mRNA_P-littoralis_Contig804.19.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig804.19.1
Unique NamemRNA_P-littoralis_Contig804.19.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig804.19.1 vs. uniprot
Match: A0A6H5KRZ8_9PHAE (DDE-1 domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRZ8_9PHAE)

HSP 1 Score: 228 bits (580), Expect = 1.470e-64
Identity = 169/502 (33.67%), Postives = 235/502 (46.81%), Query Frame = 1
Query:    4 FTLRRVSGKSGRCAYENAQKLEVLKFSRLTCG-DGHPVGRRGAGKVFGIDKKLIRDWESQEAEL-VAFSKKENASKQRSLHTGREADTKEVEVAIVDEINTLRKNGAAVTRDLVMAKLLSEMPTFSGGMPSQDEPEKMEKFQKRFNAWYYRFLKRHRFSIRRKTSVGQKKPEGWEGKAWAFIQKLRSSLREHAQEA------------------------------IFALLYNMDQTPIQAEMPPDTTVEKTGTKSACITTGGETVTVRTAVSPVPSNYRYTAMKLFI-------------------------WCV---------------------FVFYYYLF------SWCDRTQSDEWVTQDFMRRPGSTSR-DQRPSVLVLDDFRCHREERFQKKLMDLAKTLVVMLGGRADPGVPAARPEHQQ------GVQARCSGQ-VHQLDPGQLRALGAEGDRAEQGLVATWVKEVWDNISERTIRSCFKVCGLTLNLDGSE 1233
            F + R     G+ +Y    KL    ++R  C  DG PVG  GA  V  +  K I +W  QE +L    S     SK + +H+G +A T + E A+VD +N  RK         VM KLL   P   GGM +  +PE+   F+ +FN+WY RF KR+ FSIRR+TSVGQK P+G+EG AWA + KLR +L + A E                               +F  L NMDQTP+Q EMP +TT+EKTG K A I+TGGE     T V  V ++ +  + ++                           W +                      +F    F      SW D+ + + W+   +  RP + S   QRP +LVLDDF+CH++E F   L   AKT++ + GG      P  R  ++Q      G    CS   V     G+L          E G+V+TW KE W++I+ +T+ +CFK+CGLTL LDGSE
Sbjct:   69 FPIERSGAVEGKGSYPIRFKLNAATYTRKICPCDGQPVGNNGAAIVLQVPWKRIIEWLKQEEQLREKVSANPKLSKAKQVHSGGKASTVDAEQALVDYMNEQRKQHRDCGNREVMNKLLELKPDALGGMSTNAKPEEALAFKVKFNSWYQRFRKRNGFSIRRRTSVGQKLPKGYEGMAWATVMKLREALVKRAGEIYARRHPPAPDESPIKGEDLTSEQLASVEAEVFEELGNMDQTPVQHEMPVETTLEKTGAKDARISTGGEEKERFTLVLAVMADGKKVSPRIIFKGTPFIPPTVSGKVKSTLPRKNSVAWEIHSANXARSGCHGGRQNDVSPRIIFKGTPFIPPTEKSWSDQRECNGWIPGSWKLRPNNGSIVQQRPCILVLDDFKCHKDEGFIAALKRGAKTVIFIPGGLTSLLQPLDRMLNKQMKRLLRGKYTACSASAVADARSGKLNP-------PEHGVVSTWCKEAWESITSKTVETCFKICGLTLALDGSE 563          
BLAST of mRNA_P-littoralis_Contig804.19.1 vs. uniprot
Match: A0A6H5K8Y4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8Y4_9PHAE)

HSP 1 Score: 205 bits (522), Expect = 1.080e-54
Identity = 159/481 (33.06%), Postives = 221/481 (45.95%), Query Frame = 1
Query:   19 VSGKSGRC-AYENAQKLEVLKFSRLTCGDGHPVGRRGAGKVFGIDKKLIRDWESQEAELVA-FSKKENASKQRSLHTGREADTKEVEVAIVDEINTLRKNGAAVTRDLVMAKLLSEMPTFSGGMPSQDEPEKMEKFQKRFNAWYYRFLKRHRFSIRRKTSVGQKKPEGWEGKAWAFIQKLRSSLREHAQEA------------------------------IFALLYNMDQTPIQAEMPPDTTVEKTGTKSACITTGG---ETVTVRTAVSP--------------------VPSNYRYTAMKL--FIWCVFV--------------FYYYLFSWCDRTQSDEWVTQDFMRRP--GSTSRDQRPSVLVLDDFRCHREERFQKKLMDLAKTLVVMLGGRADPGVPAARPEHQQGVQARCSGQVHQLDPGQLRALGAEGDRAEQ---------GLVATWVKEVWDNISERTIRSCFKVCGLTL 1215
