACGACCTTGTGGACGGCGGGTCCAACC
ACTTCGCCACGACGGTGGAGCTCATCAAGGCCGCCAAACCGGAGATGCTC
GTCGAGTGCCTGGTCAGCGATTTCAGAGGGAGCTTCGCTTCCGTCGATCG
ATTAGCCACGTCCGGCCTCGACGTTTACGCGCACAATATCGAGACTGTGA
GGCGACTGCAACCCTACGTCCGCGACAAAAGGGCTGGCTACGACCAATCG
TTGTCCGTGCTTGATAGGGCCAAGGTTGCCGGGAAGAAGGCGGGGGTCTA
CACAAAAACTTCGCTCATGTTAGGATTGGGAGAGACGGAGGAGGAGATAG
TAGAGACCATGCGGGATCTCCGAGAGGCCGGAGTGGACGTGCTGACCCTG
GGCCAATATCTGAGACCCACAGACCACCACTTGGCAGTTGTGGAGTACGT
TACACCCGCAAAGTTCGACCAGTACGCCAAAATGGGTGAAGCGTTAGGCT
TCAGTTACGTTGCGAGCGGGCCAATGGTGCGCTCGTCCTATAAGGCCGGC
GAGTTCTTCATAGAAAATATGATTCGCCGGGGCCGGCAGGAAGAGGAGAA
CATCGTGTCCAAAGCTATGGCAGCAGCTTCGGCGCTTGACCCGAATGACC
GCTAG
back to top