             SG  G+   Y    KL+V+ F+R+ C DG P G  GA KV  + ++ I +W   E  L A  S     SK + +H   +A   ++E A+V+ IN  RK+         M KLL   P   GG+ ++ +PE+      +F +WY RF KR++FSIRR+TSVGQK P+G EG AWA + KLR +L E A E                               +F  L NMDQTP+Q EMP +TT+E TG K A I TGG   E  T+  AVS                      P   + T  +     W V                F     SWCD  +   W+   +  RP  GS  R QR  +LVLDDF+CH+++ F   L   A T+V+ + G     +P  +P     +    + Q+ +L  G   A  A+  R  +         G VATW K  W +I+   +++CFK+CGLTL
Sbjct:   46 TSGAVGKKRGYPVGFKLKVVAFTRVVCEDGKPGGNSGAAKVLDVPRRRIVEWVRDEESLRAKVSANPKLSKAKQIHARGKASRADIEEALVEFINDQRKHHVGCGSMAAMNKLLELKPDALGGLAAKPKPEEALALNSKFKSWYQRFCKRNKFSIRRRTSVGQKLPKGHEGMAWATLMKLRKALLERAGEIYAQRYPPAPGESPIRGEDLSSSQLELVTDELFEELGNMDQTPVQHEMPVETTLENTGAKDARIATGGKEKERFTLCLAVSADGKKVPLRIIFKGTPFVPPATPGKGKATQPRKNSIAWEVLPANRSKHGLPVGGMSFGVQEKSWCDLRECKLWIKDSWKLRPNNGSIVR-QRRCILVLDDFKCHKDDGFIAALKREANTIVIFIPGGL---IPLFQP-----LDRMLNKQMKRLLRGMYTAHTAKAARDPKTGKLVPPGRGAVATWCKNAWASITPEIVKTCFKICGLTL 517          
BLAST of mRNA_P-littoralis_Contig804.19.1 vs. uniprot
Match: A0A6H5JQM5_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQM5_9PHAE)

HSP 1 Score: 198 bits (504), Expect = 4.340e-54
Identity = 167/496 (33.67%), Postives = 228/496 (45.97%), Query Frame = 1
Query:    4 FTLRRVSGKSGRCAYENAQKLEVLKFSRLTCGDGHPVGRRGAGKVFGIDKKLIRDWESQEAELVAFSK-KENASKQRSLHTGREADTKEVEVAIVDEINTLRKNGAAVTRDLVMAKLLSEMPTFSGGMPSQDEPEKMEKFQKRFNAWYYRFLKRHRFSIRRKTSVGQKKPEGWEGKAWAFIQKLRSSLREHAQEA------------------------------IFALLYNMDQTPIQAEMPPDTTVEKTGTKSACITTGG---ETVTVRTAV----SPVP--------------------------------------SNYRYTAMKLFIWCVFVFYYYLFSWCDRTQSDEWVTQDFMRRP--GSTSRDQRPSVLVLDDFRCHREERFQKKLMDLAKTLVVMLGGRADPGVPAAR---PEHQQGVQARCSGQVHQL--DP--GQLRALGAEGDRAEQGLVATWVKEVWDNISERTIRSCFKVCGLTLNLDGSED 1236
            F   R  GK G  +Y    KL+ + F+R+ C DG PVG  GA KV  +D++ I  W  +EA +    K K   SK +S+H G    T EVE  + D IN  R+         VM KLL   P   GG+ +    E+   F+ +F  WY+RF +RH  SIRR+TSVGQK P G+EG A+A + KLR++L E A E                               +F  L NMDQTP+Q EMP +TT+EK G K A I+TGG   E  T+  AV      VP                                      +N+ Y    +       F     SW D  +   W+++ +  RP  GS  + QR S+LVLDDFR +              T++++ GG      P  R    E ++ ++ R +  +     DP  G+L+  G       +GLV+TW KE W  I+  T++ CFKVCGLTL LDGSED
Sbjct:   63 FAKERTGGKKG--SYPMRFKLKAVAFTRVLCEDGQPVGNSGAAKVLAVDRRRIITWVGEEATMKNLVKEKPKLSKAKSIHAGVAPPTAEVEQDLEDYINEQRREHRGCGSMEVMNKLLELKPDALGGLTAAASAEETLAFRTKFKNWYHRFRERHGLSIRRRTSVGQKLPTGYEGLAFATLMKLRTALLERAGEIYARRNPPASGESPIKGKDLSPAQLESVATEVFEELGNMDQTPVQQEMPVETTLEKGGAKDARISTGGKEKERFTLCLAVMADGGKVPLRIIFKGKPFIPPSTARRGKNTQPRKGSIAAEVLPANQTNFGYPVSGM------SFGVQERSWYDACECTLWLSESWGFRPNHGSVIK-QRHSILVLDDFRTNT-------------TVILIPGGLTPLLQPLDRMLDKEMKRLMRRRYTQYMASAIADPKTGKLQPPG-------RGLVSTWCKESWAAITAETVKMCFKVCGLTLALDGSED 529          
BLAST of mRNA_P-littoralis_Contig804.19.1 vs. uniprot
Match: A0A6H5JHT8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHT8_9PHAE)

HSP 1 Score: 199 bits (507), Expect = 5.820e-54
Identity = 150/454 (33.04%), Postives = 220/454 (48.46%), Query Frame = 1
Query:  100 DGHPVGRRGAGKVFGIDKKLIRDWESQEAEL-VAFSKKENASKQRSLHTGREADTKEVEVAIVDEINTLRKNGAA-VTRDLVMAKLLSEMPTFSGGMPSQDEPEKMEKFQKRFNAWYYRFLKRHRFSIRRKTSVGQKKPEGWEGKAWAFIQKLRSSLREHAQEA------------------------------IFALLYNMDQTPIQAEMPPDTTVEKTGTKSACITTGGETVTVR-TAVSPVPSNYRYTAMKL-FIWCVFV--------------------------------------FYYYLFSWCDRTQSDEWVTQDFMRRPGSTSR-DQRPSVLVLDDFRCHREERFQKKLMDLAKTLVVMLGGRADPGV-PAARPEHQQGVQARCSGQVHQLDPGQLR-ALGAEGDRAEQGLVATWVKEVWDNISERTIRSCFKVCGLTLNLDGSED 1236
            DG PVG  GA KV  + +K I +W   EA+L    S     SK + +H+G +  T + E      ++      A  +    VM KLL   P   GGMP+  +PE+   F+ +FN+WY RF KR+ FSIRR+TSVGQK P+G+EG AWA + KL  +L + A E                               +F  + NMDQ P+Q EMP +TT++KTG K A I+TGG     R T V  V ++ +  + ++ F    F+                                      F     SW D+ + + W++  +  RP + S   QRP +LVLDDF+CH +E F   L   A T+V+ + G   P + P  R  ++Q ++    G+     P  +  A   +    E+G+V+TW KE W++I+  T+++C K+CGLTL LDGSED
Sbjct:  113 DGQPVGNNGAAKVLQVPRKRIIEWLKPEAQLREKVSANPKLSKAKQVHSGGKVSTVDAEQPFPCGLHQRATQAAPRLGNREVMNKLLELKPDALGGMPANAKPEEAIDFKFKFNSWYQRFRKRNGFSIRRRTSVGQKLPKGYEGMAWATVMKLCEALVKRAGEIYARRHPPAPDESPIKGEDLNSEQLASVEAEVFEEVGNMDQMPVQHEMPVETTLDKTGAKDARISTGGGNEKERFTLVLAVTADGKKVSPRIIFEGTPFIPPTVSGKGKSTRPRKNPVAWEMHPANRAKHGHPANGMSFGVQEKSWSDQRECNGWISGSWKLRPNNGSIVQQRPRILVLDDFKCHNDEGFIAALKRDANTIVIFIPGGLTPLLQPLDRMLNKQ-MKRLLRGKYTAYSPSAVADARSGKLKPPERGVVSTWCKEAWESITPETVKTCSKICGLTLALDGSED 565          
BLAST of mRNA_P-littoralis_Contig804.19.1 vs. uniprot
Match: A0A6H5JTG5_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTG5_9PHAE)

HSP 1 Score: 197 bits (502), Expect = 1.100e-53
Identity = 151/456 (33.11%), Postives = 215/456 (47.15%), Query Frame = 1
Query:  112 VGRRGAGKV-FGIDKKLIRDWESQEAEL-VAFSKKENASKQRSLHTGREADTKEVEVAIVDEINTLRKNGAAVTRDLVMAKLLSEMPTFSGGMPSQDEPEKMEKFQKRFNAWYYRFLKRHRFSIRRKTSVGQKKPEGWEGKAWAFIQKLRSSLREHAQEA------------------------------IFALLYNMDQTPIQAEMPPDTTVEKTGTKSACITTGGETVTVRTAVSPVPSNYRYTAMKLFI-------------------------WCV--------------FVFYYYLFSWCDRTQSDEWVTQDF--------MRRPGSTSR-DQRPSVLVLDDFRCHREERFQKKLMDLAKTLVVMLGGRADPGV-PAARPEHQQGVQARCSGQVHQLDPGQLRALGAEGDRAEQGLVATWVKEVWDNISERTIRSCFKVCGLTLNLDGSED 1236
            VG +G+  +   + +K I +W  QE +L    S     SK + +H+G +A T + E A+VD IN  RK         VM KLL   P   GGMP+  +PE+   F+ +FN+WY RF KR+ FSIRR+ SVGQK P+G+EG AWA + KLR +L + A E                               +F  L NMDQTP+Q EMP +TT+E TG K A I+TGG+     T V  V ++ +  +  +                           W V                F     SW  + + + W+   +        M RP + S   QRP +LVLDDF+CH++E F   L   A T+V+ + G   P + P  R  ++Q  +           P    A   +    E+G+V+TW KE W+ ++  T+ +CFK+CGLTL LDGSED
Sbjct:   77 VGGKGSYPIRLQVPRKRIIEWLKQEGQLREKVSANPKLSKAKQVHSGGKASTVDAEQALVDYINEQRKLHRGCGNREVMNKLLELKPDALGGMPANAKPEEALAFKVKFNSWYQRFRKRNGFSIRRRASVGQKLPKGYEGMAWATVTKLREALVKRAGEIYARRHPPAPDESPIKGEDLTSEQPASVEAEVFEELGNMDQTPVQHEMPVETTLEDTGGKDARISTGGKEKERFTLVLAVMADGKMVSPCIIFKGTPFIPPTVSGKGKSTLPRKNSVAWEVHPANRAKHGHPANGMSFGVQEKSWSGQQECNGWIPGSWKLCPNNGSMXRPNNGSIVQQRPCILVLDDFKCHKDEGFIAALNRDANTIVIFIPGGLTPLLQPLDRMLNKQMKRLLRGKYTAYSAPAVADARSGKLKPPERGVVSTWCKEAWEFVTSETVNTCFKICGLTLALDGSED 532          
BLAST of mRNA_P-littoralis_Contig804.19.1 vs. uniprot
Match: A0A6H5KE45_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KE45_9PHAE)

HSP 1 Score: 191 bits (486), Expect = 1.130e-51
Identity = 152/467 (32.55%), Postives = 210/467 (44.97%), Query Frame = 1
Query:  160 IRDWESQEAELVAFSKKENASKQRSLHTGREADTKEVEVAIVDEINTLRKNGAAVTRDLVMAKLLSEMPTFSGGMPSQDEPEKMEKFQKRFNAWYYRFLKRHRFSIRRKTSVGQKKPEGWEGKAWAFIQKLRSSLREHAQEA------------------------------IFALLYNMDQTPIQAEMPPDTTVEKTGTKSACITTGGETVTVRTAVSPVPSNYRYTAMKL----------FIWCVFV---------------------------------------------------------FYYYLFSWCDRTQSDEWVTQDFMRRP--GSTSRDQRPSVLVLDDFRCHREERFQKKLMDLAKTLVVMLGGRADPGVPAARPEHQQGVQARCSGQVHQLDPGQLRALGAEGDRAEQ---------GLVATWVKEVWDNISERTIRSCFKVCGLTLNLDGSED 1236
            +RD ES  A + A  K    SK + +H G +A T ++E A+V+ IN  RK+        VM KLL   P   GG+ ++ +PE+   F+ +F +WY RF KR++FSIRR+TSVG + P+G EG AWA + KLR +L E A E                               +F  L NMDQTP+Q EMP +TT+EKTG K A I TG     +RT + P+P  Y  T+  L          F  C+ V                                                         F     SWCD  +   W+   +  RP  GS  R QR  +LVLDDF+CH+++ F   L   A T+V+ + G   P +        Q +    + Q+ +L  G   A  A+  R  +         G VATW K  W +I+  T+++CFK+CGLTL LDGSED
Sbjct:   31 VRDEESLRANVSANPK---LSKAKQIHAGGKASTADIEEALVEFINDQRKHHVGCGSMAVMNKLLELKPDTLGGLTAKPKPEEALAFKSKFKSWYQRFRKRNKFSIRRRTSVGIRLPKGHEGMAWATLMKLRKALLERAGEIYAQRYPPAPGESPIRGEDLSSSQLELVTDELFKDLGNMDQTPVQYEMPVETTLEKTGAKDARIATGAGVCCIRTILKPLP--YPPTSCILPPPPGKEKERFTLCLAVSADGTKVPLRIIFKGTPFVPPATPGKGKATQPRKNSIAWEVLPANRSKHGLPVGGMSFGVQEKSWCDLREYKLWIKDSWKLRPNNGSVVR-QRRCILVLDDFKCHKDDGFIAALKREANTIVIFIPGGLTPLL--------QPLDRMLNKQMKRLLRGMYTAHTAKAARDPKTGKLAPPGRGAVATWCKNAWASITPETVKTCFKICGLTLALDGSED 483          
BLAST of mRNA_P-littoralis_Contig804.19.1 vs. uniprot
Match: A0A6H5KVR1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVR1_9PHAE)

HSP 1 Score: 183 bits (464), Expect = 3.730e-48
Identity = 147/460 (31.96%), Postives = 205/460 (44.57%), Query Frame = 1
Query:   25 GKSGRCAYENAQKLEVLKFSRLTCGDGHPVGRRGAGKVFGIDKKLIRDWESQEAELVA-FSKKENASKQRSLHTGREADTKEVEVAIVDEINTLRKNGAAVTRDLVMAKLLSEMPTFSGGMPSQDEPEKMEKFQKRFNAWYYRFLKRHRFSIRRKTSVGQKKPEGWEGKAWAFIQKLRSSLREHAQEA------------------------------IFALLYNMDQTPIQAEMPPDTTVEKTGTKSACITTGGETVTVRTA--VSPV-PSNYRYTAMKL--FIWCVFV--------------FYYYLFSWCDRTQSDEWVTQDFMRRPGSTSRDQRPSVLVLDDFRCHREERFQKKLMDLAKTLVVMLGGRADPGV-PAARPEHQQGV-----QARCSGQVHQLDPGQLRALGAEGDRAEQGLVATWVKEVWDNISERTIRSCFKVCGLTLNLDGSED 1236
            GK G  +Y    KL+ + F+R+ C DG PV   GA KV  + ++ I +W   E  L A  S     SK + +H G +A T ++E A+V+ IN  RK+     +                      +PE    F+ +F +WY RF KR++ SIRR+ SV QK P+G EG AW  + KLR +L E A E                               +F  L NMDQTP+Q EMP +TT+EKTG K A I TGG     +    VSP  P   + T  +     W V                F     SWCD  +   W+   +  RP + S              CH+++ F   L   A T+V+ + G   P + P  R  ++Q +      A  +  V     G+L   G       +G VATW K  W +I+  T+++CFK+CGLTL LDGSED
Sbjct:  125 GKKG--SYPVGSKLKAVAFTRVVCEDGKPVRNSGAAKVLVVLRRRIVEWVRDEESLRANVSANPKLSKAKQIHAGGKASTADIEEALVEFINDQRKHHVGCAKP---------------------KPEGALAFKSKFKSWYQRFRKRNKLSIRRRISVDQKLPKGHEGMAWTTLMKLRKALLERAGEIYAQRYPPAPGESPIRGEDLSSSQLELVTDELFEELGNMDQTPVQHEMPVETTLEKTGVKDARIATGGPAAHFKGTPFVSPATPGKGKATQPRKNSIAWEVLPANRSKHGLPVGGMSFGVQEKSWCDLRECKLWIKDSWELRPNNGSI-------------CHKDDGFIAALKREASTIVIFIPGGLTPLLQPLDRMLNKQRLLRGMYTAHTAKAVRDPKTGKLAPPG-------RGAVATWCKNAWASITPETVKTCFKICGLTLALDGSED 541          
BLAST of mRNA_P-littoralis_Contig804.19.1 vs. uniprot
Match: A0A6H5K6L9_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6L9_9PHAE)

HSP 1 Score: 177 bits (450), Expect = 2.430e-47
Identity = 128/377 (33.95%), Postives = 185/377 (49.07%), Query Frame = 1
Query:  340 MAKLLSEMPTFSGGMPSQDEPEKMEKFQKRFNAWYYRFLKRHRFSIRRKTSVGQKKPEGWEGKAWAFIQKLRSSLREHAQEA------------------------------IFALLYNMDQTPIQAEMPPDTTVEKTGTKSACITTGGETVTVRTAVSPVPSNYRYTAMKLFI-------------------------WCV--------------FVFYYYLFSWCDRTQSDEWVTQDFMRRPGSTSR-DQRPSVLVLDDFRCHREERFQKKLMDLAKTLVVMLGGRADPGV-PAARPEHQQGVQ-------ARCSGQVHQLDPGQLRALGAEGDRAEQGLVATWVKEVWDNISERTIRSCFKVCGLTLNLDGSED 1236
            M KLL   P   GGMP+  +PE+   F+ +FN+WY RF KR+ FSIRR+TSVGQK P+G EG AWA + KLR +L + A E                               +F  L NMDQTP+Q E+P +TT+EKTG K A I+TGG+     T V  V ++ +  + ++                           W +                F     SW D+ + + W++  +  RP + S   QRP +LVLDDF+CH++E F   L   A T+V+ + GR  P + P  R  ++Q  +       A  +  V     G+L+         E+G+V+TW KE W++ +  T+++CF +CGLTL LDGSED
Sbjct:    1 MNKLLELKPDALGGMPANAKPEEALAFKVKFNSWYQRFRKRNGFSIRRRTSVGQKLPKGDEGMAWATVMKLREALVKRAGEIYARRHPPAPDESPIKGEDLTSEQLASVEAEVFEELGNMDQTPVQHEIPVETTLEKTGAKDARISTGGKEKERFTLVLAVMADGKKVSPRIIFKGTPFTPPTVSGKGKSTLPRKNSVAWEIHPANRAKHGHPANGMSFGVQEKSWSDQRECNGWISGSWKLRPNNGSIVQQRPCILVLDDFKCHKDEGFIAALKRDANTIVIFIPGRLTPLLQPLDRMLNKQMKRLLRRKYTAYSASAVADARSGKLKP-------PERGVVSTWCKEAWESSTPETVKTCFMICGLTLALDGSED 370          
BLAST of mRNA_P-littoralis_Contig804.19.1 vs. uniprot
Match: A0A6H5KEE8_9PHAE (DDE-1 domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEE8_9PHAE)

HSP 1 Score: 177 bits (450), Expect = 1.880e-46
Identity = 142/461 (30.80%), Postives = 200/461 (43.38%), Query Frame = 1
Query:   25 GKSGRCAYENAQKLEVLKFSRLTCGDGHPVGRRGAGKVFGIDKKLIRDWESQEAELVA-FSKKENASKQRSLHTGREADTKEVEVAIVDEINTLRKNGAAVTRDLVMAKLLSEMPTFSGGMPSQDEPEKMEKFQKRFNAWYYRFLKRHRFSIRRKTSVGQKKPEGWEGKAWAFIQKLRSSLREHAQEA------------------------------IFALLYNMDQTPIQAEMPPDTTVEKTGTKSACITTGGETVTVRTAVSPVPSNYRYTAMK---------LFIWCVFV--------------FYYYLFSWCDRTQSDEWVTQDFMRRP--GSTSRDQRPSVLVLDDFRCHREERFQKKLMDLAKTLVVMLGGRADPGVPAA-RPEHQQGVQARCSGQVHQLDPGQLRALGAEGDRAEQGLVATWVKEVWDNISERTIRSCFKVCGLTLNLDGSED 1236
            GK G  +Y    KL+ + F+R+ C DG PVG  GA KV  + ++ I +W   E  L A  S     SK + +H G +A T ++E A+V+ IN  RK+       L                           F+ +F +WY RF KR++F+IRR+TSVGQK P+G EG AWA + KLR +L E A E                               +F  L NMDQTP+Q E       ++  T    ++  G+ V +R      P     T  K            W V                F     SWCD  +   W+   +  RP  GS  R QR  +LVLDDF+CH+++ F   L   A T+V+ + G   P +    R  ++Q  +                    +     +G VATW K  W +I+  T+++CFK+CGLTL LDGSED
Sbjct:   64 GKKG--SYPVGFKLKAVAFTRVVCEDGKPVGNSGAAKVLDVPRRRIVEWVRDEESLRANVSANPKLSKAKQIHAGGKASTADIEEALVEFINDQRKHHVGCEEALA--------------------------FKSKFKSWYQRFRKRNKFNIRRRTSVGQKLPKGHEGMAWATLMKLRKALLERAGEIYAQRYPPAPGESPIRGEDLSSSQLELVTDELFEELGNMDQTPVQHERDAGGKEKERFTLCLAVSADGKKVPLRIIFKGTPFVPPATPGKGKATQPRKNSIAWEVLPANRSKHGLPVEGMSFGVQEKSWCDLRECKLWIKGSWKLRPNNGSIVR-QRRCILVLDDFKCHKDDGFIAALKREANTIVIFIPGGLTPLLQLLDRMLNKQMKRLLXXXXXXXXXXXXXXPKTGKLAPPGRGAVATWCKNAWASITPETVKTCFKICGLTLALDGSED 495          
BLAST of mRNA_P-littoralis_Contig804.19.1 vs. uniprot
Match: A0A6H5KYG9_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYG9_9PHAE)

HSP 1 Score: 177 bits (449), Expect = 3.700e-46
Identity = 144/418 (34.45%), Postives = 196/418 (46.89%), Query Frame = 1
Query:  226 QRSLHTGREADTKEVEVAIVDEINTLRKNGAAVTRDLVMAKLLSEMPTFSGGMPSQDEPEKMEKFQKRFNAWYYRFLKRHRFSIRRKTSVGQKKPEGWEGKAWAFIQKLRSSLREHAQEA------------------------------IFALLYNMDQTPIQAEMPPDTTVEKTGTKSACITTG-GET---------VTVRTAVSPVPSNYRY-----------------------------TAMKLFI-WCVFVFYYYLFSWCDRTQSDEWVTQDFMRRP--GSTSRDQRPSVLVLDDFRCHREERFQKKLMDLAKTLVVMLGGRADPGVPAARPEHQQGVQARCSGQVHQLDPGQLRALGAEGDRAEQ---------GLVATWVKEVWDNISERTIRSCFKVCGLTLNLDGSED 1236
            +RS   G++AD   +E A+V+ IN  RK+        VM KLL   P   GG+ ++ +PE+   F+ +F +WY RF KR++FSIRR+TSVGQK P+G EG AWA + KLR +L E A E                               +F  L NMDQTP+Q EMP +TT+EK G K A I TG GE          +  R A S + S+ R                              TA      W          SWCD  +   W+   +  RP  GS  R QR  +LVLDDF+CH+++ F   L   A T+V+ + G   P +        Q +    + Q+ +L  G   A  A+  R  +         G VATW K  W +I+  T+++CFK+CGLTL LDGSED
Sbjct:  115 ERSGAVGKKAD---IEEALVEFINDQRKHHVGCGSMAVMNKLLELKPDALGGLTAKPKPEEALAFKSKFKSWYQRFRKRNKFSIRRRTSVGQKLPKGHEGMAWATLMKLRKALLERAGEIYAQRYPPAPGESPIRGEDLSSSQLELVTDELFEELGNMDQTPVQHEMPVETTLEKAGAKDARIATGAGEKRRNASRSAWLPRRMARSRLASSSRVRLSFRLPRPGXXXXXXXXXXXXXXXYFPRTAPSTGSPWEACPSGVQEKSWCDLRECKLWIKDSWKLRPNNGSIVR-QRRCILVLDDFKCHKDDGFIAALNKEANTIVIFIPGGLTPLL--------QPLDRMLNKQMKRLLRGMYTANTAKAARDPKTGNLAPPGRGAVATWCKNAWASITPETVKTCFKICGLTLALDGSED 520          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig804.19.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KRZ8_9PHAE1.470e-6433.67DDE-1 domain-containing protein n=3 Tax=Ectocarpus... [more]
A0A6H5K8Y4_9PHAE1.080e-5433.06Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JQM5_9PHAE4.340e-5433.67DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5JHT8_9PHAE5.820e-5433.04Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JTG5_9PHAE1.100e-5333.11DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5KE45_9PHAE1.130e-5132.55DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5KVR1_9PHAE3.730e-4831.96Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K6L9_9PHAE2.430e-4733.95DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5KEE8_9PHAE1.880e-4630.80DDE-1 domain-containing protein n=2 Tax=Ectocarpus... [more]
A0A6H5KYG9_9PHAE3.700e-4634.45DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig804contigP-littoralis_Contig804:59245..60891 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog8364.ENSXETP00000039644
Preferred namePOGK
PFAMsBrkDBD,DDE_1,HTH_Tnp_Tc5
Model size1236
Max annot lvl33208|Metazoa
Hectar predicted targeting categoryother localisation
Exons4
Evalue1.15e-28
EggNOG OGsKOG3105@1|root,KOG3105@2759|Eukaryota,38I47@33154|Opisthokonta,3BMCH@33208|Metazoa,3CYY1@33213|Bilateria,48700@7711|Chordata,4949I@7742|Vertebrata
Descriptionpogo transposable element with KRAB domain
Cds size1236
COG categoryBD
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680791652.571285-CDS-P-littoralis_Contig804:59244..598291680791652.571285-CDS-P-littoralis_Contig804:59244..59829Pylaiella littoralis U1_48CDSP-littoralis_Contig804 59245..59829 +
1680791652.5871265-CDS-P-littoralis_Contig804:59934..600531680791652.5871265-CDS-P-littoralis_Contig804:59934..60053Pylaiella littoralis U1_48CDSP-littoralis_Contig804 59935..60053 +
1680791652.6068208-CDS-P-littoralis_Contig804:60229..602981680791652.6068208-CDS-P-littoralis_Contig804:60229..60298Pylaiella littoralis U1_48CDSP-littoralis_Contig804 60230..60298 +
1680791652.6176693-CDS-P-littoralis_Contig804:60428..608911680791652.6176693-CDS-P-littoralis_Contig804:60428..60891Pylaiella littoralis U1_48CDSP-littoralis_Contig804 60429..60891 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig804.19.1prot_P-littoralis_Contig804.19.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig804 59245..60891 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig804.19.1

>prot_P-littoralis_Contig804.19.1 ID=prot_P-littoralis_Contig804.19.1|Name=mRNA_P-littoralis_Contig804.19.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=412bp
PFTLRRVSGKSGRCAYENAQKLEVLKFSRLTCGDGHPVGRRGAGKVFGID
KKLIRDWESQEAELVAFSKKENASKQRSLHTGREADTKEVEVAIVDEINT
LRKNGAAVTRDLVMAKLLSEMPTFSGGMPSQDEPEKMEKFQKRFNAWYYR
FLKRHRFSIRRKTSVGQKKPEGWEGKAWAFIQKLRSSLREHAQEAIFALL
YNMDQTPIQAEMPPDTTVEKTGTKSACITTGGETVTVRTAVSPVPSNYRY
TAMKLFIWCVFVFYYYLFSWCDRTQSDEWVTQDFMRRPGSTSRDQRPSVL
VLDDFRCHREERFQKKLMDLAKTLVVMLGGRADPGVPAARPEHQQGVQAR
CSGQVHQLDPGQLRALGAEGDRAEQGLVATWVKEVWDNISERTIRSCFKV
CGLTLNLDGSED
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mRNA from alignment at P-littoralis_Contig804:59245..60891+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig804.19.1 ID=mRNA_P-littoralis_Contig804.19.1|Name=mRNA_P-littoralis_Contig804.19.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=1647bp|location=Sequence derived from alignment at P-littoralis_Contig804:59245..60891+ (Pylaiella littoralis U1_48)
CCGTTCACACTGCGGCGAGTATCTGGAAAGAGCGGGCGGTGCGCATACGA GAACGCGCAGAAGCTCGAGGTGCTGAAGTTCAGCCGGCTAACGTGTGGTG ATGGGCACCCAGTCGGAAGGCGTGGTGCGGGGAAGGTGTTCGGCATCGAC AAGAAGCTGATCCGGGACTGGGAGAGCCAGGAGGCAGAGCTTGTGGCGTT TTCGAAGAAGGAGAACGCAAGCAAGCAGCGGTCGTTGCACACTGGACGCG AGGCTGACACGAAGGAGGTGGAGGTGGCCATAGTGGACGAGATCAACACG CTCAGGAAAAACGGTGCTGCTGTGACCCGGGACCTCGTCATGGCCAAGCT TCTCTCCGAGATGCCAACCTTTTCAGGGGGCATGCCGTCCCAAGACGAGC CGGAGAAGATGGAAAAATTTCAGAAGCGTTTCAACGCCTGGTACTACAGG TTCCTCAAGAGGCACCGGTTCTCGATCCGACGCAAGACGAGCGTGGGGCA GAAGAAGCCGGAAGGATGGGAGGGCAAGGCGTGGGCATTCATCCAGAAGC TTCGCTCAAGCCTGCGTGAGCACGCGCAGGAAGCCGTTCTCTTGGAGAGG GCAGCCCAGGCAGCGAAGGACGGAGGGACCGTTGAGATCGAGATGGACGT CATCGCAACTGCGGAGGAACTTCTGGCTGTTCAGGGCAAGATCTTCGCCC TTCTGTACAACATGGACCAGACCCCGATCCAGGCTGAGATGCCGCCGGAC ACCACGGTGGAGAAGACTGGTACGAAGAGCGCTTGCATCACGACAGGAGG TGAGACGGTGTACTAAAGGTATTTCGATTGTTGAAATTCAGTTCAAACCA ACATGGTGGAGATTTTCTGACGATGGAACAAGTGGGGAATTACAAATTTG CCGACGGCGGAAAAACGGGGAATTATAATATTTTGCATTGCTTCTGCCGT CACGTGCACGCTTTCGTTCTTCTATTGCCTGCAAGTACGGTACGTACTGC TGTATCGCCTGTCCCTTCGAACTACCGGTACACAGCGATGAAATTATTCA TATGGTATTCCGCTGAAGTATTTTTTTTAATATACATATGTTTTGGGGGC AATATATATTTTACCGTATACACCGGAGTTTGTTTTTATTTTACTTTTTA TGTTGTGGTAGGCATTACACCCCAGGAGTTAAAGGTGTGTGTTTGTTTTT TATTATTATTTATTTTCGTGGTGCGACCGCACCCAGTCCGACGAGTGGGT AACCCAGGACTTCATGCGCCGCCCAGGGTCTACCTCCAGAGATCAGCGTC CCAGCGTTCTCGTGCTCGACGACTTCAGGTGCCACCGGGAAGAGAGGTTC CAAAAGAAGCTAATGGACCTGGCCAAGACGCTGGTGGTGATGCTTGGTGG GAGGGCTGACCCCGGTGTGCCAGCCGCTCGACCGGAACATCAACAAGGAG TTCAAGCGAGGTGTTCGGGCCAGGTACACCAGCTGGATCCGGGACAACTA CGGGCGCTCGGGGCAGAAGGTGACCGCGCCGAGCAGGGGCTGGTCGCGAC GTGGGTAAAGGAGGTGTGGGACAACATCTCGGAGCGGACCATCCGCTCGT GCTTCAAGGTCTGCGGTCTCACCCTCAACCTCGACGGAAGCGAGGAC
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Coding sequence (CDS) from alignment at P-littoralis_Contig804:59245..60891+

>mRNA_P-littoralis_Contig804.19.1 ID=mRNA_P-littoralis_Contig804.19.1|Name=mRNA_P-littoralis_Contig804.19.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1236bp|location=Sequence derived from alignment at P-littoralis_Contig804:59245..60891+ (Pylaiella littoralis U1_48)
CCGTTCACACTGCGGCGAGTATCTGGAAAGAGCGGGCGGTGCGCATACGA
GAACGCGCAGAAGCTCGAGGTGCTGAAGTTCAGCCGGCTAACGTGTGGTG
ATGGGCACCCAGTCGGAAGGCGTGGTGCGGGGAAGGTGTTCGGCATCGAC
AAGAAGCTGATCCGGGACTGGGAGAGCCAGGAGGCAGAGCTTGTGGCGTT
TTCGAAGAAGGAGAACGCAAGCAAGCAGCGGTCGTTGCACACTGGACGCG
AGGCTGACACGAAGGAGGTGGAGGTGGCCATAGTGGACGAGATCAACACG
CTCAGGAAAAACGGTGCTGCTGTGACCCGGGACCTCGTCATGGCCAAGCT
TCTCTCCGAGATGCCAACCTTTTCAGGGGGCATGCCGTCCCAAGACGAGC
CGGAGAAGATGGAAAAATTTCAGAAGCGTTTCAACGCCTGGTACTACAGG
TTCCTCAAGAGGCACCGGTTCTCGATCCGACGCAAGACGAGCGTGGGGCA
GAAGAAGCCGGAAGGATGGGAGGGCAAGGCGTGGGCATTCATCCAGAAGC
TTCGCTCAAGCCTGCGTGAGCACGCGCAGGAAGCCATCTTCGCCCTTCTG
TACAACATGGACCAGACCCCGATCCAGGCTGAGATGCCGCCGGACACCAC
GGTGGAGAAGACTGGTACGAAGAGCGCTTGCATCACGACAGGAGGTGAGA
CGGTTACGGTACGTACTGCTGTATCGCCTGTCCCTTCGAACTACCGGTAC
ACAGCGATGAAATTATTCATATGGTGTGTGTTTGTTTTTTATTATTATTT
ATTTTCGTGGTGCGACCGCACCCAGTCCGACGAGTGGGTAACCCAGGACT
TCATGCGCCGCCCAGGGTCTACCTCCAGAGATCAGCGTCCCAGCGTTCTC
GTGCTCGACGACTTCAGGTGCCACCGGGAAGAGAGGTTCCAAAAGAAGCT
AATGGACCTGGCCAAGACGCTGGTGGTGATGCTTGGTGGGAGGGCTGACC
CCGGTGTGCCAGCCGCTCGACCGGAACATCAACAAGGAGTTCAAGCGAGG
TGTTCGGGCCAGGTACACCAGCTGGATCCGGGACAACTACGGGCGCTCGG
GGCAGAAGGTGACCGCGCCGAGCAGGGGCTGGTCGCGACGTGGGTAAAGG
AGGTGTGGGACAACATCTCGGAGCGGACCATCCGCTCGTGCTTCAAGGTC
TGCGGTCTCACCCTCAACCTCGACGGAAGCGAGGAC
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